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Search of human proteins with 4502703
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4502703 cell division cycle 6 protein [Homo sapiens]
(560 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4502703 cell division cycle 6 protein [Homo sapiens] 1103 0.0
gi|31795544 origin recognition complex, subunit 1 [Homo sapiens] 170 3e-42
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 42 0.001
gi|194306571 replication factor C 5 isoform 2 [Homo sapiens] 37 0.037
gi|194306567 replication factor C 5 isoform 2 [Homo sapiens] 37 0.037
gi|6677723 replication factor C 5 isoform 1 [Homo sapiens] 37 0.037
gi|31563534 replication factor C 2 isoform 1 [Homo sapiens] 37 0.037
gi|32454748 origin recognition complex subunit 4 [Homo sapiens] 37 0.063
gi|32454746 origin recognition complex subunit 4 [Homo sapiens] 37 0.063
gi|32454750 origin recognition complex subunit 4 [Homo sapiens] 37 0.063
gi|169234742 NACHT and WD repeat domain containing 1 [Homo sapiens] 36 0.11
gi|5453593 adenylyl cyclase-associated protein 2 [Homo sapiens] 35 0.24
gi|32528306 replication factor C large subunit [Homo sapiens] 32 1.2
gi|4758646 kinesin family member 3B [Homo sapiens] 32 1.2
gi|14043024 BCL2-associated athanogene 3 [Homo sapiens] 32 1.2
gi|31881687 replication factor C 4 [Homo sapiens] 32 1.2
gi|4506491 replication factor C 4 [Homo sapiens] 32 1.2
gi|33667040 NLR family, pyrin domain containing 8 [Homo sapiens] 32 1.5
gi|75677353 AAA-ATPase TOB3 [Homo sapiens] 32 1.5
gi|148664197 coiled-coil domain containing 40 [Homo sapiens] 32 1.5
gi|38788274 bromodomain PHD finger transcription factor isoform ... 32 2.0
gi|167621456 kinase suppressor of ras 2 [Homo sapiens] 32 2.0
gi|19718796 RAD17 homolog isoform 1 [Homo sapiens] 31 2.6
gi|19718794 RAD17 homolog isoform 1 [Homo sapiens] 31 2.6
gi|19718792 RAD17 homolog isoform 1 [Homo sapiens] 31 2.6
gi|19718784 RAD17 homolog isoform 1 [Homo sapiens] 31 2.6
gi|4506383 RAD17 homolog isoform 1 [Homo sapiens] 31 2.6
gi|19718786 RAD17 homolog isoform 2 [Homo sapiens] 31 2.6
gi|157057547 Fc receptor-like 6 [Homo sapiens] 31 2.6
gi|223555989 hypothetical protein LOC51101 [Homo sapiens] 31 3.4
>gi|4502703 cell division cycle 6 protein [Homo sapiens]
Length = 560
Score = 1103 bits (2852), Expect = 0.0
Identities = 560/560 (100%), Positives = 560/560 (100%)
Query: 1 MPQTRSQAQATISFPKRKLSRALNKAKNSSDAKLEPTNVQTVTCSPRVKALPLSPRKRLG 60
MPQTRSQAQATISFPKRKLSRALNKAKNSSDAKLEPTNVQTVTCSPRVKALPLSPRKRLG
Sbjct: 1 MPQTRSQAQATISFPKRKLSRALNKAKNSSDAKLEPTNVQTVTCSPRVKALPLSPRKRLG 60
Query: 61 DDNLCNTPHLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKI 120
DDNLCNTPHLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKI
Sbjct: 61 DDNLCNTPHLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKI 120
Query: 121 LSSVRKSQEITTNSEQRCPLKKESACVRLFKQEGTCYQQAKLVLNTAVPDRLPAREREMD 180
LSSVRKSQEITTNSEQRCPLKKESACVRLFKQEGTCYQQAKLVLNTAVPDRLPAREREMD
Sbjct: 121 LSSVRKSQEITTNSEQRCPLKKESACVRLFKQEGTCYQQAKLVLNTAVPDRLPAREREMD 180
Query: 181 VIRNFLREHICGKKAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRTAQ 240
VIRNFLREHICGKKAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRTAQ
Sbjct: 181 VIRNFLREHICGKKAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRTAQ 240
Query: 241 AVFPAIAQEICQEEVSRPAGKDMMRKLEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYTL 300
AVFPAIAQEICQEEVSRPAGKDMMRKLEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYTL
Sbjct: 241 AVFPAIAQEICQEEVSRPAGKDMMRKLEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYTL 300
Query: 301 FEWPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKPQLLNFPPYTRNQIVTILQDRLN 360
FEWPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKPQLLNFPPYTRNQIVTILQDRLN
