Guide to the Human Genome
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Search of human proteins with 41327779

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|41327779 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Homo
sapiens]
         (600 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|41327779 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Homo sapi...  1192   0.0  
gi|13514831 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapi...   304   1e-82
gi|38327634 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo sapi...   285   8e-77
gi|17505907 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 1 ...   216   5e-56
gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ...   201   1e-51
gi|21071032 DEAD-box protein abstrakt [Homo sapiens]                  192   6e-49
gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo sapi...   181   2e-45
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi...   179   8e-45
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi...   178   1e-44
gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sap...   177   2e-44
gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo sap...   176   7e-44
gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens]         174   2e-43
gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens]          174   2e-43
gi|41327776 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2 ...   173   4e-43
gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens]            173   5e-43
gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens]            173   5e-43
gi|51094101 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2 ...   168   1e-41
gi|164419743 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1...   168   1e-41
gi|7661920 eukaryotic translation initiation factor 4A, isoform ...   167   2e-41
gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo sap...   167   3e-41
gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ...   163   4e-40
gi|13518015 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [...   163   4e-40
gi|216548263 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2 ...   163   4e-40
gi|4503529 eukaryotic translation initiation factor 4A isoform 1...   161   2e-39
gi|83700235 eukaryotic translation initiation factor 4A2 [Homo s...   160   2e-39
gi|4758138 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens]    159   5e-39
gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo...   156   4e-38
gi|13129006 nucleolar protein GU2 [Homo sapiens]                      154   2e-37
gi|50659095 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Homo sapi...   154   2e-37
gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ...   152   1e-36

>gi|41327779 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Homo
           sapiens]
          Length = 600

 Score = 1192 bits (3083), Expect = 0.0
 Identities = 600/600 (100%), Positives = 600/600 (100%)

Query: 1   MEHVTEGSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKT 60
           MEHVTEGSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKT
Sbjct: 1   MEHVTEGSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKT 60

Query: 61  LAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGG 120
           LAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGG
Sbjct: 61  LAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGG 120

Query: 121 RNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG 180
           RNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG
Sbjct: 121 RNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG 180

Query: 181 FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPS 240
           FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPS
Sbjct: 181 FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPS 240

Query: 241 RLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIH 300
           RLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIH
Sbjct: 241 RLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIH 300

Query: 301 GKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA 360
           GKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA
Sbjct: 301 GKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA 360

Query: 361 RIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADLLPKLKSMALADRAVFEK 420
           RIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADLLPKLKSMALADRAVFEK
Sbjct: 361 RIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADLLPKLKSMALADRAVFEK 420

Query: 421 GMKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPVDVN 480
           GMKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPVDVN
Sbjct: 421 GMKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPVDVN 480

Query: 481 TDTIPFKDKIREKQRQKLLEQQRREKTENEGRRKFIKNKAWSKQKAKKEKKKKMNEKRKR 540
           TDTIPFKDKIREKQRQKLLEQQRREKTENEGRRKFIKNKAWSKQKAKKEKKKKMNEKRKR
Sbjct: 481 TDTIPFKDKIREKQRQKLLEQQRREKTENEGRRKFIKNKAWSKQKAKKEKKKKMNEKRKR 540

Query: 541 EEGSDIEDEDMEELLNDTRLLKKLKKGKITEEEFEKGLLTTGKRTIKTVDLGISDLEDDC 600
           EEGSDIEDEDMEELLNDTRLLKKLKKGKITEEEFEKGLLTTGKRTIKTVDLGISDLEDDC
Sbjct: 541 EEGSDIEDEDMEELLNDTRLLKKLKKGKITEEEFEKGLLTTGKRTIKTVDLGISDLEDDC 600


>gi|13514831 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo
           sapiens]
          Length = 875

 Score =  304 bits (779), Expect = 1e-82
 Identities = 202/551 (36%), Positives = 311/551 (56%), Gaps = 39/551 (7%)

Query: 15  PLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRR 74
           PL  + L  L+E  +  +T +Q  TI L ++ KDV   A TGSGKTLAF++P+LE L R 
Sbjct: 75  PLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRL 134

Query: 75  EEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQG 134
           +       +G +II+PTRELA Q  EVL    K+  +FS  L IGG++   + ER     
Sbjct: 135 QWT-STDGLGVLIISPTRELAYQTFEVLRKVGKNH-DFSAGLIIGGKDLKHEAERINNI- 191

Query: 135 GNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPK 194
            NI+V TPGRL    +   E +   +    L +LVLDEADR+LDMGF  ++N ++E LPK
Sbjct: 192 -NILVCTPGRL---LQHMDETVSFHAT--DLQMLVLDEADRILDMGFADTMNAVIENLPK 245

Query: 195 QRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEK 254
           +R+T LFSATQT+ V++L R  L+NP  V V EK     +   TP+ LE  Y+VC+  +K
Sbjct: 246 KRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEK-----AKYSTPATLEQNYIVCELQQK 300

Query: 255 FNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKY-KRNKIFME 313
            + L  FLR+H ++K +VFFS+C  V+Y  +    L  GV I+ +HG+ +  +R +++ E
Sbjct: 301 ISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNE 360

Query: 314 FRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLL 373
           F + ++ +L  TD+ ARG+D P VNWVLQ+D P +A+ ++HR GRTAR    G AL+ LL
Sbjct: 361 FVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILL 420

Query: 374 PMEESYINFLAINQKCPLQEMK--PQRNTADLLPKLKSMALADRAVFEKGMKAFVSYVQA 431
           P E++ +  L + +K P++E+K  P++   D+  KL+S+   D+ + E+  + FVSYV++
Sbjct: 421 PSEKAMVQQL-LQKKVPVKEIKINPEK-LIDVQKKLESILAQDQDLKERAQRCFVSYVRS 478

Query: 432 YAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPVDVNTDTIPFKDKIR 491
               +   +F +  L     A    L   P++  L+  Q              P K+ +R
Sbjct: 479 VYLMKDKEVFDVSKLPIPEYALSLGLAVAPRVRFLQKMQ------------KQPTKELVR 526

Query: 492 EKQRQKLLEQQRREKTENEGR--RKFIKNKAWSKQKAKK-----EKKKKMNEKRKREEGS 544
             Q  K++E +    T +E    R +   K    QK  K     E ++  +   + +E  
Sbjct: 527 -SQADKVIEPRAPSLTNDEVEEFRAYFNEKMSILQKGGKRLEGTEHRQDNDTGNEEQEEE 585

Query: 545 DIEDEDMEELL 555
           + ++E+MEE L
Sbjct: 586 EDDEEEMEEKL 596



 Score = 37.4 bits (85), Expect = 0.040
 Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 30/138 (21%)

Query: 487 KDKIREKQRQKLLEQQRREKT--ENEGRRKFIKNKAWSKQKAKKEKKKKMN--------- 535
           +DK  +++ +K ++ + REK   E E RR+  K +A    KAK E++  ++         
Sbjct: 732 EDKFDKEEYRKKIKAKHREKRLKEREARREANKRQA----KAKDEEEAFLDWSDDDDDDD 787

Query: 536 ---------EKRKREEGSDIEDEDMEELLNDTRLLKKLKKGKITEEEFEKGLLTTGKR-- 584
                    +  K     D + EDME  ++DT+  + +KK   +E E + G  +  ++  
Sbjct: 788 DGFDPSTLPDPDKYRSSEDSDSEDMENKISDTKKKQGMKKRSNSEVE-DVGPTSHNRKKA 846

Query: 585 ---TIKTVDLGISDLEDD 599
              T++ +D G+S  ED+
Sbjct: 847 RWDTLEPLDTGLSLAEDE 864


>gi|38327634 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo
           sapiens]
          Length = 670

 Score =  285 bits (729), Expect = 8e-77
 Identities = 186/536 (34%), Positives = 295/536 (55%), Gaps = 50/536 (9%)

Query: 8   SWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPI 67
           S+ SL   ++   L A++E+GF  MT +Q  +I   +  +D+ A A TGSGKTLAF+IP 
Sbjct: 178 SFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPA 237

