Search of human proteins with 4504963

Search of human proteins with 4504963

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4504963 lipocalin 1 precursor [Homo sapiens]
         (176 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4504963 lipocalin 1 precursor [Homo sapiens]                       353   3e-98
gi|7657407 odorant binding protein 2B [Homo sapiens]                  148   3e-36
gi|7657405 odorant binding protein 2A precursor [Homo sapiens]        143   9e-35
gi|4502067 alpha-1-microglobulin/bikunin preproprotein [Homo sap...    57   6e-09
gi|42714611 lipocalin 15 [Homo sapiens]                                45   2e-05
gi|48717447 lipocalin 9 [Homo sapiens]                                 43   1e-04
gi|169177936 PREDICTED: similar to hCG1795014 [Homo sapiens]           42   4e-04
gi|169179152 PREDICTED: similar to hCG1795014 [Homo sapiens]           42   4e-04
gi|169181274 PREDICTED: similar to hCG1795014 [Homo sapiens]           42   4e-04
gi|65507519 glycodelin precursor [Homo sapiens]                        36   0.015
gi|65507501 glycodelin precursor [Homo sapiens]                        36   0.015
gi|62988357 lipocalin 8 [Homo sapiens]                                 33   0.13 
gi|39573716 lipocalin 6 [Homo sapiens]                                 33   0.13 
gi|89886464 lipocalcin 12 [Homo sapiens]                               30   1.4  
gi|57863314 vacuolar protein sorting 37C [Homo sapiens]                29   2.4  
gi|4504067 aspartate aminotransferase 1 [Homo sapiens]                 28   4.1  
gi|89111953 transmembrane protein 132B [Homo sapiens]                  28   4.1  
gi|126116598 lipocalin 10 [Homo sapiens]                               28   5.4  
gi|166706911 interferon-induced, hepatitis C-associated microtub...    28   5.4  
gi|62241024 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 2 [...    27   7.0  

>gi|4504963 lipocalin 1 precursor [Homo sapiens]
          Length = 176

 Score =  353 bits (907), Expect = 3e-98
 Identities = 176/176 (100%), Positives = 176/176 (100%)

Query: 1   MKPLLLAVSLGLIAALQAHHLLASDEEIQDVSGTWYLKAMTVDREFPEMNLESVTPMTLT 60
           MKPLLLAVSLGLIAALQAHHLLASDEEIQDVSGTWYLKAMTVDREFPEMNLESVTPMTLT
Sbjct: 1   MKPLLLAVSLGLIAALQAHHLLASDEEIQDVSGTWYLKAMTVDREFPEMNLESVTPMTLT 60

Query: 61  TLEGGNLEAKVTMLISGRCQEVKAVLEKTDEPGKYTADGGKHVAYIIRSHVKDHYIFYCE 120
           TLEGGNLEAKVTMLISGRCQEVKAVLEKTDEPGKYTADGGKHVAYIIRSHVKDHYIFYCE
Sbjct: 61  TLEGGNLEAKVTMLISGRCQEVKAVLEKTDEPGKYTADGGKHVAYIIRSHVKDHYIFYCE 120

Query: 121 GELHGKPVRGVKLVGRDPKNNLEALEDFEKAAGARGLSTESILIPRQSETCSPGSD 176
           GELHGKPVRGVKLVGRDPKNNLEALEDFEKAAGARGLSTESILIPRQSETCSPGSD
Sbjct: 121 GELHGKPVRGVKLVGRDPKNNLEALEDFEKAAGARGLSTESILIPRQSETCSPGSD 176


>gi|7657407 odorant binding protein 2B [Homo sapiens]
          Length = 170

 Score =  148 bits (373), Expect = 3e-36
 Identities = 80/174 (45%), Positives = 109/174 (62%), Gaps = 7/174 (4%)

Query: 1   MKPLLLAVSLGLIAALQAHHLLASDEEIQDVSGTWYLKAMTVDREFPE-MNLESVTPMTL 59
           MK L L V+LGL AAL        +EE  D++GTWY+KAM VD++FPE      V+P+ +
Sbjct: 1   MKTLFLGVTLGLAAALS----FTLEEE--DITGTWYVKAMVVDKDFPEDRRPRKVSPVKV 54

