Search of human proteins with 40786404

Search of human proteins with 40786404

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|40786404 coiled-coil domain containing 23 [Homo sapiens]
         (66 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|40786404 coiled-coil domain containing 23 [Homo sapiens]           133   3e-32
gi|238908495 similar to pleckstrin homology domain protein (5V32...    32   0.083
gi|94538370 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform ...    32   0.14 
gi|193788632 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform...    32   0.14 
gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sap...    31   0.19 
gi|239750213 PREDICTED: hypothetical protein [Homo sapiens]            31   0.24 
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ...    31   0.24 
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    30   0.41 
gi|148746195 trichohyalin [Homo sapiens]                               30   0.54 
gi|131889097 cancer susceptibility candidate 1 isoform b [Homo s...    30   0.54 
gi|131889447 cancer susceptibility candidate 1 isoform c [Homo s...    30   0.54 
gi|131888105 cancer susceptibility candidate 1 isoform a [Homo s...    30   0.54 
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap...    29   0.70 
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap...    29   0.70 
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap...    29   0.70 
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi...    29   0.70 
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa...    29   0.92 
gi|166706903 guanylate binding protein 1, interferon-inducible, ...    29   0.92 
gi|148612849 kinesin heavy chain member 2 isoform 2 [Homo sapiens]     29   0.92 
gi|148612877 kinesin heavy chain member 2 isoform 1 [Homo sapiens]     29   0.92 
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa...    28   1.2  
gi|157502225 Janus kinase and microtubule interacting protein 3 ...    28   1.2  
gi|33469974 activating transcription factor 4 [Homo sapiens]           28   1.2  
gi|33469976 activating transcription factor 4 [Homo sapiens]           28   1.2  
gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens]                28   1.2  
gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens]                28   1.2  
gi|89363020 nuclear transcription factor, X-box binding-like 1 [...    28   1.2  
gi|19923879 Josephin domain containing 2 [Homo sapiens]                28   1.2  
gi|41281453 serine/threonine kinase 2 [Homo sapiens]                   28   1.6  
gi|45504371 family with sequence similarity 9, member B [Homo sa...    28   1.6  

>gi|40786404 coiled-coil domain containing 23 [Homo sapiens]
          Length = 66

 Score =  133 bits (334), Expect = 3e-32
 Identities = 66/66 (100%), Positives = 66/66 (100%)

Query: 1  MDPPARKEKTKVKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQ 60
          MDPPARKEKTKVKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQ
Sbjct: 1  MDPPARKEKTKVKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQ 60

Query: 61 MQPPGE 66
          MQPPGE
Sbjct: 61 MQPPGE 66


>gi|238908495 similar to pleckstrin homology domain protein (5V327)
           [Homo sapiens]
          Length = 506

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 16/50 (32%), Positives = 33/50 (66%), Gaps = 1/50 (2%)

Query: 13  KESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQMQ 62
           KE    ++K  +++ +  L++ QR E+  LN+V+ E E+QQF+E  ++++
Sbjct: 161 KEKQEYLDKLMEETEELCLQREQREELERLNQVL-EAEKQQFEEVVQELR 209


>gi|94538370 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform 1
           [Homo sapiens]
          Length = 621

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 15/47 (31%), Positives = 26/47 (55%)

Query: 7   KEKTKVKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQ 53
           KE+ K K+   +  KA+ K  +QE K++QR       R+  E E+++
Sbjct: 284 KEEEKAKKEAEKKAKAEAKRKEQEAKEKQRQAELEAARLAKEKEEEE 330


>gi|193788632 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform 2
           [Homo sapiens]
          Length = 568

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 15/47 (31%), Positives = 26/47 (55%)

Query: 7   KEKTKVKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQ 53
           KE+ K K+   +  KA+ K  +QE K++QR       R+  E E+++
Sbjct: 284 KEEEKAKKEAEKKAKAEAKRKEQEAKEKQRQAELEAARLAKEKEEEE 330


>gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo
           sapiens]
          Length = 2603

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)

Query: 7   KEKTKVKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQMQPPG 65
           ++K K+ E + +VE+  Q   QQ+LK +Q  E+ A  R+  + +QQQ  +    + P G
Sbjct: 860 QKKQKILEELQKVERELQLKTQQQLK-KQYLEVKA-QRIQLQQQQQQSCQHLGLLTPVG 916


