Guide to the Human Genome
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Search of human proteins with 4503059

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4503059 crystallin, beta A4 [Homo sapiens]
         (196 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4503059 crystallin, beta A4 [Homo sapiens]                         426   e-120
gi|12056461 crystallin, beta A3 [Homo sapiens]                        300   7e-82
gi|16936542 crystallin, beta A2 [Homo sapiens]                        221   3e-58
gi|16936540 crystallin, beta A2 [Homo sapiens]                        221   3e-58
gi|7019357 crystallin, beta A2 [Homo sapiens]                         221   3e-58
gi|4503061 crystallin, beta B1 [Homo sapiens]                         165   2e-41
gi|4503063 crystallin, beta B2 [Homo sapiens]                         150   7e-37
gi|4758074 crystallin, beta B3 [Homo sapiens]                         146   1e-35
gi|148491074 crystallin, gamma B [Homo sapiens]                       110   1e-24
gi|10518338 crystallin, gamma C [Homo sapiens]                        110   1e-24
gi|89886227 absent in melanoma 1-like [Homo sapiens]                  107   8e-24
gi|148491057 crystallin, gamma A [Homo sapiens]                       102   3e-22
gi|8922120 crystallin, gamma S [Homo sapiens]                          99   2e-21
gi|62988361 absent in melanoma 1 [Homo sapiens]                        97   9e-21
gi|13377002 crystallin, gamma D [Homo sapiens]                         95   3e-20
gi|90403579 beta-gamma crystallin domain containing 3 [Homo sapi...    89   3e-18
gi|21389517 gammaN-crystallin [Homo sapiens]                           85   3e-17
gi|24234683 ubiquitin specific peptidase 11 [Homo sapiens]             28   5.0  
gi|4826764 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 1...    27   8.5  
gi|94721268 villin-like protein [Homo sapiens]                         27   8.5  

>gi|4503059 crystallin, beta A4 [Homo sapiens]
          Length = 196

 Score =  426 bits (1096), Expect = e-120
 Identities = 196/196 (100%), Positives = 196/196 (100%)

Query: 1   MTLQCTKSAGPWKMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHA 60
           MTLQCTKSAGPWKMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHA
Sbjct: 1   MTLQCTKSAGPWKMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHA 60

Query: 61  GFQGQQYILERGEYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKG 120
           GFQGQQYILERGEYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKG
Sbjct: 61  GFQGQQYILERGEYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKG 120

Query: 121 ELSDDYPSLQAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWG 180
           ELSDDYPSLQAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWG
Sbjct: 121 ELSDDYPSLQAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWG 180

Query: 181 SHAPTFQVQSIRRIQQ 196
           SHAPTFQVQSIRRIQQ
Sbjct: 181 SHAPTFQVQSIRRIQQ 196


>gi|12056461 crystallin, beta A3 [Homo sapiens]
          Length = 215

 Score =  300 bits (767), Expect = 7e-82
 Identities = 129/189 (68%), Positives = 157/189 (83%)

Query: 8   SAGPWKMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQY 67
           S GPWK+ ++D++ FQG+R EFT+ CP+V E  F+ VRSLKV SGAW+G+EH  F GQQ+
Sbjct: 27  SLGPWKITIYDQENFQGKRMEFTSSCPNVSERSFDNVRSLKVESGAWIGYEHTSFCGQQF 86

Query: 68  ILERGEYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKGELSDDYP 127
           ILERGEYP WDAW G+ AY  ERL SFRP   ANH++S++TIFE+ENF+G++ E+SDDYP
Sbjct: 87  ILERGEYPRWDAWSGSNAYHIERLMSFRPICSANHKESKMTIFEKENFIGRQWEISDDYP 146

Query: 128 SLQAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQ 187
           SLQAMGW  NEVGS  + SGAWVC Q+PGYRG+QY+LECDHH GDYKH+REWGSHA T Q
Sbjct: 147 SLQAMGWFNNEVGSMKIQSGAWVCYQYPGYRGYQYILECDHHGGDYKHWREWGSHAQTSQ 206

Query: 188 VQSIRRIQQ 196
           +QSIRRIQQ
Sbjct: 207 IQSIRRIQQ 215



 Score = 62.4 bits (150), Expect = 2e-10
 Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 6/85 (7%)

Query: 5   CTKSAGPWKMVVWDEDGFQGRRHEFTAECPSVLELGF--ETVRSLKVLSGAWVGFEHAGF 62
           C+ +    KM +++++ F GR+ E + + PS+  +G+    V S+K+ SGAWV +++ G+
Sbjct: 117 CSANHKESKMTIFEKENFIGRQWEISDDYPSLQAMGWFNNEVGSMKIQSGAWVCYQYPGY 176

Query: 63  QGQQYILE----RGEYPSWDAWGGN 83
           +G QYILE     G+Y  W  WG +
Sbjct: 177 RGYQYILECDHHGGDYKHWREWGSH 201


>gi|16936542 crystallin, beta A2 [Homo sapiens]
          Length = 197

 Score =  221 bits (563), Expect = 3e-58
 Identities = 102/186 (54%), Positives = 134/186 (72%), Gaps = 1/186 (0%)

