Search of human proteins with 40255109

Search of human proteins with 40255109

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|40255109 GrpE-like 2, mitochondrial [Homo sapiens]
         (225 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|40255109 GrpE-like 2, mitochondrial [Homo sapiens]                 452   e-127
gi|24308295 GrpE-like 1, mitochondrial [Homo sapiens]                 179   1e-45
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H...    34   0.088
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo...    33   0.20 
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo...    33   0.20 
gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo sapi...    32   0.34 
gi|190014625 DIS3 mitotic control isoform b [Homo sapiens]             32   0.44 
gi|5032281 dystrophin Dp427c isoform [Homo sapiens]                    31   0.75 
gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens]                   31   0.75 
gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens]                 31   0.75 
gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens]                   31   0.75 
gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]                   31   0.75 
gi|5032285 dystrophin Dp427l isoform [Homo sapiens]                    31   0.75 
gi|5032283 dystrophin Dp427m isoform [Homo sapiens]                    31   0.75 
gi|5803149 coated vesicle membrane protein [Homo sapiens]              31   0.98 
gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens]          31   0.98 
gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]          31   0.98 
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa...    30   1.3  
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s...    30   1.3  
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo...    30   1.3  
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [...    30   1.3  
gi|190014623 DIS3 mitotic control isoform a [Homo sapiens]             30   2.2  
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ...    29   2.8  
gi|239745211 PREDICTED: hypothetical protein XP_002343409 [Homo ...    29   3.7  
gi|158187521 A-kinase anchor protein 5 [Homo sapiens]                  29   3.7  
gi|157426831 hypothetical protein LOC645545 [Homo sapiens]             29   3.7  
gi|24119203 tropomyosin 3 isoform 2 [Homo sapiens]                     28   4.8  
gi|38569484 kinesin family member 21A [Homo sapiens]                   28   4.8  
gi|93102375 hypothetical protein LOC10827 [Homo sapiens]               28   4.8  
gi|149363632 coiled-coil domain containing 29 [Homo sapiens]           28   4.8  

>gi|40255109 GrpE-like 2, mitochondrial [Homo sapiens]
          Length = 225

 Score =  452 bits (1163), Expect = e-127
 Identities = 225/225 (100%), Positives = 225/225 (100%)

Query: 1   MAVRSLWAGRLRVQRLLAWSAAWESKGWPLPFSTATQRTAGEDCRSEDPPDELGPPLAER 60
           MAVRSLWAGRLRVQRLLAWSAAWESKGWPLPFSTATQRTAGEDCRSEDPPDELGPPLAER
Sbjct: 1   MAVRSLWAGRLRVQRLLAWSAAWESKGWPLPFSTATQRTAGEDCRSEDPPDELGPPLAER 60

Query: 61  ALRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADIL 120
           ALRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADIL
Sbjct: 61  ALRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADIL 120

Query: 121 EKTTECISEESEPEDQKLTLEKVFRGLLLLEAKLKSVFAKHGLEKLTPIGDKYDPHEHEL 180
           EKTTECISEESEPEDQKLTLEKVFRGLLLLEAKLKSVFAKHGLEKLTPIGDKYDPHEHEL
Sbjct: 121 EKTTECISEESEPEDQKLTLEKVFRGLLLLEAKLKSVFAKHGLEKLTPIGDKYDPHEHEL 180

Query: 181 ICHVPAGVGVQPGTVALVRQDGYKLHGRTIRLARVEVAVESQRRL 225
           ICHVPAGVGVQPGTVALVRQDGYKLHGRTIRLARVEVAVESQRRL
Sbjct: 181 ICHVPAGVGVQPGTVALVRQDGYKLHGRTIRLARVEVAVESQRRL 225


>gi|24308295 GrpE-like 1, mitochondrial [Homo sapiens]
          Length = 217

 Score =  179 bits (455), Expect = 1e-45
 Identities = 92/196 (46%), Positives = 137/196 (69%), Gaps = 5/196 (2%)

Query: 29  PLPFSTAT-QRTAGEDCRSEDPPDE--LGPPLAERALRVKAVKLEKEVQDLTVRYQRAIA 85
           P    TAT Q+ +G++   +    E    PP  E+ L  + VKLE+++++   +Y+RA+A
Sbjct: 24  PRLLCTATKQKNSGQNLEEDMGQSEQKADPPATEKTLLEEKVKLEEQLKETVEKYKRALA 83