Query: 68  LEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDV 127
           +E++++    + ++  G +I++PTRELA+Q   VL     H      ++ +GG N   + 
Sbjct: 238 VELIVKLRF-MPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLI-MGGSNRSAEA 295

Query: 128 ERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINT 187
           ++    G NIIVATPGRL D  +     +      ++L  LV+DEADR+LD+GFE  +  
Sbjct: 296 QKLGN-GINIIVATPGRLLDHMQNTPGFM-----YKNLQCLVIDEADRILDVGFEEELKQ 349

Query: 188 ILEFLPKQRRTGLFSATQTQEVENLVRAGLRN-PVRVSVKEKGVAASSAQKTPSRLENYY 246
           I++ LP +R+T LFSATQT++VE+L R  L+  P+ V     GV    A  T   LE  Y
Sbjct: 350 IIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYV-----GVDDDKANATVDGLEQGY 404

Query: 247 MVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKY- 305
           +VC ++++F  L  FL+ ++++K +VFFS+C  V+Y+ + L  +   + ++ IHGK K  
Sbjct: 405 VVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYI--DLPVLAIHGKQKQN 462

Query: 306 KRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHG 365
           KR   F +F    SG L+CTDV ARG+DIPEV+W++QYDPP +   ++HR GRTAR  +G
Sbjct: 463 KRTTTFFQFCNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNG 522

Query: 366 -GSALVFLLPMEESYINFLAINQKCPLQEMK-PQRNTADLLPKLKSMALADRAVFEKGMK 423
            G AL+ L P E  ++ +L    K PL E        +D+  +L+ +   +  + +   +
Sbjct: 523 RGHALLILRPEELGFLRYLK-QSKVPLSEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQE 581

Query: 424 AFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPVDVNTDT 483
           A+ SY++AY  H    IF + +L+   +A  F            G + P FV ++VN++ 
Sbjct: 582 AYKSYIRAYDSHSLKQIFNVNNLNLPQVALSF------------GFKVPPFVDLNVNSN- 628

Query: 484 IPFKDKIREKQRQKLLEQQRREKTENEGRRKFIKNKAWSKQKAKKEKKKKMNEKRK 539
                            + +++K    G   + K K   K K  K   KK ++ R+
Sbjct: 629 -----------------EGKQKKRGGGGGFGYQKTKKVEKSKIFKHISKKSSDSRQ 667


>gi|17505907 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 1
           [Homo sapiens]
          Length = 851

 Score =  216 bits (550), Expect = 5e-56
 Identities = 163/525 (31%), Positives = 258/525 (49%), Gaps = 85/525 (16%)

Query: 16  LHPQVLGALRE-LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRR 74
           LHP ++  +   L    MT VQ  +IP+ +  +D    + TGSGKTLA+ IP+++ L   
Sbjct: 237 LHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAM 296

Query: 75  EEKLKKSQVG-AIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQ 133
           E K+++S    A+++ PTRELA+Q  + +    K F      + +GG     +  R ++ 
Sbjct: 297 ESKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRK- 355

Query: 134 GGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLP 193
           G NI+++TPGRL D  +   + +  +     L  LV DEADR+LD+GFE  I  IL  + 
Sbjct: 356 GINILISTPGRLVDHIK-STKNIHFSR----LRWLVFDEADRILDLGFEKDITVILNAVN 410

Query: 194 ---KQRRTGLFSATQTQEVENLVRAGLRNPVRVSV----------KEKGVAASSAQKT-- 238
              ++R+  L SAT T+ V  L    L +PV +SV          K+K V          
Sbjct: 411 AECQKRQNVLLSATLTEGVTRLADISLHDPVSISVLDKSHDQLNPKDKAVQEVCPPPAGD 470

Query: 239 -------PSRLENYYMVCKADEKFNQLVHFL----RNHKQEKHLVFFSTCACVEY-YGKA 286
                  P  L+ +  V  +  +   L  F+    +  + +K +VFFS+C  VE+ Y   
Sbjct: 471 KLDSFAIPESLKQHVTVVPSKLRLVCLAAFILQKCKFEEDQKMVVFFSSCELVEFHYSLF 530

Query: 287 LEVLVKG---------------VKIMCIHGKMKYK-RNKIFMEFRKLQSGILVCTDVMAR 330
           L+ L+                 +K + +HG M+ + R  +F EF   + G+L+CTDV AR
Sbjct: 531 LQTLLSSSGAPASGQLPSASMRLKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAAR 590

Query: 331 GIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCP 390
           G+D+P+V W++QY+ PS+ + ++HR GRTARIG  GS+L+ L P E  Y+N LA + K  
Sbjct: 591 GLDLPQVTWIVQYNAPSSPAEYIHRIGRTARIGCHGSSLLILAPSEAEYVNSLA-SHKIN 649

Query: 391 LQEMK--------------------PQRNTADLLPKLKSMALADRAVFEK---------- 420
           + E+K                     Q++ A    +++  A   + VFE           
Sbjct: 650 VSEIKMEDILCVLTRDDCFKGKRWGAQKSHAVGPQEIRERATVLQTVFEDYVHSSERRVS 709

Query: 421 -GMKAFVSYVQAYAKH--ECNLIFRLKDLDFASLARGFALLRMPK 462
              KA  S++QAYA +  E   IF ++ L    +A+ F L   P+
Sbjct: 710 WAKKALQSFIQAYATYPRELKHIFHVRSLHLGHVAKSFGLRDAPR 754


>gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1
           [Homo sapiens]
          Length = 455

 Score =  201 bits (512), Expect = 1e-51
 Identities = 130/351 (37%), Positives = 197/351 (56%), Gaps = 22/351 (6%)

Query: 23  ALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKSQ 82
           A  +LG+   T +Q   IPL ++ +D+   A TGSGKT AF +PIL  LL   ++L    
Sbjct: 38  ACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLF--- 94

Query: 83  VGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATP 142
             A+++TPTRELA QI E            S ++  G  +  + +   K+   +II+ATP
Sbjct: 95  --ALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKP--HIIIATP 150

Query: 143 GRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFS 202
           GRL D      +G +L    R+L  LV+DEADR+L+M FE  ++ IL+ +P+ R+T LFS
Sbjct: 151 GRLIDHLEN-TKGFNL----RALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFS 205

Query: 203 ATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKFNQLVHFL 262
           AT T++V+ L RA L+NPV+ +V       SS  +T  +L+ YY+   +  K   LV+ L
Sbjct: 206 ATMTKKVQKLQRAALKNPVKCAV-------SSKYQTVEKLQQYYIFIPSKFKDTYLVYIL 258

Query: 263 RNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKM-KYKRNKIFMEFRKLQSGI 321
                   ++F STC   +     L  L  G   + +HG+M + KR     +F+     I
Sbjct: 259 NELAGNSFMIFCSTCNNTQRTALLLRNL--GFTAIPLHGQMSQSKRLGSLNKFKAKARSI 316

Query: 322 LVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFL 372
           L+ TDV +RG+DIP V+ V+ +D P+++  ++HR GRTAR G  G A+ F+
Sbjct: 317 LLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFV 367


>gi|21071032 DEAD-box protein abstrakt [Homo sapiens]
          Length = 622

 Score =  192 bits (489), Expect = 6e-49
 Identities = 128/362 (35%), Positives = 196/362 (54%), Gaps = 26/362 (7%)

Query: 20  VLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL- 78
           +L  L++ G  + TP+Q   IP  +  +D+   A TGSGKTL F +P++   L +E++L 
Sbjct: 192 ILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLP 251

Query: 79  --KKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQ-----ILWIGGRNPGEDVERFK 131
             K+     +II P+RELA Q   +L ++ +   E S       L IGG +  E +E  +
Sbjct: 252 FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIR 311

Query: 132 QQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEF 191
             G +++VATPGRL D+ ++K   LD+         L LDEADR++DMGFE  I TI  +
Sbjct: 312 H-GVHMMVATPGRLMDLLQKKMVSLDICR------YLALDEADRMIDMGFEGDIRTIFSY 364

Query: 192 LPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKA 251
              QR+T LFSAT  ++++N  ++ L  PV ++V   G A+    +     E  Y+  K 
Sbjct: 365 FKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQ-----EVEYV--KE 417