Query: 11  PWKMVVWDEDGFQGRRHEFTAECPSVLELG-FETVRSLKVLSGAWVGFEHAGFQGQQYIL 69
           P  + +WDE+ FQGRR    ++C +V E G    VRS+KV +G WV FE+  FQGQQ+IL
Sbjct: 11  PASLTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFIL 70

Query: 70  ERGEYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKGELSDDYPSL 129
           E+G+YP W AW G++++ + +L SFRP  CANH DSR+T+FE +NF G K +L DDYPSL
Sbjct: 71  EKGDYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDSRVTLFEGDNFQGCKFDLVDDYPSL 130

Query: 130 QAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQVQ 189
            +MGW   +VGS  V SGAWV  Q+PGYRG+QYVLE D HSG++  + E G+ A T Q+Q
Sbjct: 131 PSMGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLERDRHSGEFCTYGELGTQAHTGQLQ 190

Query: 190 SIRRIQ 195
           SIRR+Q
Sbjct: 191 SIRRVQ 196


>gi|16936540 crystallin, beta A2 [Homo sapiens]
          Length = 197

 Score =  221 bits (563), Expect = 3e-58
 Identities = 102/186 (54%), Positives = 134/186 (72%), Gaps = 1/186 (0%)

Query: 11  PWKMVVWDEDGFQGRRHEFTAECPSVLELG-FETVRSLKVLSGAWVGFEHAGFQGQQYIL 69
           P  + +WDE+ FQGRR    ++C +V E G    VRS+KV +G WV FE+  FQGQQ+IL
Sbjct: 11  PASLTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFIL 70

Query: 70  ERGEYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKGELSDDYPSL 129
           E+G+YP W AW G++++ + +L SFRP  CANH DSR+T+FE +NF G K +L DDYPSL
Sbjct: 71  EKGDYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDSRVTLFEGDNFQGCKFDLVDDYPSL 130

Query: 130 QAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQVQ 189
            +MGW   +VGS  V SGAWV  Q+PGYRG+QYVLE D HSG++  + E G+ A T Q+Q
Sbjct: 131 PSMGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLERDRHSGEFCTYGELGTQAHTGQLQ 190

Query: 190 SIRRIQ 195
           SIRR+Q
Sbjct: 191 SIRRVQ 196


>gi|7019357 crystallin, beta A2 [Homo sapiens]
          Length = 197

 Score =  221 bits (563), Expect = 3e-58
 Identities = 102/186 (54%), Positives = 134/186 (72%), Gaps = 1/186 (0%)

Query: 11  PWKMVVWDEDGFQGRRHEFTAECPSVLELG-FETVRSLKVLSGAWVGFEHAGFQGQQYIL 69
           P  + +WDE+ FQGRR    ++C +V E G    VRS+KV +G WV FE+  FQGQQ+IL
Sbjct: 11  PASLTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFIL 70

Query: 70  ERGEYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKGELSDDYPSL 129
           E+G+YP W AW G++++ + +L SFRP  CANH DSR+T+FE +NF G K +L DDYPSL
Sbjct: 71  EKGDYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDSRVTLFEGDNFQGCKFDLVDDYPSL 130

Query: 130 QAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQVQ 189
            +MGW   +VGS  V SGAWV  Q+PGYRG+QYVLE D HSG++  + E G+ A T Q+Q
Sbjct: 131 PSMGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLERDRHSGEFCTYGELGTQAHTGQLQ 190

Query: 190 SIRRIQ 195
           SIRR+Q
Sbjct: 191 SIRRVQ 196


>gi|4503061 crystallin, beta B1 [Homo sapiens]
          Length = 252

 Score =  165 bits (418), Expect = 2e-41
 Identities = 83/187 (44%), Positives = 128/187 (68%), Gaps = 11/187 (5%)

Query: 10  GPWKMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQYIL 69
           G +++VV++ + FQGRR EF+ EC ++ + GF+ VRS+ V +G WV FE + F+G+ +IL
Sbjct: 57  GNYRLVVFELENFQGRRAEFSGECSNLADRGFDRVRSIIVSAGPWVAFEQSNFRGEMFIL 116

Query: 70  ERGEYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKGEL-SDDYPS 128
           E+GEYP W+ W  +++Y ++RL SFRP    + ++ ++++FE  NF G   E+  DD PS
Sbjct: 117 EKGEYPRWNTW--SSSYRSDRLMSFRPIK-MDAQEHKISLFEGANFKGNTIEIQGDDAPS 173

Query: 129 LQAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQV 188
           L   G+  + VGS  V SG WV  Q+PGYRG+QY+LE     GD++H+ EWG+  P  Q+
Sbjct: 174 LWVYGF-SDRVGSVKVSSGTWVGYQYPGYRGYQYLLE----PGDFRHWNEWGAFQP--QM 226

Query: 189 QSIRRIQ 195
           QS+RR++
Sbjct: 227 QSLRRLR 233


>gi|4503063 crystallin, beta B2 [Homo sapiens]
          Length = 205

 Score =  150 bits (379), Expect = 7e-37
 Identities = 77/184 (41%), Positives = 116/184 (63%), Gaps = 11/184 (5%)

