Guide to the Human Genome
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Search of human proteins with 4504341

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4504341 histone acetyltransferase 1 [Homo sapiens]
         (419 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4504341 histone acetyltransferase 1 [Homo sapiens]                 852   0.0  
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]     35   0.17 
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]         34   0.22 
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]         34   0.22 
gi|114155142 nuclear pore complex-associated protein TPR [Homo s...    34   0.22 
gi|156104908 myosin heavy chain 6 [Homo sapiens]                       34   0.28 
gi|16262452 cingulin [Homo sapiens]                                    32   0.82 
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ...    32   0.82 
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ...    32   0.82 
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho...    32   1.1  
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho...    32   1.1  
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho...    32   1.1  
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho...    32   1.1  
gi|65507403 SEC15-like 1 isoform a [Homo sapiens]                      32   1.1  
gi|62243652 SEC15-like 1 isoform b [Homo sapiens]                      32   1.1  
gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo sa...    32   1.4  
gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo sa...    32   1.4  
gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo sa...    32   1.4  
gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo sa...    32   1.4  
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo...    32   1.4  
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo...    32   1.4  
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo...    32   1.4  
gi|191252785 centrobin, centrosomal BRCA2 interacting protein is...    32   1.4  
gi|80861396 centrobin, centrosomal BRCA2 interacting protein iso...    32   1.4  
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [...    32   1.4  
gi|154354990 ankyrin repeat domain 26 [Homo sapiens]                   32   1.4  
gi|31982906 cingulin-like 1 [Homo sapiens]                             31   1.8  
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s...    31   2.4  
gi|219521893 coiled-coil transcriptional coactivator isoform 2 [...    31   2.4  
gi|14149742 coiled-coil transcriptional coactivator isoform 1 [H...    31   2.4  

>gi|4504341 histone acetyltransferase 1 [Homo sapiens]
          Length = 419

 Score =  852 bits (2200), Expect = 0.0
 Identities = 419/419 (100%), Positives = 419/419 (100%)

Query: 1   MAGFGAMEKFLVEYKSAVEKKLAEYKCNTNTAIELKLVRFPEDLENDIRTFFPEYTHQLF 60
           MAGFGAMEKFLVEYKSAVEKKLAEYKCNTNTAIELKLVRFPEDLENDIRTFFPEYTHQLF
Sbjct: 1   MAGFGAMEKFLVEYKSAVEKKLAEYKCNTNTAIELKLVRFPEDLENDIRTFFPEYTHQLF 60

Query: 61  GDDETAFGYKGLKILLYYIAGSLSTMFRVEYASKVDENFDCVEADDVEGKIRQIIPPGFC 120
           GDDETAFGYKGLKILLYYIAGSLSTMFRVEYASKVDENFDCVEADDVEGKIRQIIPPGFC
Sbjct: 61  GDDETAFGYKGLKILLYYIAGSLSTMFRVEYASKVDENFDCVEADDVEGKIRQIIPPGFC 120

Query: 121 TNTNDFLSLLEKEVDFKPFGTLLHTYSVLSPTGGENFTFQIYKADMTCRGFREYHERLQT 180
           TNTNDFLSLLEKEVDFKPFGTLLHTYSVLSPTGGENFTFQIYKADMTCRGFREYHERLQT
Sbjct: 121 TNTNDFLSLLEKEVDFKPFGTLLHTYSVLSPTGGENFTFQIYKADMTCRGFREYHERLQT 180

Query: 181 FLMWFIETASFIDVDDERWHYFLVFEKYNKDGATLFATVGYMTVYNYYVYPDKTRPRVSQ 240
           FLMWFIETASFIDVDDERWHYFLVFEKYNKDGATLFATVGYMTVYNYYVYPDKTRPRVSQ
Sbjct: 181 FLMWFIETASFIDVDDERWHYFLVFEKYNKDGATLFATVGYMTVYNYYVYPDKTRPRVSQ 240

