Guide to the Human Genome
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Name: HCRTR1 Sequence: fasta or formatted (425aa) NCBI GI: 222080095
Description:

orexin receptor 1

Referenced in:

Hypothalamus
Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         43           2
 C cysteine            3.1         13           2
 D aspartate           2.8         12           2
 E glutamate           3.5         15           1
 F phenylalanine       4.9         21           2
 G glycine             4.2         18           1
 H histidine           1.9          8           2
 I isoleucine          4.5         19           2
 K lysine              3.5         15           1
 L leucine            12.2         52           2
 M methionine          2.6         11           1
 N asparagine          2.4         10           1
 P proline             6.4         27           2
 Q glutamine           3.1         13           1
 R arginine            6.4         27           2
 S serine              8.7         37           2
 T threonine           4.0         17           2
 V valine              9.4         40           2
 W tryptophan          2.4         10           1
 Y tyrosine            4.0         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   orexin receptor 1 
HCRTR2                0.645   orexin receptor 2 
NPFFR1                0.201   neuropeptide FF receptor 1 
NPFFR2                0.194   neuropeptide FF receptor 2 isoform 2 
NPFFR2                0.194   neuropeptide FF receptor 2 isoform 1 
NPFFR2                0.194   neuropeptide FF receptor 2 isoform 3 
PRLHR                 0.161   G protein-coupled receptor 10 
QRFPR                 0.158   G protein-coupled receptor 103 
CCKAR                 0.157   cholecystokinin A receptor 
NPY2R                 0.157   neuropeptide Y receptor Y2 
TACR3                 0.150   tachykinin receptor 3 
TACR1                 0.149   tachykinin receptor 1 isoform long 
GPR83                 0.146   G protein-coupled receptor 83 
TACR2                 0.143   tachykinin receptor 2 
KISS1R                0.143   G protein-coupled receptor 54 
CCKBR                 0.143   cholecystokinin B receptor 
GALR1                 0.140   galanin receptor 1 
GRPR                  0.132   gastrin-releasing peptide receptor 
LOC100293905          0.132   PREDICTED: similar to gastrin-releasing peptide rec...
GALR2                 0.131   galanin receptor 2 
NMBR                  0.129   neuromedin B receptor 
TRHR                  0.128   thyrotropin-releasing hormone receptor 
TACR1                 0.126   tachykinin receptor 1 isoform short 
BRS3                  0.126   bombesin-like receptor 3 
NPY1R                 0.125   neuropeptide Y receptor Y1 
PROKR1                0.125   G protein-coupled receptor 73 
ADRB1                 0.125   beta-1-adrenergic receptor 
PPYR1                 0.120   pancreatic polypeptide receptor 1 
PROKR2                0.119   prokineticin receptor 2 
OPRL1                 0.119   opiate receptor-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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