Query: 13  KMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQYILERG 72
           K+++++++ FQG  HE    CP++ E G E   S+ V +G WVG+E A  +G+Q++ E+G
Sbjct: 18  KIIIFEQENFQGHSHELNGPCPNLKETGVEKAGSVLVQAGPWVGYEQANCKGEQFVFEKG 77

Query: 73  EYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKGE-LSDDYPSLQA 131
           EYP WD+W   ++   + L+S RP    + ++ ++ ++E  NF GKK E + DD PS  A
Sbjct: 78  EYPRWDSW--TSSRRTDSLSSLRPIK-VDSQEHKIILYENPNFTGKKMEIIDDDVPSFHA 134

Query: 132 MGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQVQSI 191
            G++  +V S  V SG WV  Q+PGYRG QY+LE     GDYK   ++G  AP  QVQS+
Sbjct: 135 HGYQ-EKVSSVRVQSGTWVGYQYPGYRGLQYLLE----KGDYKDSSDFG--APHPQVQSV 187

Query: 192 RRIQ 195
           RRI+
Sbjct: 188 RRIR 191


>gi|4758074 crystallin, beta B3 [Homo sapiens]
          Length = 211

 Score =  146 bits (369), Expect = 1e-35
 Identities = 78/187 (41%), Positives = 119/187 (63%), Gaps = 11/187 (5%)

Query: 10  GPWKMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQYIL 69
           G +K+++++ + FQG+R E +AECPS+ +   E V S++V SG W+ FE   F+G+Q++L
Sbjct: 22  GSYKVILYELENFQGKRCELSAECPSLTDSLLEKVGSIQVESGPWLAFESRAFRGEQFVL 81

Query: 70  ERGEYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKGEL-SDDYPS 128
           E+G+YP WDAW  + +  ++ L S RP    +    +L +FE   F G+K E+  DD PS
Sbjct: 82  EKGDYPRWDAW--SNSRDSDSLLSLRPLN-IDSPHHKLHLFENPAFSGRKMEIVDDDVPS 138

Query: 129 LQAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQV 188
           L A G++ + V S    +G WV  +FPGYRG QYV E     G+Y+H+ EW +  P  Q+
Sbjct: 139 LWAHGFQ-DRVASVRAINGTWVGYEFPGYRGRQYVFE----RGEYRHWNEWDASQP--QL 191

Query: 189 QSIRRIQ 195
           QS+RRI+
Sbjct: 192 QSVRRIR 198


>gi|148491074 crystallin, gamma B [Homo sapiens]
          Length = 175

 Score =  110 bits (274), Expect = 1e-24
 Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 19/185 (10%)

Query: 13  KMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQYILERG 72
           K+  +++  FQGR +E T +CP+ L+  F    S++V SG W+ +E   +QG QY L RG
Sbjct: 3   KITFYEDRAFQGRSYECTTDCPN-LQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRG 61

Query: 73  EYPSWDAWGGNTAYPAERLTSFRPAACANHRDS---RLTIFEQENFLGKKGELSDDYPSL 129
           EYP +  W G        L+    + C     S   R+ I++++   G+  EL+DD  S+
Sbjct: 62  EYPDYQQWMG--------LSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISV 113

Query: 130 QAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQVQ 189
           Q   +   E+ S +V  G+W+  + P YRG QY+L      G+Y+ F +WG  AP  +V 
Sbjct: 114 QDR-FHLTEIHSLNVLEGSWILYEMPNYRGRQYLL----RPGEYRRFLDWG--APNAKVG 166

Query: 190 SIRRI 194
           S+RR+
Sbjct: 167 SLRRV 171


>gi|10518338 crystallin, gamma C [Homo sapiens]
          Length = 174

 Score =  110 bits (274), Expect = 1e-24
 Identities = 65/182 (35%), Positives = 102/182 (56%), Gaps = 14/182 (7%)

Query: 13  KMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQYILERG 72
           K+  +++  FQGR +E T +CP+ L+  F    S++V SG W+ +E   +QGQQY+L RG
Sbjct: 3   KITFYEDRAFQGRSYETTTDCPN-LQPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRRG 61

Query: 73  EYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKGELSDDYPSLQAM 132
           EYP +  W G +   + R     P   ++    RL ++E+E+  G   ELS+D PS+Q  
Sbjct: 62  EYPDYQQWMGLS--DSIRSCCLIPQTVSH----RLRLYEREDHKGLMMELSEDCPSIQDR 115

Query: 133 GWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQVQSIR 192
            +  +E+ S HV  G WV  + P YRG QY+L       +Y+  ++WG  A   +  S+R
Sbjct: 116 -FHLSEIRSLHVLEGCWVLYELPNYRGRQYLL----RPQEYRRCQDWG--AMDAKAGSLR 168

Query: 193 RI 194
           R+
Sbjct: 169 RV 170


>gi|89886227 absent in melanoma 1-like [Homo sapiens]
          Length = 616

 Score =  107 bits (266), Expect = 8e-24
 Identities = 69/189 (36%), Positives = 97/189 (51%), Gaps = 18/189 (9%)

