HDX 27900

Name: HDX	Sequence: fasta or formatted (690aa)		NCBI GI: 42476009
Description: highly divergent homeobox		Referenced in: Homeobox and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 39 1 C cysteine 1.7 12 1 D aspartate 4.8 33 2 E glutamate 8.1 56 3 F phenylalanine 2.5 17 1 G glycine 4.6 32 2 H histidine 2.2 15 2 I isoleucine 4.9 34 2 K lysine 4.8 33 2 L leucine 7.1 49 3 M methionine 2.2 15 1 N asparagine 7.4 51 2 P proline 5.2 36 3 Q glutamine 6.1 42 3 R arginine 5.9 41 3 S serine 11.3 78 4 T threonine 6.4 44 2 V valine 5.8 40 2 W tryptophan 0.7 5 1 Y tyrosine 2.6 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 highly divergent homeobox MYST3 0.018 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.018 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.018 MYST histone acetyltransferase (monocytic leukemia)... POU2F1 0.013 POU class 2 homeobox 1 POU6F1 0.010 POU class 6 homeobox 1 MYO5B 0.010 myosin VB KBTBD11 0.010 kelch repeat and BTB (POZ) domain containing 11 [Homo... ZC3H18 0.009 zinc finger CCCH-type containing 18 POU2F3 0.009 POU transcription factor CCDC147 0.008 coiled-coil domain containing 147 DYSF 0.008 dysferlin isoform 1 DYSF 0.008 dysferlin isoform 5 DYSF 0.008 dysferlin isoform 6 DYSF 0.008 dysferlin isoform 14 DYSF 0.008 dysferlin isoform 11 DYSF 0.008 dysferlin isoform 10 CEP290 0.008 centrosomal protein 290kDa PAX4 0.008 paired box 4 RFX7 0.008 regulatory factor X domain containing 2 GSPT1 0.007 G1 to S phase transition 1 isoform 1 GTF2F1 0.007 general transcription factor IIF, polypeptide 1, 74... MYO5A 0.007 myosin VA isoform 2 CENPF 0.007 centromere protein F CDGAP 0.007 Cdc42 GTPase-activating protein WDR87 0.007 NYD-SP11 protein GCC2 0.007 GRIP and coiled-coil domain-containing 2 MCTP2 0.007 multiple C2 domains, transmembrane 2 isoform 2 [Hom... MCTP2 0.007 multiple C2 domains, transmembrane 2 isoform 1 [Hom... NOLC1 0.007 nucleolar and coiled-body phosphoprotein 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.