Sbjct: 301 FEWPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKPQLLNFPPYTRNQIVTILQDRLN 360
Query: 361 QVSRDQVLDNAAVQFCARKVSAVSGDVRKALDVCRRAIEIVESDVKSQTILKPLSECKSP 420
QVSRDQVLDNAAVQFCARKVSAVSGDVRKALDVCRRAIEIVESDVKSQTILKPLSECKSP
Sbjct: 361 QVSRDQVLDNAAVQFCARKVSAVSGDVRKALDVCRRAIEIVESDVKSQTILKPLSECKSP 420
Query: 421 SEPLIPKRVGLIHISQVISEVDGNRMTLSQEGAQDSFPLQQKILVCSLMLLIRQLKIKEV 480
SEPLIPKRVGLIHISQVISEVDGNRMTLSQEGAQDSFPLQQKILVCSLMLLIRQLKIKEV
Sbjct: 421 SEPLIPKRVGLIHISQVISEVDGNRMTLSQEGAQDSFPLQQKILVCSLMLLIRQLKIKEV 480
Query: 481 TLGKLYEAYSKVCRKQQVAAVDQSECLSLSGLLEARGILGLKRNKETRLTKVFFKIEEKE 540
TLGKLYEAYSKVCRKQQVAAVDQSECLSLSGLLEARGILGLKRNKETRLTKVFFKIEEKE
Sbjct: 481 TLGKLYEAYSKVCRKQQVAAVDQSECLSLSGLLEARGILGLKRNKETRLTKVFFKIEEKE 540
Query: 541 IEHALKDKALIGNILATGLP 560
IEHALKDKALIGNILATGLP
Sbjct: 541 IEHALKDKALIGNILATGLP 560
>gi|31795544 origin recognition complex, subunit 1 [Homo sapiens]
Length = 861
Score = 170 bits (431), Expect = 3e-42
Identities = 129/471 (27%), Positives = 228/471 (48%), Gaps = 52/471 (11%)
Query: 99 DNQLTIKSPSKRELAKVHQNKILSSVRKSQEITTNSEQRCPLKKESACVR-------LFK 151
D + P R + + SS++ S T ++ + C L
Sbjct: 422 DEEEASTPPLPRRAPRTVSRNLRSSLKSSLHTLTKVPKKSLKPRTPRCAAPQIRSRSLAA 481
Query: 152 QE-GTCYQQAKLVLN-TAVPDRLPAREREMDVIRNFLREHICGKKAGSLYLSGAPGTGKT 209
QE + ++A+L L+ +AVP+ LP RE+E I NF+ + G +Y+SG PGTGKT
Sbjct: 482 QEPASVLEEARLRLHVSAVPESLPCREQEFQDIYNFVESKLLDHTGGCMYISGVPGTGKT 541
Query: 210 ACLSRILQDLKK-----ELKGFKTIMLNCMSLRTAQAVFPAIAQEICQEEVSRPAGKDMM 264
A + +++ L++ ++ F+ I +N M L V+ I Q++ ++ + ++
Sbjct: 542 ATVHEVIRCLQQAAQANDVPPFQYIEVNGMKLTEPHQVYVQILQKLTGQKATANHAAEL- 600
Query: 265 RKLEKHMTAEKGPM--IVLVLDEMDQLDSKGQDVLYTLFEWPWLSNSHLVLIGIANTLDL 322
L K P VL++DE+D L + QD++Y LF+WP + LV++ IANT+DL
Sbjct: 601 --LAKQFCTRGSPQETTVLLVDELDLLWTHKQDIMYNLFDWPTHKEARLVVLAIANTMDL 658
Query: 323 TDRIL-----PRLQAREKCKPQLLNFPPYTRNQIVTILQDRLNQVSRDQVLDNAAVQFCA 377
+RI+ RL C F PYT +Q+ IL+ RL + + ++ A+Q A
Sbjct: 659 PERIMMNRVSSRLGLTRMC------FQPYTYSQLQQILRSRLKHL---KAFEDDAIQLVA 709
Query: 378 RKVSAVSGDVRKALDVCRRAIEIVESDVKSQTILKPLSECKSPSEPLIPKRVGLIHISQV 437
RKV+A+SGD R+ LD+CRRA EI E + P GL+ I+
Sbjct: 710 RKVAALSGDARRCLDICRRATEICEFSQQK------------------PDSPGLVTIAHS 751
Query: 438 ISEVDGNRMTLSQEGAQDSFPLQQKILVCSLMLLIRQLKIKEVTLGKLYEAYSKVCRKQQ 497
+ VD + ++S L+Q L +++ R+ ++E T ++Y + +CR +
Sbjct: 752 MEAVDEMFSSSYITAIKNSSVLEQSFL-RAILAEFRRSGLEEATFQQIYSQHVALCRMEG 810
Query: 498 VAAVDQSECLSLSGLLEARGILGLKRNKETRLTKVFFKIEEKEIEHALKDK 548
+ SE +++ L + +L ++ ++ L +V + + ++ +ALKD+
Sbjct: 811 LPYPTMSETMAVCSHLGSCRLLLVEPSRNDLLLRVRLNVSQDDVLYALKDE 861
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 42.0 bits (97), Expect = 0.001
Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 27/171 (15%)
Query: 24 NKAKNSSDAKLEPTNVQTVTCSPRVKALPLSPRKRLGDDNLCN-----TPHLPPCSPPKQ 78
+KA +++ K E V S ++ A P + G N + HLPP PPK
Sbjct: 355 SKASENNENKKETDEVSNTKSSSQIPAQPSVAKVPYGKGPSFNQERGTSSHLPP--PPKL 412
Query: 79 GKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELA---------KVHQNKILSSVRKSQE 129
+++ PP + GR F PSK+++A + Q++I ++V ++++
Sbjct: 413 LAQQHPPPDRQAVPGRPGPF--------PSKQQVADEDEIWKQRRRQQSEISAAVERARK 464
Query: 130 ITTNSEQRCPLKKESACVRLFKQEGTCYQQAKLVLNTAVPDRLPAREREMD 180
E+R ++++AC K+ ++ ++ P+ + RERE +
Sbjct: 465 RREEEERRMEEQRKAACAEKLKR---LDEKLGILEKQPSPEEIREREREKE 512
>gi|194306571 replication factor C 5 isoform 2 [Homo sapiens]
Length = 319
Score = 37.4 bits (85), Expect = 0.037
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 44/219 (20%)
Query: 179 MDVIRNFLREHICGKKAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRT 238
+ I+ F+ E + L L G PGTGKT+ + + L K+ K F +++L
Sbjct: 20 LSTIQKFINED----RLPHLLLYGPPGTGKTSTILACAKQLYKD-KEFGSMVL------- 67
Query: 239 AQAVFPAIAQEICQEEVSRPAGKDMMR----KLEKHMTAEKGPMIVLVLDEMDQLDSKGQ 294
+ S G D++R T K +++LDE D + Q
