GPM6A 27913

Name: GPM6A	Sequence: fasta or formatted (278aa)		NCBI GI: 42476108
Description: glycoprotein M6A isoform 2		Referenced in: Oligodendrocytes and Myelin
Other entries for this name: alt mRNA [278aa] glycoprotein M6A isoform 1 alt prot [267aa] glycoprotein M6A isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 25 3 C cysteine 4.7 13 2 D aspartate 3.2 9 1 E glutamate 6.8 19 2 F phenylalanine 6.5 18 2 G glycine 7.6 21 2 H histidine 1.8 5 1 I isoleucine 7.6 21 1 K lysine 4.3 12 2 L leucine 10.4 29 2 M methionine 4.7 13 1 N asparagine 3.2 9 1 P proline 0.7 2 1 Q glutamine 2.2 6 1 R arginine 2.9 8 1 S serine 3.6 10 1 T threonine 8.3 23 2 V valine 6.1 17 1 W tryptophan 1.4 4 1 Y tyrosine 5.0 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 glycoprotein M6A isoform 2 GPM6A 1.000 glycoprotein M6A isoform 1 GPM6A 0.956 glycoprotein M6A isoform 3 GPM6B 0.532 glycoprotein M6B isoform 1 GPM6B 0.442 glycoprotein M6B isoform 3 GPM6B 0.418 glycoprotein M6B isoform 4 GPM6B 0.418 glycoprotein M6B isoform 2 PLP1 0.352 proteolipid protein 1 isoform 2 PLP1 0.323 proteolipid protein 1 isoform 1 PLP1 0.323 proteolipid protein 1 isoform 1 OR6X1 0.015 olfactory receptor, family 6, subfamily X, member 1 ... RGR 0.011 retinal G-protein coupled receptor isoform 2 RGR 0.011 retinal G-protein coupled receptor isoform 3 OR2C3 0.011 olfactory receptor, family 2, subfamily C, member 3... PLXNA3 0.009 plexin A3 RGR 0.007 retinal G-protein coupled receptor isoform 1 CD3D 0.007 CD3 antigen, delta subunit isoform A precursor MPZL2 0.007 myelin protein zero-like 2 precursor MPZL2 0.007 myelin protein zero-like 2 precursor NOX1 0.006 NADPH oxidase 1 isoform long NOX1 0.006 NADPH oxidase 1 isoform long variant Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.