Query: 60  TTLEGGNLEAKVTMLISGRCQEVKAVLEKTDEPGKYTADGGKHVAYIIRSHVKDHYIFYC 119
           T L GG LEA  T +   RC + K ++ KT+EPGKY+A GG+ + Y+     +DHYIFYC
Sbjct: 55  TALGGGKLEATFTFMREDRCIQKKILMRKTEEPGKYSAYGGRKLMYLQELPRRDHYIFYC 114

Query: 120 EGELHGKPVRGVKLVGRDPKNNLEALEDFEKAAGARGLSTESILIPRQSETCSP 173
           + + HG  +   KLVGR+   N EALE+F+K    +GLS E I  P Q+ +C P
Sbjct: 115 KDQHHGGLLHMGKLVGRNSDTNREALEEFKKLVQRKGLSEEDIFTPLQTGSCVP 168


>gi|7657405 odorant binding protein 2A precursor [Homo sapiens]
          Length = 170

 Score =  143 bits (360), Expect = 9e-35
 Identities = 78/172 (45%), Positives = 108/172 (62%), Gaps = 7/172 (4%)

Query: 1   MKPLLLAVSLGLIAALQAHHLLASDEEIQDVSGTWYLKAMTVDREFPE-MNLESVTPMTL 59
           MK L L V+LGL AAL        +EE  D++GTWY+KAM VD++FPE      V+P+ +
Sbjct: 1   MKTLFLGVTLGLAAALS----FTLEEE--DITGTWYVKAMVVDKDFPEDRRPRKVSPVKV 54

Query: 60  TTLEGGNLEAKVTMLISGRCQEVKAVLEKTDEPGKYTADGGKHVAYIIRSHVKDHYIFYC 119
           T L GGNLEA  T +   RC + K ++ KT+EPGK++A GG+ + Y+      D Y+FYC
Sbjct: 55  TALGGGNLEATFTFMREDRCIQKKILMRKTEEPGKFSAYGGRKLIYLQELPGTDDYVFYC 114

Query: 120 EGELHGKPVRGVKLVGRDPKNNLEALEDFEKAAGARGLSTESILIPRQSETC 171
           + +  G      KLVGR+P  NLEALE+F+K    +GLS E I +P Q+ +C
Sbjct: 115 KDQRRGGLRYMGKLVGRNPNTNLEALEEFKKLVQHKGLSEEDIFMPLQTGSC 166


>gi|4502067 alpha-1-microglobulin/bikunin preproprotein [Homo
           sapiens]
          Length = 352

 Score = 57.4 bits (137), Expect = 6e-09
 Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 10/178 (5%)

Query: 6   LAVSLGLIAALQAHHLLASDEEIQDVSGTWYLKAMTVDREFPEMNLESVTPMTLTTLEGG 65
           LAVS G +     +  +  +  I  + G WY  A+     + +  ++ +T  TL   EG 
Sbjct: 15  LAVSAGPVPTPPDNIQVQENFNISRIYGKWYNLAIGSTCPWLKKIMDRMTVSTLVLGEGA 74

Query: 66  NLEAKVTMLIS----GRCQEVKAVLEKTDEPGKYTADGGKH----VAYIIRSHVKDHYIF 117
             EA+++M  +    G C+E     EKTD  GK+     K      +Y++ ++  ++ IF
Sbjct: 75  T-EAEISMTSTRWRKGVCEETSGAYEKTDTDGKFLYHKSKWNITMESYVVHTNYDEYAIF 133

Query: 118 YCEG-ELHGKPVRGVKLVGRDPKNNLEALEDFEKAAGARGLSTESILIPRQSETCSPG 174
             +    H  P    KL GR P+     L+DF   A   G+  +SI        C PG
Sbjct: 134 LTKKFSRHHGPTITAKLYGRAPQLRETLLQDFRVVAQGVGIPEDSIFTMADRGECVPG 191


>gi|42714611 lipocalin 15 [Homo sapiens]
          Length = 184

 Score = 45.4 bits (106), Expect = 2e-05
 Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 5/180 (2%)

Query: 1   MKPLLLAVSLGLIAA--LQAHHLLASDEEIQDVSGTWYLKAMTVD-REF-PEMNLESVTP 56
           M   LL   L L+ A   QA  LL  D   +  SG WY+ +M  D R F  + +  S++ 
Sbjct: 1   MMSFLLGAILTLLWAPTAQAEVLLQPDFNAEKFSGLWYVVSMASDCRVFLGKKDHLSMST 60

