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Search of human proteins with 4503463
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4503463 endothelin 2 preproprotein [Homo sapiens]
(178 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4503463 endothelin 2 preproprotein [Homo sapiens] 372 e-104
gi|154800437 endothelin 1 [Homo sapiens] 95 4e-20
gi|46370060 endothelin 3 isoform 2 preproprotein [Homo sapiens] 89 3e-18
gi|46370064 endothelin 3 isoform 1 preproprotein [Homo sapiens] 86 1e-17
gi|46370062 endothelin 3 isoform 3 preproprotein [Homo sapiens] 86 1e-17
gi|4557545 endothelin 3 isoform 1 preproprotein [Homo sapiens] 86 1e-17
gi|34734062 fibulin 1 isoform C precursor [Homo sapiens] 29 2.4
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 28 3.2
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 28 3.2
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 28 3.2
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 28 3.2
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 28 3.2
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 28 3.2
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 28 3.2
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 28 3.2
gi|239757014 PREDICTED: hypothetical protein [Homo sapiens] 28 4.1
gi|239750123 PREDICTED: hypothetical protein XP_002347295 [Homo ... 28 4.1
gi|239747677 PREDICTED: hypothetical protein [Homo sapiens] 28 4.1
gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo ... 28 4.1
gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo ... 28 4.1
gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo ... 28 4.1
gi|7662034 Sac domain-containing inositol phosphatase 3 [Homo sa... 28 5.4
gi|11545761 potassium channel, subfamily K, member 12 [Homo sapi... 28 5.4
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 27 7.1
gi|239744649 PREDICTED: hypothetical protein XP_002343213 [Homo ... 27 7.1
gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Ho... 27 7.1
gi|20270245 GLI-Kruppel family member GLI4 [Homo sapiens] 27 7.1
gi|53832007 calcium channel, voltage-dependent, L type, alpha 1F... 27 7.1
gi|113416171 PREDICTED: hypothetical protein [Homo sapiens] 27 9.2
gi|169213300 PREDICTED: hypothetical protein [Homo sapiens] 27 9.2
>gi|4503463 endothelin 2 preproprotein [Homo sapiens]
Length = 178
Score = 372 bits (956), Expect = e-104
Identities = 178/178 (100%), Positives = 178/178 (100%)
Query: 1 MVSVPTTWCSVALALLVALHEGKGQAAATLEQPASSSHAQGTHLRLRRCSCSSWLDKECV 60
MVSVPTTWCSVALALLVALHEGKGQAAATLEQPASSSHAQGTHLRLRRCSCSSWLDKECV
Sbjct: 1 MVSVPTTWCSVALALLVALHEGKGQAAATLEQPASSSHAQGTHLRLRRCSCSSWLDKECV 60
Query: 61 YFCHLDIIWVNTPEQTAPYGLGNPPRRRRRSLPRRCQCSSARDPACATFCLRRPWTEAGA 120
YFCHLDIIWVNTPEQTAPYGLGNPPRRRRRSLPRRCQCSSARDPACATFCLRRPWTEAGA
Sbjct: 61 YFCHLDIIWVNTPEQTAPYGLGNPPRRRRRSLPRRCQCSSARDPACATFCLRRPWTEAGA 120
Query: 121 VPSRKSPADVFQTGKTGATTGELLQRLRDISTVKSLFAKRQQEAMREPRSTHSRWRKR 178
VPSRKSPADVFQTGKTGATTGELLQRLRDISTVKSLFAKRQQEAMREPRSTHSRWRKR
Sbjct: 121 VPSRKSPADVFQTGKTGATTGELLQRLRDISTVKSLFAKRQQEAMREPRSTHSRWRKR 178
>gi|154800437 endothelin 1 [Homo sapiens]
Length = 212
Score = 94.7 bits (234), Expect = 4e-20