Query: 252 DEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIH-GKMKYKRNKI 310
           + K   L+  L+       L+F    A V+   + L  L+KGV+ + IH GK + +R K 
Sbjct: 418 EAKMVYLLECLQK-TPPPVLIFAEKKADVDAIHEYL--LLKGVEAVAIHGGKDQEERTKA 474

Query: 311 FMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALV 370
              FR+ +  +LV TDV ++G+D P +  V+ YD P     +VHR GRT R G+ G A  
Sbjct: 475 IEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATT 534

Query: 371 FL 372
           F+
Sbjct: 535 FI 536


>gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo
           sapiens]
          Length = 483

 Score =  181 bits (458), Expect = 2e-45
 Identities = 113/355 (31%), Positives = 188/355 (52%), Gaps = 23/355 (6%)

Query: 16  LHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
           L  ++L  + E+G+   +P+Q  +IP+ +  +D+ A A  G+GK+ A++IP+LE L    
Sbjct: 103 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERL---- 158

Query: 76  EKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGG 135
             LKK  + A++I PTRELA+Q+ ++    +KH      +   GG N  +D+ R      
Sbjct: 159 -DLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTV- 216

Query: 136 NIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQ 195
           ++++ATPGR+ D+ ++    +D       + ++VLDEAD+LL   F   +  I+  LPK 
Sbjct: 217 HVVIATPGRILDLIKKGVAKVD------HVQMIVLDEADKLLSQDFVQIMEDIILTLPKN 270

Query: 196 RRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKF 255
           R+  L+SAT    V+  + + L+ P  +++ E        + T   +  YY      +K 
Sbjct: 271 RQILLYSATFPLSVQKFMNSHLQKPYEINLME--------ELTLKGVTQYYAYVTERQKV 322

Query: 256 NQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKYK-RNKIFMEF 314
           + L       +  + ++F ++   VE   K +  L  G     IH KM+ + RN++F +F
Sbjct: 323 HCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQL--GYSCFYIHAKMRQEHRNRVFHDF 380

Query: 315 RKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSAL 369
           R      LVCTD+  RGIDI  VN V+ +D P  A  ++HR GR+ R GH G A+
Sbjct: 381 RNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAI 435


>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
           sapiens]
          Length = 1031

 Score =  179 bits (453), Expect = 8e-45
 Identities = 120/373 (32%), Positives = 191/373 (51%), Gaps = 16/373 (4%)

Query: 8   SWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPI 67
           SW    + +  ++L +L++ G+   TP+Q+  IP  M  +D+   A TGSGKT+AF++P+
Sbjct: 373 SWVQCGISM--KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430

Query: 68  LEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDV 127
              ++ +    +     A+I+TPTRELA+QI +    F+K       +   GG    E +
Sbjct: 431 FRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTL-GLRVVCVYGGTGISEQI 489

Query: 128 ERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINT 187
              K +G  IIV TPGR+ DM    A      + +R +  +VLDEADR+ DMGFE  +  
Sbjct: 490 AELK-RGAEIIVCTPGRMIDML---AANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMR 545

Query: 188 ILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYM 247
           I++ +   R+T +FSAT  + +E L R  L  P+ V V  + V  S        +E   +
Sbjct: 546 IVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSD-------VEQQVI 598

Query: 248 VCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKM-KYK 306
           V + ++KF +L+  L  H QE   V           G   +++      M +HG + +Y 
Sbjct: 599 VIEEEKKFLKLLELL-GHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYD 657

Query: 307 RNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGG 366
           R+ I  +F+     +LV T V ARG+D+  +  V+ Y  P++   +VHR GRT R G+ G
Sbjct: 658 RDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKG 717

Query: 367 SALVFLLPMEESY 379
            A  F+   +  Y
Sbjct: 718 YAYTFITEDQARY 730



 Score = 34.3 bits (77), Expect = 0.34
 Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 19/126 (15%)

Query: 487 KDKIREKQRQKLLEQQRR----------EKTENEGRRKFIKNKAWSKQKAKKEKKKKMNE 536
           + + R+++R +   + RR          +KTEN  R K   +   S ++ KK+K  K +E
Sbjct: 84  RSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKTDGGESSKEKKKDKDDKEDE 143

Query: 537 KRKREEGSDIEDEDMEELLNDTRLLKKLKKGKITEEEFEKGLLTTG--KRTIKTVDLGIS 594
           K K  +  + +   +EE +      +K +  K  EE+ +K +   G  K+ I+ +  G  
Sbjct: 144 KEK--DAGNFDQNKLEEEMRK----RKERVEKWREEQRKKAMENIGELKKEIEEMKQGKK 197

Query: 595 -DLEDD 599
             LEDD
Sbjct: 198 WSLEDD 203


>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
           sapiens]
          Length = 820

 Score =  178 bits (451), Expect = 1e-44
 Identities = 133/396 (33%), Positives = 195/396 (49%), Gaps = 50/396 (12%)

Query: 8   SWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPI 67
           SW+   +P  P +L  + + G+   TP+Q   IP+ ++N+D+   A TGSGKT AF+IP+
Sbjct: 392 SWKDSSLP--PHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPL 449

Query: 68  LEIL--LRREEKLKKSQVG--AIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNP 123
           L  +  L + +++++S  G  AII+ PTRELA QI+E    F K       +  IGG + 
Sbjct: 450 LVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLG-IRTVAVIGGISR 508

Query: 124 GEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEA 183
            +   R +  G  I++ATPGRL D+   +   L L+ C      +VLDEADR++DMGFE 
Sbjct: 509 EDQGFRLRM-GCEIVIATPGRLIDVLENRY--LVLSRCT----YVVLDEADRMIDMGFEP 561

Query: 184 SINTILEFLP--------------------------KQRRTGLFSATQTQEVENLVRAGL 217
            +  ILE +P                          K R+T +F+AT    VE L R+ L
Sbjct: 562 DVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYL 621

Query: 218 RNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTC 277
           R P  V +        SA K   R+E    +    EK  +L+  L        ++F +  
Sbjct: 622 RRPAVVYI-------GSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQK 674

Query: 278 ACVEYYGKALEVLVKGVKIMCIHG-KMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPE 336
              +   K+LE +  G     +HG K + +R       +     ILV TDV  RGIDI +
Sbjct: 675 KGCDVLAKSLEKM--GYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQD 732

Query: 337 VNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFL 372
           V+ V+ YD   N   ++HR GRT R G  G A+ FL
Sbjct: 733 VSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFL 768


>gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo
           sapiens]
          Length = 796

 Score =  177 bits (449), Expect = 2e-44
 Identities = 152/579 (26%), Positives = 271/579 (46%), Gaps = 50/579 (8%)

Query: 20  VLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLK 79
           +L A+  +GF   TP+Q A IP+ +  KD+ A A TG+GKT AF +P+LE L+ +  +  
Sbjct: 229 LLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAP 288

Query: 80  KSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIV 139
            ++V  +++ PTREL IQ+  V     + F   +  L +GG +  +  E   +   +I++
Sbjct: 289 VTRV--LVLVPTRELGIQVHSVTRQLAQ-FCNITTCLAVGGLDV-KSQEAALRAAPDILI 344

Query: 140 ATPGRLEDMFRRKAEGLDLASC----VRSLDVLVLDEADRLLDMGFEASINTILEFLPKQ 195
           ATPGRL D          L +C    + S++VL+LDEADR+LD  FE  +  I+      
Sbjct: 345 ATPGRLID---------HLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHH 395

Query: 196 RRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKF 255
           R+T LFSAT T EV++L    L+NPVR+ V       S+    P   + +  +    E  
Sbjct: 396 RQTMLFSATMTDEVKDLASVSLKNPVRIFVN------SNTDVAPFLRQEFIRIRPNREGD 449

Query: 256 NQ-LVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKM-KYKRNKIFME 313
            + +V  L       H++ F T    + +   + + + G+++  +HG + + +R +    
Sbjct: 450 REAIVAALLTRTFTDHVMLF-TQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRR 508

Query: 314 FRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLL 373
           F+  Q  ILV TDV ARG+DI  V  V+ +  P+    +VHR GRTAR G  G ++  + 
Sbjct: 509 FKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVG 568