Query: 241 MLILTPFQGQGHGAQLLETVHRYYTEFPTVLDITAEDPSKSYVKLRDFVLVKLCQDLPCF 300
           MLILTPFQGQGHGAQLLETVHRYYTEFPTVLDITAEDPSKSYVKLRDFVLVKLCQDLPCF
Sbjct: 241 MLILTPFQGQGHGAQLLETVHRYYTEFPTVLDITAEDPSKSYVKLRDFVLVKLCQDLPCF 300

Query: 301 SREKLMQGFNEDMAIEAQQKFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLI 360
           SREKLMQGFNEDMAIEAQQKFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLI
Sbjct: 301 SREKLMQGFNEDMAIEAQQKFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLI 360

Query: 361 SPYKKKQRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESFQELVEDYRRVIERLAQE 419
           SPYKKKQRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESFQELVEDYRRVIERLAQE
Sbjct: 361 SPYKKKQRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESFQELVEDYRRVIERLAQE 419


>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
          Length = 1960

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 8/110 (7%)

Query: 303  EKLMQGFNEDMAIEAQQKFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLISP 362
            E  +    ED+  E   + K  KQ  R + E L  L T++ D     + + +++      
Sbjct: 1110 ESQISELQEDLESERASRNKAEKQK-RDLGEELEALKTELEDTLDSTAAQQELR------ 1162

Query: 363  YKKKQRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESFQELVEDYRRV 412
              K+++++  ++K L  E  T++    E+  +H Q  E   E +E  +RV
Sbjct: 1163 -SKREQEVNILKKTLEEEAKTHEAQIQEMRQKHSQAVEELAEQLEQTKRV 1211


>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
          Length = 3907

 Score = 34.3 bits (77), Expect = 0.22
 Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 17/158 (10%)

Query: 270 VLDITAEDPSKSYVKLRDFVLVKLCQDLPCFSREKLMQGFNEDMAIEAQ---QKFKINKQ 326
           VLD  AE       +LR  +L         FS E+ +    ED+ IE +   +K K N  
Sbjct: 610 VLDRMAESQEAELERLRTQLL---------FSHEEELSKLKEDLEIEHRINIEKLKDNLG 660

Query: 327 -HARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLISPYKKKQRDLAKMRKCLRPEELTNQ 385
            H ++  + L+  ++   +  Q+    L  K+  +     K +DL +     + EE+T Q
Sbjct: 661 IHYKQQIDGLQNEMSQKIETMQFEKDNLITKQNQLILEISKLKDLQQSLVNSKSEEMTLQ 720

Query: 386 MN----QIEISMQHEQLEESFQELVEDYRRVIERLAQE 419
           +N    +IEI  Q E+ + + ++ V++ +   E L ++
Sbjct: 721 INELQKEIEILRQEEKEKGTLEQEVQELQLKTELLEKQ 758


>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
          Length = 3899

 Score = 34.3 bits (77), Expect = 0.22
 Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 17/158 (10%)

Query: 270 VLDITAEDPSKSYVKLRDFVLVKLCQDLPCFSREKLMQGFNEDMAIEAQ---QKFKINKQ 326
           VLD  AE       +LR  +L         FS E+ +    ED+ IE +   +K K N  
Sbjct: 610 VLDRMAESQEAELERLRTQLL---------FSHEEELSKLKEDLEIEHRINIEKLKDNLG 660

Query: 327 -HARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLISPYKKKQRDLAKMRKCLRPEELTNQ 385
            H ++  + L+  ++   +  Q+    L  K+  +     K +DL +     + EE+T Q
Sbjct: 661 IHYKQQIDGLQNEMSQKIETMQFEKDNLITKQNQLILEISKLKDLQQSLVNSKSEEMTLQ 720

Query: 386 MN----QIEISMQHEQLEESFQELVEDYRRVIERLAQE 419
           +N    +IEI  Q E+ + + ++ V++ +   E L ++
Sbjct: 721 INELQKEIEILRQEEKEKGTLEQEVQELQLKTELLEKQ 758


>gi|114155142 nuclear pore complex-associated protein TPR [Homo
            sapiens]
          Length = 2363

 Score = 34.3 bits (77), Expect = 0.22
 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 4/95 (4%)

