Guide to the Human Genome
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Name: MRPL34 Sequence: fasta or formatted (92aa) NCBI GI: 13027606
Description:

mitochondrial ribosomal protein L34

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8          9           2
 C cysteine            0.0          0           0
 D aspartate           1.1          1           1
 E glutamate           1.1          1           1
 F phenylalanine       1.1          1           1
 G glycine            12.0         11           2
 H histidine           2.2          2           1
 I isoleucine          2.2          2           1
 K lysine              6.5          6           1
 L leucine            13.0         12           2
 M methionine          2.2          2           1
 N asparagine          3.3          3           1
 P proline             7.6          7           1
 Q glutamine           5.4          5           2
 R arginine           12.0         11           2
 S serine              7.6          7           1
 T threonine           3.3          3           1
 V valine              4.3          4           1
 W tryptophan          4.3          4           1
 Y tyrosine            1.1          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial ribosomal protein L34 
URM1                  0.024   ubiquitin related modifier 1 homolog isoform b [Hom...
LOC100128064          0.018   PREDICTED: hypothetical protein 
LOC100128064          0.018   PREDICTED: hypothetical protein 
LOC100128064          0.018   PREDICTED: hypothetical protein 
ELANE                 0.018   neutrophil elastase preproprotein 
SEC31B                0.018   SEC31 homolog B 
LOC100291071          0.012   PREDICTED: hypothetical protein XP_002346951 
LOC100287198          0.012   PREDICTED: hypothetical protein XP_002342815 
LOC100287198          0.012   PREDICTED: hypothetical protein 
JPH2                  0.012   junctophilin 2 isoform 1 
NCOR2                 0.012   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.012   nuclear receptor co-repressor 2 isoform 1 
LOC100293296          0.006   PREDICTED: hypothetical protein 
TMEM88B               0.006   PREDICTED: hypothetical protein LOC643965 
TMEM88B               0.006   PREDICTED: hypothetical protein LOC643965 
INHBB                 0.006   inhibin beta B subunit preproprotein 
PSTPIP1               0.006   proline-serine-threonine phosphatase interacting pro...
SLC45A4               0.006   solute carrier family 45, member 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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