Identities = 44/75 (58%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Query: 45 RLRRCSCSSWLDKECVYFCHLDIIWVNTPEQTAPYGLGNPPRRR--RRSLP-------RR 95
R +RCSCSS +DKECVYFCHLDIIWVNTPE PYGLG+P +R LP R
Sbjct: 49 RSKRCSCSSLMDKECVYFCHLDIIWVNTPEHVVPYGLGSPRSKRALENLLPTKATDRENR 108
Query: 96 CQCSSARDPACATFC 110
CQC+S +D C FC
Sbjct: 109 CQCASQKDKKCWNFC 123
>gi|46370060 endothelin 3 isoform 2 preproprotein [Homo sapiens]
Length = 219
Score = 88.6 bits (218), Expect = 3e-18
Identities = 58/151 (38%), Positives = 74/151 (49%), Gaps = 26/151 (17%)
Query: 22 GKGQAAATLEQ------PASSSHAQGT--HLRLRRCSCSSWLDKECVYFCHLDIIWVNTP 73
G+G A T Q P A+G H R RRC+C ++ DKECVY+CHLDIIW+NTP
Sbjct: 62 GEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYCHLDIIWINTP 121
Query: 74 EQTAPYGLGN-----PPRRRRRSLP----------RRCQCSSARDPACATFCLRRPWTEA 118
EQT PYGL N +R LP RC C D AC FC + +
Sbjct: 122 EQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLHFCTQTLDVSS 181
Query: 119 GAVPSRKSPADVFQTGKT-GATTGELLQRLR 148
+ + K+ D + GK GA G +RL+
Sbjct: 182 NSRTAEKT--DKEEEGKVRGANRGLCQRRLK 210
>gi|46370064 endothelin 3 isoform 1 preproprotein [Homo sapiens]
Length = 238
Score = 86.3 bits (212), Expect = 1e-17
Identities = 49/112 (43%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 22 GKGQAAATLEQ------PASSSHAQGT--HLRLRRCSCSSWLDKECVYFCHLDIIWVNTP 73
G+G A T Q P A+G H R RRC+C ++ DKECVY+CHLDIIW+NTP
Sbjct: 62 GEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYCHLDIIWINTP 121
Query: 74 EQTAPYGLGN-----PPRRRRRSLP----------RRCQCSSARDPACATFC 110
EQT PYGL N +R LP RC C D AC FC
Sbjct: 122 EQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLHFC 173
>gi|46370062 endothelin 3 isoform 3 preproprotein [Homo sapiens]
Length = 224
Score = 86.3 bits (212), Expect = 1e-17
Identities = 49/112 (43%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 22 GKGQAAATLEQ------PASSSHAQGT--HLRLRRCSCSSWLDKECVYFCHLDIIWVNTP 73
G+G A T Q P A+G H R RRC+C ++ DKECVY+CHLDIIW+NTP
Sbjct: 62 GEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYCHLDIIWINTP 121
Query: 74 EQTAPYGLGN-----PPRRRRRSLP----------RRCQCSSARDPACATFC 110
EQT PYGL N +R LP RC C D AC FC
Sbjct: 122 EQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLHFC 173
>gi|4557545 endothelin 3 isoform 1 preproprotein [Homo sapiens]
Length = 238
Score = 86.3 bits (212), Expect = 1e-17
Identities = 49/112 (43%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 22 GKGQAAATLEQ------PASSSHAQGT--HLRLRRCSCSSWLDKECVYFCHLDIIWVNTP 73
G+G A T Q P A+G H R RRC+C ++ DKECVY+CHLDIIW+NTP
Sbjct: 62 GEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYCHLDIIWINTP 121
Query: 74 EQTAPYGLGN-----PPRRRRRSLP----------RRCQCSSARDPACATFC 110
EQT PYGL N +R LP RC C D AC FC
Sbjct: 122 EQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLHFC 173
>gi|34734062 fibulin 1 isoform C precursor [Homo sapiens]
Length = 683
Score = 28.9 bits (63), Expect = 2.4
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 85 PRRRRRSLPRRCQ---CSSARDPACATFCLRRPWTEAGAVPSRKSPADVFQTGKTGATTG 141
P RRS RC+ C R+ C+ LR + + ++PA VF+ G + A G
Sbjct: 557 PENYRRSAATRCERLPCHENRE--CSKLPLRITYYHLSFPTNIQAPAVVFRMGPSSAVPG 614
Query: 142 ELLQ 145
+ +Q
Sbjct: 615 DSMQ 618