Query: 374 PMEESYINFLAINQKCPLQ-EMKPQRNTADLLPKLKSMALADRAVFE-KGMKAFVSYVQA 431
             E   +  +    K P++  + PQ        K++ M     AV + +  +  +   +A
Sbjct: 569 EDERKMLKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVYAVLQLEAEEKEMQQSEA 628

Query: 432 YAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPVDVNTDTIPFKDKIR 491
                  L+ + K+       R +   +  +  E   K   +F         +  + K +
Sbjct: 629 QINTAKRLLEKGKEAVVQEPERSWFQTKEERKKEKIAKALQEF--------DLALRGKKK 680

Query: 492 EKQRQKLLEQQRREKTENEGRRKFIKNKAWSKQKAKKEKKKKMNE------------KRK 539
            K+  K  +++     E   + + +K + ++++ AK+ ++ K               K++
Sbjct: 681 RKKFMKDAKKKGEMTAEERSQFEILKAQMFAERLAKRNRRAKRARAMPEEEPVRGPAKKQ 740

Query: 540 REEGSDIEDEDMEELLNDTRLLKKLKKGKITEEEFEKGL 578
           ++    + DE++       + LK+ + G   EE  + GL
Sbjct: 741 KQGKKSVFDEELTN--TSKKALKQYRAGPSFEERKQLGL 777


>gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo
           sapiens]
          Length = 648

 Score =  176 bits (445), Expect = 7e-44
 Identities = 113/359 (31%), Positives = 197/359 (54%), Gaps = 20/359 (5%)

Query: 17  HPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIP-ILEILLRRE 75
           +P+V+  +++ GF   TP+QS   P+ ++  D+   A TG+GKTL +++P  + ++L+  
Sbjct: 250 YPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPS 309

Query: 76  EKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGG 135
            K ++++ G +++TPTRELA+Q++     ++  +     +   GG N  E +E  K+ G 
Sbjct: 310 LKGQRNRPGMLVLTPTRELALQVEGECCKYS--YKGLRSVCVYGGGNRDEQIEELKK-GV 366

Query: 136 NIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQ 195
           +II+ATPGRL D+       L      +++  LVLDEAD++LDMGFE  I  IL  +   
Sbjct: 367 DIIIATPGRLNDLQMSNFVNL------KNITYLVLDEADKMLDMGFEPQIMKILLDVRPD 420

Query: 196 RRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKF 255
           R+T + SAT    V  L ++ L+ P+ V V    + A S+ K         +V   +EK+
Sbjct: 421 RQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVK------QNIIVTTEEEKW 474

Query: 256 NQLVHFLRNHKQ-EKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKYK-RNKIFME 313
           + +  FL++    +K +VF S  A  ++     ++++  + +  +HG  + + R K    
Sbjct: 475 SHMQTFLQSMSSTDKVIVFVSRKAVADHLSS--DLILGNISVESLHGDREQRDREKALEN 532

Query: 314 FRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFL 372
           F+  +  IL+ TD+ +RG+D+ +V  V  +D P N   +VHR GRT R G  G ++  L
Sbjct: 533 FKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTL 591


>gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens]
          Length = 731

 Score =  174 bits (441), Expect = 2e-43
 Identities = 119/356 (33%), Positives = 187/356 (52%), Gaps = 14/356 (3%)

Query: 20  VLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLK 79
           V+  L +  F   TP+Q    PL +  +D+   A TGSGKTLA+++P +  +  +    +
Sbjct: 182 VMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLER 241

Query: 80  KSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIV 139
                 +++ PTRELA Q+ +V   + K     S  ++ GG   G  + R  ++G  I +
Sbjct: 242 GDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIY-GGAPKGPQI-RDLERGVEICI 299

Query: 140 ATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTG 199
           ATPGRL D        L      R    LVLDEADR+LDMGFE  I  I++ +   R+T 
Sbjct: 300 ATPGRLIDFLESGKTNL------RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTL 353

Query: 200 LFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKFNQLV 259
           ++SAT  +EV  L    LR+  +++V   G    SA     ++ +  M  + D K  QL+
Sbjct: 354 MWSATWPKEVRQLAEDFLRDYTQINV---GNLELSANHNILQIVDVCMESEKDHKLIQLM 410

Query: 260 HFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHG-KMKYKRNKIFMEFRKLQ 318
             +   K+ K ++F  T    +   + +     G   MCIHG K + +R+ +  EFR  +
Sbjct: 411 EEIMAEKENKTIIFVETKRRCDDLTRRMRR--DGWPAMCIHGDKSQPERDWVLNEFRSGK 468

Query: 319 SGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLP 374
           + IL+ TDV +RG+D+ +V +V+ YD P+++  +VHR GRTAR  + G+A  F  P
Sbjct: 469 APILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTP 524


>gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens]
          Length = 729

 Score =  174 bits (441), Expect = 2e-43
 Identities = 119/356 (33%), Positives = 187/356 (52%), Gaps = 14/356 (3%)

Query: 20  VLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLK 79
           V+  L +  F   TP+Q    PL +  +D+   A TGSGKTLA+++P +  +  +    +
Sbjct: 182 VMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLER 241

Query: 80  KSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIV 139
                 +++ PTRELA Q+ +V   + K     S  ++ GG   G  + R  ++G  I +
Sbjct: 242 GDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIY-GGAPKGPQI-RDLERGVEICI 299

Query: 140 ATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTG 199
           ATPGRL D        L      R    LVLDEADR+LDMGFE  I  I++ +   R+T 
Sbjct: 300 ATPGRLIDFLESGKTNL------RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTL 353

Query: 200 LFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKFNQLV 259
           ++SAT  +EV  L    LR+  +++V   G    SA     ++ +  M  + D K  QL+
Sbjct: 354 MWSATWPKEVRQLAEDFLRDYTQINV---GNLELSANHNILQIVDVCMESEKDHKLIQLM 410

Query: 260 HFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHG-KMKYKRNKIFMEFRKLQ 318
             +   K+ K ++F  T    +   + +     G   MCIHG K + +R+ +  EFR  +
Sbjct: 411 EEIMAEKENKTIIFVETKRRCDDLTRRMRR--DGWPAMCIHGDKSQPERDWVLNEFRSGK 468

Query: 319 SGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLP 374
           + IL+ TDV +RG+D+ +V +V+ YD P+++  +VHR GRTAR  + G+A  F  P
Sbjct: 469 APILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTP 524


>gi|41327776 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2
           [Homo sapiens]
          Length = 406

 Score =  173 bits (439), Expect = 4e-43
 Identities = 119/350 (34%), Positives = 177/350 (50%), Gaps = 69/350 (19%)

Query: 23  ALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKSQ 82
           A  +LG+   T +Q   IPL ++ +D+   A TGSGKT AF +PIL  LL   ++L    
Sbjct: 38  ACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLF--- 94

Query: 83  VGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATP 142
             A+++TPTRELA QI E            S ++  G  +  + +   K+   +II+ATP
Sbjct: 95  --ALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKP--HIIIATP 150

Query: 143 GRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFS 202
           GRL D      +G +L    R+L  LV+DEADR+L+M FE  ++ IL+ +P+ R+T LFS
Sbjct: 151 GRLIDHLEN-TKGFNL----RALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFS 205

Query: 203 ATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKFNQLVHFL 262
           AT T++V+ L RA L+NPV+ +V       SS  +T  +L+ YY+               
Sbjct: 206 ATMTKKVQKLQRAALKNPVKCAV-------SSKYQTVEKLQQYYIF-------------- 244

Query: 263 RNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKYKRNKIFMEFRKLQSGIL 322
                                               I  K K KR     +F+     IL
Sbjct: 245 ------------------------------------IPSKFKSKRLGSLNKFKAKARSIL 268

Query: 323 VCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFL 372
           + TDV +RG+DIP V+ V+ +D P+++  ++HR GRTAR G  G A+ F+
Sbjct: 269 LATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFV 318


>gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens]
          Length = 938

 Score =  173 bits (438), Expect = 5e-43
 Identities = 122/370 (32%), Positives = 182/370 (49%), Gaps = 18/370 (4%)