Sbjct: 68 -------------ELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQ 114
Query: 295 DVLYTLFEWPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKPQLLNFPPYTRNQIVTI 354
+ L + E + N+ LI + +I+P LQ+R C F P T +V
Sbjct: 115 NALRRVIE-KFTENTRFCLI-----CNYLSKIIPALQSR--C--TRFRFGPLTPELMV-- 162
Query: 355 LQDRLNQVSRDQVLDNAAVQFCARKVSAVSGDVRKALDV 393
RL V ++ +D + A V+ SGD+R+AL++
Sbjct: 163 --PRLEHVVEEEKVDISEDGMKA-LVTLSSGDMRRALNI 198
>gi|194306567 replication factor C 5 isoform 2 [Homo sapiens]
Length = 319
Score = 37.4 bits (85), Expect = 0.037
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 44/219 (20%)
Query: 179 MDVIRNFLREHICGKKAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRT 238
+ I+ F+ E + L L G PGTGKT+ + + L K+ K F +++L
Sbjct: 20 LSTIQKFINED----RLPHLLLYGPPGTGKTSTILACAKQLYKD-KEFGSMVL------- 67
Query: 239 AQAVFPAIAQEICQEEVSRPAGKDMMR----KLEKHMTAEKGPMIVLVLDEMDQLDSKGQ 294
+ S G D++R T K +++LDE D + Q
Sbjct: 68 -------------ELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQ 114
Query: 295 DVLYTLFEWPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKPQLLNFPPYTRNQIVTI 354
+ L + E + N+ LI + +I+P LQ+R C F P T +V
Sbjct: 115 NALRRVIE-KFTENTRFCLI-----CNYLSKIIPALQSR--C--TRFRFGPLTPELMV-- 162
Query: 355 LQDRLNQVSRDQVLDNAAVQFCARKVSAVSGDVRKALDV 393
RL V ++ +D + A V+ SGD+R+AL++
Sbjct: 163 --PRLEHVVEEEKVDISEDGMKA-LVTLSSGDMRRALNI 198
>gi|6677723 replication factor C 5 isoform 1 [Homo sapiens]
Length = 340
Score = 37.4 bits (85), Expect = 0.037
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 44/219 (20%)
Query: 179 MDVIRNFLREHICGKKAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRT 238
+ I+ F+ E + L L G PGTGKT+ + + L K+ K F +++L
Sbjct: 41 LSTIQKFINED----RLPHLLLYGPPGTGKTSTILACAKQLYKD-KEFGSMVL------- 88
Query: 239 AQAVFPAIAQEICQEEVSRPAGKDMMR----KLEKHMTAEKGPMIVLVLDEMDQLDSKGQ 294
+ S G D++R T K +++LDE D + Q
Sbjct: 89 -------------ELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQ 135
Query: 295 DVLYTLFEWPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKPQLLNFPPYTRNQIVTI 354
+ L + E + N+ LI + +I+P LQ+R C F P T +V
Sbjct: 136 NALRRVIE-KFTENTRFCLI-----CNYLSKIIPALQSR--C--TRFRFGPLTPELMV-- 183
Query: 355 LQDRLNQVSRDQVLDNAAVQFCARKVSAVSGDVRKALDV 393
RL V ++ +D + A V+ SGD+R+AL++
Sbjct: 184 --PRLEHVVEEEKVDISEDGMKA-LVTLSSGDMRRALNI 219
>gi|31563534 replication factor C 2 isoform 1 [Homo sapiens]
Length = 354
Score = 37.4 bits (85), Expect = 0.037
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 56/208 (26%)
Query: 197 SLYLSGAPGTGKTA---CLSRILQDLKKELKGFKTIMLNCMSLRTAQAVFPAIAQEICQE 253
++ ++G PGTGKT CL+R L + PA+ + +
Sbjct: 71 NIIIAGPPGTGKTTSILCLARAL-------------------------LGPALKDAMLEL 105
Query: 254 EVSRPAGKDMMRK-----LEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYTLFEWPWLSN 308
S G D++R ++ +T KG +++LDE D + Q L E
Sbjct: 106 NASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTME------ 159
Query: 309 SHLVLIGIANTLDLTDRILPRLQAREKCKPQLLNFPPYTRNQIVTILQDRLNQVSRDQV- 367
+ A + +D+I+ +Q+R C +L + T QI+T L +N + +++V
Sbjct: 160 IYSKTTRFALACNASDKIIEPIQSR--C--AVLRYTKLTDAQILTRL---MNVIEKERVP 212
Query: 368 -LDNA--AVQFCARKVSAVSGDVRKALD 392
D+ A+ F A+ GD+R+AL+
Sbjct: 213 YTDDGLEAIIFTAQ------GDMRQALN 234
>gi|32454748 origin recognition complex subunit 4 [Homo sapiens]
Length = 436
Score = 36.6 bits (83), Expect = 0.063
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 194 KAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRTAQAVFPAIAQEICQE 253
++ S+ + G G+GKT ++ L KEL + + N + + + I +I +
Sbjct: 59 ESNSVLIIGPRGSGKTMLINHAL----KELMEIEEVSENVLQVHLNGLL--QINDKIALK 112
Query: 254 EVSRPAGKD-----------------MMRKLEKHMTAEKGPMIVLVLDEMDQL-DSKGQD 295
E++R + ++ L+K P ++ +LDE D K Q
Sbjct: 113 EITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCP-VIFILDEFDLFAHHKNQT 171
