Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 41327703
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|41327703 apoptosis-inducing, TAF9-like domain 1 isoform A
[Homo sapiens]
(138 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|41327703 apoptosis-inducing, TAF9-like domain 1 isoform A [Ho... 270 4e-73
gi|41327705 apoptosis-inducing, TAF9-like domain 1 isoform B [Ho... 192 1e-49
gi|38348374 apoptosis-inducing, TAF9-like domain 1 isoform C [Ho... 183 4e-47
gi|126722969 centromere protein T [Homo sapiens] 37 0.005
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 34 0.034
gi|24308169 dynein, axonemal, heavy chain 3 [Homo sapiens] 33 0.075
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 32 0.13
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 32 0.13
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 32 0.13
gi|62865614 TAF9 RNA polymerase II, TATA box binding protein-ass... 32 0.13
gi|4507351 TAF9 RNA polymerase II, TATA box binding protein-asso... 32 0.13
gi|12711676 UPF3 regulator of nonsense transcripts homolog A iso... 32 0.22
gi|18375525 UPF3 regulator of nonsense transcripts homolog A iso... 32 0.22
gi|151301127 dynein, axonemal, heavy chain 7 [Homo sapiens] 30 0.49
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 30 0.63
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 30 0.63
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 30 0.63
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 30 0.63
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 30 0.63
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 30 0.63
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 30 0.63
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 30 0.63
gi|20070280 transcription associated factor 9B [Homo sapiens] 30 0.63
gi|12083581 phosphoinositide-specific phospholipase C beta 1 iso... 30 0.83
gi|33356544 phosphoinositide-specific phospholipase C beta 1 iso... 30 0.83
gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 30 0.83
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 29 1.1
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 29 1.1
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 29 1.1
gi|115334679 retinoblastoma-binding protein 1 isoform III [Homo ... 29 1.1
>gi|41327703 apoptosis-inducing, TAF9-like domain 1 isoform A [Homo
sapiens]
Length = 138
Score = 270 bits (689), Expect = 4e-73
Identities = 138/138 (100%), Positives = 138/138 (100%)
Query: 1 MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN 60
MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN
Sbjct: 1 MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN 60
Query: 61 FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSED 120
FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSED
Sbjct: 61 FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSED 120
Query: 121 GSKNSRQPAEAGVVESEN 138
GSKNSRQPAEAGVVESEN
Sbjct: 121 GSKNSRQPAEAGVVESEN 138
>gi|41327705 apoptosis-inducing, TAF9-like domain 1 isoform B [Homo
sapiens]
Length = 99
Score = 192 bits (487), Expect = 1e-49
Identities = 99/99 (100%), Positives = 99/99 (100%)
Query: 40 MQFSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDK 99
MQFSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDK
Sbjct: 1 MQFSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDK 60
Query: 100 SEEIAQINLERKAQKKKKSEDGSKNSRQPAEAGVVESEN 138
SEEIAQINLERKAQKKKKSEDGSKNSRQPAEAGVVESEN
Sbjct: 61 SEEIAQINLERKAQKKKKSEDGSKNSRQPAEAGVVESEN 99
>gi|38348374 apoptosis-inducing, TAF9-like domain 1 isoform C
[Homo sapiens]
Length = 164
Score = 183 bits (464), Expect = 4e-47
Identities = 92/92 (100%), Positives = 92/92 (100%)
Query: 1 MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN 60
MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN
Sbjct: 1 MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN 60
Query: 61 FAKDLEMFARHAKRTTINTEDVKLLARRSNSL 92
FAKDLEMFARHAKRTTINTEDVKLLARRSNSL
Sbjct: 61 FAKDLEMFARHAKRTTINTEDVKLLARRSNSL 92
>gi|126722969 centromere protein T [Homo sapiens]
Length = 561
Score = 37.0 bits (84), Expect = 0.005
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 39 EMQFSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKLLARR 88
+M ++ + + + + ++ DLE+FA HA R T+ ED++LL RR
Sbjct: 472 KMPMERKALEMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLELLMRR 521
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 34.3 bits (77), Expect = 0.034
Identities = 25/107 (23%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 17 QRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTF------RQCENFAKDLEMFAR 70
QR KA V + E++ +++++ T+ + EL +Q + ++LE+ +
Sbjct: 1093 QRAKAMVDKELEA--EKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQELELVKK 1150
Query: 71 HAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKK 117
A++TT+ ++ R L + +T+K+ +I + E K QK+K+
Sbjct: 1151 DAQQTTLMNMEIADYERLMKELNQKLTNKNNKIEDLEQEIKIQKQKQ 1197
>gi|24308169 dynein, axonemal, heavy chain 3 [Homo sapiens]
Length = 4116
Score = 33.1 bits (74), Expect = 0.075
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 36 LDKEMQFSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKY 95
L K Q I SE R E + ++LE F KR + TE++K + N L K
Sbjct: 776 LHKRDQAEMDLIKRCSEFELR-LEGYHRELESFR---KREVMTTEEMKHNVEKLNELSKN 831
Query: 96 ITDKSEEIAQINLERKAQKKKKS 118
+ E IN E + +K+KS
Sbjct: 832 LNRAFAEFELINKEEELLEKEKS 854
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 32.3 bits (72), Expect = 0.13
Identities = 29/137 (21%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 2 EEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENF 61
E+E + Q + + ++ L+A VH C++ L + +S+ + +Q E
Sbjct: 108 EDEQKASHQHQEALRRELEAQVHTIRILTCQKTELQMALYYSQHAV--------KQLEGE 159
Query: 62 AKDLEMFARHAKRTTINTED-VKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSED 120
A+DL + + E + +A + +YI + ++E ++LE E
Sbjct: 160 ARDLISRLHDSWKFAGELEQALSAVATQKKKADRYIEELTKERDALSLELYRNTITDEEL 219
Query: 121 GSKNSRQPAEAGVVESE 137
KN++ + +VESE
Sbjct: 220 KEKNAKLQEKLQLVESE 236
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 32.3 bits (72), Expect = 0.13
Identities = 29/137 (21%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 2 EEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENF 61
E+E + Q + + ++ L+A VH C++ L + +S+ + +Q E
Sbjct: 108 EDEQKASHQHQEALRRELEAQVHTIRILTCQKTELQMALYYSQHAV--------KQLEGE 159
Query: 62 AKDLEMFARHAKRTTINTED-VKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSED 120
A+DL + + E + +A + +YI + ++E ++LE E
Sbjct: 160 ARDLISRLHDSWKFAGELEQALSAVATQKKKADRYIEELTKERDALSLELYRNTITDEEL 219
Query: 121 GSKNSRQPAEAGVVESE 137
KN++ + +VESE
Sbjct: 220 KEKNAKLQEKLQLVESE 236
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 32.3 bits (72), Expect = 0.13
Identities = 29/137 (21%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 2 EEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENF 61
E+E + Q + + ++ L+A VH C++ L + +S+ + +Q E
Sbjct: 169 EDEQKASHQHQEALRRELEAQVHTIRILTCQKTELQMALYYSQHAV--------KQLEGE 220
Query: 62 AKDLEMFARHAKRTTINTED-VKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSED 120
A+DL + + E + +A + +YI + ++E ++LE E
Sbjct: 221 ARDLISRLHDSWKFAGELEQALSAVATQKKKADRYIEELTKERDALSLELYRNTITDEEL 280
Query: 121 GSKNSRQPAEAGVVESE 137
KN++ + +VESE
Sbjct: 281 KEKNAKLQEKLQLVESE 297
>gi|62865614 TAF9 RNA polymerase II, TATA box binding
protein-associated factor isoform a [Homo sapiens]
Length = 264
Score = 32.3 bits (72), Expect = 0.13