>gi|239750213 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 248

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 18/60 (30%), Positives = 29/60 (48%)

Query: 7   KEKTKVKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQMQPPGE 66
           KEK K KE     EK K+K  +++ K++++ +   LN  +  LE   + E        GE
Sbjct: 78  KEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKKKLNAKVCGLEIASWSEMTTAAAGEGE 137



 Score = 27.7 bits (60), Expect = 2.0
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 7   KEKTKVKESVSRVEKAKQKSAQQELKQRQR 36
           KEK K KE     EK K+K  ++E K++++
Sbjct: 74  KEKEKEKEKEKEKEKEKEKEKEKEKKKKKK 103



 Score = 26.2 bits (56), Expect = 6.0
 Identities = 11/30 (36%), Positives = 19/30 (63%)

Query: 7   KEKTKVKESVSRVEKAKQKSAQQELKQRQR 36
           KEK K KE     EK K+K  +++ K++++
Sbjct: 76  KEKEKEKEKEKEKEKEKEKEKEKKKKKKKK 105


>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
           sapiens]
          Length = 956

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%)

Query: 6   RKEKTKVKESVSRV--EKAKQKSAQQELKQRQRAE 38
           R+EK K+KE   R   E  K+K  ++ELK+++R E
Sbjct: 354 REEKEKLKEEAKRAKEEAKKKKEEEKELKEKERRE 388


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 12/43 (27%), Positives = 28/43 (65%)

Query: 20   EKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQMQ 62
            ++ +Q+  QQ+L+Q+Q+ ++    + + + +QQQ  +F +Q Q
Sbjct: 3929 QQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQ 3971



 Score = 26.9 bits (58), Expect = 3.5
 Identities = 13/49 (26%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 15   SVSRVEKAKQKSAQQELKQRQRAEIYALNRV-MTELEQQQFDEFCKQMQ 62
            S+ ++++ +Q   QQ+L+Q+Q+ ++    ++   +L+QQQ  +  +Q Q
Sbjct: 3896 SLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQ 3944



 Score = 26.2 bits (56), Expect = 6.0
 Identities = 11/48 (22%), Positives = 31/48 (64%)

Query: 6    RKEKTKVKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQ 53
            ++++ ++++   ++++ +Q+  QQ  +Q+Q+ ++  LN+  T L  QQ
Sbjct: 3942 QQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQ 3989


>gi|148746195 trichohyalin [Homo sapiens]
          Length = 1943

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)

Query: 6   RKEKTKVKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQ 53
           RKE+ K++E     E  +Q+  Q+E +Q ++ E   L R   E EQQQ
Sbjct: 254 RKEEEKLQEE----EPQRQRELQEEEEQLRKLERQELRRERQEEEQQQ 297



 Score = 26.6 bits (57), Expect = 4.6
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 3/63 (4%)

Query: 3   PPARKEKTK---VKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCK 59
           PP R+++ +    +E   R ++   +  ++E ++RQR E     + + E EQ Q  E  +
Sbjct: 788 PPLREQRERQLRAEERQQREQRFLPEEEEKEQRRRQRREREKELQFLEEEEQLQRRERAQ 847

Query: 60  QMQ 62
           Q+Q
Sbjct: 848 QLQ 850


>gi|131889097 cancer susceptibility candidate 1 isoform b [Homo
           sapiens]
          Length = 716

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 12  VKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFD 55
           VK+ V  VEKA  K  ++E KQ++R   + +     ++E++Q D
Sbjct: 281 VKDDVKNVEKAISKEVEEESKQQERGS-HLIQEEEIKVEEEQGD 323


>gi|131889447 cancer susceptibility candidate 1 isoform c [Homo
           sapiens]
          Length = 690

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 12  VKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFD 55
           VK+ V  VEKA  K  ++E KQ++R   + +     ++E++Q D
Sbjct: 345 VKDDVKNVEKAISKEVEEESKQQERGS-HLIQEEEIKVEEEQGD 387


>gi|131888105 cancer susceptibility candidate 1 isoform a [Homo
           sapiens]
          Length = 722

