Guide to the Human Genome
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Name: ACAA1 Sequence: fasta or formatted (424aa) NCBI GI: 4501853
Description:

acetyl-Coenzyme A acyltransferase 1 isoform a

Referenced in:

Cholesterol Biosynthesis
Peroxisomes

Other entries for this name:
alt prot [331aa] acetyl-Coenzyme A acyltransferase 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.3         52           3
 C cysteine            2.4         10           1
 D aspartate           4.5         19           2
 E glutamate           4.7         20           2
 F phenylalanine       2.1          9           1
 G glycine            10.8         46           2
 H histidine           0.9          4           1
 I isoleucine          5.7         24           1
 K lysine              4.5         19           2
 L leucine             8.3         35           2
 M methionine          2.8         12           1
 N asparagine          2.8         12           1
 P proline             5.7         24           2
 Q glutamine           4.5         19           2
 R arginine            6.1         26           2
 S serine              6.6         28           2
 T threonine           5.4         23           3
 V valine              8.3         35           4
 W tryptophan          0.2          1           1
 Y tyrosine            1.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acetyl-Coenzyme A acyltransferase 1 isoform a 
ACAA1                 0.694   acetyl-Coenzyme A acyltransferase 1 isoform b [Homo...
ACAT2                 0.274   acetyl-Coenzyme A acetyltransferase 2 
ACAA2                 0.257   acetyl-coenzyme A acyltransferase 2 
HADHB                 0.213   mitochondrial trifunctional protein, beta subunit pre...
ACAT1                 0.200   acetyl-Coenzyme A acetyltransferase 1 precursor [Homo...
SCP2                  0.048   sterol carrier protein 2 isoform 1 proprotein 
SCP2                  0.033   sterol carrier protein 2 isoform 2 
C3orf20               0.010   hypothetical protein LOC84077 
LOC731985             0.006   PREDICTED: similar to ribosomal protein L23a 
UBXN10                0.006   UBX domain protein 10 
BCOR                  0.005   BCL-6 interacting corepressor isoform a 
ZBTB40                0.005   zinc finger and BTB domain containing 40 
ZBTB40                0.005   zinc finger and BTB domain containing 40 
BCOR                  0.005   BCL-6 interacting corepressor isoform c 
BCOR                  0.005   BCL-6 interacting corepressor isoform b 
BCOR                  0.005   BCL-6 interacting corepressor isoform a 
ZZEF1                 0.005   zinc finger, ZZ type with EF hand domain 1 
VAV1                  0.005   vav 1 guanine nucleotide exchange factor 
MBD2                  0.005   methyl-CpG binding domain protein 2 testis-specific i...
MBD2                  0.005   methyl-CpG binding domain protein 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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