Query: 57  MTLTTLEGGNLEAKVTMLISGRCQEVKAVLEKTDEPGKYTADG-GKHVAYIIRSHVKDHY 115
             +   E G L   +    +  C +V A   K    G +     G     I+ +      
Sbjct: 61  RAIRPTEEGGLHVHMEFPGADGCNQVDAEYLKVGSEGHFRVPALGYLDVRIVDTDYSSFA 120

Query: 116 IFYCEGELHGKPVRGVKLVGRDPKNNLEALEDFEKAAGARGLSTESILIPRQSETCSPGS 175
           + Y   EL G     V+L  R    + +AL+ F+      GL  + +++  QS+ C+P S
Sbjct: 121 VLYIYKELEGALSTMVQLYSRTQDVSPQALKSFQDFYPTLGLPKDMMVMLPQSDACNPES 180


>gi|48717447 lipocalin 9 [Homo sapiens]
          Length = 176

 Score = 43.1 bits (100), Expect = 1e-04
 Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 4/100 (4%)

Query: 1   MKPLLLAVSLGLIAALQ--AHHLLASDEEIQDVSGTWYLKAMTVD--REFPEMNLESVTP 56
           M  LLL++ L LIAA +   H ++  +  +  VSG WY   M  D      E     V  
Sbjct: 1   MALLLLSLGLSLIAAQEFDPHTVMQRNYNVARVSGVWYSIFMASDDLNRIKENGDLRVFV 60

Query: 57  MTLTTLEGGNLEAKVTMLISGRCQEVKAVLEKTDEPGKYT 96
             +  L+ G+L      ++ G C  V  V EKT++ G+Y+
Sbjct: 61  RNIEHLKNGSLIFDFEYMVQGECVAVVVVCEKTEKNGEYS 100


>gi|169177936 PREDICTED: similar to hCG1795014 [Homo sapiens]
          Length = 181

 Score = 41.6 bits (96), Expect = 4e-04
 Identities = 40/181 (22%), Positives = 76/181 (41%), Gaps = 9/181 (4%)

Query: 1   MKPLLLAVSLGLIAALQAHH--LLASDEEIQDVSGTWYLKAMTVD--REFPEMNLESVTP 56
           M  LLL + L L+ A +  +   + S+ ++  +SG WY   +  D   +  E     V  
Sbjct: 1   MMLLLLCLGLTLVCAQEEENNDAVTSNFDLSKISGEWYSVLLASDCREKIEEDGSMRVFV 60

Query: 57  MTLTTLEGGNLEAKVTMLISGRCQEVKAVLEKTDEPGKYTAD-GGKHVAYIIRSHVKDHY 115
             +  L   +L    T  ++G C E+    + T++    + D  G +V  I+ +   ++ 
Sbjct: 61  KHIDYLGNSSL----TFKLNGNCTEINLACKPTEKNAICSTDYNGLNVIDILETDYDNYI 116

Query: 116 IFYCEGELHGKPVRGVKLVGRDPKNNLEALEDFEKAAGARGLSTESILIPRQSETCSPGS 175
            FY +   +G+    ++L  R P  + +  E F K     G+  E+I    + + C    
Sbjct: 117 YFYNKNIKNGETFLMLELYVRTPDVSSQLKERFVKYCEEHGIDKENIFDLTKVDRCLQAR 176

Query: 176 D 176
           D
Sbjct: 177 D 177


>gi|169179152 PREDICTED: similar to hCG1795014 [Homo sapiens]
          Length = 181

 Score = 41.6 bits (96), Expect = 4e-04
 Identities = 40/181 (22%), Positives = 76/181 (41%), Gaps = 9/181 (4%)

Query: 1   MKPLLLAVSLGLIAALQAHH--LLASDEEIQDVSGTWYLKAMTVD--REFPEMNLESVTP 56
           M  LLL + L L+ A +  +   + S+ ++  +SG WY   +  D   +  E     V  
Sbjct: 1   MMLLLLCLGLTLVCAQEEENNDAVTSNFDLSKISGEWYSVLLASDCREKIEEDGSMRVFV 60

Query: 57  MTLTTLEGGNLEAKVTMLISGRCQEVKAVLEKTDEPGKYTAD-GGKHVAYIIRSHVKDHY 115
             +  L   +L    T  ++G C E+    + T++    + D  G +V  I+ +   ++ 
Sbjct: 61  KHIDYLGNSSL----TFKLNGNCTEINLACKPTEKNAICSTDYNGLNVIDILETDYDNYI 116