Query: 325  KQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLISPYKKKQRDLAKMRKCLRPEELTN 384
            +Q   +V ++   L T  S+ EQY++    ++  L     K+++   ++RK +      +
Sbjct: 942  RQTEEQVNDLKERLKTSTSNVEQYQAMVTSLEESL----NKEKQVTEEVRKNIEVRLKES 997

Query: 385  QMNQIEISMQHEQLEESFQELVEDYRRVIERLAQE 419
               Q ++  +  ++E+  QEL +D RR IE + Q+
Sbjct: 998  AEFQTQLEKKLMEVEKEKQELQDDKRRAIESMEQQ 1032



 Score = 30.0 bits (66), Expect = 4.1
 Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 11/120 (9%)

Query: 306 MQGFNEDMAIEAQQK-FKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLIS-PY 363
           ++G +E   +E++Q+ F+I K    R+      LV +  + +  R     +  +L +   
Sbjct: 39  LKGRHEKFKVESEQQYFEIEK----RLSHSQERLVNETRECQSLRLELEKLNNQLKALTE 94

Query: 364 KKKQRDLAKMRKCLRPEELTNQMNQIEISMQ-----HEQLEESFQELVEDYRRVIERLAQ 418
           K K+ ++A+ R      + T    ++E   +     +E+L +  + L ED +R+ E+L +
Sbjct: 95  KNKELEIAQDRNIAIQSQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDVKRLNEKLKE 154


>gi|156104908 myosin heavy chain 6 [Homo sapiens]
          Length = 1939

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 20/124 (16%)

Query: 313  MAIEAQQKFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRL------------- 359
            +A++ Q+K K N+     + E L    T  +  E+ RS   D+ R L             
Sbjct: 1102 LALQLQKKLKENQARIEELEEELEAERTARAKVEKLRS---DLSRELEEISERLEEAGGA 1158

Query: 360  ----ISPYKKKQRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESFQELVEDYRRVIER 415
                I   KK++ +  KMR+ L    L ++     +  +H        E +++ +RV ++
Sbjct: 1159 TSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRKKHADSVAELGEQIDNLQRVKQK 1218

Query: 416  LAQE 419
            L +E
Sbjct: 1219 LEKE 1222


>gi|16262452 cingulin [Homo sapiens]
          Length = 1203

 Score = 32.3 bits (72), Expect = 0.82
 Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 11/112 (9%)

Query: 303 EKLMQGFNEDMAIEAQQKFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLISP 362
           E L  G  E   +E Q K K    H +       +L+ D+ +  +     L+ K+R+   
Sbjct: 435 EDLRHGL-ETQVMELQNKLK----HVQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEEQ 489

Query: 363 YKKKQRDLAKMRKCLRPEELTNQMNQIEISMQH-----EQLEESFQELVEDY 409
            + ++R+L  ++  L+ EE+ ++  ++E   Q      EQL  S Q+  +D+
Sbjct: 490 LRLRERELTALKGALK-EEVASRDQEVEHVRQQYQRDTEQLRRSMQDATQDH 540


>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
            sapiens]
          Length = 1983

 Score = 32.3 bits (72), Expect = 0.82
 Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 22/135 (16%)

Query: 272  DITAEDPSKSYVKLRDFVLVKLCQDLPCFSREKLMQGFNEDMAIEAQQKFKINKQHARRV 331
            D+ AE+   S +      L +  +DL C              ++E ++K +++ + A+R 
Sbjct: 1058 DLQAEEDRVSALTKAKLRLEQQVEDLEC--------------SLEQEKKLRMDTERAKRK 1103

Query: 332  YE-ILRLLVTDMSDAEQYRSYRLDIKRRLISPYKKKQRDLAKMRKCLRPEELTNQMNQIE 390
             E  L+L    ++DA Q        K++L    KKK  +L+++   +  E+L     Q +
Sbjct: 1104 LEGDLKLTQESVADAAQD-------KQQLEEKLKKKDSELSQLSLRVEDEQLLGAQMQKK 1156

Query: 391  ISMQHEQLEESFQEL 405
            I     + EE  +EL
Sbjct: 1157 IKELQARAEELEEEL 1171


>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
            sapiens]
          Length = 1939

 Score = 32.3 bits (72), Expect = 0.82
 Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 23/134 (17%)