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 41 QFSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKL 84
++ + I + E FR D ++++ HAK+ T++ +DV+L
Sbjct: 30 EYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRL 73
>gi|4507351 TAF9 RNA polymerase II, TATA box binding
protein-associated factor isoform a [Homo sapiens]
Length = 264
Score = 32.3 bits (72), Expect = 0.13
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 41 QFSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKL 84
++ + I + E FR D ++++ HAK+ T++ +DV+L
Sbjct: 30 EYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRL 73
>gi|12711676 UPF3 regulator of nonsense transcripts homolog A
isoform hUpf3p [Homo sapiens]
Length = 476
Score = 31.6 bits (70), Expect = 0.22
Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Query: 61 FAKDLEMFARHAKRTTINTEDV---------KLLARRSNSLLKYITDKSEEIAQINLERK 111
+ K LE + ++T+ N E + +L+ARR+ LL+YI ++ E +I E++
Sbjct: 177 YKKFLETYCVEEEKTSANPETLLGEMEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKR 236
Query: 112 AQKKKK 117
+++++
Sbjct: 237 EERRRR 242
>gi|18375525 UPF3 regulator of nonsense transcripts homolog A
isoform hUpf3pdelta [Homo sapiens]
Length = 443
Score = 31.6 bits (70), Expect = 0.22
Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Query: 61 FAKDLEMFARHAKRTTINTEDV---------KLLARRSNSLLKYITDKSEEIAQINLERK 111
+ K LE + ++T+ N E + +L+ARR+ LL+YI ++ E +I E++
Sbjct: 144 YKKFLETYCVEEEKTSANPETLLGEMEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKR 203
Query: 112 AQKKKK 117
+++++
Sbjct: 204 EERRRR 209
>gi|151301127 dynein, axonemal, heavy chain 7 [Homo sapiens]
Length = 4024
Score = 30.4 bits (67), Expect = 0.49
Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 37 DKEMQFSKQTIAAISELTFRQCENFAKDLEMFARHAKR--TTINTEDVKLLARRSNSLLK 94
++ + K+ I E +CE F ++LE +A+ ++ + + +DV+ +++ L
Sbjct: 668 EEHRKIIKEKIEQYQEGLKLRCERFVEELESYAKQSEEFYSFGDLQDVQRYLKKAQILNG 727
Query: 95 YITDKSEEIAQINLERKA--------QKKKKSEDGSKNSRQPAEAGVVESEN 138
+ +++I Q N E +A ++KK +DG + E V S N
Sbjct: 728 KLDLAADKIEQFNAEEEAFGWLPSVYPQRKKIQDGLNPYLRLYETAVEFSSN 779
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 30.0 bits (66), Expect = 0.63
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 1 MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN 60
MEEE EQQR ++RL E AL+K+ Q ++ A + Q E
Sbjct: 1344 MEEEERLAEQQRAEERERLAEV----------EAALEKQRQLAEAHAQAKA-----QAER 1388
Query: 61 FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSE 119
AK+L+ + + + E+ + A++ ++ + + ++ ++ KA++ + +E
Sbjct: 1389 EAKELQ---QRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAE 1444
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 30.0 bits (66), Expect = 0.63
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 1 MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN 60
MEEE EQQR ++RL E AL+K+ Q ++ A + Q E
Sbjct: 1348 MEEEERLAEQQRAEERERLAEV----------EAALEKQRQLAEAHAQAKA-----QAER 1392
Query: 61 FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSE 119
AK+L+ + + + E+ + A++ ++ + + ++ ++ KA++ + +E
Sbjct: 1393 EAKELQ---QRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAE 1448
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 30.0 bits (66), Expect = 0.63
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 1 MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN 60
MEEE EQQR ++RL E AL+K+ Q ++ A + Q E
Sbjct: 1344 MEEEERLAEQQRAEERERLAEV----------EAALEKQRQLAEAHAQAKA-----QAER 1388
Query: 61 FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSE 119
AK+L+ + + + E+ + A++ ++ + + ++ ++ KA++ + +E
Sbjct: 1389 EAKELQ---QRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAE 1444
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 30.0 bits (66), Expect = 0.63
