Guide to the Human Genome
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Name: LOC100128064 Sequence: fasta or formatted (150aa) NCBI GI: 169179313
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {150aa} PREDICTED: hypothetical protein
alt mRNA {150aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         11           2
 C cysteine            4.0          6           1
 D aspartate           2.0          3           1
 E glutamate           2.7          4           2
 F phenylalanine       2.7          4           1
 G glycine             8.7         13           2
 H histidine           3.3          5           1
 I isoleucine          4.7          7           1
 K lysine              7.3         11           2
 L leucine            12.0         18           2
 M methionine          0.7          1           1
 N asparagine          2.0          3           1
 P proline             7.3         11           2
 Q glutamine           6.0          9           2
 R arginine            5.3          8           1
 S serine              8.0         12           2
 T threonine           6.0          9           2
 V valine              3.3          5           1
 W tryptophan          5.3          8           1
 Y tyrosine            1.3          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100128064          1.000   PREDICTED: hypothetical protein 
LOC100128064          0.993   PREDICTED: hypothetical protein 
ZMYND15               0.013   zinc finger, MYND-type containing 15 isoform 1 [Hom...
ZMYND15               0.013   zinc finger, MYND-type containing 15 isoform 2 [Homo...
MRPL34                0.010   mitochondrial ribosomal protein L34 
FLJ22184              0.010   PREDICTED: hypothetical protein FLJ22184 
C2orf16               0.010   hypothetical protein LOC84226 
LOC100294047          0.010   PREDICTED: hypothetical protein 
LOC100291094          0.010   PREDICTED: hypothetical protein XP_002347881 
LOC100289436          0.010   PREDICTED: hypothetical protein XP_002344185 
SLC35F5               0.010   solute carrier family 35, member F5 
WNK2                  0.007   WNK lysine deficient protein kinase 2 
ZAN                   0.007   zonadhesin isoform 3 
ZAN                   0.007   zonadhesin isoform 6 
LOC100128682          0.007   PREDICTED: hypothetical protein LOC100128682 
LOC100128682          0.007   PREDICTED: hypothetical protein LOC100128682 
LOC100128682          0.007   PREDICTED: hypothetical protein LOC100128682 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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