Query: 19  QVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL 78
           Q++  +R+  +   TP+Q   +P+ +  +D+   A TGSGKT AF+ P+L  ++ ++E  
Sbjct: 263 QLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELE 322

Query: 79  KKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNII 138
                 A+I+ PTREL  QI      F K +     +   GG +  E  +   Q+G  I+
Sbjct: 323 PGDGPIAVIVCPTRELCQQIHAECKRFGKAY-NLRSVAVYGGGSMWEQAKAL-QEGAEIV 380

Query: 139 VATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRT 198
           V TPGRL D  ++KA  L   S       LV DEADR+ DMGFE  + +I   +   R+T
Sbjct: 381 VCTPGRLIDHVKKKATNLQRVS------YLVFDEADRMFDMGFEYQVRSIASHVRPDRQT 434

Query: 199 GLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKFNQL 258
            LFSAT  +++E L R  L +P+RV   + G A     +    L +         K+N L
Sbjct: 435 LLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS------GPSKWNWL 488

Query: 259 VHFLRNHKQEKHLVFFSTC-ACVEYYGKALEVLVKGVKIMCIHGKM-KYKRNKIFMEFRK 316
              L        ++ F T  A  E     L+   +G  +  +HG M + +RNK+  +F+K
Sbjct: 489 TRRLVEFTSSGSVLLFVTKKANAEELANNLKQ--EGHNLGLLHGDMDQSERNKVISDFKK 546

Query: 317 LQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPME 376
               +LV TDV ARG+DIP +  V+ YD   +     HR GRT R G  G A   L P +
Sbjct: 547 KDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKD 606

Query: 377 ESYINFLAIN 386
            ++   L  N
Sbjct: 607 SNFAGDLVRN 616


>gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens]
          Length = 938

 Score =  173 bits (438), Expect = 5e-43
 Identities = 122/370 (32%), Positives = 182/370 (49%), Gaps = 18/370 (4%)

Query: 19  QVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL 78
           Q++  +R+  +   TP+Q   +P+ +  +D+   A TGSGKT AF+ P+L  ++ ++E  
Sbjct: 263 QLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELE 322

Query: 79  KKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNII 138
                 A+I+ PTREL  QI      F K +     +   GG +  E  +   Q+G  I+
Sbjct: 323 PGDGPIAVIVCPTRELCQQIHAECKRFGKAY-NLRSVAVYGGGSMWEQAKAL-QEGAEIV 380

Query: 139 VATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRT 198
           V TPGRL D  ++KA  L   S       LV DEADR+ DMGFE  + +I   +   R+T
Sbjct: 381 VCTPGRLIDHVKKKATNLQRVS------YLVFDEADRMFDMGFEYQVRSIASHVRPDRQT 434

Query: 199 GLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKFNQL 258
            LFSAT  +++E L R  L +P+RV   + G A     +    L +         K+N L
Sbjct: 435 LLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS------GPSKWNWL 488

Query: 259 VHFLRNHKQEKHLVFFSTC-ACVEYYGKALEVLVKGVKIMCIHGKM-KYKRNKIFMEFRK 316
              L        ++ F T  A  E     L+   +G  +  +HG M + +RNK+  +F+K
Sbjct: 489 TRRLVEFTSSGSVLLFVTKKANAEELANNLKQ--EGHNLGLLHGDMDQSERNKVISDFKK 546

Query: 317 LQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPME 376
               +LV TDV ARG+DIP +  V+ YD   +     HR GRT R G  G A   L P +
Sbjct: 547 KDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKD 606

Query: 377 ESYINFLAIN 386
            ++   L  N
Sbjct: 607 SNFAGDLVRN 616


>gi|51094101 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2
           [Homo sapiens]
          Length = 881

 Score =  168 bits (426), Expect = 1e-41
 Identities = 156/581 (26%), Positives = 266/581 (45%), Gaps = 68/581 (11%)

Query: 7   GSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIP 66
           G ++S+ +  +P   G +++ G+   TP+Q  TIP+ +  KDV A A TGSGKT  F++P
Sbjct: 96  GGFQSMGLS-YPVFKGIMKK-GYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLP 153

Query: 67  ILEILLRREEKLKKSQVGA--IIITPTRELAIQIDEVLSHFTKHFPEFSQI---LWIGGR 121
           + E L     K   +Q GA  +I++PTRELA+Q  +    FTK   +F+ +   L +GG 
Sbjct: 154 MFERL-----KTHSAQTGARALILSPTRELALQTLK----FTKELGKFTGLKTALILGGD 204

Query: 122 NPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGF 181
              ED      +  +II+ATPGRL  +       ++++  ++S++ +V DEADRL +MGF
Sbjct: 205 RM-EDQFAALHENPDIIIATPGRLVHV------AVEMSLKLQSVEYVVFDEADRLFEMGF 257

Query: 182 EASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSR 241
              +  I+  LP   +T LFSAT  + +    RAGL  PV + +           K   +
Sbjct: 258 AEQLQEIIARLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVD-------TKLNEQ 310

Query: 242 LENYYMVCKADEKFNQLVHFLRN--HKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCI 299
           L+  + + + D K   L+H L N    Q++ +VF +T    EY    L  L+   ++ C 
Sbjct: 311 LKTSFFLVREDTKAAVLLHLLHNVVRPQDQTVVFVATKHHAEY----LTELLTTQRVSCA 366

Query: 300 H--GKMKYKRNKIFM-EFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRC 356
           H    +     KI + +F   +   L+ TD+ ARG+DIP ++ V+ Y  P+    F+HR 
Sbjct: 367 HIYSALDPTARKINLAKFTLGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRV 426

Query: 357 GRTARIGHGGSALVFLLPMEESYINFL------AINQKCPLQEMKPQRNTADLLPKLKSM 410
           GR AR G  G+A   + P E  Y+  L      ++    PL+E         +L ++   
Sbjct: 427 GRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGRSLTLARPLKEPSGVAGVDGMLGRVPQS 486

Query: 411 ALAD---------------RAVFEKGMKAFVSYVQAYAKHECNLIFRLKDLDFASLARGF 455
            + +               R +      A   YV++        I R K++D   L    
Sbjct: 487 VVDEEDSGLQSTLEASLELRGLARVADNAQQQYVRSRPAPSPESIKRAKEMDLVGLGLHP 546

Query: 456 ALLRMPKMPELRGKQFPDFVP--------VDVNTDTIPFKDKIREKQRQKLLEQQRREKT 507
                 +  EL+  +  D +          ++N  +     ++   +RQK  +   R + 
Sbjct: 547 LFSSRFEEEELQRLRLVDSIKNYRSRATIFEINASSRDLCSQVMRAKRQKDRKAIARFQQ 606

Query: 508 ENEGRRKFIKNKAWSKQKAKKEKKKKMNEKRKREEGSDIED 548
             +GR++  +            ++K+  ++ + E G  +ED
Sbjct: 607 GQQGRQEQQEGPVGPAPSRPALQEKQPEKEEEEEAGESVED 647


>gi|164419743 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1
           [Homo sapiens]
          Length = 882

 Score =  168 bits (426), Expect = 1e-41
 Identities = 156/581 (26%), Positives = 266/581 (45%), Gaps = 68/581 (11%)

Query: 7   GSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIP 66
           G ++S+ +  +P   G +++ G+   TP+Q  TIP+ +  KDV A A TGSGKT  F++P
Sbjct: 96  GGFQSMGLS-YPVFKGIMKK-GYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLP 153

Query: 67  ILEILLRREEKLKKSQVGA--IIITPTRELAIQIDEVLSHFTKHFPEFSQI---LWIGGR 121
           + E L     K   +Q GA  +I++PTRELA+Q  +    FTK   +F+ +   L +GG 
Sbjct: 154 MFERL-----KTHSAQTGARALILSPTRELALQTLK----FTKELGKFTGLKTALILGGD 204

Query: 122 NPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGF 181
              ED      +  +II+ATPGRL  +       ++++  ++S++ +V DEADRL +MGF
Sbjct: 205 RM-EDQFAALHENPDIIIATPGRLVHV------AVEMSLKLQSVEYVVFDEADRLFEMGF 257

