Guide to the Human Genome
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Name: ZNF334 Sequence: fasta or formatted (642aa) NCBI GI: 40807459
Description:

zinc finger protein 334 isoform b

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [680aa] zinc finger protein 334 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.5         16           1
 C cysteine            6.4         41           1
 D aspartate           1.4          9           2
 E glutamate           9.2         59           2
 F phenylalanine       4.8         31           2
 G glycine             5.9         38           2
 H histidine           6.5         42           2
 I isoleucine          4.4         28           1
 K lysine             11.4         73           2
 L leucine             4.8         31           2
 M methionine          0.9          6           1
 N asparagine          5.8         37           1
 P proline             3.3         21           1
 Q glutamine           4.4         28           1
 R arginine            6.5         42           2
 S serine              6.9         44           1
 T threonine           7.2         46           1
 V valine              3.6         23           2
 W tryptophan          0.5          3           1
 Y tyrosine            3.7         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 334 isoform b 
ZNF334                1.000   zinc finger protein 334 isoform a 
ZNF33B                0.462   zinc finger protein 33B 
ZNF12                 0.457   zinc finger protein 12 isoform a 
ZNF33A                0.454   zinc finger protein 33A isoform a 
ZNF33A                0.453   zinc finger protein 33A isoform b 
LOC100287429          0.438   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.438   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.438   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.438   zinc finger protein 84 
ZNF84                 0.438   zinc finger protein 84 
ZNF569                0.432   zinc finger protein 569 
ZNF12                 0.431   zinc finger protein 12 isoform b 
RBAK                  0.424   RB-associated KRAB repressor 
ZNF184                0.423   zinc finger protein 184 
ZNF268                0.414   zinc finger protein 268 
ZNF658                0.411   zinc finger protein 658 
ZNF420                0.408   zinc finger protein 420 
ZNF567                0.406   zinc finger protein 567 
ZNF624                0.400   zinc finger protein 624 
ZNF41                 0.399   zinc finger protein 41 
ZNF41                 0.399   zinc finger protein 41 
ZNF782                0.395   zinc finger protein 782 
ZNF717                0.394   zinc finger protein 717 
ZNF761                0.394   zinc finger protein 761 
ZNF585B               0.394   zinc finger protein 585B 
ZNF135                0.392   zinc finger protein 135 
ZNF585A               0.392   zinc finger protein 585A 
ZNF585A               0.392   zinc finger protein 585A 
ZNF546                0.389   zinc finger protein 546 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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