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Search of human proteins with 40217794
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40217794 hypothetical protein LOC151050 [Homo sapiens]
(987 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40217794 hypothetical protein LOC151050 [Homo sapiens] 1986 0.0
gi|32698714 hypothetical protein LOC284058 [Homo sapiens] 234 2e-61
gi|239740946 PREDICTED: hypothetical protein XP_002344104 isofor... 47 7e-05
gi|239740944 PREDICTED: hypothetical protein XP_002344105 isofor... 47 7e-05
gi|239740942 PREDICTED: hypothetical protein XP_002344106 isofor... 47 7e-05
gi|149944433 hampin [Homo sapiens] 39 0.018
gi|55770834 centromere protein F [Homo sapiens] 37 0.091
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 36 0.20
gi|4502443 dystonin isoform 1e precursor [Homo sapiens] 35 0.27
gi|124028519 hypothetical protein LOC158401 isoform 2 [Homo sapi... 35 0.45
gi|124028515 hypothetical protein LOC158401 isoform 1 [Homo sapi... 35 0.45
gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens] 34 0.59
gi|194733753 phosphoinositide-binding protein PIP3-E isoform 1 [... 34 0.59
gi|194733747 phosphoinositide-binding protein PIP3-E isoform 1 [... 34 0.59
gi|40354212 phosphoinositide-binding protein PIP3-E isoform 2 [H... 34 0.59
gi|210147567 hypothetical protein LOC220081 [Homo sapiens] 34 0.59
gi|109715837 hypothetical protein LOC79625 [Homo sapiens] 34 0.59
gi|22749217 coiled-coil domain containing 63 [Homo sapiens] 34 0.77
gi|189491742 ataxin 7 isoform b [Homo sapiens] 33 1.0
gi|4506797 ataxin 7 isoform a [Homo sapiens] 33 1.0
gi|17978469 cyclin T2 isoform b [Homo sapiens] 33 1.0
gi|110611218 ribosome binding protein 1 [Homo sapiens] 33 1.7
gi|110611220 ribosome binding protein 1 [Homo sapiens] 33 1.7
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 33 1.7
gi|56550043 sarcolemma associated protein [Homo sapiens] 33 1.7
gi|93102405 hypothetical protein LOC84182 [Homo sapiens] 32 2.9
gi|44917604 SLIT-ROBO Rho GTPase activating protein 1 [Homo sapi... 32 3.8
gi|21450785 suppressor of cytokine signaling 6 [Homo sapiens] 32 3.8
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 31 5.0
gi|237681069 spatacsin isoform 2 [Homo sapiens] 31 5.0
>gi|40217794 hypothetical protein LOC151050 [Homo sapiens]
Length = 987
Score = 1986 bits (5145), Expect = 0.0
Identities = 987/987 (100%), Positives = 987/987 (100%)
Query: 1 MTPALREATAKGISFSSLPSTMESDKMLYMESPRTVDEKLKGDTFSQMLGFPTPEPTLNT 60
MTPALREATAKGISFSSLPSTMESDKMLYMESPRTVDEKLKGDTFSQMLGFPTPEPTLNT