Query: 182 EASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSR 241
              +  I+  LP   +T LFSAT  + +    RAGL  PV + +           K   +
Sbjct: 258 AEQLQEIIARLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVD-------TKLNEQ 310

Query: 242 LENYYMVCKADEKFNQLVHFLRN--HKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCI 299
           L+  + + + D K   L+H L N    Q++ +VF +T    EY    L  L+   ++ C 
Sbjct: 311 LKTSFFLVREDTKAAVLLHLLHNVVRPQDQTVVFVATKHHAEY----LTELLTTQRVSCA 366

Query: 300 H--GKMKYKRNKIFM-EFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRC 356
           H    +     KI + +F   +   L+ TD+ ARG+DIP ++ V+ Y  P+    F+HR 
Sbjct: 367 HIYSALDPTARKINLAKFTLGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRV 426

Query: 357 GRTARIGHGGSALVFLLPMEESYINFL------AINQKCPLQEMKPQRNTADLLPKLKSM 410
           GR AR G  G+A   + P E  Y+  L      ++    PL+E         +L ++   
Sbjct: 427 GRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGRSLTLARPLKEPSGVAGVDGMLGRVPQS 486

Query: 411 ALAD---------------RAVFEKGMKAFVSYVQAYAKHECNLIFRLKDLDFASLARGF 455
            + +               R +      A   YV++        I R K++D   L    
Sbjct: 487 VVDEEDSGLQSTLEASLELRGLARVADNAQQQYVRSRPAPSPESIKRAKEMDLVGLGLHP 546

Query: 456 ALLRMPKMPELRGKQFPDFVP--------VDVNTDTIPFKDKIREKQRQKLLEQQRREKT 507
                 +  EL+  +  D +          ++N  +     ++   +RQK  +   R + 
Sbjct: 547 LFSSRFEEEELQRLRLVDSIKNYRSRATIFEINASSRDLCSQVMRAKRQKDRKAIARFQQ 606

Query: 508 ENEGRRKFIKNKAWSKQKAKKEKKKKMNEKRKREEGSDIED 548
             +GR++  +            ++K+  ++ + E G  +ED
Sbjct: 607 GQQGRQEQQEGPVGPAPSRPALQEKQPEKEEEEEAGESVED 647


>gi|7661920 eukaryotic translation initiation factor 4A, isoform 3
           [Homo sapiens]
          Length = 411

 Score =  167 bits (424), Expect = 2e-41
 Identities = 114/391 (29%), Positives = 196/391 (50%), Gaps = 26/391 (6%)

Query: 16  LHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
           L   +L  +   GF   + +Q   I   ++ +DV A++ +G+GKT  F I +L+ L    
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCL---- 100

Query: 76  EKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGG 135
             ++  +  A+I+ PTRELA+QI + L     +         IGG N GED+ +    G 
Sbjct: 101 -DIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHAC-IGGTNVGEDIRKL-DYGQ 157

Query: 136 NIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQ 195
           +++  TPGR+ DM RR++         R++ +LVLDEAD +L+ GF+  I  +  +LP  
Sbjct: 158 HVVAGTPGRVFDMIRRRSLR------TRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 211

Query: 196 RRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADE-K 254
            +  L SAT   E+  +    + +P+R+ VK         + T   ++ +++  + +E K
Sbjct: 212 TQVVLISATLPHEILEMTNKFMTDPIRILVKRD-------ELTLEGIKQFFVAVEREEWK 264

Query: 255 FNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKYK-RNKIFME 313
           F+ L          + ++F +T   V++  + +        +  +HG M  K R  I  E
Sbjct: 265 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA--NFTVSSMHGDMPQKERESIMKE 322

Query: 314 FRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLL 373
           FR   S +L+ TDV ARG+D+P+V+ ++ YD P+N   ++HR GR+ R G  G A+ F+ 
Sbjct: 323 FRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVK 382

Query: 374 PMEESYINFLAINQKCPLQEMKPQRNTADLL 404
             +   +  +       + EM    N ADL+
Sbjct: 383 NDDIRILRDIEQYYSTQIDEM--PMNVADLI 411


>gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo
           sapiens]
          Length = 619

 Score =  167 bits (423), Expect = 3e-41
 Identities = 116/359 (32%), Positives = 186/359 (51%), Gaps = 24/359 (6%)

Query: 18  PQVLGA-LRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREE 76
           P+VL   L++ G+   TP+Q   IP+ +  +D+ A A TGSGKT AF++P++   L    
Sbjct: 211 PEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRAL---- 266

Query: 77  KLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGN 136
             +     A+I+TPTRELAIQI+          P    +L +GG      + R  QQ   
Sbjct: 267 -FESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRL-QQHVK 324

Query: 137 IIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQR 196
           +I+ATPGRL D+ ++ +  L    C   + ++V+DEAD +L MGF+  +  ILE +P   
Sbjct: 325 VIIATPGRLLDIIKQSSVEL----C--GVKIVVVDEADTMLKMGFQQQVLDILENIPNDC 378

Query: 197 RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKFN 256
           +T L SAT    +E L    L NPVR+   EK +  ++ ++    +E+         K  
Sbjct: 379 QTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQIILWVED-------PAKKK 431

Query: 257 QLVHFLRNHKQEKH--LVFFSTCACVEYYGKALEVLVKGVKIMCIHG-KMKYKRNKIFME 313
           +L   L + K  K   LVF       +   +A++  + G+K + IH  K + +R  I   
Sbjct: 432 KLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVQ-KITGLKSISIHSEKSQIERKNILKG 490

Query: 314 FRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFL 372
             +    ++V T V+ RG+D+  V  V+ +D PS+   +VH+ GR  R+G  G+A+ F+
Sbjct: 491 LLEGDYEVVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQIGRVGRLGQNGTAITFI 549


>gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3
           [Homo sapiens]
          Length = 724

 Score =  163 bits (413), Expect = 4e-40
 Identities = 122/360 (33%), Positives = 192/360 (53%), Gaps = 31/360 (8%)

Query: 24  LRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLR------REEK 77
           + + G+  +TPVQ  +IP+ +  +D+ A A TGSGKT AF++PIL  ++       R ++
Sbjct: 303 IAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKE 362

Query: 78  LKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNI 137
           L++ +   II+ PTREL  QI      F+      + +++ GG   G  + +  Q G NI
Sbjct: 363 LQEPE--CIIVAPTRELVNQIYLEARKFSFGTCVRAVVIY-GGTQLGHSIRQIVQ-GCNI 418

Query: 138 IVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEF--LP-- 193
           + ATPGRL D+  ++  GL      + +  LVLDEADR+LDMGF   +  ++    +P  
Sbjct: 419 LCATPGRLMDIIGKEKIGL------KQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSK 472

Query: 194 KQRRTGLFSATQTQEVENLVRAGLR-NPVRVSVKEKGVAASSAQKTPSRLENYYMVCKAD 252
           +QR+T +FSAT  +E++ L    L+ N + V+V + G A    Q+T  ++  +       
Sbjct: 473 EQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQF------- 525

Query: 253 EKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKYK-RNKIF 311
            K  +LV  LRN   E+ +VF  T    ++    L    + +    IHG  + + R +  
Sbjct: 526 SKREKLVEILRNIGDERTMVFVETKKKADFIATFL--CQEKISTTSIHGDREQREREQAL 583

Query: 312 MEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVF 371
            +FR  +  +LV T V ARG+DI  V  V+ +D PS    +VHR GRT R G+ G A+ F
Sbjct: 584 GDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISF 643


>gi|13518015 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1
           [Homo sapiens]
          Length = 724

 Score =  163 bits (413), Expect = 4e-40
 Identities = 122/360 (33%), Positives = 192/360 (53%), Gaps = 31/360 (8%)

Query: 24  LRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLR------REEK 77
           + + G+  +TPVQ  +IP+ +  +D+ A A TGSGKT AF++PIL  ++       R ++
Sbjct: 303 IAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKE 362

Query: 78  LKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNI 137
           L++ +   II+ PTREL  QI      F+      + +++ GG   G  + +  Q G NI
Sbjct: 363 LQEPE--CIIVAPTRELVNQIYLEARKFSFGTCVRAVVIY-GGTQLGHSIRQIVQ-GCNI 418

