Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: AVPR1B Sequence: fasta or formatted (424aa) NCBI GI: 4502333
Description:

arginine vasopressin receptor 1B

Referenced in:

Cardiovascular System
Peptide and Protein G-coupled Signals
Pituitary

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         35           2
 C cysteine            2.8         12           2
 D aspartate           3.8         16           1
 E glutamate           2.6         11           2
 F phenylalanine       3.8         16           2
 G glycine             6.4         27           4
 H histidine           1.7          7           1
 I isoleucine          4.2         18           2
 K lysine              2.1          9           1
 L leucine            15.3         65           2
 M methionine          2.6         11           1
 N asparagine          2.6         11           1
 P proline             6.6         28           1
 Q glutamine           3.1         13           2
 R arginine            6.8         29           3
 S serine              8.0         34           2
 T threonine           8.0         34           2
 V valine              5.9         25           1
 W tryptophan          3.3         14           1
 Y tyrosine            2.1          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   arginine vasopressin receptor 1B 
AVPR1A                0.406   arginine vasopressin receptor 1A 
OXTR                  0.398   oxytocin receptor 
AVPR2                 0.290   arginine vasopressin receptor 2 isoform 1 
AVPR2                 0.251   arginine vasopressin receptor 2 isoform 2 
NPSR1                 0.154   G protein-coupled receptor for asthma susceptibility...
NPSR1                 0.154   G protein-coupled receptor for asthma susceptibility...
GNRHR                 0.112   gonadotropin-releasing hormone receptor isoform 1 [Ho...
CCKBR                 0.109   cholecystokinin B receptor 
CCKAR                 0.107   cholecystokinin A receptor 
QRFPR                 0.096   G protein-coupled receptor 103 
SSTR5                 0.089   somatostatin receptor 5 
SSTR4                 0.086   somatostatin receptor 4 
HCRTR2                0.084   orexin receptor 2 
SSTR1                 0.084   somatostatin receptor 1 
GPR19                 0.084   G protein-coupled receptor 19 
PROKR2                0.083   prokineticin receptor 2 
PROKR1                0.080   G protein-coupled receptor 73 
HCRTR1                0.080   orexin receptor 1 
GALR3                 0.078   galanin receptor 3 
OPRL1                 0.078   opiate receptor-like 1 
OPRL1                 0.078   opiate receptor-like 1 
KISS1R                0.077   G protein-coupled receptor 54 
UTS2R                 0.077   urotensin 2 receptor 
OPRM1                 0.076   opioid receptor, mu 1 isoform MOR-1H 
OPRM1                 0.076   opioid receptor, mu 1 isoform MOR-1 
OPRM1                 0.076   opioid receptor, mu 1 isoform MOR-1B5 
OPRM1                 0.076   opioid receptor, mu 1 isoform MOR-1B2 
OPRM1                 0.076   opioid receptor, mu 1 isoform MOR-1B3 
OPRM1                 0.076   opioid receptor, mu 1 isoform MOR-1B1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press