Sbjct: 1 MTPALREATAKGISFSSLPSTMESDKMLYMESPRTVDEKLKGDTFSQMLGFPTPEPTLNT 60
Query: 61 NFVNLKHFGSPQSSKHYQTVFLMRSNSTLNKHNENYKQKKLGEPSCNKLKNILYNGSNIQ 120
NFVNLKHFGSPQSSKHYQTVFLMRSNSTLNKHNENYKQKKLGEPSCNKLKNILYNGSNIQ
Sbjct: 61 NFVNLKHFGSPQSSKHYQTVFLMRSNSTLNKHNENYKQKKLGEPSCNKLKNILYNGSNIQ 120
Query: 121 LSKICLSHSEEFIKKEPLSDTTSQCMKDVQIILDSNITKDTNVDKVQLQNCKWYQENALL 180
LSKICLSHSEEFIKKEPLSDTTSQCMKDVQIILDSNITKDTNVDKVQLQNCKWYQENALL
Sbjct: 121 LSKICLSHSEEFIKKEPLSDTTSQCMKDVQIILDSNITKDTNVDKVQLQNCKWYQENALL 180
Query: 181 DKVTDAEIKKGLLHCTQKKIVPGHSNVPVSSSAAEKEEEVHARLLHCVSKQKILLSQARR 240
DKVTDAEIKKGLLHCTQKKIVPGHSNVPVSSSAAEKEEEVHARLLHCVSKQKILLSQARR
Sbjct: 181 DKVTDAEIKKGLLHCTQKKIVPGHSNVPVSSSAAEKEEEVHARLLHCVSKQKILLSQARR 240
Query: 241 TQKHLQMLLAKHVVKHYGQQMKLSMKHQLPKMKTFHEPTTILGNSLPKCTEIKPEVNTLT 300
TQKHLQMLLAKHVVKHYGQQMKLSMKHQLPKMKTFHEPTTILGNSLPKCTEIKPEVNTLT
Sbjct: 241 TQKHLQMLLAKHVVKHYGQQMKLSMKHQLPKMKTFHEPTTILGNSLPKCTEIKPEVNTLT 300
Query: 301 AENKLWDDAKNGFARCTAAEIQRFAFSATGLLSHVEEGLDSDATDSSSDDDLDEYTLRKN 360
AENKLWDDAKNGFARCTAAEIQRFAFSATGLLSHVEEGLDSDATDSSSDDDLDEYTLRKN
Sbjct: 301 AENKLWDDAKNGFARCTAAEIQRFAFSATGLLSHVEEGLDSDATDSSSDDDLDEYTLRKN 360
Query: 361 VAVNCSTEWKWLVDRARVGSRWTWLQAQISDLECKIQQLTDIHRQIRASKGIVVLEECQL 420
VAVNCSTEWKWLVDRARVGSRWTWLQAQISDLECKIQQLTDIHRQIRASKGIVVLEECQL
Sbjct: 361 VAVNCSTEWKWLVDRARVGSRWTWLQAQISDLECKIQQLTDIHRQIRASKGIVVLEECQL 420
Query: 421 PKDILKKQMQFADQAASLNILGNPQVPQECQDPVPEQDFEMSPSSPTLLLRNIEKQSAQL 480
PKDILKKQMQFADQAASLNILGNPQVPQECQDPVPEQDFEMSPSSPTLLLRNIEKQSAQL
Sbjct: 421 PKDILKKQMQFADQAASLNILGNPQVPQECQDPVPEQDFEMSPSSPTLLLRNIEKQSAQL 480
Query: 481 TEIINSLIAPLNLSPTSSPLSSKSCSHKCLANGIYRSASENLDELSSSSSWLLNQKHSKK 540
TEIINSLIAPLNLSPTSSPLSSKSCSHKCLANGIYRSASENLDELSSSSSWLLNQKHSKK
Sbjct: 481 TEIINSLIAPLNLSPTSSPLSSKSCSHKCLANGIYRSASENLDELSSSSSWLLNQKHSKK 540
Query: 541 KRKDRTRLKSSSLTFMSTSARTRPLQSFHKRKLYRLSPTFYWTPQTLPSKETAFLNTTQM 600
KRKDRTRLKSSSLTFMSTSARTRPLQSFHKRKLYRLSPTFYWTPQTLPSKETAFLNTTQM
Sbjct: 541 KRKDRTRLKSSSLTFMSTSARTRPLQSFHKRKLYRLSPTFYWTPQTLPSKETAFLNTTQM 600
Query: 601 PCLQSASTWSSYEHNSESYLLREHVSELDSSFHSVLSLPSDVPLHFHFETLLKKTEIKGN 660
PCLQSASTWSSYEHNSESYLLREHVSELDSSFHSVLSLPSDVPLHFHFETLLKKTEIKGN
Sbjct: 601 PCLQSASTWSSYEHNSESYLLREHVSELDSSFHSVLSLPSDVPLHFHFETLLKKTEIKGN 660
Query: 661 LAENKFVDEYIISPSPVHSTLNQWRNGYSPICKPQIRSESSAQLLQGRKKRHLSETALGE 720
LAENKFVDEYIISPSPVHSTLNQWRNGYSPICKPQIRSESSAQLLQGRKKRHLSETALGE
Sbjct: 661 LAENKFVDEYIISPSPVHSTLNQWRNGYSPICKPQIRSESSAQLLQGRKKRHLSETALGE 720
Query: 721 RTKLEESDFQHTESGSHSNFTAVSNVNVLSRIQNSSRNTARRRLRSESSYDIDNIVIPMS 780
