THRA 27581

Name: THRA	Sequence: fasta or formatted (410aa)		NCBI GI: 40806160
Description: thyroid hormone receptor, alpha isoform 1		Referenced in: Organs and Hormones Nuclear Receptors Retroviral Oncogene Homologs Thyroid and Thyroid Hormone Receptor
Other entries for this name: alt prot [490aa] thyroid hormone receptor, alpha isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 22 2 C cysteine 4.6 19 2 D aspartate 6.6 27 2 E glutamate 7.8 32 2 F phenylalanine 3.9 16 2 G glycine 4.9 20 2 H histidine 2.7 11 1 I isoleucine 5.4 22 2 K lysine 8.3 34 2 L leucine 9.3 38 2 M methionine 3.4 14 1 N asparagine 2.4 10 1 P proline 4.9 20 2 Q glutamine 4.1 17 2 R arginine 6.6 27 3 S serine 6.8 28 1 T threonine 4.4 18 1 V valine 5.6 23 2 W tryptophan 0.7 3 1 Y tyrosine 2.2 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 thyroid hormone receptor, alpha isoform 1 THRA 0.900 thyroid hormone receptor, alpha isoform 2 THRB 0.770 thyroid hormone receptor, beta THRB 0.770 thyroid hormone receptor, beta THRB 0.770 thyroid hormone receptor, beta RARB 0.275 retinoic acid receptor, beta isoform 1 RARA 0.274 retinoic acid receptor, alpha isoform 1 RARA 0.274 retinoic acid receptor, alpha isoform 2 RARA 0.274 retinoic acid receptor, alpha isoform 1 RARG 0.267 retinoic acid receptor, gamma isoform 2 RARG 0.267 retinoic acid receptor, gamma isoform 1 RARB 0.217 retinoic acid receptor, beta isoform 2 NR1H3 0.209 nuclear receptor subfamily 1, group H, member 3 iso... NR1H3 0.209 nuclear receptor subfamily 1, group H, member 3 iso... NR1H2 0.190 nuclear receptor subfamily 1, group H, member 2 [Hom... NR1H4 0.187 nuclear receptor subfamily 1, group H, member 4 [Homo... RARA 0.169 retinoic acid receptor, alpha isoform 4 RXRA 0.169 retinoid X receptor, alpha NR1I3 0.168 constitutive androstane receptor isoform 3 NR1I3 0.163 constitutive androstane receptor isoform 2 NR4A2 0.162 nuclear receptor subfamily 4, group A, member 2 [Homo... VDR 0.160 vitamin D (1,25-dihydroxyvitamin D3) receptor VDR 0.160 vitamin D (1,25-dihydroxyvitamin D3) receptor NR1I2 0.160 nuclear receptor subfamily 1, group I, member 2 isof... NR1I3 0.158 constitutive androstane receptor isoform 1 NR1I3 0.154 constitutive androstane receptor isoform 6 NR1I3 0.154 constitutive androstane receptor isoform 7 RXRB 0.153 retinoid X receptor, beta ESRRG 0.146 estrogen-related receptor gamma isoform 2 ESRRG 0.146 estrogen-related receptor gamma isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.