Query: 1   MTLQC--TKSAGPWKMVVWDEDGFQGRRHEFTAECPSVLELG------FETVRSLKVLSG 52
           M L C   +  G  + VV++  GFQGR  E + +  ++ +          +V SL+VL G
Sbjct: 110 MRLGCPSVEKPGEPRAVVYEAPGFQGRSWEVSRDIYNLQQPEDSQSPHLASVGSLRVLGG 169

Query: 53  AWVGFEHAGFQGQQYILERGEYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQ 112
            WVG+E  GF+G QY+LE GEYP W  WGG      E LTS R     +  D  + +FE 
Sbjct: 170 CWVGYEKEGFRGHQYLLEEGEYPDWSHWGGYD----ELLTSLR-VIRTDFGDPAVVLFEA 224

Query: 113 ENFLGKKGELSDDYPSLQAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGD 172
            +F G   E+S   P ++ +   G    + HV SG WV  Q  G+ G QYVLE     G 
Sbjct: 225 MDFEGHGVEVSKALPDVELV-QHGPSTQAIHVLSGVWVAYQEVGFSGEQYVLE----KGV 279

Query: 173 YKHFREWGS 181
           Y++  +WG+
Sbjct: 280 YRNCEDWGA 288



 Score = 73.9 bits (180), Expect = 8e-14
 Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 13/156 (8%)

Query: 14  MVVWDEDGFQGRRHEFTAECPSV-LELGFETVRSLKVLSGAWVGFEHAGFQGQQYILERG 72
           +V+++   F+G   E +   P V L     + +++ VLSG WV ++  GF G+QY+LE+G
Sbjct: 219 VVLFEAMDFEGHGVEVSKALPDVELVQHGPSTQAIHVLSGVWVAYQEVGFSGEQYVLEKG 278

Query: 73  EYPSWDAWGGNTAYPAERLTSFRPAACANHRD----SRLTIFEQENFLGKKGELSDDYPS 128
            Y + + WG   +     L S +P       D    S++ +F + +FLG      DD  +
Sbjct: 279 VYRNCEDWGAGNS----TLASLQPVLQVGEHDLHFVSKIQLFSRPDFLGDHFSFEDDQAA 334

Query: 129 LQAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVL 164
           L A         S  VH G+W+      + G Q++L
Sbjct: 335 LPA----SFRPQSCRVHGGSWILFDETNFEGDQHIL 366



 Score = 73.2 bits (178), Expect = 1e-13
 Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 32/195 (16%)

Query: 10  GPWKMVVWD----------EDGFQGRRHEFTAECPSVLELGFET---VRSLKVLSGAWVG 56
           G  + VVWD          E+G +G + + T    +    G E    V S  V +G W+ 
Sbjct: 16  GSLRRVVWDYSTPEISLFSEEGLKGEQVKLTEALKN--SQGLEKPLQVASATVSAGLWLL 73

Query: 57  FEHAGFQGQQYILERGEYPSWDAWGGNTAYPAERLTSFRP-----AACANHRDSRLTIFE 111
           +    F+   YILE GEYP+ +AWG  T+ P+  + S +P      +     + R  ++E
Sbjct: 74  YPKPLFEDTPYILEPGEYPTSEAWG--TSDPS--VGSLKPMRLGCPSVEKPGEPRAVVYE 129

Query: 112 QENFLGKKGELSDDYPSLQ----AMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECD 167
              F G+  E+S D  +LQ    +       VGS  V  G WV  +  G+RG QY+LE  
Sbjct: 130 APGFQGRSWEVSRDIYNLQQPEDSQSPHLASVGSLRVLGGCWVGYEKEGFRGHQYLLE-- 187

Query: 168 HHSGDYKHFREWGSH 182
              G+Y  +  WG +
Sbjct: 188 --EGEYPDWSHWGGY 200



 Score = 62.4 bits (150), Expect = 2e-10
 Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 14/153 (9%)

Query: 45  RSLKVLSGAWVGFEHAGFQGQQYILERGEYPSWDAWGGNTAYPAERLTSFRPAACANHRD 104
           +S +V  G+W+ F+   F+G Q+IL  GE+P+  A G      A  +         +  +
Sbjct: 342 QSCRVHGGSWILFDETNFEGDQHILSEGEFPTLTAMG----CLASTVLGSLQKVSLHFSE 397

Query: 105 SRLTIFEQENFLGKKGELSDDYPSLQAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVL 164
             + ++  E F GK+ ELS +  SLQA G+  N V S  +  G WV  +   +RG Q+++
Sbjct: 398 PSIFLYGLECFEGKEIELSREVRSLQAEGF-NNHVLSVRIKGGIWVLCEHSDFRGRQWLV 456

Query: 165 -ECDHHSGDYKHFREWGSHAPTFQVQSIRRIQQ 196
             C+           W +++ T +V S+  I+Q
Sbjct: 457 GSCE--------ITNWLTYSGTQRVGSLYPIKQ 481



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 22  FQGRRHEFTAECPSVLELGFET-VRSLKVLSGAWVGFEHAGFQGQQYILERGEYPSWDAW 80
           F+G+  E + E  S+   GF   V S+++  G WV  EH+ F+G+Q+++   E  +W  +
Sbjct: 408 FEGKEIELSREVRSLQAEGFNNHVLSVRIKGGIWVLCEHSDFRGRQWLVGSCEITNWLTY 467