Query: 86  DCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADILEKTTECISEESEPEDQKLTLEKVFR 145
           D EN+R+R+Q+ VE+AK++GIQ+FCKDL+EVAD+LEK T+C+ +E E +D    L+ ++ 
Sbjct: 84  DTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQCVPKE-EIKDDNPHLKNLYE 142

Query: 146 GLLLLEAKLKSVFAKHGLEKLTPIGDKYDPHEHELICHVPAGVGVQPGTVALVRQDGYKL 205
           GL++ E +++ VF KHGL KL P+G K+DP+EHE + H P   G +PGTVALV + GYKL
Sbjct: 143 GLVMTEVQIQKVFTKHGLLKLNPVGAKFDPYEHEALFHTPV-EGKEPGTVALVSKVGYKL 201

Query: 206 HGRTIRLARVEVAVES 221
           HGRT+R A V V  E+
Sbjct: 202 HGRTLRPALVGVVKEA 217


>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
           sapiens]
          Length = 1940

 Score = 34.3 bits (77), Expect = 0.088
 Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 17/121 (14%)

Query: 51  DELGPPLAERA-LRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKI-FGIQS 108
           DEL    A+R  L  K V L +E  DL ++ Q   A+ EN+    +RC +  K  F +++
Sbjct: 862 DELAKSEAKRKELEEKLVTLVQEKNDLQLQVQ---AESENLLDAEERCDQLIKAKFQLEA 918

Query: 109 FCKDLVEVADILEKTT------------ECISEESEPEDQKLTLEKVFRGLLLLEAKLKS 156
             K++ E A+  E+              EC   + + +D +LTL KV +     E K+K+
Sbjct: 919 KIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKN 978

Query: 157 V 157
           +
Sbjct: 979 L 979


>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
           sapiens]
          Length = 1941

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 17/121 (14%)

Query: 51  DELGPPLAERA-LRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVE--------DA 101
           DEL    A+R  L  K V L KE  DL ++ Q   A+ E +    +RC +        +A
Sbjct: 867 DELAKSEAKRKELEEKMVTLLKEKNDLQLQVQ---AEAEGLADAEERCDQLIKTKIQLEA 923

Query: 102 KIFGIQSFCKDLVEV-ADILEKTT----ECISEESEPEDQKLTLEKVFRGLLLLEAKLKS 156
           KI  +    +D  E+ A++  K      EC   + + +D +LTL KV +     E K+K+
Sbjct: 924 KIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKN 983

Query: 157 V 157
           +
Sbjct: 984 L 984


>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
           sapiens]
          Length = 1941

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 17/121 (14%)

Query: 51  DELGPPLAERA-LRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVE--------DA 101
           DEL    A+R  L  K V L KE  DL ++ Q   A+ E +    +RC +        +A
Sbjct: 867 DELAKSEAKRKELEEKMVTLLKEKNDLQLQVQ---AEAEGLADAEERCDQLIKTKIQLEA 923

Query: 102 KIFGIQSFCKDLVEV-ADILEKTT----ECISEESEPEDQKLTLEKVFRGLLLLEAKLKS 156
           KI  +    +D  E+ A++  K      EC   + + +D +LTL KV +     E K+K+
Sbjct: 924 KIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKN 983

Query: 157 V 157
           +
Sbjct: 984 L 984


>gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo
           sapiens]
          Length = 1002

 Score = 32.3 bits (72), Expect = 0.34
 Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 11/110 (10%)

Query: 46  SEDPPDE--LGPPLAERALRVKAVKLEKEVQDLTVRYQRAIADCENI----RRRTQRCVE 99
           +E PP E   GP   E+ L+ +A  L KE++ L  + Q  + D E +    R + +R +E
Sbjct: 447 AEPPPPEPPAGPSEVEQQLQAEAEHLRKELEGLAGQLQAQVQDNEGLSRLNREQEERLLE 506

Query: 100 ---DAKIFGIQSFCKDLVEVADILEKTT--ECISEESEPEDQKLTLEKVF 144
               A+++G Q+  +  +      ++TT    +S+  E ++Q   L+  F
Sbjct: 507 LERAAELWGEQAEARRQILETMQNDRTTISRALSQNRELKEQLAELQSGF 556


>gi|190014625 DIS3 mitotic control isoform b [Homo sapiens]
          Length = 928

 Score = 32.0 bits (71), Expect = 0.44
 Identities = 26/122 (21%), Positives = 54/122 (44%), Gaps = 13/122 (10%)