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 1 MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN 60
MEEE EQQR ++RL E AL+K+ Q ++ A + Q E
Sbjct: 1312 MEEEERLAEQQRAEERERLAEV----------EAALEKQRQLAEAHAQAKA-----QAER 1356
Query: 61 FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSE 119
AK+L+ + + + E+ + A++ ++ + + ++ ++ KA++ + +E
Sbjct: 1357 EAKELQ---QRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAE 1412
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 30.0 bits (66), Expect = 0.63
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 1 MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN 60
MEEE EQQR ++RL E AL+K+ Q ++ A + Q E
Sbjct: 1481 MEEEERLAEQQRAEERERLAEV----------EAALEKQRQLAEAHAQAKA-----QAER 1525
Query: 61 FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSE 119
AK+L+ + + + E+ + A++ ++ + + ++ ++ KA++ + +E
Sbjct: 1526 EAKELQ---QRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAE 1581
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 30.0 bits (66), Expect = 0.63
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 1 MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN 60
MEEE EQQR ++RL E AL+K+ Q ++ A + Q E
Sbjct: 1322 MEEEERLAEQQRAEERERLAEV----------EAALEKQRQLAEAHAQAKA-----QAER 1366
Query: 61 FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSE 119
AK+L+ + + + E+ + A++ ++ + + ++ ++ KA++ + +E
Sbjct: 1367 EAKELQ---QRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAE 1422
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 30.0 bits (66), Expect = 0.63
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 1 MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN 60
MEEE EQQR ++RL E AL+K+ Q ++ A + Q E
Sbjct: 1330 MEEEERLAEQQRAEERERLAEV----------EAALEKQRQLAEAHAQAKA-----QAER 1374
Query: 61 FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSE 119
AK+L+ + + + E+ + A++ ++ + + ++ ++ KA++ + +E
Sbjct: 1375 EAKELQ---QRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAE 1430
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 30.0 bits (66), Expect = 0.63
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 1 MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN 60
MEEE EQQR ++RL E AL+K+ Q ++ A + Q E
Sbjct: 1371 MEEEERLAEQQRAEERERLAEV----------EAALEKQRQLAEAHAQAKA-----QAER 1415
Query: 61 FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSE 119
AK+L+ + + + E+ + A++ ++ + + ++ ++ KA++ + +E
Sbjct: 1416 EAKELQ---QRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAE 1471
>gi|20070280 transcription associated factor 9B [Homo sapiens]
Length = 251
Score = 30.0 bits (66), Expect = 0.63
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 41 QFSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKL 84
++ + I + E FR D ++++ HAK+ ++ +DV+L
Sbjct: 30 EYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPNVDADDVRL 73
>gi|12083581 phosphoinositide-specific phospholipase C beta 1
isoform a [Homo sapiens]
Length = 1216
Score = 29.6 bits (65), Expect = 0.83
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 99 KSEEIAQINLERKAQKKKKSEDGSKNSRQPAEAGVVESEN 138
+++++A + LE + + KK+++ G S P+EA +EN
Sbjct: 823 RAKQLAALTLEDEEEVKKEADPGETPSEAPSEARTTPAEN 862
Score = 27.7 bits (60), Expect = 3.1
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 63 KDLEMFARHAKRTTINTED-VKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSEDG 121
K + F + K+ +D VK +++ L+K T K EI L R+A +K ++
Sbjct: 914 KQQKSFVKLQKKHYKEMKDLVKRHHKKTTDLIKEHTTKYNEIQNDYLRRRAALEKSAKKD 973
Query: 122 SKNSRQPA 129
SK +P+
Sbjct: 974 SKKKSEPS 981
>gi|33356544 phosphoinositide-specific phospholipase C beta 1
isoform b [Homo sapiens]
Length = 1173
Score = 29.6 bits (65), Expect = 0.83
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 99 KSEEIAQINLERKAQKKKKSEDGSKNSRQPAEAGVVESEN 138