RTKLEESDFQHTESGSHSNFTAVSNVNVLSRIQNSSRNTARRRLRSESSYDIDNIVIPMS
Sbjct: 721 RTKLEESDFQHTESGSHSNFTAVSNVNVLSRIQNSSRNTARRRLRSESSYDIDNIVIPMS 780
Query: 781 LVAPAKLEKLQYKEILTPSWRMVVLQPLDEYNLGKEEIEDLSDEVFSLRHKKYEEREQAR 840
LVAPAKLEKLQYKEILTPSWRMVVLQPLDEYNLGKEEIEDLSDEVFSLRHKKYEEREQAR
Sbjct: 781 LVAPAKLEKLQYKEILTPSWRMVVLQPLDEYNLGKEEIEDLSDEVFSLRHKKYEEREQAR 840
Query: 841 WSLWEQSKWHRRNSRAYSKNVEGQDLLLKEYPNNFSSSQQCAAASPPGLPSENQDLCAYG 900
WSLWEQSKWHRRNSRAYSKNVEGQDLLLKEYPNNFSSSQQCAAASPPGLPSENQDLCAYG
Sbjct: 841 WSLWEQSKWHRRNSRAYSKNVEGQDLLLKEYPNNFSSSQQCAAASPPGLPSENQDLCAYG 900
Query: 901 LPSLNQSQETKSLWWERRAFPLKGEDMAALLCQDEKKDQVERSSTAFHGEIFGTSVPENG 960
LPSLNQSQETKSLWWERRAFPLKGEDMAALLCQDEKKDQVERSSTAFHGEIFGTSVPENG
Sbjct: 901 LPSLNQSQETKSLWWERRAFPLKGEDMAALLCQDEKKDQVERSSTAFHGEIFGTSVPENG 960
Query: 961 HHPKKQSDGMEEYKTFGLGLTNVKKNR 987
HHPKKQSDGMEEYKTFGLGLTNVKKNR
Sbjct: 961 HHPKKQSDGMEEYKTFGLGLTNVKKNR 987
>gi|32698714 hypothetical protein LOC284058 [Homo sapiens]
Length = 1105
Score = 234 bits (598), Expect = 2e-61
Identities = 243/838 (28%), Positives = 360/838 (42%), Gaps = 175/838 (20%)
Query: 223 RLLHCVSKQKILLSQARRTQKHLQMLLAKHVVKHYGQQMKLSMKH---QLPKMKTFHEPT 279
R+ + +Q + S+ARR QK LQ++ AK V +H Q+ ++ +LP +++ +
Sbjct: 283 RITALLRRQADIESRARRLQKRLQVVQAKQVERHIQHQLGGFLEKTLSKLPNLESLRPRS 342
Query: 280 TILGNSLPKCTEIKPEVNTLTAENKLWDDAKNGFARCTAAEIQRFAFSATGLLSHVEEGL 339
++ + K T T+E N + E++RF S L E+
Sbjct: 343 QLMLTRKAEAALRKAASETTTSEGLSNFLKSNSISE----ELERFTASGIANLRCSEQAF 398
Query: 340 DSDATDSSS--DDDLDEYTL------RKNVAVNCSTEWKWLVDRARVGSRWTWLQAQISD 391
DSD TDSSS + D++E L +++V + +EWKW DRA + SRW WLQA +SD
Sbjct: 399 DSDVTDSSSGGESDIEEEELTRADPEQRHVPLRRRSEWKWAADRAAIVSRWNWLQAHVSD 458
Query: 392 LECKIQQLTDIHRQIRASKGIVVLEECQLPKDILKKQMQFADQAASLNILGNPQVPQECQ 451
LE +I+Q TDI++QIRA+KG++VL E
Sbjct: 459 LEYRIRQQTDIYKQIRANKGLIVLGEV--------------------------------- 485
Query: 452 DPVPEQ--DFEMSPSSPTLLLRNIEKQSAQLTEIINSLIAPLNLSPTSSPLSSKSCSHKC 509
P PE D + SS +K +++ + + AP+ + S LS+KSC
Sbjct: 486 -PPPEHTTDLFLPLSSEVKTDHGTDKLIESVSQPLENHGAPI-IGHISESLSTKSCGALR 543
Query: 510 LANGIYRSASENL-DELSSSSSWLLNQKHSKKKRKDRTRLKSSSLTFMSTSARTRPLQSF 568
NG+ + L D + SS Q H +K R L SSS +ARTRP+ S
Sbjct: 544 PVNGVINTLQPVLADHIPGDSSDAEEQLH----KKQRLNLVSSSSDGTCVAARTRPVLSC 599
Query: 569 HKRKLYRLSPTFYWTPQTLPSKETAFLNTTQMP----------CLQSASTWSSYEHNSES 618
KR+L R + +P + N+T P C + E + E+
Sbjct: 600 KKRRLVRPN-------SIVPLSKKVHRNSTIRPGCDVNPSCALCGSGSINTMPPEIHYEA 652
Query: 619 YLLREHVSELDSSFHSVLSLPSDVPLHFHFETLLK---------------------KTEI 657
LL E +S+LDS H VL+ P DVP HF+++LK + +
