NR1I3 2059

Name: NR1I3	Sequence: fasta or formatted (340aa)		NCBI GI: 117938729
Description: constitutive androstane receptor isoform 6		Referenced in: Nuclear Receptors
Other entries for this name: alt prot [280aa] constitutive androstane receptor isoform 11 alt prot [309aa] constitutive androstane receptor isoform 5 alt prot [324aa] constitutive androstane receptor isoform 9 alt prot [315aa] constitutive androstane receptor isoform 12 alt prot [296aa] constitutive androstane receptor isoform 8 alt prot [267aa] constitutive androstane receptor isoform 15 alt prot [311aa] constitutive androstane receptor isoform 13 alt prot [339aa] constitutive androstane receptor isoform 7 alt prot [306aa] constitutive androstane receptor isoform 14 alt prot [319aa] constitutive androstane receptor isoform 10 alt prot [352aa] constitutive androstane receptor isoform 2 alt prot [314aa] constitutive androstane receptor isoform 4 alt prot [357aa] constitutive androstane receptor isoform 1 alt prot [348aa] constitutive androstane receptor isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 25 2 C cysteine 3.5 12 1 D aspartate 3.5 12 1 E glutamate 5.6 19 2 F phenylalanine 5.6 19 2 G glycine 6.5 22 1 H histidine 3.5 12 2 I isoleucine 4.4 15 1 K lysine 4.4 15 1 L leucine 11.8 40 2 M methionine 2.6 9 1 N asparagine 1.5 5 1 P proline 6.5 22 2 Q glutamine 7.9 27 2 R arginine 7.4 25 2 S serine 4.1 14 1 T threonine 6.5 22 2 V valine 5.0 17 2 W tryptophan 0.9 3 1 Y tyrosine 1.5 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 constitutive androstane receptor isoform 6 NR1I3 0.966 constitutive androstane receptor isoform 7 NR1I3 0.893 constitutive androstane receptor isoform 1 NR1I3 0.886 constitutive androstane receptor isoform 13 NR1I3 0.877 constitutive androstane receptor isoform 12 NR1I3 0.877 constitutive androstane receptor isoform 3 NR1I3 0.868 constitutive androstane receptor isoform 2 NR1I3 0.861 constitutive androstane receptor isoform 14 NR1I3 0.840 constitutive androstane receptor isoform 8 NR1I3 0.788 constitutive androstane receptor isoform 9 NR1I3 0.763 constitutive androstane receptor isoform 10 NR1I3 0.760 constitutive androstane receptor isoform 4 NR1I3 0.742 constitutive androstane receptor isoform 5 NR1I3 0.726 constitutive androstane receptor isoform 15 NR1I3 0.628 constitutive androstane receptor isoform 11 NR1I2 0.356 nuclear receptor subfamily 1, group I, member 2 isof... NR1I2 0.338 nuclear receptor subfamily 1, group I, member 2 isof... NR1I2 0.338 nuclear receptor subfamily 1, group I, member 2 isof... NR1H3 0.212 nuclear receptor subfamily 1, group H, member 3 iso... NR1H3 0.212 nuclear receptor subfamily 1, group H, member 3 iso... THRB 0.196 thyroid hormone receptor, beta THRB 0.196 thyroid hormone receptor, beta THRB 0.196 thyroid hormone receptor, beta THRA 0.187 thyroid hormone receptor, alpha isoform 1 THRA 0.187 thyroid hormone receptor, alpha isoform 2 NR1H4 0.178 nuclear receptor subfamily 1, group H, member 4 [Homo... VDR 0.169 vitamin D (1,25-dihydroxyvitamin D3) receptor VDR 0.169 vitamin D (1,25-dihydroxyvitamin D3) receptor RARG 0.163 retinoic acid receptor, gamma isoform 2 RARG 0.163 retinoic acid receptor, gamma isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.