Query: 81  GG 82
            G
Sbjct: 468 SG 469


>gi|148491057 crystallin, gamma A [Homo sapiens]
          Length = 174

 Score =  102 bits (253), Expect = 3e-22
 Identities = 59/183 (32%), Positives = 97/183 (53%), Gaps = 16/183 (8%)

Query: 13  KMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQYILERG 72
           K+  +++  FQGR +   ++CP+ L + F    S++V SG W+ +E   +QG QY L RG
Sbjct: 3   KITFYEDRDFQGRCYNCISDCPN-LRVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRRG 61

Query: 73  EYPSWDAWGGNTAYPAERLTSFRPAACANHRDS-RLTIFEQENFLGKKGELSDDYPSLQA 131
           +YP +  W G +        S +      H  S +L ++E++++ G   EL+DD   +  
Sbjct: 62  KYPDYQHWMGLS-------DSVQSCRIIPHTSSHKLRLYERDDYRGLMSELTDDCACVPE 114

Query: 132 MGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQVQSI 191
           + +   E+ S HV  G WV  + P YRG QY+L      GDY+ + +WG      +V S+
Sbjct: 115 L-FRLPEIYSLHVLEGCWVLYEMPNYRGRQYLL----RPGDYRRYHDWG--GADAKVGSL 167

Query: 192 RRI 194
           RR+
Sbjct: 168 RRV 170


>gi|8922120 crystallin, gamma S [Homo sapiens]
          Length = 178

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 12/182 (6%)

Query: 13  KMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQYILERG 72
           K+  +++  FQGRR++   +C            S+KV  G W  +E   F G  YIL +G
Sbjct: 7   KITFYEDKNFQGRRYDCDCDCAD-FHTYLSRCNSIKVEGGTWAVYERPNFAGYMYILPQG 65

Query: 73  EYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKGELSDDYPSLQAM 132
           EYP +  W G      +RL+S R     +    ++ IFE+ +F G+  E ++D PS+   
Sbjct: 66  EYPEYQRWMGLN----DRLSSCRAVHLPSGGQYKIQIFEKGDFSGQMYETTEDCPSIMEQ 121

Query: 133 GWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQVQSIR 192
            +   E+ S  V  G W+  + P YRG QY+L+      +Y+   +WG+ +P   VQS R
Sbjct: 122 -FHMREIHSCKVLEGVWIFYELPNYRGRQYLLD----KKEYRKPIDWGAASPA--VQSFR 174

Query: 193 RI 194
           RI
Sbjct: 175 RI 176



 Score = 62.0 bits (149), Expect = 3e-10
 Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 5/89 (5%)

Query: 8   SAGPWKMVVWDEDGFQGRRHEFTAECPSVLE-LGFETVRSLKVLSGAWVGFEHAGFQGQQ 66
           S G +K+ ++++  F G+ +E T +CPS++E      + S KVL G W+ +E   ++G+Q
Sbjct: 90  SGGQYKIQIFEKGDFSGQMYETTEDCPSIMEQFHMREIHSCKVLEGVWIFYELPNYRGRQ 149

Query: 67  YILERGEYPSWDAWGGNTAYPAERLTSFR 95
           Y+L++ EY     WG   A PA  + SFR
Sbjct: 150 YLLDKKEYRKPIDWG--AASPA--VQSFR 174


>gi|62988361 absent in melanoma 1 [Homo sapiens]
          Length = 1723

 Score = 97.1 bits (240), Expect = 9e-21
 Identities = 67/184 (36%), Positives = 96/184 (52%), Gaps = 27/184 (14%)

Query: 13   KMVVWDEDGFQGRRHEF-TAECPSVLELG------------FETVRSLKVLSGAWVGFEH 59
            K+VV+++  F+G+  E  T  C  V+E G            F +V S+KVL G WV +E 
Sbjct: 1219 KVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGDDHLPFTSVGSMKVLRGIWVAYEK 1278

Query: 60   AGFQGQQYILERGEYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKK 119
             GF G QY+LE GEY  W AWGG   Y  E L S RP    +  ++ + ++ ++NF G K
Sbjct: 1279 PGFTGHQYLLEEGEYRDWKAWGG---YNGE-LQSLRP-ILGDFSNAHMIMYSEKNF-GSK 1332

Query: 120  GELSD---DYPSLQAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHF 176
            G   D      +L+  G+ G +  S +V SG WV  + P + G QY+L+     G Y  F
Sbjct: 1333 GSSIDVLGIVANLKETGY-GVKTQSINVLSGVWVAYENPDFTGEQYILD----KGFYTSF 1387

Query: 177  REWG 180
             +WG
Sbjct: 1388 EDWG 1391



 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 56/165 (33%), Positives = 78/165 (47%), Gaps = 26/165 (15%)

Query: 46   SLKVLSGAWVGFEHAGFQGQQYILERGEYPSWDAWGGNTAYPAERLTSFRPAACANHR-- 103
            S+KV  G W+ +E  GFQG  +ILE GEYP    W    AY    + S RP      +  
Sbjct: 1158 SMKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEAAY----IGSMRPLKMGGRKVE 1213

