Guide to the Human Genome
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Name: B3GALT4 Sequence: fasta or formatted (378aa) NCBI GI: 4502341
Description:

UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 4

Referenced in:

Sphingomyelin, Ceramides, and Glycolipids
Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         34           2
 C cysteine            2.1          8           2
 D aspartate           2.6         10           3
 E glutamate           5.8         22           2
 F phenylalanine       2.6         10           1
 G glycine             9.3         35           2
 H histidine           2.1          8           1
 I isoleucine          2.1          8           1
 K lysine              2.1          8           1
 L leucine            15.6         59           3
 M methionine          0.8          3           1
 N asparagine          2.4          9           1
 P proline             7.9         30           2
 Q glutamine           5.0         19           1
 R arginine            7.4         28           2
 S serine              7.1         27           1
 T threonine           3.7         14           1
 V valine              6.6         25           1
 W tryptophan          3.4         13           1
 Y tyrosine            2.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 4 [... 
LOC100289720          0.170   PREDICTED: hypothetical protein XP_002347139 
LOC100288842          0.170   PREDICTED: hypothetical protein XP_002342992 
B3GALT5               0.156   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.156   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.156   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.156   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.156   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 [...
B3GALT1               0.153   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GNT6                0.146   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra...
B3GNT5                0.146   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT4                0.134   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT9                0.133   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra...
B3GALT2               0.123   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 2 [...
B3GNT8                0.121   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT3                0.119   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GALNT1              0.113   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.113   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.113   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.113   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.113   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 [...
B3GNT7                0.110   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT2                0.099   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltrans...
B3GALT6               0.076   beta-1,3-galactosyltransferase 6 
B3GALNT2              0.036   beta-1,3-N-acetylgalactosaminyltransferase 2 
FMN1                  0.011   formin 1 
NCCRP1                0.011   non-specific cytotoxic cell receptor protein 1 homol...
RCOR2                 0.009   REST corepressor 2 
SMARCA2               0.007   SWI/SNF-related matrix-associated actin-dependent re...
SMARCA2               0.007   SWI/SNF-related matrix-associated actin-dependent re...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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