Query: 296 VLYTLFEWPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKP-QLLN---FPPYTR 348
+LY LF+ + + + +IG+ LD+ + + R+++R + L+N FP Y +
Sbjct: 172 LLYNLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVK 228
>gi|32454746 origin recognition complex subunit 4 [Homo sapiens]
Length = 436
Score = 36.6 bits (83), Expect = 0.063
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 194 KAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRTAQAVFPAIAQEICQE 253
++ S+ + G G+GKT ++ L KEL + + N + + + I +I +
Sbjct: 59 ESNSVLIIGPRGSGKTMLINHAL----KELMEIEEVSENVLQVHLNGLL--QINDKIALK 112
Query: 254 EVSRPAGKD-----------------MMRKLEKHMTAEKGPMIVLVLDEMDQL-DSKGQD 295
E++R + ++ L+K P ++ +LDE D K Q
Sbjct: 113 EITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCP-VIFILDEFDLFAHHKNQT 171
Query: 296 VLYTLFEWPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKP-QLLN---FPPYTR 348
+LY LF+ + + + +IG+ LD+ + + R+++R + L+N FP Y +
Sbjct: 172 LLYNLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVK 228
>gi|32454750 origin recognition complex subunit 4 [Homo sapiens]
Length = 436
Score = 36.6 bits (83), Expect = 0.063
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 194 KAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRTAQAVFPAIAQEICQE 253
++ S+ + G G+GKT ++ L KEL + + N + + + I +I +
Sbjct: 59 ESNSVLIIGPRGSGKTMLINHAL----KELMEIEEVSENVLQVHLNGLL--QINDKIALK 112
Query: 254 EVSRPAGKD-----------------MMRKLEKHMTAEKGPMIVLVLDEMDQL-DSKGQD 295
E++R + ++ L+K P ++ +LDE D K Q
Sbjct: 113 EITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCP-VIFILDEFDLFAHHKNQT 171
Query: 296 VLYTLFEWPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKP-QLLN---FPPYTR 348
+LY LF+ + + + +IG+ LD+ + + R+++R + L+N FP Y +
Sbjct: 172 LLYNLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVK 228
>gi|169234742 NACHT and WD repeat domain containing 1 [Homo sapiens]
Length = 1429
Score = 35.8 bits (81), Expect = 0.11
Identities = 67/303 (22%), Positives = 118/303 (38%), Gaps = 48/303 (15%)
Query: 189 HICGKKAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTI----MLNCMSLRT-AQAVF 243
H K+ L L G PG GKTA + ++ + + + L G KT+ +L + + A+ +
Sbjct: 193 HDDSKQHTPLVLFGPPGIGKTALMCKLAEQMPR-LLGHKTVTVLRLLGTSQMSSDARGLL 251
Query: 244 PAIAQEIC----------QEEVSRPAGKDMMRKLEKHMTAEKGPMIVLVLDEMDQLDSKG 293
+I ++C Q + L ++ +VL+LD MD LDS
Sbjct: 252 KSICFQVCLAYGLPLPPAQVLDAHTRVVQFFHTLLHTVSCRNFESLVLLLDAMDDLDS-- 309
Query: 294 QDVLYTLFEWPWL-----SNSHLVL---IGIANTLDLTDRILPRLQAREKCKPQLLNFPP 345
+ PWL HL+L G LD R+L +A + KP N
Sbjct: 310 ---VRHARRVPWLPLNCPPRVHLILSACSGALGVLDTLQRVLLDPEAYWEVKPLSGNQGQ 366
Query: 346 YTRNQIVTILQDRLNQVSRDQVLDNAAVQFCARKVSAVSGDVRKALDVCRRAIEIVESDV 405
++ + L+ V D + A++ C G +R A + R+
Sbjct: 367 QMIQLLLAAARRTLSPVHTDLLW--ASLPECGN-----PGRLRLAFEEARK--------W 411
Query: 406 KSQTILKPLSECKSPSEPLIPKRV----GLIHISQVISEVDGNRMTLSQEGAQDSFPLQQ 461
S T+ PL+ + + R+ G + ++ V+ + +R LS+ +D L
Sbjct: 412 ASFTVPVPLATTAEEATHQLCTRLEQTHGQLLVAHVLGYIVSSRHGLSEAELKDVLSLDD 471
Query: 462 KIL 464
++L
Sbjct: 472 EVL 474
>gi|5453593 adenylyl cyclase-associated protein 2 [Homo sapiens]
Length = 477
Score = 34.7 bits (78), Expect = 0.24
Identities = 31/97 (31%), Positives = 39/97 (40%), Gaps = 20/97 (20%)
Query: 68 PHLPPCSPP----KQGKKENGPPHSHTL-----------KGRRLVFDNQLTIKSPSKREL 112
P LPP PP +GKKE P L KG R V D+Q T K+PS R
Sbjct: 236 PPLPPPGPPPLFENEGKKEESSPSRSALFAQLNQGEAITKGLRHVTDDQKTYKNPSLRA- 294
Query: 113 AKVHQNKILSSVRKSQEITTNSEQRCPLKKESACVRL 149
Q S KS + S + P +K + + L
Sbjct: 295 ----QGGQTQSPTKSHTPSPTSPKSYPSQKHAPVLEL 327
>gi|32528306 replication factor C large subunit [Homo sapiens]
Length = 1147
Score = 32.3 bits (72), Expect = 1.2
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 192 GKKAGSLY----LSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRTAQAVFPAIA 247
GK GS + LSG PG GKT S + Q+L G+ + LN R+ ++ +A