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 28.5 bits (62), Expect = 3.2
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 103 DPACATFCLRRPWTEAGAVPSRKSPADVFQTGKTG--ATTGELLQRLR-DISTVKSLFAK 159
D ACA CL + A + P ++ A + TG AT GEL QR R D T SL
Sbjct: 3155 DVACARGCLDEETSRALSAP--RADAKAYSDPSTGEPATYGELQQRCRPDQLTGLSLLPL 3212
Query: 160 RQQEAMREPRSTHSRWRKR 178
++ A +S + R
Sbjct: 3213 SEKAARARQEELYSELQAR 3231
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 28.5 bits (62), Expect = 3.2
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 103 DPACATFCLRRPWTEAGAVPSRKSPADVFQTGKTG--ATTGELLQRLR-DISTVKSLFAK 159
D ACA CL + A + P ++ A + TG AT GEL QR R D T SL
Sbjct: 3159 DVACARGCLDEETSRALSAP--RADAKAYSDPSTGEPATYGELQQRCRPDQLTGLSLLPL 3216
Query: 160 RQQEAMREPRSTHSRWRKR 178
++ A +S + R
Sbjct: 3217 SEKAARARQEELYSELQAR 3235
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 28.5 bits (62), Expect = 3.2
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 103 DPACATFCLRRPWTEAGAVPSRKSPADVFQTGKTG--ATTGELLQRLR-DISTVKSLFAK 159
D ACA CL + A + P ++ A + TG AT GEL QR R D T SL
Sbjct: 3155 DVACARGCLDEETSRALSAP--RADAKAYSDPSTGEPATYGELQQRCRPDQLTGLSLLPL 3212
Query: 160 RQQEAMREPRSTHSRWRKR 178
++ A +S + R
Sbjct: 3213 SEKAARARQEELYSELQAR 3231
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 28.5 bits (62), Expect = 3.2
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 103 DPACATFCLRRPWTEAGAVPSRKSPADVFQTGKTG--ATTGELLQRLR-DISTVKSLFAK 159
D ACA CL + A + P ++ A + TG AT GEL QR R D T SL
Sbjct: 3123 DVACARGCLDEETSRALSAP--RADAKAYSDPSTGEPATYGELQQRCRPDQLTGLSLLPL 3180
Query: 160 RQQEAMREPRSTHSRWRKR 178
++ A +S + R
Sbjct: 3181 SEKAARARQEELYSELQAR 3199
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 28.5 bits (62), Expect = 3.2
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 103 DPACATFCLRRPWTEAGAVPSRKSPADVFQTGKTG--ATTGELLQRLR-DISTVKSLFAK 159
D ACA CL + A + P ++ A + TG AT GEL QR R D T SL
Sbjct: 3292 DVACARGCLDEETSRALSAP--RADAKAYSDPSTGEPATYGELQQRCRPDQLTGLSLLPL 3349
Query: 160 RQQEAMREPRSTHSRWRKR 178
++ A +S + R
Sbjct: 3350 SEKAARARQEELYSELQAR 3368
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 28.5 bits (62), Expect = 3.2
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 103 DPACATFCLRRPWTEAGAVPSRKSPADVFQTGKTG--ATTGELLQRLR-DISTVKSLFAK 159
D ACA CL + A + P ++ A + TG AT GEL QR R D T SL
Sbjct: 3133 DVACARGCLDEETSRALSAP--RADAKAYSDPSTGEPATYGELQQRCRPDQLTGLSLLPL 3190
Query: 160 RQQEAMREPRSTHSRWRKR 178
++ A +S + R
Sbjct: 3191 SEKAARARQEELYSELQAR 3209
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 28.5 bits (62), Expect = 3.2
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 103 DPACATFCLRRPWTEAGAVPSRKSPADVFQTGKTG--ATTGELLQRLR-DISTVKSLFAK 159
D ACA CL + A + P ++ A + TG AT GEL QR R D T SL
Sbjct: 3141 DVACARGCLDEETSRALSAP--RADAKAYSDPSTGEPATYGELQQRCRPDQLTGLSLLPL 3198
Query: 160 RQQEAMREPRSTHSRWRKR 178
++ A +S + R
Sbjct: 3199 SEKAARARQEELYSELQAR 3217
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 28.5 bits (62), Expect = 3.2
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 103 DPACATFCLRRPWTEAGAVPSRKSPADVFQTGKTG--ATTGELLQRLR-DISTVKSLFAK 159
D ACA CL + A + P ++ A + TG AT GEL QR R D T SL