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 12  VKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFD 55
           VK+ V  VEKA  K  ++E KQ++R   + +     ++E++Q D
Sbjct: 287 VKDDVKNVEKAISKEVEEESKQQERGS-HLIQEEEIKVEEEQGD 329


>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
           sapiens]
          Length = 1293

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 16/50 (32%), Positives = 28/50 (56%)

Query: 13  KESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQMQ 62
           +E   R E+   +  Q+E  +RQR +  AL R   E E+QQ +E  ++++
Sbjct: 769 EERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLE 818


>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo
           sapiens]
          Length = 1320

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 16/50 (32%), Positives = 28/50 (56%)

Query: 13  KESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQMQ 62
           +E   R E+   +  Q+E  +RQR +  AL R   E E+QQ +E  ++++
Sbjct: 796 EERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLE 845


>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo
           sapiens]
          Length = 1299

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 16/50 (32%), Positives = 28/50 (56%)

Query: 13  KESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQMQ 62
           +E   R E+   +  Q+E  +RQR +  AL R   E E+QQ +E  ++++
Sbjct: 775 EERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLE 824


>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo
           sapiens]
          Length = 1299

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 16/50 (32%), Positives = 28/50 (56%)

Query: 13  KESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQMQ 62
           +E   R E+   +  Q+E  +RQR +  AL R   E E+QQ +E  ++++
Sbjct: 775 EERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLE 824


>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
           sapiens]
          Length = 668

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 4/59 (6%)

Query: 6   RKEKTKVKESVSRVEKAKQKSAQQELK-QRQRAEIYALNRVMTELEQ---QQFDEFCKQ 60
           R+++ K++E   ++ + K+K  +QE K   Q  +I     +M E E+   +Q ++ C+Q
Sbjct: 567 RRQEEKIREQEEKIREQKEKIREQEEKIWEQEEKIREQEEMMQEQEEKMWEQEEKMCEQ 625


>gi|166706903 guanylate binding protein 1, interferon-inducible,
           67kDa [Homo sapiens]
          Length = 592

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 13  KESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQM 61
           KE    VE+ K +SAQ   K  Q  E+   N  M E +++ + E  KQ+
Sbjct: 485 KEKEIEVERVKAESAQASAKMLQ--EMQRKNEQMMEQKERSYQEHLKQL 531


>gi|148612849 kinesin heavy chain member 2 isoform 2 [Homo sapiens]
          Length = 744

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 3   PPARKEKTKVKESVSRVEK-AKQKSAQQELKQRQRAEIYALN 43
           PP+R++   VKE     EK  K++  QQEL++++  ++ A N
Sbjct: 151 PPSRRKSNCVKEVEKLQEKREKRRLQQQELREKRAQDVDATN 192


>gi|148612877 kinesin heavy chain member 2 isoform 1 [Homo sapiens]
          Length = 706

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 3   PPARKEKTKVKESVSRVEK-AKQKSAQQELKQRQRAEIYALN 43
           PP+R++   VKE     EK  K++  QQEL++++  ++ A N
Sbjct: 151 PPSRRKSNCVKEVEKLQEKREKRRLQQQELREKRAQDVDATN 192


>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
           sapiens]
          Length = 750

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 13/54 (24%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 7   KEKTKVKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQ 60
           K++ K++E   ++++ ++K  +QE K R++ E   + +   E   +Q ++ C+Q
Sbjct: 609 KQEEKIREQEEKIQEQEEKIREQEEKIREQEE---MTQEQEEKMGEQEEKMCEQ 659


>gi|157502225 Janus kinase and microtubule interacting protein 3
          [Homo sapiens]
          Length = 844

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%)

Query: 8  EKTKVKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQMQ 62
          E  + K  VS+VE+ K     QEL+Q +  E +    ++TEL+ +  +E  K++Q
Sbjct: 38 ELQQEKSKVSKVEREKN----QELRQVREHEQHKTAVLLTELKTKLHEEKMKELQ 88


>gi|33469974 activating transcription factor 4 [Homo sapiens]
          Length = 351

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 10/71 (14%)

