Guide to the Human Genome
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Name: STRADB Sequence: fasta or formatted (418aa) NCBI GI: 13027388
Description:

STE20-related kinase adaptor beta

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         14           1
 C cysteine            1.9          8           1
 D aspartate           3.8         16           1
 E glutamate           5.5         23           2
 F phenylalanine       4.5         19           2
 G glycine             5.0         21           1
 H histidine           4.3         18           1
 I isoleucine          4.8         20           1
 K lysine              3.8         16           1
 L leucine            11.5         48           2
 M methionine          1.7          7           1
 N asparagine          3.1         13           1
 P proline             6.5         27           2
 Q glutamine           5.3         22           2
 R arginine            4.5         19           1
 S serine             13.2         55           2
 T threonine           6.5         27           2
 V valine              6.2         26           1
 W tryptophan          1.7          7           1
 Y tyrosine            2.9         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   STE20-related kinase adaptor beta 
STRADA                0.363   protein kinase LYK5 isoform 4 
STRADA                0.363   protein kinase LYK5 isoform 1 
STRADA                0.363   protein kinase LYK5 isoform 2 
STRADA                0.326   protein kinase LYK5 isoform 3 
OXSR1                 0.146   oxidative-stress responsive 1 
STK39                 0.134   serine threonine kinase 39 (STE20/SPS1 homolog, yea...
STK25                 0.104   serine/threonine kinase 25 
MST4                  0.099   serine/threonine protein kinase MST4 isoform 1 [Homo...
TNIK                  0.099   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.099   TRAF2 and NCK interacting kinase isoform 7 
TNIK                  0.099   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.099   TRAF2 and NCK interacting kinase isoform 5 
TNIK                  0.099   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.099   TRAF2 and NCK interacting kinase isoform 3 
TNIK                  0.099   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.099   TRAF2 and NCK interacting kinase isoform 1 
STK24                 0.097   serine/threonine kinase 24 isoform b 
STK24                 0.097   serine/threonine kinase 24 isoform a 
MAP4K3                0.096   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.096   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.096   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.096   mitogen-activated protein kinase kinase kinase kinas...
MAP4K1                0.092   mitogen-activated protein kinase kinase kinase kina...
MAP4K1                0.092   mitogen-activated protein kinase kinase kinase kinase...
MAP4K5                0.092   mitogen-activated protein kinase kinase kinase kinas...
MAP4K5                0.092   mitogen-activated protein kinase kinase kinase kinas...
MINK1                 0.091   misshapen/NIK-related kinase isoform 4 
MINK1                 0.091   misshapen/NIK-related kinase isoform 2 
MINK1                 0.091   misshapen/NIK-related kinase isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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