Query: 19  WSAAWESKGWPLPFSTATQRTAGEDCRSEDPPDELGPPLAERALRVKAVKLEKEVQDLTV 78
           W++   S   P    T  ++  GE+    +          +RA+RV A    + ++ ++ 
Sbjct: 86  WASVASSLRLPGSLETYVEQEQGENANDRN----------DRAIRVAAKWYNEHLKKMSA 135

Query: 79  RYQRAIADCENIRRRTQRCVEDA-KIFGIQSFCKDLVEVADILEKTTECISEE-SEPEDQ 136
             Q  +    N RR  ++ +E+    F  + + K L    +++++   C+SEE +E E  
Sbjct: 136 DNQLQVIFITNDRRNKEKAIEEGIPAFTCEEYVKSLTANPELIDRLA-CLSEEGNEIESG 194

Query: 137 KL 138
           K+
Sbjct: 195 KI 196


>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
          Length = 3677

 Score = 31.2 bits (69), Expect = 0.75
 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 54   GPPLAERALRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDL 113
            G  + +++ +  A  L++++  L +R+Q     C+ +  R +R  E   I  +  F +DL
Sbjct: 2158 GEEIIQQSSKTDASILQEKLGSLNLRWQEV---CKQLSDRKKRLEEQKNI--LSEFQRDL 2212

Query: 114  VEVADILEKTTECISEESEPEDQKLTLEKVFRGLLLLE 151
             E    LE+     S   EP  ++   EK+ +  LL+E
Sbjct: 2213 NEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVE 2250


>gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens]
          Length = 2341

 Score = 31.2 bits (69), Expect = 0.75
 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 54  GPPLAERALRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDL 113
           G  + +++ +  A  L++++  L +R+Q     C+ +  R +R  E   I  +  F +DL
Sbjct: 822 GEEIIQQSSKTDASILQEKLGSLNLRWQEV---CKQLSDRKKRLEEQKNI--LSEFQRDL 876

Query: 114 VEVADILEKTTECISEESEPEDQKLTLEKVFRGLLLLE 151
            E    LE+     S   EP  ++   EK+ +  LL+E
Sbjct: 877 NEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVE 914


>gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens]
          Length = 2344

 Score = 31.2 bits (69), Expect = 0.75
 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 54  GPPLAERALRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDL 113
           G  + +++ +  A  L++++  L +R+Q     C+ +  R +R  E   I  +  F +DL
Sbjct: 825 GEEIIQQSSKTDASILQEKLGSLNLRWQEV---CKQLSDRKKRLEEQKNI--LSEFQRDL 879

Query: 114 VEVADILEKTTECISEESEPEDQKLTLEKVFRGLLLLE 151
            E    LE+     S   EP  ++   EK+ +  LL+E
Sbjct: 880 NEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVE 917


>gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens]
          Length = 3562

 Score = 31.2 bits (69), Expect = 0.75
 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 54   GPPLAERALRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDL 113
            G  + +++ +  A  L++++  L +R+Q     C+ +  R +R  E   I  +  F +DL
Sbjct: 2043 GEEIIQQSSKTDASILQEKLGSLNLRWQEV---CKQLSDRKKRLEEQKNI--LSEFQRDL 2097

Query: 114  VEVADILEKTTECISEESEPEDQKLTLEKVFRGLLLLE 151
             E    LE+     S   EP  ++   EK+ +  LL+E
Sbjct: 2098 NEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVE 2135


>gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]
          Length = 3681

 Score = 31.2 bits (69), Expect = 0.75
 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 54   GPPLAERALRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDL 113
            G  + +++ +  A  L++++  L +R+Q     C+ +  R +R  E   I  +  F +DL
Sbjct: 2162 GEEIIQQSSKTDASILQEKLGSLNLRWQEV---CKQLSDRKKRLEEQKNI--LSEFQRDL 2216

Query: 114  VEVADILEKTTECISEESEPEDQKLTLEKVFRGLLLLE 151
             E    LE+     S   EP  ++   EK+ +  LL+E
Sbjct: 2217 NEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVE 2254


>gi|5032285 dystrophin Dp427l isoform [Homo sapiens]
          Length = 3562

 Score = 31.2 bits (69), Expect = 0.75
 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 54   GPPLAERALRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDL 113
            G  + +++ +  A  L++++  L +R+Q     C+ +  R +R  E   I  +  F +DL
Sbjct: 2043 GEEIIQQSSKTDASILQEKLGSLNLRWQEV---CKQLSDRKKRLEEQKNI--LSEFQRDL 2097