Query: 306  MQGFNED---MAIEAQQKFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRL--- 359
            +QG  ED   +AI+ Q+K K  +     + E +       + AE+ RS   D+ R L   
Sbjct: 1094 LQGKIEDEQALAIQLQKKIKELQARIEELEEEIEAERASRAKAEKQRS---DLSRELEEI 1150

Query: 360  --------------ISPYKKKQRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESFQEL 405
                          I   KK++ +  KMR+ L    L ++     +  +H        E 
Sbjct: 1151 SERLEEAGGATSAQIEMNKKREAEFQKMRRDLEESTLQHEATAAALRKKHADSVAELGEQ 1210

Query: 406  VEDYRRVIERLAQE 419
            ++  +RV ++L +E
Sbjct: 1211 IDSLQRVKQKLEKE 1224


>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
            sapiens]
          Length = 1972

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 13/170 (7%)

Query: 249  GQGHGAQLLETVHRYYTEFPTVLDITAEDPSKSYVKLRDFVLVKLCQDLPCFSREKLMQG 308
            G+   A+L + VH+   E  +V  +  E   K+         +KL +D+   S +  +Q 
Sbjct: 1271 GERARAELNDKVHKLQNEVESVTGMLNEAEGKA---------IKLAKDVASLSSQ--LQD 1319

Query: 309  FNEDMAIEAQQKFKINKQHARRVYE--ILRLLVTDMSDAEQYRSYRLDIKRRLISPYKKK 366
              E +  E +QK  ++ +  +   E   L+  + +  +A+Q     +      +S  KKK
Sbjct: 1320 TQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHISTLNIQLSDSKKK 1379

Query: 367  QRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESFQELVEDYRRVIERL 416
             +D A   + L   +   Q     ++ Q+E+   ++ +L +   R+ + L
Sbjct: 1380 LQDFASTVEALEEGKKRFQKEIENLTQQYEEKAAAYDKLEKTKNRLQQEL 1429


>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
            sapiens]
          Length = 1979

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 13/170 (7%)

Query: 249  GQGHGAQLLETVHRYYTEFPTVLDITAEDPSKSYVKLRDFVLVKLCQDLPCFSREKLMQG 308
            G+   A+L + VH+   E  +V  +  E   K+         +KL +D+   S +  +Q 
Sbjct: 1278 GERARAELNDKVHKLQNEVESVTGMLNEAEGKA---------IKLAKDVASLSSQ--LQD 1326

Query: 309  FNEDMAIEAQQKFKINKQHARRVYE--ILRLLVTDMSDAEQYRSYRLDIKRRLISPYKKK 366
              E +  E +QK  ++ +  +   E   L+  + +  +A+Q     +      +S  KKK
Sbjct: 1327 TQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHISTLNIQLSDSKKK 1386

Query: 367  QRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESFQELVEDYRRVIERL 416
             +D A   + L   +   Q     ++ Q+E+   ++ +L +   R+ + L
Sbjct: 1387 LQDFASTVEALEEGKKRFQKEIENLTQQYEEKAAAYDKLEKTKNRLQQEL 1436


>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
            sapiens]
          Length = 1945

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 13/170 (7%)

Query: 249  GQGHGAQLLETVHRYYTEFPTVLDITAEDPSKSYVKLRDFVLVKLCQDLPCFSREKLMQG 308
            G+   A+L + VH+   E  +V  +  E   K+         +KL +D+   S +  +Q 
Sbjct: 1278 GERARAELNDKVHKLQNEVESVTGMLNEAEGKA---------IKLAKDVASLSSQ--LQD 1326

Query: 309  FNEDMAIEAQQKFKINKQHARRVYE--ILRLLVTDMSDAEQYRSYRLDIKRRLISPYKKK 366
              E +  E +QK  ++ +  +   E   L+  + +  +A+Q     +      +S  KKK
Sbjct: 1327 TQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHISTLNIQLSDSKKK 1386

Query: 367  QRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESFQELVEDYRRVIERL 416
             +D A   + L   +   Q     ++ Q+E+   ++ +L +   R+ + L
Sbjct: 1387 LQDFASTVEALEEGKKRFQKEIENLTQQYEEKAAAYDKLEKTKNRLQQEL 1436