Query: 116 IFYCEGELHGKPVRGVKLVGRDPKNNLEALEDFEKAAGARGLSTESILIPRQSETCSPGS 175
            FY +   +G+    ++L  R P  + +  E F K     G+  E+I    + + C    
Sbjct: 117 YFYNKNIKNGETFLMLELYVRTPDVSSQLKERFVKYCEEHGIDKENIFDLTKVDRCLQAR 176

Query: 176 D 176
           D
Sbjct: 177 D 177


>gi|169181274 PREDICTED: similar to hCG1795014 [Homo sapiens]
          Length = 181

 Score = 41.6 bits (96), Expect = 4e-04
 Identities = 40/181 (22%), Positives = 76/181 (41%), Gaps = 9/181 (4%)

Query: 1   MKPLLLAVSLGLIAALQAHH--LLASDEEIQDVSGTWYLKAMTVD--REFPEMNLESVTP 56
           M  LLL + L L+ A +  +   + S+ ++  +SG WY   +  D   +  E     V  
Sbjct: 1   MMLLLLCLGLTLVCAQEEENNDAVTSNFDLSKISGEWYSVLLASDCREKIEEDGSMRVFV 60

Query: 57  MTLTTLEGGNLEAKVTMLISGRCQEVKAVLEKTDEPGKYTAD-GGKHVAYIIRSHVKDHY 115
             +  L   +L    T  ++G C E+    + T++    + D  G +V  I+ +   ++ 
Sbjct: 61  KHIDYLGNSSL----TFKLNGNCTEINLACKPTEKNAICSTDYNGLNVIDILETDYDNYI 116

Query: 116 IFYCEGELHGKPVRGVKLVGRDPKNNLEALEDFEKAAGARGLSTESILIPRQSETCSPGS 175
            FY +   +G+    ++L  R P  + +  E F K     G+  E+I    + + C    
Sbjct: 117 YFYNKNIKNGETFLMLELYVRTPDVSSQLKERFVKYCEEHGIDKENIFDLTKVDRCLQAR 176

Query: 176 D 176
           D
Sbjct: 177 D 177


>gi|65507519 glycodelin precursor [Homo sapiens]
          Length = 180

 Score = 36.2 bits (82), Expect = 0.015
 Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 5/121 (4%)

Query: 4   LLLAVSLGLIAALQAHHL--LASDEEIQDVSGTWYLKAMTVDREFPEMNLESVTPMTLTT 61
           LLL + + L+  + A  +     D E+  ++GTW+  AM  +       L++   + +T+
Sbjct: 4   LLLTLGVALVCGVPAMDIPQTKQDLELPKLAGTWHSMAMATNNISLMATLKAPLRVHITS 63

Query: 62  L---EGGNLEAKVTMLISGRCQEVKAVLEKTDEPGKYTADGGKHVAYIIRSHVKDHYIFY 118
           L      NLE  +    +  C E K + EKT+ P K+  +        +     D+++F 
Sbjct: 64  LLPTPEDNLEIVLHRWENNSCVEKKVLGEKTENPKKFKINYTVANEATLLDTDYDNFLFL 123

Query: 119 C 119
           C
Sbjct: 124 C 124


>gi|65507501 glycodelin precursor [Homo sapiens]
          Length = 180

 Score = 36.2 bits (82), Expect = 0.015
 Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 5/121 (4%)

Query: 4   LLLAVSLGLIAALQAHHL--LASDEEIQDVSGTWYLKAMTVDREFPEMNLESVTPMTLTT 61
           LLL + + L+  + A  +     D E+  ++GTW+  AM  +       L++   + +T+
Sbjct: 4   LLLTLGVALVCGVPAMDIPQTKQDLELPKLAGTWHSMAMATNNISLMATLKAPLRVHITS 63

Query: 62  L---EGGNLEAKVTMLISGRCQEVKAVLEKTDEPGKYTADGGKHVAYIIRSHVKDHYIFY 118
           L      NLE  +    +  C E K + EKT+ P K+  +        +     D+++F 
Sbjct: 64  LLPTPEDNLEIVLHRWENNSCVEKKVLGEKTENPKKFKINYTVANEATLLDTDYDNFLFL 123

Query: 119 C 119
           C
Sbjct: 124 C 124


>gi|62988357 lipocalin 8 [Homo sapiens]
          Length = 152

 Score = 33.1 bits (74), Expect = 0.13
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 29  QDVSGTWYLKAMTVDREFPEMNLESVTPMTLTTLEGGNLEAKVTMLISGRCQEVKAVLEK 88
           Q + G W    +  D+       + V  + LT L G NL  KV    SG C+  K V  +
Sbjct: 7   QKIGGFWREVGVASDQSLVLTAPKRVEGLFLT-LSGSNLTVKVAYNSSGSCEIEKIVGSE 65