Query: 114  VEVADILEKTTECISEESEPEDQKLTLEKVFRGLLLLE 151
             E    LE+     S   EP  ++   EK+ +  LL+E
Sbjct: 2098 NEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVE 2135


>gi|5032283 dystrophin Dp427m isoform [Homo sapiens]
          Length = 3685

 Score = 31.2 bits (69), Expect = 0.75
 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 54   GPPLAERALRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDL 113
            G  + +++ +  A  L++++  L +R+Q     C+ +  R +R  E   I  +  F +DL
Sbjct: 2166 GEEIIQQSSKTDASILQEKLGSLNLRWQEV---CKQLSDRKKRLEEQKNI--LSEFQRDL 2220

Query: 114  VEVADILEKTTECISEESEPEDQKLTLEKVFRGLLLLE 151
             E    LE+     S   EP  ++   EK+ +  LL+E
Sbjct: 2221 NEFVLWLEEADNIASIPLEPGKEQQLKEKLEQVKLLVE 2258


>gi|5803149 coated vesicle membrane protein [Homo sapiens]
          Length = 201

 Score = 30.8 bits (68), Expect = 0.98
 Identities = 18/51 (35%), Positives = 28/51 (54%)

Query: 41  GEDCRSEDPPDELGPPLAERALRVKAVKLEKEVQDLTVRYQRAIADCENIR 91
           G+D  +E   ++L   + E A+ + AVK E+E  ++  R  RAI D  N R
Sbjct: 118 GQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSR 168


>gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens]
          Length = 1044

 Score = 30.8 bits (68), Expect = 0.98
 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)

Query: 50  PDELGPPLAERALRVKAVKLEK------------EVQDLTVRYQRAIADCENIRRRTQRC 97
           P ELG  ++   +R+K    EK            + +DLT R  +      + + + QR 
Sbjct: 559 PLELGSEVSTSVMRLKLEVEEKKQAMLLLQRALAQQRDLTARRVKETEKALSRQLQRQRE 618

Query: 98  VEDAKIFGIQSFCKDLVEVADILEKTTECISEESEPEDQKLTLEKVFRGLLLLEAKLKSV 157
             +A I    +F   L+E   +L +  E +  E + EDQ+ T E+V +     E ++K +
Sbjct: 619 HYEATIQRHLAFIDQLIEDKKVLSEKCEAVVAELKQEDQRCT-ERVAQAQAQHELEIKKL 677


>gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]
          Length = 1080

 Score = 30.8 bits (68), Expect = 0.98
 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)

Query: 50  PDELGPPLAERALRVKAVKLEK------------EVQDLTVRYQRAIADCENIRRRTQRC 97
           P ELG  ++   +R+K    EK            + +DLT R  +      + + + QR 
Sbjct: 559 PLELGSEVSTSVMRLKLEVEEKKQAMLLLQRALAQQRDLTARRVKETEKALSRQLQRQRE 618

Query: 98  VEDAKIFGIQSFCKDLVEVADILEKTTECISEESEPEDQKLTLEKVFRGLLLLEAKLKSV 157
             +A I    +F   L+E   +L +  E +  E + EDQ+ T E+V +     E ++K +
Sbjct: 619 HYEATIQRHLAFIDQLIEDKKVLSEKCEAVVAELKQEDQRCT-ERVAQAQAQHELEIKKL 677


>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
           sapiens]
          Length = 1843

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 9/77 (11%)

Query: 65  KAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADILEKTT 124
           K +K+EKE Q L+ + +    +    ++  Q C         Q+  KDL++    LEKT 
Sbjct: 492 KILKMEKENQRLSKKVEILENEIVQEKQSLQNC---------QNLSKDLMKEKAQLEKTI 542

Query: 125 ECISEESEPEDQKLTLE 141
           E + E SE + + L  E
Sbjct: 543 ETLRENSERQIKILEQE 559


>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
           sapiens]
          Length = 1870

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 9/77 (11%)

Query: 65  KAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADILEKTT 124
           K +K+EKE Q L+ + +    +    ++  Q C         Q+  KDL++    LEKT 
Sbjct: 492 KILKMEKENQRLSKKVEILENEIVQEKQSLQNC---------QNLSKDLMKEKAQLEKTI 542