Query: 2   DPPARK---EKTKVKESVSRVEKAKQ-KSAQQELKQRQRAEIYALNRVMTELE------Q 51
           DPP  K    K K ++   +++K +Q K+A    +Q++RAE  AL     ELE      +
Sbjct: 262 DPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALK 321

Query: 52  QQFDEFCKQMQ 62
           ++ D   K++Q
Sbjct: 322 ERADSLAKEIQ 332


>gi|33469976 activating transcription factor 4 [Homo sapiens]
          Length = 351

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 10/71 (14%)

Query: 2   DPPARK---EKTKVKESVSRVEKAKQ-KSAQQELKQRQRAEIYALNRVMTELE------Q 51
           DPP  K    K K ++   +++K +Q K+A    +Q++RAE  AL     ELE      +
Sbjct: 262 DPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALK 321

Query: 52  QQFDEFCKQMQ 62
           ++ D   K++Q
Sbjct: 322 ERADSLAKEIQ 332


>gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens]
          Length = 1220

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 14/59 (23%), Positives = 39/59 (66%), Gaps = 3/59 (5%)

Query: 7   KEKTKVKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMT---ELEQQQFDEFCKQMQ 62
           +++ K +E ++++E+A+Q+  ++E ++++R     L + +    ELE+Q+ +E  K+++
Sbjct: 374 EQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIE 432


>gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens]
          Length = 1721

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 14/59 (23%), Positives = 39/59 (66%), Gaps = 3/59 (5%)

Query: 7   KEKTKVKESVSRVEKAKQKSAQQELKQRQRAEIYALNRVMT---ELEQQQFDEFCKQMQ 62
           +++ K +E ++++E+A+Q+  ++E ++++R     L + +    ELE+Q+ +E  K+++
Sbjct: 374 EQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIE 432


>gi|89363020 nuclear transcription factor, X-box binding-like 1
           [Homo sapiens]
          Length = 911

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 12/31 (38%), Positives = 23/31 (74%)

Query: 11  KVKESVSRVEKAKQKSAQQELKQRQRAEIYA 41
           ++K   S +++A+ K+A +E K+RQ+AE+ A
Sbjct: 829 EMKRKASEIKEAEAKAALEEEKRRQQAELEA 859


>gi|19923879 Josephin domain containing 2 [Homo sapiens]
          Length = 188

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 5/45 (11%)

Query: 24 QKSAQQELKQRQRAEIYALNRVMTELEQQQF-----DEFCKQMQP 63
          Q S      +RQR E+ A++ +   L+QQ F     DE CK++ P
Sbjct: 8  QPSPPTVYHERQRLELCAVHALNNVLQQQLFSQEAADEICKRLAP 52


>gi|41281453 serine/threonine kinase 2 [Homo sapiens]
          Length = 1235

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 5/57 (8%)

Query: 9   KTKVKESVSRVEKAKQKSAQQELKQRQRAEI----YALNRVMTELEQQQFDEFCKQM 61
           K + KE ++ VEKA  K  ++EL +R++ E+    +A  +   + +QQ+ D   K++
Sbjct: 923 KNRKKEVINEVEKA-PKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKKI 978


>gi|45504371 family with sequence similarity 9, member B [Homo
           sapiens]
          Length = 186

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 17/66 (25%), Positives = 42/66 (63%), Gaps = 2/66 (3%)

Query: 2   DPPARKEKTKVKESVSRVE-KAKQKSAQQELKQRQRAEIYALNRVMTELEQQQFDEFCKQ 60
           D  A++++ K+ ++ S+ + K+K    +++LK+++R  I++L +++  LE+   DE  ++
Sbjct: 62  DLTAKRKRMKMDKTCSKTKNKSKHALRKKQLKRQKRDYIHSL-KLLNVLEEYITDEQKEE 120

Query: 61  MQPPGE 66
            +  GE
Sbjct: 121 EEEEGE 126


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.122    0.322 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,551,970
Number of Sequences: 37866
Number of extensions: 70549
Number of successful extensions: 1214
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 950
Number of HSP's gapped (non-prelim): 315
length of query: 66
length of database: 18,247,518
effective HSP length: 39
effective length of query: 27
effective length of database: 16,770,744
effective search space: 452810088
effective search space used: 452810088
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.