Query: 138 IVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEF--LP-- 193
           + ATPGRL D+  ++  GL      + +  LVLDEADR+LDMGF   +  ++    +P  
Sbjct: 419 LCATPGRLMDIIGKEKIGL------KQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSK 472

Query: 194 KQRRTGLFSATQTQEVENLVRAGLR-NPVRVSVKEKGVAASSAQKTPSRLENYYMVCKAD 252
           +QR+T +FSAT  +E++ L    L+ N + V+V + G A    Q+T  ++  +       
Sbjct: 473 EQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQF------- 525

Query: 253 EKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKYK-RNKIF 311
            K  +LV  LRN   E+ +VF  T    ++    L    + +    IHG  + + R +  
Sbjct: 526 SKREKLVEILRNIGDERTMVFVETKKKADFIATFL--CQEKISTTSIHGDREQREREQAL 583

Query: 312 MEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVF 371
            +FR  +  +LV T V ARG+DI  V  V+ +D PS    +VHR GRT R G+ G A+ F
Sbjct: 584 GDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISF 643


>gi|216548263 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2
           [Homo sapiens]
          Length = 690

 Score =  163 bits (413), Expect = 4e-40
 Identities = 122/360 (33%), Positives = 192/360 (53%), Gaps = 31/360 (8%)

Query: 24  LRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLR------REEK 77
           + + G+  +TPVQ  +IP+ +  +D+ A A TGSGKT AF++PIL  ++       R ++
Sbjct: 269 IAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKE 328

Query: 78  LKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNI 137
           L++ +   II+ PTREL  QI      F+      + +++ GG   G  + +  Q G NI
Sbjct: 329 LQEPE--CIIVAPTRELVNQIYLEARKFSFGTCVRAVVIY-GGTQLGHSIRQIVQ-GCNI 384

Query: 138 IVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEF--LP-- 193
           + ATPGRL D+  ++  GL      + +  LVLDEADR+LDMGF   +  ++    +P  
Sbjct: 385 LCATPGRLMDIIGKEKIGL------KQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSK 438

Query: 194 KQRRTGLFSATQTQEVENLVRAGLR-NPVRVSVKEKGVAASSAQKTPSRLENYYMVCKAD 252
           +QR+T +FSAT  +E++ L    L+ N + V+V + G A    Q+T  ++  +       
Sbjct: 439 EQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQF------- 491

Query: 253 EKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKYK-RNKIF 311
            K  +LV  LRN   E+ +VF  T    ++    L    + +    IHG  + + R +  
Sbjct: 492 SKREKLVEILRNIGDERTMVFVETKKKADFIATFL--CQEKISTTSIHGDREQREREQAL 549

Query: 312 MEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVF 371
            +FR  +  +LV T V ARG+DI  V  V+ +D PS    +VHR GRT R G+ G A+ F
Sbjct: 550 GDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISF 609


>gi|4503529 eukaryotic translation initiation factor 4A isoform 1
           [Homo sapiens]
          Length = 406

 Score =  161 bits (407), Expect = 2e-39
 Identities = 118/410 (28%), Positives = 202/410 (49%), Gaps = 30/410 (7%)

Query: 2   EHVTEGSWESL-----PVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTG 56
           E V E +W  +      + L   +L  +   GF   + +Q   I   ++  DV A+A +G
Sbjct: 20  EGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSG 79

Query: 57  SGKTLAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQIL 116
           +GKT  F I IL+ +   E  LK +Q  A+++ PTRELA QI +V+     +        
Sbjct: 80  TGKTATFAISILQQI---ELDLKATQ--ALVLAPTRELAQQIQKVVMALGDYMGASCHAC 134

Query: 117 WIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRL 176
            IGG N   +V++ + +  +IIV TPGR+ DM  R+          + + + VLDEAD +
Sbjct: 135 -IGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLS------PKYIKMFVLDEADEM 187

Query: 177 LDMGFEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQ 236
           L  GF+  I  I + L    +  L SAT   +V  + +  +R+P+R+ VK++       +
Sbjct: 188 LSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE-------E 240

Query: 237 KTPSRLENYYMVCKADE-KFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVK 295
            T   +  +Y+  + +E K + L          + ++F +T   V++  + +    +   
Sbjct: 241 LTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHA--RDFT 298

Query: 296 IMCIHGKMKYKRNKIFM-EFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVH 354
           +  +HG M  K   + M EFR   S +L+ TD++ARGID+ +V+ V+ YD P+N   ++H
Sbjct: 299 VSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIH 358

Query: 355 RCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADLL 404
           R GR  R G  G A+  +   ++  +  +       ++EM    N ADL+
Sbjct: 359 RIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEM--PLNVADLI 406


>gi|83700235 eukaryotic translation initiation factor 4A2 [Homo
           sapiens]
          Length = 407

 Score =  160 bits (406), Expect = 2e-39
 Identities = 116/408 (28%), Positives = 204/408 (50%), Gaps = 30/408 (7%)

Query: 4   VTEGSWESL-----PVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSG 58
           V E +W  +      + L   +L  +   GF   + +Q   I   ++  DV A+A +G+G
Sbjct: 23  VIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTG 82

Query: 59  KTLAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWI 118
           KT  F I IL+ L   E + K++Q  A+++ PTRELA QI +V+     +         I
Sbjct: 83  KTATFAISILQQL---EIEFKETQ--ALVLAPTRELAQQIQKVILALGDYMGATCHAC-I 136

Query: 119 GGRNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLD 178
           GG N   ++++ + +  +I+V TPGR+ DM  R+          + + + VLDEAD +L 
Sbjct: 137 GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLS------PKWIKMFVLDEADEMLS 190

Query: 179 MGFEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKT 238
            GF+  I  I + L    +  L SAT   +V  + +  +R+P+R+ VK++       + T
Sbjct: 191 RGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKE-------ELT 243

Query: 239 PSRLENYYMVCKADE-KFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIM 297
              ++ +Y+  + +E K + L          + ++F +T   V++  + +    +   + 
Sbjct: 244 LEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA--RDFTVS 301

Query: 298 CIHGKMKYKRNKIFM-EFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRC 356
            +HG M  K   + M EFR   S +L+ TD++ARGID+ +V+ V+ YD P+N   ++HR 
Sbjct: 302 ALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRI 361

Query: 357 GRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADLL 404
           GR  R G  G A+ F+   ++  +  +       ++EM    N ADL+
Sbjct: 362 GRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEM--PMNVADLI 407


>gi|4758138 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens]
          Length = 614

 Score =  159 bits (403), Expect = 5e-39
 Identities = 112/357 (31%), Positives = 185/357 (51%), Gaps = 16/357 (4%)

Query: 20  VLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLK 79
           V+  +    F   T +Q+   P+ +   D+   A TGSGKTL++++P +  +  +    +
Sbjct: 105 VMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLER 164

Query: 80  KSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIV 139
                 +++ PTRELA Q+ +V + + +     S  ++ GG   G  + R  ++G  I +
Sbjct: 165 GDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIY-GGAPKGPQI-RDLERGVEICI 222

Query: 140 ATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTG 199
           ATPGRL D        L      R    LVLDEADR+LDMGFE  I  I++ +   R+T 
Sbjct: 223 ATPGRLIDFLECGKTNL------RRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTL 276

Query: 200 LFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKFNQLV 259
           ++SAT  +EV  L    L++ + +++   G    SA     ++ +     + DEK  +L+
Sbjct: 277 MWSATWPKEVRQLAEDFLKDYIHINI---GALELSANHNILQIVDVCHDVEKDEKLIRLM 333

Query: 260 HFLRNHKQEKHLVFFSTCA-CVEYYGKALEVLVKGVKIMCIHG-KMKYKRNKIFMEFRKL 317
             + + K+ K +VF  T   C E   K       G   M IHG K + +R+ +  EF+  
Sbjct: 334 EEIMSEKENKTIVFVETKRRCDELTRKMRR---DGWPAMGIHGDKSQQERDWVLNEFKHG 390

Query: 318 QSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLP 374
           ++ IL+ TDV +RG+D+ +V +V+ YD P+++  ++HR GRTAR    G+A  F  P
Sbjct: 391 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTP 447


>gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo
           sapiens]
          Length = 662

 Score =  156 bits (395), Expect = 4e-38
 Identities = 129/373 (34%), Positives = 187/373 (50%), Gaps = 40/373 (10%)

Query: 20  VLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPIL---------EI 70
           ++G +    +   TPVQ   IP+    +D+ A A TGSGKT AF++PIL         E 
Sbjct: 191 IMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEA 250

Query: 71  LLRREEK----LKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGED 126
           L   +E      +K    ++++ PTRELA+QI E    F+        +++ GG + G+ 
Sbjct: 251 LRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVY-GGADIGQQ 309

Query: 127 VERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASIN 186
           + R  ++G +++VATPGRL DM  R   GLD          LVLDEADR+LDMGFE  I 
Sbjct: 310 I-RDLERGCHLLVATPGRLVDMMERGKIGLDFCK------YLVLDEADRMLDMGFEPQIR 362

Query: 187 TILE---FLPKQ-RRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRL 242
            I+E     PK  R T +FSAT  +E++ L R  L   + ++V   G        T   +
Sbjct: 363 RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-------STSENI 415

Query: 243 ENYYMVCKADEKFNQLVHFLR-NHKQEKHLVFFSTCACVEYYGKALEVLV--KGVKIMCI 299
               +  +  +K + L+  L    K    LVF  T    +    +LE  +  +G     I
Sbjct: 416 TQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGAD----SLEDFLYHEGYACTSI 471

Query: 300 HGKMKYK-RNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGR 358
           HG    + R +   +FR  +S ILV T V ARG+DI  V  V+ +D PS+   +VHR GR
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGR 531

Query: 359 TARIGHGGSALVF 371
           T R+G+ G A  F
Sbjct: 532 TGRVGNLGLATSF 544


>gi|13129006 nucleolar protein GU2 [Homo sapiens]
          Length = 737

 Score =  154 bits (389), Expect = 2e-37
 Identities = 113/387 (29%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 6   EGSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVI 65
           EG++ + P+    + +  L+  G  Y+ P+Q  T       KD+ A+A TG+GKT +F I
Sbjct: 136 EGAFSNFPIS--EETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAI 193

Query: 66  PILEILLRREEKLKKSQVGAIII-TPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPG 124
           P++E L R +E +KKS+   +++  PTRELA Q+ +     T+   + S   + GG +  
Sbjct: 194 PLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITR---KLSVACFYGGTSYQ 250

Query: 125 EDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEAS 184
             +   +  G +I+V TPGR++D  +  +  LDL+     L  +VLDE D++LD+GF   
Sbjct: 251 SQINHIRN-GIDILVGTPGRIKDHLQ--SGRLDLSK----LRHVVLDEVDQMLDLGFAEQ 303

Query: 185 INTILEFLPK-----QRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTP 239
           +  I+    K       +T LFSAT  Q V  + +  +++      ++  +     QK  
Sbjct: 304 VEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKS----RYEQVDLVGKMTQKAA 359

Query: 240 SRLENYYMVCKADEKFNQLVHFLRNHK--QEKHLVFFSTCACVEYYGKALEVLVKGVKIM 297
           + +E+  + C   ++   +   L+ +   + + ++F  T   V     A+   +K     
Sbjct: 360 TTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEM--AMNPHIKQ-NAQ 416

Query: 298 CIHGKMKYKRNKIFME-FRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRC 356
           C+HG +   + +I ++ FR+    +LV T+V ARG+DIPEV+ V+Q  PP +  +++HR 
Sbjct: 417 CLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRS 476

Query: 357 GRTARIGHGGSALVFLLPMEESYINFL 383
           GRT R G  G  + F  P E   + ++
Sbjct: 477 GRTGRAGRTGICICFYQPRERGQLRYV 503


>gi|50659095 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Homo
           sapiens]
          Length = 783

 Score =  154 bits (389), Expect = 2e-37
 Identities = 118/385 (30%), Positives = 195/385 (50%), Gaps = 36/385 (9%)

Query: 6   EGSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVI 65
           EG++ + P+    + +  L+  G  ++ P+Q+ T       KD+ A+A TG+GKT +F I
Sbjct: 185 EGAFSNFPIS--EETIKLLKGRGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAI 242

Query: 66  PILEILLRREEKLKKSQVGAIII-TPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPG 124
           P++E L    +  K+ +   +++  PTRELA Q+ +  S  TK   + S   + GG   G
Sbjct: 243 PLIEKLHGELQDRKRGRAPQVLVLAPTRELANQVSKDFSDITK---KLSVACFYGGTPYG 299

Query: 125 EDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEAS 184
              ER +  G +I+V TPGR++D  +     LDL      L  +VLDE D++LDMGF   
Sbjct: 300 GQFERMRN-GIDILVGTPGRIKDHIQNGK--LDLTK----LKHVVLDEVDQMLDMGFADQ 352

Query: 185 INTILEFLPKQR-----RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTP 239
           +  IL    K+      +T LFSAT    V N+ +  +++    + ++  +     QKT 
Sbjct: 353 VEEILSVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKS----TYEQVDLIGKKTQKTA 408

Query: 240 SRLENYYMVCKADEKFNQLVHFLRNHK--QEKHLVFFSTCACVEYYGKALEVLVKGVKI- 296
             +E+  + C   ++   +   +R +   Q + ++F  T        K  + L +   I 
Sbjct: 409 ITVEHLAIKCHWTQRAAVIGDVIRVYSGHQGRTIIFCET-------KKEAQELSQNSAIK 461

Query: 297 ---MCIHGKMKYKRNKIFME-FRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAF 352
                +HG +  K+ +I ++ FR    G+LV T+V ARG+DIPEV+ V+Q  PP +  ++
Sbjct: 462 QDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESY 521

Query: 353 VHRCGRTARIGHGGSALVFLLPMEE 377
           +HR GRT R G  G  + F    EE
Sbjct: 522 IHRSGRTGRAGRTGVCICFYQHKEE 546


>gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
           [Homo sapiens]
          Length = 660

 Score =  152 bits (383), Expect = 1e-36
 Identities = 128/373 (34%), Positives = 188/373 (50%), Gaps = 40/373 (10%)

Query: 20  VLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPIL---------EI 70
           ++G +    +   TPVQ   IP+    +D+ A A TGSGKT AF++PIL         E 
Sbjct: 189 IMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEA 248

Query: 71  LLRREEK----LKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGED 126
           L   +E      +K    ++++ PTRELA+QI E    F+        +++ GG + G+ 
Sbjct: 249 LKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVY-GGADIGQQ 307

Query: 127 VERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASIN 186
           + R  ++G +++VATPGRL DM  R   GLD          LVLDEADR+LDMGFE  I 
Sbjct: 308 I-RDLERGCHLLVATPGRLVDMMERGKIGLDFCK------YLVLDEADRMLDMGFEPQIR 360

Query: 187 TILE---FLPKQ-RRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRL 242
            I+E     PK  R T +FSAT  +E++ L R  L   + ++V   G  + +  +    +
Sbjct: 361 RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWV 420

Query: 243 ENYYMVCKADEKFNQLVHFL-RNHKQEKHLVFFSTCACVEYYGKALEVLV--KGVKIMCI 299
           E+        +K + L+  L         LVF  T    +    +LE  +  +G     I
Sbjct: 421 EDL-------DKRSFLLDILGATGSDSLTLVFVETKKGAD----SLEDFLYHEGYACTSI 469

Query: 300 HGKMKYK-RNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGR 358
           HG    + R +   +FR  +S ILV T V ARG+DI  V  V+ +D PS+   +VHR GR
Sbjct: 470 HGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGR 529

Query: 359 TARIGHGGSALVF 371
           T R+G+ G A  F
Sbjct: 530 TGRVGNLGLATSF 542


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,988,558
Number of Sequences: 37866
Number of extensions: 991872
Number of successful extensions: 12413
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 349
Number of HSP's that attempted gapping in prelim test: 6519
Number of HSP's gapped (non-prelim): 3798
length of query: 600
length of database: 18,247,518
effective HSP length: 108
effective length of query: 492
effective length of database: 14,157,990
effective search space: 6965731080
effective search space used: 6965731080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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