Guide to the Human Genome
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Name: B3GALT5 Sequence: fasta or formatted (310aa) NCBI GI: 15451887
Description:

UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5

Referenced in:

Protein Glycosylation

Other entries for this name:
alt mRNA [310aa] UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5
alt mRNA [310aa] UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5
alt mRNA [310aa] UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5
alt mRNA [310aa] UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         11           2
 C cysteine            2.9          9           1
 D aspartate           4.8         15           1
 E glutamate           5.2         16           2
 F phenylalanine       8.4         26           2
 G glycine             4.8         15           2
 H histidine           1.6          5           1
 I isoleucine          3.5         11           2
 K lysine              7.1         22           2
 L leucine            11.6         36           3
 M methionine          3.2         10           2
 N asparagine          2.9          9           1
 P proline             5.5         17           2
 Q glutamine           4.2         13           1
 R arginine            5.8         18           2
 S serine              6.5         20           2
 T threonine           5.8         18           2
 V valine              6.8         21           1
 W tryptophan          1.6          5           1
 Y tyrosine            4.2         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ... 
B3GALT5               1.000   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               1.000   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               1.000   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               1.000   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 [...
B3GALT1               0.323   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALT2               0.319   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 2 [...
B3GALNT1              0.306   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.306   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.306   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.306   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.306   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 [...
B3GNT3                0.214   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT5                0.203   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT6                0.199   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra...
B3GNT7                0.196   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
LOC100289720          0.193   PREDICTED: hypothetical protein XP_002347139 
LOC100288842          0.193   PREDICTED: hypothetical protein XP_002342992 
B3GALT4               0.191   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 4 [...
B3GNT2                0.185   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltrans...
B3GNT9                0.182   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra...
B3GNT4                0.182   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT8                0.154   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GALT6               0.078   beta-1,3-galactosyltransferase 6 
B3GALNT2              0.055   beta-1,3-N-acetylgalactosaminyltransferase 2 
C1GALT1               0.015   core 1 synthase, glycoprotein-N-acetylgalactosamine 3...
CHSY1                 0.010   chondroitin sulfate synthase 1 
MIPEP                 0.008   mitochondrial intermediate peptidase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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