Guide to the Human Genome
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Name: MAGEB10 Sequence: fasta or formatted (347aa) NCBI GI: 73623441
Description:

melanoma antigen family B, 10

Referenced in:

Melanoma Antigen Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         28           2
 C cysteine            1.2          4           1
 D aspartate           5.5         19           1
 E glutamate           9.5         33           5
 F phenylalanine       3.2         11           1
 G glycine             5.2         18           2
 H histidine           2.3          8           1
 I isoleucine          3.5         12           2
 K lysine              7.2         25           1
 L leucine            10.1         35           2
 M methionine          2.6          9           1
 N asparagine          3.7         13           2
 P proline             5.2         18           2
 Q glutamine           4.3         15           2
 R arginine            5.8         20           2
 S serine              7.8         27           2
 T threonine           5.2         18           1
 V valine              6.3         22           1
 W tryptophan          0.9          3           1
 Y tyrosine            2.6          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   melanoma antigen family B, 10 
MAGEB4                0.473   melanoma antigen family B, 4 
MAGEB18               0.465   melanoma antigen family B, 18 
MAGEB1                0.455   melanoma antigen family B, 1 
MAGEB1                0.455   melanoma antigen family B, 1 
MAGEB1                0.455   melanoma antigen family B, 1 
LOC392435             0.447   PREDICTED: similar to hCG1811022 
LOC392435             0.447   PREDICTED: similar to hCG1811022 
LOC392435             0.447   PREDICTED: similar to hCG1811022 
MAGEB3                0.423   melanoma antigen family B, 3 
MAGEB17               0.407   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.407   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.407   PREDICTED: melanoma antigen family B, 17 
MAGEA10               0.407   melanoma antigen family A, 10 
MAGEA10               0.407   melanoma antigen family A, 10 
MAGEB2                0.395   melanoma antigen family B, 2 
MAGEB16               0.384   melanoma antigen family B, 16 
LOC100292575          0.338   PREDICTED: similar to melanoma antigen family C, 2 ...
MAGEB5                0.335   PREDICTED: melanoma antigen family B, 5 
MAGEB5                0.335   PREDICTED: melanoma antigen family B, 5 
MAGEB5                0.335   PREDICTED: melanoma antigen family B, 5 
MAGEA8                0.335   melanoma antigen family A, 8 
MAGEA9B               0.332   melanoma antigen family A, 9 -like 
MAGEA9                0.332   melanoma antigen family A, 9 
MAGEA11               0.329   melanoma antigen family A, 11 isoform b 
MAGEA11               0.329   melanoma antigen family A, 11 isoform a 
MAGEC2                0.324   melanoma antigen family C, 2 
MAGEC1                0.306   melanoma antigen family C, 1 
LOC392555             0.303   PREDICTED: similar to melanoma antigen family C, 2 ...
LOC392555             0.303   PREDICTED: similar to melanoma antigen family C, 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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