Sbjct: 636 GKDDGSSFKAALLSGPPGVGKTTTASLVCQEL-----GYSYVELNASDTRSKSSLKAIVA 690
Query: 248 QEI 250
+ +
Sbjct: 691 ESL 693
>gi|4758646 kinesin family member 3B [Homo sapiens]
Length = 747
Score = 32.3 bits (72), Expect = 1.2
Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 3/119 (2%)
Query: 153 EGTCYQQAKLVLNTAVPDRLPAREREMDVIRNFLREHICGKKAGSLYLSGAPGTGKTACL 212
+GT ++ K AV D + D L + + G+++ G GTGKT +
Sbjct: 47 KGTAHEMPKTFTFDAVYDWNAKQFELYDETFRPLVDSVLQGFNGTIFAYGQTGTGKTYTM 106
Query: 213 SRILQDLKKE---LKGFKTIMLNCMSLRTAQAVFPAIAQEICQEEVSRPAGKDMMRKLE 268
I D +K F I + + Q + A EI QEE+ KD ++LE
Sbjct: 107 EGIRGDPEKRGVIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKDQTKRLE 165
>gi|14043024 BCL2-associated athanogene 3 [Homo sapiens]
Length = 575
Score = 32.3 bits (72), Expect = 1.2
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 31 DAKLEPTNVQTVTCSPRVKALPLSPRKRLGDDNLCNTPHLPPCSPPKQGKKENGPPHSHT 90
+ K+ P V SP A+P SP+ ++ + +PPK G+ E P H
Sbjct: 363 EVKVPPAPVPCPPPSPGPSAVPSSPKSVATEERAAPSTAPAEATPPKPGEAEAPPKHPGV 422
Query: 91 LK 92
LK
Sbjct: 423 LK 424
>gi|31881687 replication factor C 4 [Homo sapiens]
Length = 363
Score = 32.3 bits (72), Expect = 1.2
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 186 LREHICGKKAGSLYLSGAPGTGKTACLSRILQDL-KKELKGFKTIMLNCMSLRTAQAVFP 244
L++ + G +L G PGTGKT+ + ++L EL + + LN R Q V
Sbjct: 62 LKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVRE 121
Query: 245 AIAQEICQEEV--SRPAGKDMMRKLEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYTLFE 302
+ + Q V SR GK P +++LDE D + S Q L E
Sbjct: 122 KV-KNFAQLTVSGSRSDGKPC------------PPFKIVILDEADSMTSAAQAALRRTME 168
Query: 303 WPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKPQLLNFPPYTRNQIVTILQDRLNQV 362
+ ++ + RI+ L +R C F P + I Q RL +
Sbjct: 169 KESKTTRFCLI------CNYVSRIIEPLTSR--CSK--FRFKPLSDK----IQQQRLLDI 214
Query: 363 SRDQVLDNAAVQFCARKVSAVSGDVRKALDVCRRAIEI 400
++ + + + + A V GD+RKA+ + A +
Sbjct: 215 AKKENV-KISDEGIAYLVKVSEGDLRKAITFLQSATRL 251
>gi|4506491 replication factor C 4 [Homo sapiens]
Length = 363
Score = 32.3 bits (72), Expect = 1.2
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 186 LREHICGKKAGSLYLSGAPGTGKTACLSRILQDL-KKELKGFKTIMLNCMSLRTAQAVFP 244
L++ + G +L G PGTGKT+ + ++L EL + + LN R Q V
Sbjct: 62 LKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVRE 121
Query: 245 AIAQEICQEEV--SRPAGKDMMRKLEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYTLFE 302
+ + Q V SR GK P +++LDE D + S Q L E
Sbjct: 122 KV-KNFAQLTVSGSRSDGKPC------------PPFKIVILDEADSMTSAAQAALRRTME 168
Query: 303 WPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKPQLLNFPPYTRNQIVTILQDRLNQV 362
+ ++ + RI+ L +R C F P + I Q RL +
Sbjct: 169 KESKTTRFCLI------CNYVSRIIEPLTSR--CSK--FRFKPLSDK----IQQQRLLDI 214
Query: 363 SRDQVLDNAAVQFCARKVSAVSGDVRKALDVCRRAIEI 400
++ + + + + A V GD+RKA+ + A +
Sbjct: 215 AKKENV-KISDEGIAYLVKVSEGDLRKAITFLQSATRL 251
>gi|33667040 NLR family, pyrin domain containing 8 [Homo sapiens]
Length = 1048
Score = 32.0 bits (71), Expect = 1.5
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 22/159 (13%)
Query: 192 GKKAGSLYLSGAPGTGKTACLSRILQDLKKEL----KGFKTIMLNCMSL-RTAQAVFPAI 246
G++ ++ + GAPG GKT +++ + + K + +C + +T F +
Sbjct: 200 GRQPKTVAIQGAPGIGKTILAKKVMFEWARNKFYAHKRWCAFYFHCQEVNQTTDQSFSEL 259
Query: 247 AQEICQEEVSRPAGKDMMRKLEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYTLFEWPW- 305
++ P +D++ K+ K ++L+LD ++L S D L L E W
Sbjct: 260 IEQ------KWPGSQDLVSKI-----MSKPDQLLLLLDGFEELTSTLIDRLEDLSE-DWR 307
Query: 306 --LSNSHLVLIGIANTL--DLTDRILPRLQAREKCKPQL 340
L S L+ ++ T+ + T I+ R + + CKP L
Sbjct: 308 QKLPGSVLLSSLLSKTMLPEATLLIMIRFTSWQTCKPLL 346
>gi|75677353 AAA-ATPase TOB3 [Homo sapiens]
Length = 648
Score = 32.0 bits (71), Expect = 1.5
