Guide to the Human Genome
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Name: B3GALNT2 Sequence: fasta or formatted (500aa) NCBI GI: 22749021
Description:

beta-1,3-N-acetylgalactosaminyltransferase 2

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         29           2
 C cysteine            2.6         13           1
 D aspartate           5.4         27           3
 E glutamate           6.8         34           2
 F phenylalanine       3.8         19           1
 G glycine             6.6         33           3
 H histidine           2.6         13           1
 I isoleucine          4.8         24           2
 K lysine              3.8         19           1
 L leucine            11.4         57           3
 M methionine          1.0          5           1
 N asparagine          4.6         23           2
 P proline             5.4         27           3
 Q glutamine           3.8         19           1
 R arginine            5.6         28           1
 S serine              6.6         33           2
 T threonine           4.2         21           2
 V valine              8.6         43           3
 W tryptophan          3.2         16           2
 Y tyrosine            3.4         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   beta-1,3-N-acetylgalactosaminyltransferase 2 
B3GALT6               0.059   beta-1,3-galactosyltransferase 6 
B3GALT2               0.049   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 2 [...
B3GALT1               0.048   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.040   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.040   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.040   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.040   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.040   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 [...
B3GALT5               0.033   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.033   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.033   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.033   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.033   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 [...
B3GALT4               0.027   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 4 [...
B3GNT5                0.025   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT8                0.024   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT4                0.023   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT9                0.022   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra...
B3GNT7                0.020   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT2                0.019   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltrans...
B3GNT6                0.016   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra...
LOC100289720          0.015   PREDICTED: hypothetical protein XP_002347139 
LOC100288842          0.015   PREDICTED: hypothetical protein XP_002342992 
B3GNT3                0.011   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
PCDHGA6               0.005   protocadherin gamma subfamily A, 6 isoform 1 precurs...
PCDHGA6               0.005   protocadherin gamma subfamily A, 6 isoform 2 precurs...
LOC730109             0.005   PREDICTED: similar to hCG1811563 
LOC730109             0.005   PREDICTED: similar to hCG1811563 
SEPT10                0.004   septin 10 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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