>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
            sapiens]
          Length = 1938

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 13/170 (7%)

Query: 249  GQGHGAQLLETVHRYYTEFPTVLDITAEDPSKSYVKLRDFVLVKLCQDLPCFSREKLMQG 308
            G+   A+L + VH+   E  +V  +  E   K+         +KL +D+   S +  +Q 
Sbjct: 1271 GERARAELNDKVHKLQNEVESVTGMLNEAEGKA---------IKLAKDVASLSSQ--LQD 1319

Query: 309  FNEDMAIEAQQKFKINKQHARRVYE--ILRLLVTDMSDAEQYRSYRLDIKRRLISPYKKK 366
              E +  E +QK  ++ +  +   E   L+  + +  +A+Q     +      +S  KKK
Sbjct: 1320 TQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHISTLNIQLSDSKKK 1379

Query: 367  QRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESFQELVEDYRRVIERL 416
             +D A   + L   +   Q     ++ Q+E+   ++ +L +   R+ + L
Sbjct: 1380 LQDFASTVEALEEGKKRFQKEIENLTQQYEEKAAAYDKLEKTKNRLQQEL 1429


>gi|65507403 SEC15-like 1 isoform a [Homo sapiens]
          Length = 804

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 11/74 (14%)

Query: 134 VDFKPFGTLLHTYSVLSPTGGENFTFQIY-------KADMTCRGFREYHERLQTFLMWFI 186
           VDF P    LH YSVL    G+  TF+ Y       +A +  +     HE +  +  +F 
Sbjct: 281 VDFSPVYRCLHIYSVL----GDEETFENYYRKQRKKQARLVLQPQSNMHETVDGYRRYFT 336

Query: 187 ETASFIDVDDERWH 200
           +   F  V+D   H
Sbjct: 337 QIVGFFVVEDHILH 350


>gi|62243652 SEC15-like 1 isoform b [Homo sapiens]
          Length = 799

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 11/74 (14%)

Query: 134 VDFKPFGTLLHTYSVLSPTGGENFTFQIY-------KADMTCRGFREYHERLQTFLMWFI 186
           VDF P    LH YSVL    G+  TF+ Y       +A +  +     HE +  +  +F 
Sbjct: 276 VDFSPVYRCLHIYSVL----GDEETFENYYRKQRKKQARLVLQPQSNMHETVDGYRRYFT 331

Query: 187 ETASFIDVDDERWH 200
           +   F  V+D   H
Sbjct: 332 QIVGFFVVEDHILH 345


>gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo
           sapiens]
          Length = 1268

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 16/138 (11%)

Query: 278 PSKSYVKLRDFVLVKLC--QDLPCFSREKLMQGFNED------MAIEAQQKFKINKQHAR 329
           P +S ++ RDF+ ++L   +      R++L Q   E+      +  E Q++ +  K+  R
Sbjct: 345 PGESTLR-RDFLRLQLANKERSEALRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQRR 403

Query: 330 RVYEILRLL--VTDMSDAEQYRSY-----RLDIKRRLISPYKKKQRDLAKMRKCLRPEEL 382
           R+ E  R    +    + EQ R Y     R + +RR     + K++ L + R+  R +  
Sbjct: 404 RLEEQQRREKELRKQQEREQRRHYEEQMRREEERRRAEHEQEYKRKQLEEQRQAERLQRQ 463

Query: 383 TNQMNQIEISMQHEQLEE 400
             Q     +S+QH++ E+
Sbjct: 464 LKQERDYLVSLQHQRQEQ 481


>gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo
           sapiens]
          Length = 1276

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 16/138 (11%)

Query: 278 PSKSYVKLRDFVLVKLC--QDLPCFSREKLMQGFNED------MAIEAQQKFKINKQHAR 329
           P +S ++ RDF+ ++L   +      R++L Q   E+      +  E Q++ +  K+  R
Sbjct: 345 PGESTLR-RDFLRLQLANKERSEALRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQRR 403