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 68 PHLPPCSPPKQGKKENGPPHSHTLKGRRLVFD-NQLTIKSPSKRELAKVHQNKILSSVRK 126
P LPP P +G + G K + FD L + + REL K ++ +
Sbjct: 20 PPLPPAQPGAEGGGDRGLGDRPAPKDKWSNFDPTGLERAAKAARELEHSRYAKEALNLAQ 79
Query: 127 SQEITTNSEQRCPLKKESACVRLFKQE 153
QE T EQ+ LK+ A V K E
Sbjct: 80 MQEQTLQLEQQSKLKEYEAAVEQLKSE 106
>gi|148664197 coiled-coil domain containing 40 [Homo sapiens]
Length = 1142
Score = 32.0 bits (71), Expect = 1.5
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 27/182 (14%)
Query: 380 VSAVSGDVRKA----------LDVCRRAIEIVESDVKSQTILKPLSECK-SPSEPLIPKR 428
+S ++GD+ + LD ++ + ++ DVK L S+ + S LI ++
Sbjct: 667 LSKINGDIAQTTLDITHTSSRLDAHQKTLVELDQDVKKVNELITNSQSEISRRTILIERK 726
Query: 429 VGLIHISQVISEVDGNRMTLSQEGAQDSFPLQQKILVCSLMLLIRQLKIKEVTLGKLYEA 488
GLI+ E RM +S+ G ++ PL+ +I R K+ + GK +A
Sbjct: 727 QGLINFLNKQLE----RM-VSELGGEEVGPLELEIK--------RLSKLIDEHDGKAVQA 773
Query: 489 YSKVCRKQQ-VAAVDQSECLSLSGLLEARGILGLKRNKETRLTKVFF--KIEEKEIEHAL 545
R QQ + V Q + L+ L ++ L + K+ R+ K E+KEIEH +
Sbjct: 774 QVTWLRLQQEMVKVTQEQEEQLASLDASKKELHIMEQKKLRVESKIEQEKKEQKEIEHHM 833
Query: 546 KD 547
KD
Sbjct: 834 KD 835
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 31.6 bits (70), Expect = 2.0
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 36/170 (21%)
Query: 2 PQTRSQAQATISFPKRKLSRALNKAKNSSDAKLEP---TNVQTVTCSPRVKALPLSPRKR 58
PQ+ Q Q+ P R S + + + S+ ++L P + VQT T P +P+ P
Sbjct: 2331 PQSNVQGQS----PVRVQSPSQTRIRPSTPSQLSPGQQSQVQTTTSQP----IPIQPHTS 2382
Query: 59 LGDDNLCNTPHLPPCSPPKQGKKENGPP---HSHTLKGRRLVFDNQLTIKSPSKREL-AK 114
L P QG+ ++ P + TL + + NQ+T+ SPS+ +L +
Sbjct: 2383 L--------------QIPSQGQPQSQPQVQSSTQTLSSGQTL--NQVTVSSPSRPQLQIQ 2426
Query: 115 VHQNKILSSVRKSQEITTNSEQRCPLKKESACVRLFKQEGTCYQQAKLVL 164
Q ++++ + Q++ S+ + ++ Q+ QQ KL L
Sbjct: 2427 QPQPQVIAVPQLQQQVQVLSQ-----IQSQVVAQIQAQQSGVPQQIKLQL 2471
>gi|167621456 kinase suppressor of ras 2 [Homo sapiens]
Length = 921
Score = 31.6 bits (70), Expect = 2.0
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 26/126 (20%)
Query: 49 KALPLSPRKRLGDDNLCNTPHL-----PPCSPPKQGKKENGPPHSHTLKGRRLV------ 97
++LP SPR+R TP++ PP +PP + K + PP + R+L+
Sbjct: 217 RSLPPSPRQRHAVRTPPRTPNIVTTVTPPGTPPMRKKNKLKPPGTPPPSSRKLIHLIPGF 276
Query: 98 --------FDNQL-----TIKSPSKRELAKVHQNKILSSVRKSQEITTNSEQRCPLKKES 144
+ QL +P ++ +K KI SSV + I S+QR PL E
Sbjct: 277 TALHRSKSHEFQLGHRVDEAHTPKAKKKSKPLNLKIHSSVGSCENIP--SQQRSPLLSER 334
Query: 145 ACVRLF 150
+ F
Sbjct: 335 SLRSFF 340
>gi|19718796 RAD17 homolog isoform 1 [Homo sapiens]
Length = 670
Score = 31.2 bits (69), Expect = 2.6
Identities = 64/301 (21%), Positives = 122/301 (40%), Gaps = 37/301 (12%)
Query: 122 SSVRKSQEITTNSEQRCPLKKESACVRLFKQEGTCYQQAKLVLNTAVPDR--------LP 173
SS R+ +T R P +K L + G + L N D+ L
Sbjct: 34 SSHRRKNGPSTLESSRFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELA 93
Query: 174 AREREMDVIRNFLREHICG---KKAGSLYL-SGAPGTGKTACLS--------RILQDLKK 221
+++++ + +L+ + K+ GS+ L +G PG GKT L ++ + +
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 153
Query: 222 ELKGF-KTIMLNCMSLRTAQAVFPAIAQ-EICQEEVSRPAGKDMMRKLEKHMTAEKGPMI 279
L F K + ++ +FP +Q + +E + R + ++ L + +K I
Sbjct: 154 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDK--KI 211
Query: 280 VLVLDEMDQLDSKGQDVLYTLFEWPWLSNSHLVLIGIANTL--DLTDRILPRLQAREKCK 337
+LV D +Q + L ++ + L+ I I+++L D R+L + +E+C
Sbjct: 212 ILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFI-ISDSLSGDNNQRLLFPKEIQEECS 270
Query: 338 PQLLNFPPYTRNQIVTILQDRLNQVSRDQVLDNAAVQFCARKVS------AVSGDVRKAL 391
++F P TI+ LN++ + N K S SGD+R A+
Sbjct: 271 ISNISFNPVA----PTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAI 326
Query: 392 D 392
+
Sbjct: 327 N 327
>gi|19718794 RAD17 homolog isoform 1 [Homo sapiens]
Length = 670
Score = 31.2 bits (69), Expect = 2.6
Identities = 64/301 (21%), Positives = 122/301 (40%), Gaps = 37/301 (12%)
