Guide to the Human Genome
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Name: STRADA Sequence: fasta or formatted (348aa) NCBI GI: 31982873
Description:

protein kinase LYK5 isoform 3

Referenced in:

Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [431aa] protein kinase LYK5 isoform 1
alt prot [373aa] protein kinase LYK5 isoform 4
alt prot [394aa] protein kinase LYK5 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         19           1
 C cysteine            2.3          8           1
 D aspartate           4.3         15           1
 E glutamate           5.2         18           2
 F phenylalanine       4.0         14           1
 G glycine             6.9         24           2
 H histidine           4.3         15           2
 I isoleucine          4.3         15           1
 K lysine              3.7         13           1
 L leucine            10.1         35           2
 M methionine          3.4         12           1
 N asparagine          4.3         15           1
 P proline             6.0         21           1
 Q glutamine           3.2         11           2
 R arginine            4.3         15           2
 S serine             10.6         37           2
 T threonine           5.5         19           2
 V valine              7.2         25           2
 W tryptophan          0.9          3           1
 Y tyrosine            4.0         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase LYK5 isoform 3 
STRADA                0.936   protein kinase LYK5 isoform 2 
STRADA                0.925   protein kinase LYK5 isoform 1 
STRADA                0.881   protein kinase LYK5 isoform 4 
STRADB                0.392   STE20-related kinase adaptor beta 
STK39                 0.165   serine threonine kinase 39 (STE20/SPS1 homolog, yea...
OXSR1                 0.164   oxidative-stress responsive 1 
STK24                 0.116   serine/threonine kinase 24 isoform b 
STK24                 0.116   serine/threonine kinase 24 isoform a 
STK4                  0.113   serine/threonine kinase 4 
STK25                 0.112   serine/threonine kinase 25 
MST4                  0.110   serine/threonine protein kinase MST4 isoform 1 [Homo...
PAK7                  0.109   p21-activated kinase 7 
PAK7                  0.109   p21-activated kinase 7 
PAK6                  0.107   p21-activated kinase 6 
PAK6                  0.107   p21-activated kinase 6 
PAK6                  0.107   p21-activated kinase 6 
MAP4K3                0.106   mitogen-activated protein kinase kinase kinase kinas...
STK3                  0.104   serine/threonine kinase 3 
PAK3                  0.104   p21-activated kinase 3 isoform d 
PAK3                  0.104   p21-activated kinase 3 isoform c 
PAK3                  0.104   p21-activated kinase 3 isoform b 
PAK3                  0.104   p21-activated kinase 3 isoform a 
PAK3                  0.104   p21-activated kinase 3 isoform a 
PAK3                  0.104   p21-activated kinase 3 isoform a 
PAK1                  0.103   p21-activated kinase 1 isoform 1 
PAK1                  0.103   p21-activated kinase 1 isoform 2 
MAP4K1                0.100   mitogen-activated protein kinase kinase kinase kina...
MAP4K1                0.100   mitogen-activated protein kinase kinase kinase kinase...
MAP4K5                0.099   mitogen-activated protein kinase kinase kinase kinas...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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