Query: 330 RVYEILRLL--VTDMSDAEQYRSY-----RLDIKRRLISPYKKKQRDLAKMRKCLRPEEL 382
           R+ E  R    +    + EQ R Y     R + +RR     + K++ L + R+  R +  
Sbjct: 404 RLEEQQRREKELRKQQEREQRRHYEEQMRREEERRRAEHEQEYKRKQLEEQRQAERLQRQ 463

Query: 383 TNQMNQIEISMQHEQLEE 400
             Q     +S+QH++ E+
Sbjct: 464 LKQERDYLVSLQHQRQEQ 481


>gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo
           sapiens]
          Length = 1323

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 16/138 (11%)

Query: 278 PSKSYVKLRDFVLVKLC--QDLPCFSREKLMQGFNED------MAIEAQQKFKINKQHAR 329
           P +S ++ RDF+ ++L   +      R++L Q   E+      +  E Q++ +  K+  R
Sbjct: 345 PGESTLR-RDFLRLQLANKERSEALRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQRR 403

Query: 330 RVYEILRLL--VTDMSDAEQYRSY-----RLDIKRRLISPYKKKQRDLAKMRKCLRPEEL 382
           R+ E  R    +    + EQ R Y     R + +RR     + K++ L + R+  R +  
Sbjct: 404 RLEEQQRREKELRKQQEREQRRHYEEQMRREEERRRAEHEQEYKRKQLEEQRQAERLQRQ 463

Query: 383 TNQMNQIEISMQHEQLEE 400
             Q     +S+QH++ E+
Sbjct: 464 LKQERDYLVSLQHQRQEQ 481


>gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo
           sapiens]
          Length = 1331

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 16/138 (11%)

Query: 278 PSKSYVKLRDFVLVKLC--QDLPCFSREKLMQGFNED------MAIEAQQKFKINKQHAR 329
           P +S ++ RDF+ ++L   +      R++L Q   E+      +  E Q++ +  K+  R
Sbjct: 345 PGESTLR-RDFLRLQLANKERSEALRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQRR 403

Query: 330 RVYEILRLL--VTDMSDAEQYRSY-----RLDIKRRLISPYKKKQRDLAKMRKCLRPEEL 382
           R+ E  R    +    + EQ R Y     R + +RR     + K++ L + R+  R +  
Sbjct: 404 RLEEQQRREKELRKQQEREQRRHYEEQMRREEERRRAEHEQEYKRKQLEEQRQAERLQRQ 463

Query: 383 TNQMNQIEISMQHEQLEE 400
             Q     +S+QH++ E+
Sbjct: 464 LKQERDYLVSLQHQRQEQ 481


>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
            sapiens]
          Length = 1939

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 18/137 (13%)

Query: 300  FSREKLMQGFNEDMAIEAQQKFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRL 359
            F    L     ++ A+  Q + KI +  AR + E+   +  + +   +    R D+ R L
Sbjct: 1089 FEMSGLQSKIEDEQALGMQLQKKIKELQAR-IEELEEEIEAERASRAKAEKQRSDLSREL 1147

Query: 360  -----------------ISPYKKKQRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESF 402
                             I   KK++ +  KMR+ L    L ++     +  +H       
Sbjct: 1148 EEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLEEATLQHEATAATLRKKHADSVAEL 1207

Query: 403  QELVEDYRRVIERLAQE 419
             E +++ +RV ++L +E
Sbjct: 1208 GEQIDNLQRVKQKLEKE 1224


>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
            sapiens]
          Length = 1941

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 18/137 (13%)

Query: 300  FSREKLMQGFNEDMAIEAQQKFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRL 359
            F    L     ++ A+  Q + KI +  AR + E+   +  + +   +    R D+ R L
Sbjct: 1091 FEISNLQSKIEDEQALGIQLQKKIKELQAR-IEELEEEIEAERASRAKAEKQRSDLSREL 1149

Query: 360  -----------------ISPYKKKQRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESF 402
                             I   KK++ +  KMR+ L    L ++     +  +H       
Sbjct: 1150 EEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLEEATLQHEATAATLRKKHADSVAEL 1209

Query: 403  QELVEDYRRVIERLAQE 419
             E +++ +RV ++L +E
Sbjct: 1210 GEQIDNLQRVKQKLEKE 1226


>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
            sapiens]
          Length = 1941