Query: 125 ECISEESEPEDQKLTLE 141
           E + E SE + + L  E
Sbjct: 543 ETLRENSERQIKILEQE 559


>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
           sapiens]
          Length = 1939

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 17/125 (13%)

Query: 47  EDPPDELGPPLAERA-LRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVE------ 99
           E   +EL    A+R  L  K V L +E  DL ++ Q   A+ +++    +RC +      
Sbjct: 861 EKTKEELAKTEAKRKELEEKMVTLMQEKNDLQLQVQ---AEADSLADAEERCDQLIKTKI 917

Query: 100 --DAKIFGIQSFCKDLVEV-ADILEKTT----ECISEESEPEDQKLTLEKVFRGLLLLEA 152
             +AKI  +    +D  E+ A++  K      EC   + + +D +LTL KV +     E 
Sbjct: 918 QLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATEN 977

Query: 153 KLKSV 157
           K+K++
Sbjct: 978 KVKNL 982


>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal
           [Homo sapiens]
          Length = 1937

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 11/118 (9%)

Query: 51  DELGPPLAERA-LRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVE-----DAKIF 104
           DEL    A+R  L  K V L KE  DL ++ Q       +   R ++ ++     +AKI 
Sbjct: 864 DELAKSEAKRKELEEKMVTLLKEKNDLQLQVQSEADSLADAEERCEQLIKNKIQLEAKIK 923

Query: 105 GIQSFCKDLVEV-ADILEKTT----ECISEESEPEDQKLTLEKVFRGLLLLEAKLKSV 157
            +    ++  E+ A++  K      EC   + + +D +LTL KV +     E K+K++
Sbjct: 924 EVTERAEEEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNL 981


>gi|190014623 DIS3 mitotic control isoform a [Homo sapiens]
          Length = 958

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 3/82 (3%)

Query: 59  ERALRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVEDA-KIFGIQSFCKDLVEVA 117
           +RA+RV A    + ++ ++   Q  +    N RR  ++ +E+    F  + + K L    
Sbjct: 146 DRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIEEGIPAFTCEEYVKSLTANP 205

Query: 118 DILEKTTECISEE-SEPEDQKL 138
           +++++   C+SEE +E E  K+
Sbjct: 206 ELIDRLA-CLSEEGNEIESGKI 226


>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
           sapiens]
          Length = 1939

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 17/125 (13%)

Query: 47  EDPPDELGPPLAERA-LRVKAVKLEKEVQDLTVRYQR---AIADCEN-----IRRRTQRC 97
           E   +EL    A+R  L  K V L +E  DL ++ Q    A+AD E      I+ + Q  
Sbjct: 861 EKTKEELAKTEAKRKELEEKMVTLMQEKNDLQLQVQAEADALADAEERCDQLIKTKIQL- 919

Query: 98  VEDAKIFGIQSFCKDLVEV-ADILEKTT----ECISEESEPEDQKLTLEKVFRGLLLLEA 152
             +AKI  +    +D  E+ A++  K      EC   + + +D +LTL KV +     E 
Sbjct: 920 --EAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATEN 977

Query: 153 KLKSV 157
           K+K++
Sbjct: 978 KVKNL 982


>gi|239745211 PREDICTED: hypothetical protein XP_002343409 [Homo
            sapiens]
          Length = 1281

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 16/57 (28%), Positives = 28/57 (49%)

Query: 49   PPDELGPPLAERALRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFG 105
            P    GP   E+ L+ +A  L KE+++L  + Q  + + E +    Q   E A++ G
Sbjct: 1132 PEPPAGPSEVEQKLQAEAEHLWKELENLAGQLQAQVEENEGLSHLNQEQEEVAQVVG 1188


>gi|158187521 A-kinase anchor protein 5 [Homo sapiens]
          Length = 427

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/39 (35%), Positives = 26/39 (66%)

Query: 122 KTTECISEESEPEDQKLTLEKVFRGLLLLEAKLKSVFAK 160
           ++TE ++EE++P+D +L+ E  F+   + E K KS  +K
Sbjct: 295 ESTEIVAEETKPKDTELSQESDFKENGITEEKSKSEESK 333


>gi|157426831 hypothetical protein LOC645545 [Homo sapiens]
          Length = 340

