PSMD5 31034

Name: PSMD5	Sequence: fasta or formatted (504aa)		NCBI GI: 4826952
Description: proteasome 26S non-ATPase subunit 5		Referenced in: Proteasome
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 39 2 C cysteine 1.4 7 1 D aspartate 4.2 21 2 E glutamate 8.1 41 2 F phenylalanine 3.4 17 2 G glycine 4.8 24 2 H histidine 1.8 9 2 I isoleucine 6.2 31 2 K lysine 4.2 21 1 L leucine 13.5 68 2 M methionine 2.0 10 1 N asparagine 4.0 20 2 P proline 4.4 22 2 Q glutamine 4.8 24 2 R arginine 5.6 28 1 S serine 7.9 40 2 T threonine 4.8 24 2 V valine 8.1 41 2 W tryptophan 0.4 2 1 Y tyrosine 3.0 15 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome 26S non-ATPase subunit 5 KPNA2 0.013 karyopherin alpha 2 ARMC9 0.007 armadillo repeat containing 9 CDH16 0.006 cadherin 16 precursor FASTKD2 0.006 FAST kinase domains 2 FASTKD2 0.006 FAST kinase domains 2 FASTKD2 0.006 FAST kinase domains 2 ZER1 0.006 zyg-11 homolog B (C. elegans)-like FHOD3 0.005 formin homology 2 domain containing 3 SPAG6 0.005 sperm associated antigen 6 isoform 1 SPAG6 0.005 sperm associated antigen 6 isoform 2 CCDC93 0.005 coiled-coil domain containing 93 SR140 0.004 U2-associated SR140 protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.