Sbjct: 3182 DVACARGCLDEETSRALSAP--RADAKAYSDPSTGEPATYGELQQRCRPDQLTGLSLLPL 3239
Query: 160 RQQEAMREPRSTHSRWRKR 178
++ A +S + R
Sbjct: 3240 SEKAARARQEELYSELQAR 3258
>gi|239757014 PREDICTED: hypothetical protein [Homo sapiens]
Length = 281
Score = 28.1 bits (61), Expect = 4.1
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 14/57 (24%)
Query: 84 PPRRRRRSLPRRC--------------QCSSARDPACATFCLRRPWTEAGAVPSRKS 126
P RRR R+L RC S R P+ + LRRPW A V R S
Sbjct: 176 PARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPS 232
>gi|239750123 PREDICTED: hypothetical protein XP_002347295 [Homo
sapiens]
Length = 194
Score = 28.1 bits (61), Expect = 4.1
Identities = 23/66 (34%), Positives = 26/66 (39%), Gaps = 13/66 (19%)
Query: 69 WVNTPEQTAPYGLGNPPRRRRRSLPRRCQCSSARDPAC-------ATFCLRRPWT---EA 118
W P+ A PRRRRR L AR AC A +RRPW+ A
Sbjct: 53 WTVNPKARAAGLRSGAPRRRRRGLSLG---GGARGGACGAGPGLPAPTWVRRPWSSRLSA 109
Query: 119 GAVPSR 124
G P R
Sbjct: 110 GTAPPR 115
>gi|239747677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 28.1 bits (61), Expect = 4.1
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 83 NPPRRRRRS--LPRRCQCSSARDPACATFCLRRPWTEAGAVPSRKSPADVFQTGKTGATT 140
N PRR + S PRRC CSS L RP AG V K P+ G++
Sbjct: 140 NQPRRCQSSGGSPRRCHCSSVPGAPAPASQLPRP---AGEVNKVKYPSAARGPGRSTLGV 196
Query: 141 G 141
G
Sbjct: 197 G 197
>gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo
sapiens]
Length = 598
Score = 28.1 bits (61), Expect = 4.1
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 14/57 (24%)
Query: 84 PPRRRRRSLPRRC--------------QCSSARDPACATFCLRRPWTEAGAVPSRKS 126
P RRR R+L RC S R P+ + LRRPW A V R S
Sbjct: 493 PARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPS 549
>gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo
sapiens]
Length = 616
Score = 28.1 bits (61), Expect = 4.1
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 14/57 (24%)
Query: 84 PPRRRRRSLPRRC--------------QCSSARDPACATFCLRRPWTEAGAVPSRKS 126
P RRR R+L RC S R P+ + LRRPW A V R S
Sbjct: 511 PARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPS 567
>gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo
sapiens]
Length = 262
Score = 28.1 bits (61), Expect = 4.1
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 83 NPPRRRRRS--LPRRCQCSSARDPACATFCLRRPWTEAGAVPSRKSPADVFQTGKTGATT 140
N PRR + S PRRC CSS L RP AG V K P+ G++
Sbjct: 140 NQPRRCQSSGGSPRRCHCSSVPGAPAPASQLPRP---AGEVNKVKYPSAARGPGRSTLGV 196
Query: 141 G 141
G
Sbjct: 197 G 197
>gi|7662034 Sac domain-containing inositol phosphatase 3 [Homo
sapiens]
Length = 907
Score = 27.7 bits (60), Expect = 5.4
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 70 VNTPEQTAPYGLGNPPRRRRRSLPRRCQCSSARDP---ACATFCLRRPWT---EAGAVPS 123
V P++T LGN R L R+ S+ P A ++ T E G+V
Sbjct: 715 VRKPDETGKSVLGNKSNREEAVLQRKTAASAPPPPSEEAVSSSSEDDSGTDREEEGSVSQ 774
Query: 124 RKSPADVFQTGKTGATTGELLQRLRDI 150
R +P + G + T ++Q ++++
Sbjct: 775 RSTPVKMTDAGDSAKVTENVVQPMKEL 801
>gi|11545761 potassium channel, subfamily K, member 12 [Homo
sapiens]
Length = 430
Score = 27.7 bits (60), Expect = 5.4
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 9/30 (30%)
Query: 84 PPRRRRRSLPRRCQCSSARDPACATFCLRR 113