Query: 89  TDEPGKYTADGGKHV 103
            D  GK+   G + +
Sbjct: 66  IDSTGKFAFPGHREI 80


>gi|39573716 lipocalin 6 [Homo sapiens]
          Length = 163

 Score = 33.1 bits (74), Expect = 0.13
 Identities = 34/163 (20%), Positives = 74/163 (45%), Gaps = 3/163 (1%)

Query: 1   MKPLLLAVSLGLIAALQAHHLLASDEEIQDVSGTWYLKAM-TVDREFP-EMNLESVTPMT 58
           M  LLLA  L L++  +A  +     + + + G WY+ A+ + ++ F  E ++++V  + 
Sbjct: 1   MGGLLLAAFLALVSVPRAQAVWLGRLDPEQLLGPWYVLAVASREKGFAMEKDMKNVVGVV 60

Query: 59  LTTLEGGNLEAKVTMLISGRC-QEVKAVLEKTDEPGKYTADGGKHVAYIIRSHVKDHYIF 117
           +T     NL    +    G C Q V  ++++           G    +++ ++ +D+ I 
Sbjct: 61  VTLTPENNLRTLSSQHGLGGCDQSVMDLIKRNSGWVFENPSIGVLELWVLATNFRDYAII 120

Query: 118 YCEGELHGKPVRGVKLVGRDPKNNLEALEDFEKAAGARGLSTE 160
           + + E   +P   V+L       + EA+  F K + + G  ++
Sbjct: 121 FTQLEFGDEPFNTVELYSLTETASQEAMGLFTKWSRSLGFLSQ 163


>gi|89886464 lipocalcin 12 [Homo sapiens]
          Length = 192

 Score = 29.6 bits (65), Expect = 1.4
 Identities = 30/140 (21%), Positives = 50/140 (35%), Gaps = 7/140 (5%)

Query: 33  GTWYLKAMTVDREFPEMN-LESVTPMTLTTLEGGNLEAKVTMLISGRCQEVKAVLEKTDE 91
           G W++  +  +   PE   L +    T    + G  E    M     C     VL    +
Sbjct: 41  GEWFVLGLAGNSFRPEHRALLNAFTATFELSDDGRFEVWNAMTRGQHCDTWSYVLIPAAQ 100

Query: 92  PGKYTADGG------KHVAYIIRSHVKDHYIFYCEGELHGKPVRGVKLVGRDPKNNLEAL 145
           PG++T D G      +    ++ S      +           V  + L+GR        L
Sbjct: 101 PGQFTVDHGVEPGADREETRVVDSDYTQFALMLSRRHTSRLAVLRISLLGRSWLLPPGTL 160

Query: 146 EDFEKAAGARGLSTESILIP 165
           + F     A+GLS ++I+ P
Sbjct: 161 DQFICLGRAQGLSDDNIVFP 180


>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
          Length = 355

 Score = 28.9 bits (63), Expect = 2.4
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 21 LLASDEEIQDVSGTWYLKAMTVDREFPEMNLESVTPMTLTTLEGGNLEAKVTMLISGRCQ 80
          L     E+QD+     + A+  +R   E NLE   P+ ++     +   ++  L+  RCQ
Sbjct: 25 LALESPEVQDLQLEREM-ALATNRSLAERNLEFQGPLEISRSNLSDRYQELRKLVE-RCQ 82

Query: 81 EVKAVLEK 88
          E KA LEK
Sbjct: 83 EQKAKLEK 90


>gi|4504067 aspartate aminotransferase 1 [Homo sapiens]
          Length = 413

 Score = 28.1 bits (61), Expect = 4.1
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 6/53 (11%)

Query: 104 AYIIRSHVKDHYIFYCEGE------LHGKPVRGVKLVGRDPKNNLEALEDFEK 150
           A+ IR  V + + F+C         L+ + V  + +VG++P++ L+ L   EK
Sbjct: 238 AWAIRYFVSEGFEFFCAQSFSKNFGLYNERVGNLTVVGKEPESILQVLSQMEK 290


>gi|89111953 transmembrane protein 132B [Homo sapiens]
          Length = 1078

 Score = 28.1 bits (61), Expect = 4.1
 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 9/76 (11%)