+++++A + LE + + KK+++ G S P+EA +EN
Sbjct: 823 RAKQLAALTLEDEEEVKKEADPGETPSEAPSEARTTPAEN 862
Score = 27.7 bits (60), Expect = 3.1
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 63 KDLEMFARHAKRTTINTED-VKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSEDG 121
K + F + K+ +D VK +++ L+K T K EI L R+A +K ++
Sbjct: 914 KQQKSFVKLQKKHYKEMKDLVKRHHKKTTDLIKEHTTKYNEIQNDYLRRRAALEKSAKKD 973
Query: 122 SKNSRQPA 129
SK +P+
Sbjct: 974 SKKKSEPS 981
>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
Length = 2028
Score = 29.6 bits (65), Expect = 0.83
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 32 EEVALDKEMQFSKQTIAAISELTFRQCENFAKDL-EMFARHAKRTTINTEDVKLLARRSN 90
E ALDKE+ + + EL E +DL + HA+ T ED+ L +S
Sbjct: 868 ESRALDKELARCRDAAGKLKEL-----EKDNRDLTKQVTVHARTLTTLREDLVLEKLKSQ 922
Query: 91 SLLKYITDKSEEIAQINLERK 111
L + S+E+ ++ L R+
Sbjct: 923 QLSSELDKLSQELEKVGLNRE 943
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 29.3 bits (64), Expect = 1.1
Identities = 28/137 (20%), Positives = 58/137 (42%), Gaps = 9/137 (6%)
Query: 2 EEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENF 61
E+E + Q + + ++ L+A V C++ L + +S+ + +Q E
Sbjct: 96 EDEQKASHQHQEALRRELEAQVQTIRILTCQKTELQMALYYSQHAV--------KQLEGE 147
Query: 62 AKDLEMFARHAKRTTINTED-VKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSED 120
A+DL + + E + +A + +YI + ++E ++LE E
Sbjct: 148 ARDLISRLHDSWKFAGELEQALSAVATQKKKADRYIEELTKERDALSLELYRNTITDEEL 207
Query: 121 GSKNSRQPAEAGVVESE 137
KN++ + +VESE
Sbjct: 208 KEKNAKLQEKLQLVESE 224
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 29.3 bits (64), Expect = 1.1
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 20/122 (16%)
Query: 6 ETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENF-AKD 64
+++ +Q Y+ +LKA L EE+ L + T + F + + F A+
Sbjct: 880 DSKNKQELEYKSKLKA--------LNEELHLQR----INPTTVKMKSSVFDEDKTFVAET 927
Query: 65 LEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQ-------INLERKAQKKKK 117
LEM K TT E +++ R L + ++D SE++ Q +N E K+ K++K
Sbjct: 928 LEMGEVVEKDTTELMEKLEVTKREKLELSQRLSDLSEQLKQKHGEISFLNEEVKSLKQEK 987
Query: 118 SE 119
+
Sbjct: 988 EQ 989
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 29.3 bits (64), Expect = 1.1
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 20/122 (16%)
Query: 6 ETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENF-AKD 64
+++ +Q Y+ +LKA L EE+ L + T + F + + F A+
Sbjct: 880 DSKNKQELEYKSKLKA--------LNEELHLQR----INPTTVKMKSSVFDEDKTFVAET 927
Query: 65 LEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQ-------INLERKAQKKKK 117
LEM K TT E +++ R L + ++D SE++ Q +N E K+ K++K
Sbjct: 928 LEMGEVVEKDTTELMEKLEVTKREKLELSQRLSDLSEQLKQKHGEISFLNEEVKSLKQEK 987
Query: 118 SE 119
+
Sbjct: 988 EQ 989
>gi|115334679 retinoblastoma-binding protein 1 isoform III [Homo
sapiens]
Length = 1188
Score = 29.3 bits (64), Expect = 1.1
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 78 NTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKK---SEDGSKNSRQPAEAGVV 134
+TE + L + + KY E+A I+ RK KKK S G+ S ++ G+
Sbjct: 1113 STERISFLQEKLQEIRKYYMSLKSEVATIDRRRKRLKKKDREVSHAGASMSSASSDTGMS 1172
Query: 135 ESEN 138
S +
Sbjct: 1173 PSSS 1176
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.123 0.320
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,341,676
Number of Sequences: 37866
Number of extensions: 157519
Number of successful extensions: 853
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 797
Number of HSP's gapped (non-prelim): 129
length of query: 138
length of database: 18,247,518
effective HSP length: 91
effective length of query: 47
effective length of database: 14,801,712
effective search space: 695680464
effective search space used: 695680464
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.