Query: 104  ---DSRLTIFEQENFLGKKGELSDDYPSLQAMGWEGNE-----------VGSFHVHSGAW 149
               D ++ ++E+  F GK  EL     S    G E  E           VGS  V  G W
Sbjct: 1214 FPTDPKVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGDDHLPFTSVGSMKVLRGIW 1273

Query: 150  VCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQVQSIRRI 194
            V  + PG+ G QY+LE     G+Y+ ++ WG +    ++QS+R I
Sbjct: 1274 VAYEKPGFTGHQYLLE----EGEYRDWKAWGGY--NGELQSLRPI 1312



 Score = 76.3 bits (186), Expect = 2e-14
 Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 7/149 (4%)

Query: 16   VWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQYILERGEYP 75
            ++ E  FQG    F  E  S ++  F T +S +V  G+WV ++   F G QY+LE G YP
Sbjct: 1419 LFSEPQFQGHSQSFE-ETTSQIDDSFST-KSCRVSGGSWVVYDGENFTGNQYVLEEGHYP 1476

Query: 76   SWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKGELSDDYPSLQAMGWE 135
               A G     P     S R        +  + +FE+E+F GKK EL+ +  +L+++G+ 
Sbjct: 1477 CLSAMG---CPPGATFKSLR-FIDVEFSEPTIILFEREDFKGKKIELNAETVNLRSLGF- 1531

Query: 136  GNEVGSFHVHSGAWVCSQFPGYRGFQYVL 164
              ++ S  V  G WV  ++  YRG Q++L
Sbjct: 1532 NTQIRSVQVIGGIWVTYEYGSYRGRQFLL 1560



 Score = 68.6 bits (166), Expect = 3e-12
 Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 15/163 (9%)

Query: 14   MVVWDEDGF--QGRRHEFTAECPSVLELGFET-VRSLKVLSGAWVGFEHAGFQGQQYILE 70
            M+++ E  F  +G   +      ++ E G+    +S+ VLSG WV +E+  F G+QYIL+
Sbjct: 1321 MIMYSEKNFGSKGSSIDVLGIVANLKETGYGVKTQSINVLSGVWVAYENPDFTGEQYILD 1380

Query: 71   RGEYPSWDAWGGNTAYPAERLTSFRPAACAN----HRDSRLTIFEQENFLGKKGELSDDY 126
            +G Y S++ WGG       +++S +P    +     R +++ +F +  F G      +  
Sbjct: 1381 KGFYTSFEDWGGKNC----KISSVQPICLDSFTGPRRRNQIHLFSEPQFQGHSQSFEETT 1436

Query: 127  PSLQAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHH 169
              +     +     S  V  G+WV      + G QYVLE  H+
Sbjct: 1437 SQID----DSFSTKSCRVSGGSWVVYDGENFTGNQYVLEEGHY 1475



 Score = 61.2 bits (147), Expect = 5e-10
 Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 13/181 (7%)

Query: 11   PWKMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQYILE 70
            P K+V++ E     +  E  ++           V  +KV+ G W+ +E   F+G    LE
Sbjct: 1021 PGKVVIYSEPDVSEKCIEVFSDIQDCSSWSLSPVILIKVVRGCWILYEQPNFEGHSIPLE 1080

Query: 71   RGEYPSWDAWG-GNTAYPAERLTSFRPAACA-------NHRDSRLTIFEQENFLGKKGEL 122
             GE      WG  +     E   S +P           ++R S + +F +   LG     
Sbjct: 1081 EGELELSGLWGIEDILERHEEAESDKPVVIGSIRHVVQDYRVSHIDLFTEPEGLGILSSY 1140

Query: 123  SDDYPSLQAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSH 182
             DD   +Q  G    +  S  VH G W+  + PG++G  ++LE     G+Y     W + 
Sbjct: 1141 FDDTEEMQGFG-VMQKTCSMKVHWGTWLIYEEPGFQGVPFILE----PGEYPDLSFWDTE 1195

Query: 183  A 183
            A
Sbjct: 1196 A 1196



 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 26/84 (30%), Positives = 52/84 (61%), Gaps = 6/84 (7%)

Query: 14   MVVWDEDGFQGRRHEFTAECPSVLELGFET-VRSLKVLSGAWVGFEHAGFQGQQYILERG 72
            +++++ + F+G++ E  AE  ++  LGF T +RS++V+ G WV +E+  ++G+Q++L   
Sbjct: 1504 IILFEREDFKGKKIELNAETVNLRSLGFNTQIRSVQVIGGIWVTYEYGSYRGRQFLLSPA 1563

Query: 73   EYPSWDAWGGNTAYPAERLTSFRP 96
            E P+W  + G       ++ S RP
Sbjct: 1564 EVPNWYEFSG-----CRQIGSLRP 1582


>gi|13377002 crystallin, gamma D [Homo sapiens]
          Length = 174

 Score = 95.1 bits (235), Expect = 3e-20
 Identities = 59/183 (32%), Positives = 98/183 (53%), Gaps = 16/183 (8%)

Query: 13  KMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQYILERG 72
           K+ ++++ GFQGR +E +++ P+ L+       S +V SG W+ +E   + G QY L RG
Sbjct: 3   KITLYEDRGFQGRHYECSSDHPN-LQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRG 61