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 18/137 (13%)

Query: 300  FSREKLMQGFNEDMAIEAQQKFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRL 359
            F    L     ++ A+  Q + KI +  AR + E+   +  + +   +    R D+ R L
Sbjct: 1091 FEISNLQSKIEDEQALGIQLQKKIKELQAR-IEELEEEIEAERASRAKAEKQRSDLSREL 1149

Query: 360  -----------------ISPYKKKQRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESF 402
                             I   KK++ +  KMR+ L    L ++     +  +H       
Sbjct: 1150 EEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLEEATLQHEATAATLRKKHADSVAEL 1209

Query: 403  QELVEDYRRVIERLAQE 419
             E +++ +RV ++L +E
Sbjct: 1210 GEQIDNLQRVKQKLEKE 1226


>gi|191252785 centrobin, centrosomal BRCA2 interacting protein
           isoform alpha [Homo sapiens]
          Length = 903

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 9/114 (7%)

Query: 304 KLMQGFNEDM-AIEAQQKFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLISP 362
           +L Q  +E M A+  +Q+    +Q  R   E  R  +T   +AEQ R   L  +R     
Sbjct: 280 RLEQSLSEAMEALNREQESARLQQRERETLEEERQALTLRLEAEQQRCCVLQEERDAARA 339

Query: 363 YK-KKQRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESFQELVEDYRRVIER 415
            +  + R+L  +R  L  E  T        + Q  QL+E +Q L E+ +  +ER
Sbjct: 340 GQLSEHRELETLRAALEEERQT-------WAQQEHQLKEHYQALQEESQAQLER 386


>gi|80861396 centrobin, centrosomal BRCA2 interacting protein
           isoform beta [Homo sapiens]
          Length = 925

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 9/114 (7%)

Query: 304 KLMQGFNEDM-AIEAQQKFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLISP 362
           +L Q  +E M A+  +Q+    +Q  R   E  R  +T   +AEQ R   L  +R     
Sbjct: 280 RLEQSLSEAMEALNREQESARLQQRERETLEEERQALTLRLEAEQQRCCVLQEERDAARA 339

Query: 363 YK-KKQRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESFQELVEDYRRVIER 415
            +  + R+L  +R  L  E  T        + Q  QL+E +Q L E+ +  +ER
Sbjct: 340 GQLSEHRELETLRAALEEERQT-------WAQQEHQLKEHYQALQEESQAQLER 386


>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
            sapiens]
          Length = 1937

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 26/137 (18%), Positives = 56/137 (40%), Gaps = 18/137 (13%)

Query: 300  FSREKLMQGFNEDMAIEAQQKFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRL 359
            F    L+    ++ A+E Q + KI +  AR + E+   +  + +   +    R D+ R L
Sbjct: 1088 FEISNLISKIEDEQAVEIQLQKKIKELQAR-IEELGEEIEAERASRAKAEKQRSDLSREL 1146

Query: 360  -----------------ISPYKKKQRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESF 402
                             +   KK++ +  K+R+ L    L ++     +  +H       
Sbjct: 1147 EEISERLEEAGGATSAQVELNKKREAEFQKLRRDLEEATLQHEAMVAALRKKHADSMAEL 1206

Query: 403  QELVEDYRRVIERLAQE 419
             E +++ +RV ++L +E
Sbjct: 1207 GEQIDNLQRVKQKLEKE 1223


>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
          Length = 1710

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 26/143 (18%), Positives = 63/143 (44%), Gaps = 6/143 (4%)

Query: 272 DITAEDPSKSYVKLRDFVLVKLCQDLPCFSREKLMQGFNEDMAIEAQQKFKINKQHARRV 331
           +  +ED    +   ++F+L+     + C     L++   +D A+  ++  ++ K H   +
Sbjct: 692 ETASEDCELPHSSYKNFMLLIEQLGMECKDSVSLLK--IQDAALSCERLLELKKNHCELL 749

