Guide to the Human Genome
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Name: B3GNT5 Sequence: fasta or formatted (378aa) NCBI GI: 14042986
Description:

UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         23           2
 C cysteine            2.1          8           1
 D aspartate           6.1         23           3
 E glutamate           4.0         15           2
 F phenylalanine       5.0         19           2
 G glycine             4.8         18           1
 H histidine           2.9         11           1
 I isoleucine          7.1         27           2
 K lysine              6.1         23           2
 L leucine             9.5         36           4
 M methionine          3.2         12           2
 N asparagine          4.5         17           1
 P proline             4.2         16           2
 Q glutamine           5.0         19           2
 R arginine            4.5         17           2
 S serine              6.3         24           2
 T threonine           4.5         17           1
 V valine              5.0         19           1
 W tryptophan          2.1          8           1
 Y tyrosine            6.9         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran... 
B3GNT7                0.204   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GALT2               0.201   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 2 [...
B3GNT6                0.195   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra...
LOC100289720          0.187   PREDICTED: hypothetical protein XP_002347139 
LOC100288842          0.187   PREDICTED: hypothetical protein XP_002342992 
B3GALT1               0.186   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GNT3                0.177   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT2                0.176   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltrans...
B3GNT4                0.169   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GALT5               0.164   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.164   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.164   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.164   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.164   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 [...
B3GNT9                0.163   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra...
B3GNT8                0.156   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GALT4               0.144   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 4 [...
B3GALNT1              0.143   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.143   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.143   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.143   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.143   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 [...
B3GALT6               0.048   beta-1,3-galactosyltransferase 6 
B3GALNT2              0.033   beta-1,3-N-acetylgalactosaminyltransferase 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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