Query: 73  EYPSWDAWGGNTAYPAERLTSFRPAACANHRDS-RLTIFEQENFLGKKGELSDDYPSLQA 131
           +Y     W G +        S R      H  S R+ ++E+E++ G+  E ++D   LQ 
Sbjct: 62  DYADHQQWMGLS-------DSVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQD 114

Query: 132 MGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQVQSI 191
             +  NE+ S +V  G+WV  +   YRG QY+L      GDY+ +++WG  A   +V S+
Sbjct: 115 R-FRFNEIHSLNVLEGSWVLYELSNYRGRQYLL----MPGDYRRYQDWG--ATNARVGSL 167

Query: 192 RRI 194
           RR+
Sbjct: 168 RRV 170



 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 24/78 (30%), Positives = 47/78 (60%), Gaps = 1/78 (1%)

Query: 9   AGPWKMVVWDEDGFQGRRHEFTAECPSVLE-LGFETVRSLKVLSGAWVGFEHAGFQGQQY 67
           +G  ++ +++ + ++G+  EFT +C  + +   F  + SL VL G+WV +E + ++G+QY
Sbjct: 85  SGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNYRGRQY 144

Query: 68  ILERGEYPSWDAWGGNTA 85
           +L  G+Y  +  WG   A
Sbjct: 145 LLMPGDYRRYQDWGATNA 162


>gi|90403579 beta-gamma crystallin domain containing 3 [Homo
           sapiens]
          Length = 1022

 Score = 88.6 bits (218), Expect = 3e-18
 Identities = 61/189 (32%), Positives = 101/189 (53%), Gaps = 18/189 (9%)

Query: 13  KMVVWDEDGFQGRRHEFTAECPSVLEL-----GFETVRSLKVLSGAWVGFEHAGFQGQQY 67
           K++++++  F G+  EF+    SV         F  + S++V+ G WV +E   F+GQQ+
Sbjct: 532 KVIIYEKPHFHGQAKEFSEHIDSVPNFLKNNGDFHRIGSIRVIGGVWVAYEKEHFKGQQF 591

Query: 68  ILERGEYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKGELSD-DY 126
           +LE G++   +A G  ++     + SFR    AN  +S +T+FE +   GK  ++++ + 
Sbjct: 592 LLEEGDFEDSNACGALSS----PILSFRYLQ-ANFIESSVTLFESDLESGKFIDITNQEI 646

Query: 127 PSLQAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTF 186
             L+ +G+ G++  S HV SG WV  Q   + G QY+LE     G YK F +WG      
Sbjct: 647 SDLEEIGF-GSKTRSIHVKSGVWVAYQQKFFCGEQYILE----KGKYKCFFDWGGSNNI- 700

Query: 187 QVQSIRRIQ 195
            + SIR IQ
Sbjct: 701 -IMSIRPIQ 708



 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 14/165 (8%)

Query: 32  ECPSVLELGFET-VRSLKVLSGAWVGFEHAGFQGQQYILERGEYPSWDAWGG-NTAYPAE 89
           E   + E+GF +  RS+ V SG WV ++   F G+QYILE+G+Y  +  WGG N    + 
Sbjct: 645 EISDLEEIGFGSKTRSIHVKSGVWVAYQQKFFCGEQYILEKGKYKCFFDWGGSNNIIMSI 704

Query: 90  RLTSFRPAACANHRDSRLTIFEQENFLGKKGELSDDYPSLQAMGWEGNEVGSFHVHSGAW 149
           R     P    N     L  F +  F G+  + +++   L ++        SF V  G W
Sbjct: 705 RPIQLEPLG-INEPPHLLKAFSKPGFQGECIDFTEETSDLTSL-----MPCSFKVLRGCW 758

Query: 150 VCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQVQSIRRI 194
           +      Y+   +V  C    G Y      G   P  +V+S++ I
Sbjct: 759 LLY----YQEDMFVNHCVLEEGLYADLTSCG--CPASKVKSLKPI 797



 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 20/156 (12%)

Query: 34  PSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQYILERGEYPSWDAWGGNTAYPAERLTS 93
           P++ EL      S  V SG W+ +    F+GQ  +LE           G        + S
Sbjct: 463 PNLEELNISKSVSFTVKSGVWLAYPDINFKGQATVLEEDH--------GLFEISTAEMKS 514

Query: 94  FRPAACANHR-----DSRLTIFEQENFLGKKGELS---DDYPSLQAMGWEGNEVGSFHVH 145
             P      +     + ++ I+E+ +F G+  E S   D  P+      + + +GS  V 
Sbjct: 515 LHPLQMGGLKVEMPMNLKVIIYEKPHFHGQAKEFSEHIDSVPNFLKNNGDFHRIGSIRVI 574

Query: 146 SGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGS 181
            G WV  +   ++G Q++LE     GD++     G+
Sbjct: 575 GGVWVAYEKEHFKGQQFLLE----EGDFEDSNACGA 606



 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 11/171 (6%)

Query: 2   TLQCTKSAGPWKMVVWD--EDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEH 59
           TL+C    G  KMV++D  E  +   + E     P      F     +KV+ G W+ +E 
Sbjct: 339 TLRCNPRPG--KMVIYDLHESTY---KQEVYCNIPDATSWSFPNGVLIKVVRGCWILYEK 393