Query: 122 SSVRKSQEITTNSEQRCPLKKESACVRLFKQEGTCYQQAKLVLNTAVPDR--------LP 173
SS R+ +T R P +K L + G + L N D+ L
Sbjct: 34 SSHRRKNGPSTLESSRFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELA 93
Query: 174 AREREMDVIRNFLREHICG---KKAGSLYL-SGAPGTGKTACLS--------RILQDLKK 221
+++++ + +L+ + K+ GS+ L +G PG GKT L ++ + +
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 153
Query: 222 ELKGF-KTIMLNCMSLRTAQAVFPAIAQ-EICQEEVSRPAGKDMMRKLEKHMTAEKGPMI 279
L F K + ++ +FP +Q + +E + R + ++ L + +K I
Sbjct: 154 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDK--KI 211
Query: 280 VLVLDEMDQLDSKGQDVLYTLFEWPWLSNSHLVLIGIANTL--DLTDRILPRLQAREKCK 337
+LV D +Q + L ++ + L+ I I+++L D R+L + +E+C
Sbjct: 212 ILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFI-ISDSLSGDNNQRLLFPKEIQEECS 270
Query: 338 PQLLNFPPYTRNQIVTILQDRLNQVSRDQVLDNAAVQFCARKVS------AVSGDVRKAL 391
++F P TI+ LN++ + N K S SGD+R A+
Sbjct: 271 ISNISFNPVA----PTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAI 326
Query: 392 D 392
+
Sbjct: 327 N 327
>gi|19718792 RAD17 homolog isoform 1 [Homo sapiens]
Length = 670
Score = 31.2 bits (69), Expect = 2.6
Identities = 64/301 (21%), Positives = 122/301 (40%), Gaps = 37/301 (12%)
Query: 122 SSVRKSQEITTNSEQRCPLKKESACVRLFKQEGTCYQQAKLVLNTAVPDR--------LP 173
SS R+ +T R P +K L + G + L N D+ L
Sbjct: 34 SSHRRKNGPSTLESSRFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELA 93
Query: 174 AREREMDVIRNFLREHICG---KKAGSLYL-SGAPGTGKTACLS--------RILQDLKK 221
+++++ + +L+ + K+ GS+ L +G PG GKT L ++ + +
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 153
Query: 222 ELKGF-KTIMLNCMSLRTAQAVFPAIAQ-EICQEEVSRPAGKDMMRKLEKHMTAEKGPMI 279
L F K + ++ +FP +Q + +E + R + ++ L + +K I
Sbjct: 154 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDK--KI 211
Query: 280 VLVLDEMDQLDSKGQDVLYTLFEWPWLSNSHLVLIGIANTL--DLTDRILPRLQAREKCK 337
+LV D +Q + L ++ + L+ I I+++L D R+L + +E+C
Sbjct: 212 ILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFI-ISDSLSGDNNQRLLFPKEIQEECS 270
Query: 338 PQLLNFPPYTRNQIVTILQDRLNQVSRDQVLDNAAVQFCARKVS------AVSGDVRKAL 391
++F P TI+ LN++ + N K S SGD+R A+
Sbjct: 271 ISNISFNPVA----PTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAI 326
Query: 392 D 392
+
Sbjct: 327 N 327
>gi|19718784 RAD17 homolog isoform 1 [Homo sapiens]
Length = 670
Score = 31.2 bits (69), Expect = 2.6
Identities = 64/301 (21%), Positives = 122/301 (40%), Gaps = 37/301 (12%)
Query: 122 SSVRKSQEITTNSEQRCPLKKESACVRLFKQEGTCYQQAKLVLNTAVPDR--------LP 173
SS R+ +T R P +K L + G + L N D+ L
Sbjct: 34 SSHRRKNGPSTLESSRFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELA 93
Query: 174 AREREMDVIRNFLREHICG---KKAGSLYL-SGAPGTGKTACLS--------RILQDLKK 221
+++++ + +L+ + K+ GS+ L +G PG GKT L ++ + +
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 153
Query: 222 ELKGF-KTIMLNCMSLRTAQAVFPAIAQ-EICQEEVSRPAGKDMMRKLEKHMTAEKGPMI 279
L F K + ++ +FP +Q + +E + R + ++ L + +K I
Sbjct: 154 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDK--KI 211
Query: 280 VLVLDEMDQLDSKGQDVLYTLFEWPWLSNSHLVLIGIANTL--DLTDRILPRLQAREKCK 337
+LV D +Q + L ++ + L+ I I+++L D R+L + +E+C
Sbjct: 212 ILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFI-ISDSLSGDNNQRLLFPKEIQEECS 270
Query: 338 PQLLNFPPYTRNQIVTILQDRLNQVSRDQVLDNAAVQFCARKVS------AVSGDVRKAL 391
++F P TI+ LN++ + N K S SGD+R A+
Sbjct: 271 ISNISFNPVA----PTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAI 326
Query: 392 D 392
+
Sbjct: 327 N 327
>gi|4506383 RAD17 homolog isoform 1 [Homo sapiens]
Length = 670
Score = 31.2 bits (69), Expect = 2.6
Identities = 64/301 (21%), Positives = 122/301 (40%), Gaps = 37/301 (12%)
Query: 122 SSVRKSQEITTNSEQRCPLKKESACVRLFKQEGTCYQQAKLVLNTAVPDR--------LP 173
SS R+ +T R P +K L + G + L N D+ L
Sbjct: 34 SSHRRKNGPSTLESSRFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELA 93