Query: 332 YEILRLLVTDMSDAEQYRSYRLDIKRRLISPYKKKQRDLAKMRKCLRPEELTNQMNQIEI 391
              ++ +   ++  ++  S   +IK +L     + +R+L  +R  L  EE   +      
Sbjct: 750 TVKIKKMEDKVNVLQRELSETKEIKSQLEHQKVEWERELCSLRFSLNQEEEKRR----NA 805

Query: 392 SMQHEQLEESFQELVEDYRRVIE 414
              +E++ E  +   E YR+ +E
Sbjct: 806 DTLYEKIREQLRRKEEQYRKEVE 828


>gi|31982906 cingulin-like 1 [Homo sapiens]
          Length = 1302

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 24/111 (21%), Positives = 58/111 (52%), Gaps = 12/111 (10%)

Query: 310  NEDMAIEAQQKFKINKQ---------HARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLI 360
            +E +  E++QK ++ +          H  +  E L+  + D+ +A   R+  L+++ +L 
Sbjct: 919  SEKLKEESEQKEQLRRLKNEMENERWHLGKTIEKLQKEMADIVEAS--RTSTLELQNQLD 976

Query: 361  SPYKKKQRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESFQELVEDYRR 411
               +K +R+LA+M++ L+ + L  + +++      +++    +EL  DY+R
Sbjct: 977  EYKEKNRRELAEMQRQLKEKTLEAEKSRLTAMKMQDEMRLMEEEL-RDYQR 1026


>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
            sapiens]
          Length = 1935

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 27/137 (19%), Positives = 55/137 (40%), Gaps = 18/137 (13%)

Query: 300  FSREKLMQGFNEDMAIEAQQKFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRL 359
            F    L     ++ A+ +Q + K+ +  AR + E+   L  + +   +    R D+ R L
Sbjct: 1085 FELNALNARIEDEQALGSQLQKKLKELQAR-IEELEEELEAERTARAKVEKLRSDLSREL 1143

Query: 360  -----------------ISPYKKKQRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESF 402
                             I   KK++ +  KMR+ L    L ++     +  +H       
Sbjct: 1144 EEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRKKHADSVAEL 1203

Query: 403  QELVEDYRRVIERLAQE 419
             E +++ +RV ++L +E
Sbjct: 1204 GEQIDNLQRVKQKLEKE 1220


>gi|219521893 coiled-coil transcriptional coactivator isoform 2
           [Homo sapiens]
          Length = 606

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 19/106 (17%)

Query: 314 AIEAQQKFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLISPY---KKKQRDL 370
           ++EA+ K KI K  A    EILRL      +  Q + ++ ++ R   S      + +R+L
Sbjct: 333 SVEAE-KDKILKLSA----EILRLEKAVQEERTQNQVFKTELAREKDSSLVQLSESKREL 387

Query: 371 AKMRKCLRPEELTNQMNQIEISMQHEQLEESFQELVEDYRRVIERL 416
            ++R  LR            +  + EQL+E  QEL+E  R++  RL
Sbjct: 388 TELRSALRV-----------LQKEKEQLQEEKQELLEYMRKLEARL 422


>gi|14149742 coiled-coil transcriptional coactivator isoform 1 [Homo
           sapiens]
          Length = 691

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 19/106 (17%)

Query: 314 AIEAQQKFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLISPY---KKKQRDL 370
           ++EA+ K KI K  A    EILRL      +  Q + ++ ++ R   S      + +R+L
Sbjct: 418 SVEAE-KDKILKLSA----EILRLEKAVQEERTQNQVFKTELAREKDSSLVQLSESKREL 472

Query: 371 AKMRKCLRPEELTNQMNQIEISMQHEQLEESFQELVEDYRRVIERL 416
            ++R  LR            +  + EQL+E  QEL+E  R++  RL
Sbjct: 473 TELRSALRV-----------LQKEKEQLQEEKQELLEYMRKLEARL 507


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.138    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,155,092
Number of Sequences: 37866
Number of extensions: 661148
Number of successful extensions: 1830
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 1786
Number of HSP's gapped (non-prelim): 114
length of query: 419
length of database: 18,247,518
effective HSP length: 105
effective length of query: 314
effective length of database: 14,271,588
effective search space: 4481278632
effective search space used: 4481278632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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