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 113 LVEVADILEKTTECISEESEPEDQKLTLEKVFRGLLLLE--AKLKS---VFAKH-GLEKL 166
           L E+ D  ++  + +   +EP   ++  EKVF+GL LL+  AK+ S   +F+++  LE++
Sbjct: 14  LPELFDSSKQLLDEVEGATEPTGSRIVQEKVFKGLDLLDKVAKMLSQLDLFSRNEDLEEI 73

Query: 167 TPIGDKY 173
           T    KY
Sbjct: 74  TSTDLKY 80


>gi|24119203 tropomyosin 3 isoform 2 [Homo sapiens]
          Length = 248

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 26/149 (17%)

Query: 58  AERALRV---KAVKLEK--EVQDLTVRYQRAIAD-----CENIRRRT-------QRCVED 100
           +ER ++V   +A+K E+  E+Q++ ++  + IA+      E + R+        +R  E 
Sbjct: 87  SERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEER 146

Query: 101 AKIFGIQSFCKDLVEVADILEKTTECISEESEPEDQKLTLEKVFRGLL---LLEAKLKSV 157
           A++   +S C+++ E   ++++  +C+S   E   QK    +    +L   L EA+ ++ 
Sbjct: 147 AEL--AESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAE 204

Query: 158 FAKHGLEKL----TPIGDKYDPHEHELIC 182
           FA+  + KL      + DK    + E +C
Sbjct: 205 FAERSVAKLEKTIDDLEDKLKCTKEEHLC 233


>gi|38569484 kinesin family member 21A [Homo sapiens]
          Length = 1661

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 8/70 (11%)

Query: 71  KEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFG--------IQSFCKDLVEVADILEK 122
           KE++DL  +   + A  EN+R+   R    A  F         I S  K+ +E+ D+ +K
Sbjct: 484 KEIEDLRAKLLESEAVNENLRKNLTRATARAPYFSGSSTFSPTILSSDKETIEIIDLAKK 543

Query: 123 TTECISEESE 132
             E +  + +
Sbjct: 544 DLEKLKRKEK 553


>gi|93102375 hypothetical protein LOC10827 [Homo sapiens]
          Length = 505

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 26/139 (18%), Positives = 56/139 (40%), Gaps = 3/139 (2%)

Query: 85  ADCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADILEKTTECISEESEPEDQKLTLEKVF 144
           ++ EN  +  +  +ED   F I+S  +      ++  KT   +    + E   +   +  
Sbjct: 358 SEAENTEQVNKNSIEDIHAFAIRSLAELTACSIELFHKTAALVLHGRKQEVTAIERSQTL 417

Query: 145 RGLLLLEAKLKSVFAKHGLEKLTPIGDKYDPHEHELICHVPAGVGVQPGTVALVRQDGYK 204
             + ++  K  S  +K     LT  G K      +++  +   V ++    A   QD ++
Sbjct: 418 SQMTIVLCKELSSLSKEFTTCLTTAGVK---EMADVLNPLITAVFLEASNSASYIQDAFQ 474

Query: 205 LHGRTIRLARVEVAVESQR 223
           L    + ++ +E  +ES R
Sbjct: 475 LLLPVLEISLIENKIESHR 493


>gi|149363632 coiled-coil domain containing 29 [Homo sapiens]
          Length = 161

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 28/128 (21%), Positives = 59/128 (46%), Gaps = 15/128 (11%)

Query: 43  DCRSEDPPDELGPPLAERALRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVED-A 101
           DC  +   D+L        + +   KL+++  DLT + +   + C N+ +  Q   ++  
Sbjct: 15  DCHGDLKTDQL-------KMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFL 67

Query: 102 KIFGIQSFCKDLVEVADILEKTTECISEESEPEDQKLTLEKVFRGLLLLEAKLKSVFAKH 161
            +  +Q  C+ L E   +L++  E ++ ++  E+ ++ + K+    L L+ K     A  
Sbjct: 68  SMKKVQQQCEKLEEDKKMLKE--EILNLKTHMENNRVEISKLQEYKLELDEK-----AMQ 120

Query: 162 GLEKLTPI 169
            +EKL  I
Sbjct: 121 AVEKLEEI 128


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,725,711
Number of Sequences: 37866
Number of extensions: 379487
Number of successful extensions: 1271
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1254
Number of HSP's gapped (non-prelim): 52
length of query: 225
length of database: 18,247,518
effective HSP length: 99
effective length of query: 126
effective length of database: 14,498,784
effective search space: 1826846784
effective search space used: 1826846784
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.