Query: 60  AGFQGQQYILERGEYPSWDAW-GGNTAYPAER-LTSFRPAACANHRDSRLTIFEQENFLG 117
             F+GQ+ +LE GE      W   N  +P    +         +     + +F Q +   
Sbjct: 394 PHFRGQKCVLEEGEKVLNRDWILQNRRHPQRNFILGSLKRVLKDCSIPEIELFPQSDPAC 453

Query: 118 KKGELSDDYPSLQAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDH 168
               +    P+L+ +    ++  SF V SG W+      ++G   VLE DH
Sbjct: 454 CPVYIQRAVPNLEELNI--SKSVSFTVKSGVWLAYPDINFKGQATVLEEDH 502



 Score = 37.4 bits (85), Expect = 0.008
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 23  QGRRHEFTAECPSVL--ELGFETVRSLKVLSGAWVGFEHAGFQGQQYILERGEYPSWDAW 80
           +GR         SVL  +L F T +S+ V SG W+ +E + F G+Q +L   E P+W A+
Sbjct: 815 EGRELHLEEAVNSVLNKDLHFYT-QSVWVKSGLWIAYEGSNFLGRQILLRPNEIPNWTAF 873


>gi|21389517 gammaN-crystallin [Homo sapiens]
          Length = 182

 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 55/152 (36%), Positives = 79/152 (51%), Gaps = 9/152 (5%)

Query: 13  KMVVWDEDGFQGRRHEFTAECPSVLELGF-ETVRSLKVLSGAWVGFEHAGFQGQQYILER 71
           K+ +++   F G++ E   +C +  + GF   V S+ V SGAWV F H  F+GQQ+ILE 
Sbjct: 7   KITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEH 66

Query: 72  GEYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKGELSDDYPSLQA 131
           G+YP +  W  +    ++ + S RP    +    RL IFE  NF G+  E  +D P LQ+
Sbjct: 67  GDYPDFFRWNSH----SDHMGSCRPVG-MHGEHFRLEIFEGCNFTGQCLEFLEDSPFLQS 121

Query: 132 MGWEGNEVGSFHVH--SGAWVCSQFPGYRGFQ 161
            GW  N V +  V+    AW    F G   FQ
Sbjct: 122 RGWVKNCVNTIKVYGDGAAWSPRSF-GAEDFQ 152



 Score = 68.2 bits (165), Expect = 4e-12
 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 5/81 (6%)

Query: 103 RDSRLTIFEQENFLGKKGELSDDYPSLQAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQY 162
           R  ++T++E ++F G+K E+  D  + Q  G+  N V S HV SGAWVC   P +RG Q+
Sbjct: 4   RSGKITLYEGKHFTGQKLEVFGDCDNFQDRGFM-NRVNSIHVESGAWVCFNHPDFRGQQF 62

Query: 163 VLECDHHSGDYKHFREWGSHA 183
           +LE     GDY  F  W SH+
Sbjct: 63  ILE----HGDYPDFFRWNSHS 79


>gi|24234683 ubiquitin specific peptidase 11 [Homo sapiens]
          Length = 963

 Score = 28.1 bits (61), Expect = 5.0
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 19/56 (33%)

Query: 114 NFLGKKGELSDDYPSLQAMGWEG-----------NEVGSFHVHSGAWVCSQFPGYR 158
           N LG KGE+++ Y  L    W G           N+VG F         SQF GY+
Sbjct: 350 NPLGMKGEIAEAYADLVKQAWSGHHRSIVPHVFKNKVGHF--------ASQFLGYQ 397


>gi|4826764 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 1
           precursor [Homo sapiens]
          Length = 307

 Score = 27.3 bits (59), Expect = 8.5
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 8/64 (12%)

Query: 87  PAERLTSFRPAACANHRDSRLTIFEQENFLGKKGELSDDYPSLQAMGWEGNEVGSFHVHS 146
           P+ER+ S       NH          E FL + G L+ DY +L            +HVH 
Sbjct: 149 PSERVLSDYTQVFYNHMQKHKPYPSIEEFLVRDGRLNVDYKALNR--------SLYHVHM 200

Query: 147 GAWV 150
             W+
Sbjct: 201 QNWL 204


>gi|94721268 villin-like protein [Homo sapiens]
          Length = 856

 Score = 27.3 bits (59), Expect = 8.5
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 8/48 (16%)

Query: 63  QGQQYILERGEYPS-WDAWGGNTAYPA-----ERLTSFRPA--ACANH 102
           + ++ +LE  E P  W+A GG   YP+     E + SF+P    C++H
Sbjct: 573 KNEETVLEGQEPPHFWEALGGRAPYPSNKRLPEEVPSFQPRLFECSSH 620


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,244,461
Number of Sequences: 37866
Number of extensions: 373933
Number of successful extensions: 759
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 637
Number of HSP's gapped (non-prelim): 38
length of query: 196
length of database: 18,247,518
effective HSP length: 97
effective length of query: 99
effective length of database: 14,574,516
effective search space: 1442877084
effective search space used: 1442877084
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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