Query: 174 AREREMDVIRNFLREHICG---KKAGSLYL-SGAPGTGKTACLS--------RILQDLKK 221
+++++ + +L+ + K+ GS+ L +G PG GKT L ++ + +
Sbjct: 94 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 153
Query: 222 ELKGF-KTIMLNCMSLRTAQAVFPAIAQ-EICQEEVSRPAGKDMMRKLEKHMTAEKGPMI 279
L F K + ++ +FP +Q + +E + R + ++ L + +K I
Sbjct: 154 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDK--KI 211
Query: 280 VLVLDEMDQLDSKGQDVLYTLFEWPWLSNSHLVLIGIANTL--DLTDRILPRLQAREKCK 337
+LV D +Q + L ++ + L+ I I+++L D R+L + +E+C
Sbjct: 212 ILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFI-ISDSLSGDNNQRLLFPKEIQEECS 270
Query: 338 PQLLNFPPYTRNQIVTILQDRLNQVSRDQVLDNAAVQFCARKVS------AVSGDVRKAL 391
++F P TI+ LN++ + N K S SGD+R A+
Sbjct: 271 ISNISFNPVA----PTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAI 326
Query: 392 D 392
+
Sbjct: 327 N 327
>gi|19718786 RAD17 homolog isoform 2 [Homo sapiens]
Length = 681
Score = 31.2 bits (69), Expect = 2.6
Identities = 64/301 (21%), Positives = 122/301 (40%), Gaps = 37/301 (12%)
Query: 122 SSVRKSQEITTNSEQRCPLKKESACVRLFKQEGTCYQQAKLVLNTAVPDR--------LP 173
SS R+ +T R P +K L + G + L N D+ L
Sbjct: 45 SSHRRKNGPSTLESSRFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELA 104
Query: 174 AREREMDVIRNFLREHICG---KKAGSLYL-SGAPGTGKTACLS--------RILQDLKK 221
+++++ + +L+ + K+ GS+ L +G PG GKT L ++ + +
Sbjct: 105 VHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINP 164
Query: 222 ELKGF-KTIMLNCMSLRTAQAVFPAIAQ-EICQEEVSRPAGKDMMRKLEKHMTAEKGPMI 279
L F K + ++ +FP +Q + +E + R + ++ L + +K I
Sbjct: 165 VLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDK--KI 222
Query: 280 VLVLDEMDQLDSKGQDVLYTLFEWPWLSNSHLVLIGIANTL--DLTDRILPRLQAREKCK 337
+LV D +Q + L ++ + L+ I I+++L D R+L + +E+C
Sbjct: 223 ILVEDLPNQFYRDSHTLHEVLRKYVRIGRCPLIFI-ISDSLSGDNNQRLLFPKEIQEECS 281
Query: 338 PQLLNFPPYTRNQIVTILQDRLNQVSRDQVLDNAAVQFCARKVS------AVSGDVRKAL 391
++F P TI+ LN++ + N K S SGD+R A+
Sbjct: 282 ISNISFNPVA----PTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAI 337
Query: 392 D 392
+
Sbjct: 338 N 338
>gi|157057547 Fc receptor-like 6 [Homo sapiens]
Length = 434
Score = 31.2 bits (69), Expect = 2.6
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 23/150 (15%)
Query: 285 EMDQLDSKGQDVLYT-LFEW--PWLSNSHLVLIGIANTL-----------DLTDRILPRL 330
E +L KG VL+T W PWL S L L+ IA L L +I P
Sbjct: 288 EPKKLSLKGSQVLFTPASNWLVPWLPASLLGLMVIAAALLVYVRSWRKAGPLPSQIPPTA 347
Query: 331 QAREKCKPQLLNFPPYTRNQIVTILQDRLNQVSRDQVLDNAAVQFCARKVSAVSGDVRKA 390
E+C P N + + + ++ +++ S+ +A + S + +VR
Sbjct: 348 PGGEQC-PLYANVH-HQKGKDEGVVYSVVHRTSKRSEARSAEFTVGRKDSSIICAEVR-- 403
Query: 391 LDVCRRAIEIVESDV--KSQTILKPLSECK 418
C + E+ ++V +S+T+ +PLS+C+
Sbjct: 404 ---CLQPSEVSSTEVNMRSRTLQEPLSDCE 430
>gi|223555989 hypothetical protein LOC51101 [Homo sapiens]
Length = 325
Score = 30.8 bits (68), Expect = 3.4
Identities = 31/109 (28%), Positives = 42/109 (38%), Gaps = 9/109 (8%)
Query: 8 AQATISFPKRKLSRALNKAKNSSDAKLEPTNVQTVTCSPRVKALPLSPRKRLGDDNLCNT 67
A I+F K + +R NK K S+D K +PT+ V P +K G L
Sbjct: 134 ADRHINFCKEQAARISNKGKFSTDTKGKPTSRTQVYKPPALKKSNSPGTASSGSSRL--- 190
Query: 68 PHLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVH 116
P GK G P S + N+L SPS + +A H
Sbjct: 191 -----PQPSGAGKTVVGVP-SGKVSSSSSSLGNKLQTLSPSHKGIAAPH 233
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,954,585
Number of Sequences: 37866
Number of extensions: 940642
Number of successful extensions: 3126
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 3112
Number of HSP's gapped (non-prelim): 51
length of query: 560
length of database: 18,247,518
effective HSP length: 107
effective length of query: 453
effective length of database: 14,195,856
effective search space: 6430722768
effective search space used: 6430722768
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.