PPRR RR LPR P+C C RR
Sbjct: 9 PPRRSRRRLPR---------PSCCCCCCRR 29
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 27.3 bits (59), Expect = 7.1
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 94 RRCQCSSARDPACATFCLRRPW-TEAGAVPSRKSP 127
R C+ CA+ CL+ PW TE G SR +P
Sbjct: 7902 RSTLCAQPWGRPCASSCLQCPWLTEEGPACSRPAP 7936
>gi|239744649 PREDICTED: hypothetical protein XP_002343213 [Homo
sapiens]
Length = 232
Score = 27.3 bits (59), Expect = 7.1
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 19/86 (22%)
Query: 90 RSLPRRCQCSSARDPACATFCLRRPWTEAGAVPSRKSPADVFQTGKTGATTGELLQRLRD 149
+ LP R PA A C RP++ P+ SP +G +T+ L R+R
Sbjct: 94 QQLPIRLAVPGRSAPAVALAC-SRPFS----TPTSCSPCPTRSSGVRSSTSTSLSSRVRA 148
Query: 150 ISTVKSLFAKRQQEAMREPRSTHSRW 175
+ T S STHS W
Sbjct: 149 VKTKSS--------------STHSTW 160
>gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Homo
sapiens]
Length = 1288
Score = 27.3 bits (59), Expect = 7.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 59 CVYFCHLDIIWVNTPEQTAP 78
C +FC L WV P+ TAP
Sbjct: 609 CQWFCGLIQAWVTNPDSTAP 628
>gi|20270245 GLI-Kruppel family member GLI4 [Homo sapiens]
Length = 376
Score = 27.3 bits (59), Expect = 7.1
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 72 TPEQTAP-YGLGNPPRRRRRSLPRRCQCSSARDPACATFCLRRPWTE-AGAVP 122
+P AP G G R RSLPRR +CS+ P + RP + GAVP
Sbjct: 86 SPGSQAPDEGAGGALRSLLRSLPRRARCSAGFGPESSA---ERPAGQPPGAVP 135
>gi|53832007 calcium channel, voltage-dependent, L type, alpha 1F
subunit [Homo sapiens]
Length = 1977
Score = 27.3 bits (59), Expect = 7.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 74 EQTAPYGLGNPPRRRRRSLPRRCQCSSARDPACATFCL 111
E + GLG P RR + S + +SA+ A FCL
Sbjct: 38 ESSGASGLGTPKRRNQHSKHKTVAVASAQRSPRALFCL 75
>gi|113416171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 265
Score = 26.9 bits (58), Expect = 9.2
Identities = 31/113 (27%), Positives = 40/113 (35%), Gaps = 24/113 (21%)
Query: 31 EQPASSSHAQGTHLRLRR-CSCSSWLDKEC-------------VYFCHLDIIWVNTPEQT 76
++P S A G R RR C+ + C FC + N P
Sbjct: 107 KEPRRQSRATGKSARTRRACASPCRPGRHCGPETARRPRPLAGTTFCGGARVLSNPP--- 163
Query: 77 APYGLGNPPRRRRRSLPRRCQCSSARDPACATFCLRRPWTEAGAVPSRKSPAD 129
P G G R +PRRC+ +SA P F L W P R+S D
Sbjct: 164 -PSGSGGDARPSPL-VPRRCRATSASLPQETPFALSVVW-----APRRRSQGD 209
>gi|169213300 PREDICTED: hypothetical protein [Homo sapiens]
Length = 198
Score = 26.9 bits (58), Expect = 9.2
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 86 RRRRRSLPRRCQCSSARDPACAT----FCLRRPWTEAGAVPSRKSPA 128
R RR RR + SS P+ A +C RRP T + + PSR A
Sbjct: 128 RSLRRWEARRTRSSSVLWPSMACTSPRYCTRRPHTSSMSAPSRACAA 174
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.130 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,166,660
Number of Sequences: 37866
Number of extensions: 389711
Number of successful extensions: 1076
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1049
Number of HSP's gapped (non-prelim): 40
length of query: 178
length of database: 18,247,518
effective HSP length: 96
effective length of query: 82
effective length of database: 14,612,382
effective search space: 1198215324
effective search space used: 1198215324
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.