Query: 48  EMNLESVTPMTLTTLEGGNLEAKVTMLISGRCQEV---------KAVLEKTDEPGKYTAD 98
           + NLES  P+ +   EG     K+ M+IS  CQ+          K  ++   EP      
Sbjct: 738 QANLESKWPIVVAEGEGQGPLIKLEMMISEPCQKTKRKSVLAVGKGNVKVKFEPSSDEHQ 797

Query: 99  GGKHVAYIIRSHVKDH 114
           GG +    I    KDH
Sbjct: 798 GGSNDIEGINREYKDH 813


>gi|126116598 lipocalin 10 [Homo sapiens]
          Length = 200

 Score = 27.7 bits (60), Expect = 5.4
 Identities = 39/196 (19%), Positives = 78/196 (39%), Gaps = 32/196 (16%)

Query: 1   MKPLLLAVSLGLIAALQAHHLLASDEEIQD-------------VSGTWYLKAMTVDRE-- 45
           M+  LL ++L L+  L    +LA+  ++Q+              SG WY+ A   D +  
Sbjct: 1   MRQGLLVLALVLVLVL----VLAAGSQVQEWYPRESHALNWNKFSGFWYILATATDAQGF 56

Query: 46  FPEMNLESVTPMTLTTLEGGNLEAKVTMLISGRCQEVKAVLEKTDEPG------KYTA-- 97
            P  +   +    +   + G L   +       CQ  + +L K  +         Y A  
Sbjct: 57  LPARDKRKLGASVVKVNKVGQLRVLLAFRRLKGCQSQEVILRKDGKKPVFGNACAYAAGP 116

Query: 98  ----DGGKHV-AYIIRSHVKDHYIFYCEGELHGKPVRGVKLVGRDPKNNLEALEDFEKAA 152
               +G K V A+ + S    + + Y       +  + + L  R   ++ ++L++F  A 
Sbjct: 117 REGQEGVKGVKAFHVLSTDYSYGLVYLRLGRATQNYKNLLLFHRQNVSSFQSLKEFMDAC 176

Query: 153 GARGLSTESILIPRQS 168
              GLS  ++++P+ +
Sbjct: 177 DILGLSKAAVILPKDA 192


>gi|166706911 interferon-induced, hepatitis C-associated
           microtubular aggregate protein [Homo sapiens]
          Length = 444

 Score = 27.7 bits (60), Expect = 5.4
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 12/107 (11%)

Query: 43  DREFPEMNLESVTPMTLTTLEGGNLEAKVTMLISGRCQEVKAVLEKTDEPGKYTADGGKH 102
           D +  E  L   TP TL   +     +     I GR ++V   L+  +  G         
Sbjct: 84  DTKISEWKLGLCTPETLFCCDVTKYNSPTNFQIDGRNRKVIMDLKTMENLG--------- 134

Query: 103 VAYIIRSHVKDHYIFYCEGELHGKPVRGVKLVGRDPKNNLEALEDFE 149
           +A      ++D+ +F CE  L  + ++GV  +    K+ L AL  +E
Sbjct: 135 LAQNCTISIQDYEVFRCEDSLDERKIKGVIEL---RKSLLSALRTYE 178


>gi|62241024 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 2
           [Homo sapiens]
          Length = 448

 Score = 27.3 bits (59), Expect = 7.0
 Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 13/94 (13%)

Query: 68  EAKVTMLISGRCQEVKAVLEKTDEPGKYTADGGKHVAYIIRSHVKDHYIFYCEGELHGKP 127
           E K+    +G   +  A  EKTDE  K        +  +IRS++ D+             
Sbjct: 27  EEKIKPDTNGAVVKTNANAEKTDEEEKEDRAAQSLLNKLIRSNLVDN------------- 73

Query: 128 VRGVKLVGRDPKNNLEALEDFEKAAGARGLSTES 161
              V+++ RDP + L +++ FE+    + L  +S
Sbjct: 74  TNQVEVLQRDPNSPLYSVKSFEELRLPQNLIAQS 107


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.133    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,546,864
Number of Sequences: 37866
Number of extensions: 260842
Number of successful extensions: 448
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 431
Number of HSP's gapped (non-prelim): 20
length of query: 176
length of database: 18,247,518
effective HSP length: 95
effective length of query: 81
effective length of database: 14,650,248
effective search space: 1186670088
effective search space used: 1186670088
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.