Sbjct: 653 PLL-ERLSQLDSCVHPVLAFPDDVPTSLHFQSMLKSQWQNKPFDKIKPPKKLSLKHRAPM 711
Query: 658 KGNLAE------NKFVDEYIISPSPVHSTLNQWRN--------GYSPICKPQIRSESSAQ 703
G+L + +K V ++ + H R G P+ + ++ + + +
Sbjct: 712 PGSLPDSARKDRHKLVSSFLTTAKLSHHQTRPDRTHRQHLDDVGAVPMVE-RVTAPKAER 770
Query: 704 LLQGRKKRH---LSETALGERTKLEESDFQHTESGSHSNFTAVSN--------------- 745
LL H S+ L + + +H S S++ A ++
Sbjct: 771 LLNPPPPVHDPNHSKMRLRDHSSERSEVLKHHTDMSSSSYLAATHHPPHSPLVRQLSTSS 830
Query: 746 -----VNVLSRIQNSSRNTARRRLRSESSYDIDNIVIPMSLVAPAKLEKLQYKEILTPSW 800
+ S++ S+ RR R ESS+DI+NIVIPMS+ A ++EKLQYKEILTPSW
Sbjct: 831 DSPAPASSSSQVTASTSQQPVRRRRGESSFDINNIVIPMSVAATTRVEKLQYKEILTPSW 890
Query: 801 RMVVLQPL----DEYNLGKEEIEDLSDEVFSLRHKKYEEREQARWSLWEQS-KWHRRNSR 855
R V LQ L DE N EEIEDLSD F+ H K EE E+ARW LW S RR SR
Sbjct: 891 REVDLQSLKGSPDEEN---EEIEDLSDAAFAALHAKCEEMERARW-LWTTSVPPQRRGSR 946
Query: 856 AY------------SKNVEGQDLLLKEYPNNFSSSQQCAAASP-----PGLPSENQDLCA 898
+Y S N + ++ S S+ SP P L S A
Sbjct: 947 SYRSSDGRTTPQLGSANPSTPQPASPDVSSSHSLSEYSHGQSPRSPISPELHSAPLTPVA 1006
Query: 899 YGLPSLNQSQETKSLW------------WERRAFPLKGEDMAALLCQDEKKDQVERSS 944
P S++T+ WERR FPL A C+D+ D ER++
Sbjct: 1007 RDTPRHLASEDTRCSTPELGLDEQSVQPWERRTFPLAHSPQAE--CEDQ-LDAQERAA 1061
>gi|239740946 PREDICTED: hypothetical protein XP_002344104 isoform 1
[Homo sapiens]
Length = 430
Score = 47.4 bits (111), Expect = 7e-05
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Query: 223 RLLHCVSKQKILLSQARRTQKHLQMLLAKHVVKHYGQQMKLSMKH---QLPKMKTFHEPT 279
R+ + +Q + S+ARR QK LQ++ AK V +H Q+ ++ +LP +++ +
Sbjct: 283 RITALLRRQADIESRARRLQKRLQVVQAKQVERHIQHQLGGFLEKTLSKLPNLESLRPRS 342
Query: 280 TILGNSLPKCTEIKPEVNTLTAENKLWDDAKNGFARCTAAEIQRFAFSATGLLSHVEEGL 339
++ + K T T+E N + E++RF S L E+
Sbjct: 343 QLMLTRKAEAALRKAASETTTSEGLSNFLKSNSISE----ELERFTASGIANLRCSEQAF 398
Query: 340 DSDATDSSS--DDDLDEYTLRK 359
DSD TDSSS + D++E L +
Sbjct: 399 DSDVTDSSSGGESDIEEEELTR 420
>gi|239740944 PREDICTED: hypothetical protein XP_002344105 isoform 2
[Homo sapiens]
Length = 430
Score = 47.4 bits (111), Expect = 7e-05
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Query: 223 RLLHCVSKQKILLSQARRTQKHLQMLLAKHVVKHYGQQMKLSMKH---QLPKMKTFHEPT 279
R+ + +Q + S+ARR QK LQ++ AK V +H Q+ ++ +LP +++ +
Sbjct: 283 RITALLRRQADIESRARRLQKRLQVVQAKQVERHIQHQLGGFLEKTLSKLPNLESLRPRS 342
Query: 280 TILGNSLPKCTEIKPEVNTLTAENKLWDDAKNGFARCTAAEIQRFAFSATGLLSHVEEGL 339
++ + K T T+E N + E++RF S L E+
Sbjct: 343 QLMLTRKAEAALRKAASETTTSEGLSNFLKSNSISE----ELERFTASGIANLRCSEQAF 398
Query: 340 DSDATDSSS--DDDLDEYTLRK 359
DSD TDSSS + D++E L +
Sbjct: 399 DSDVTDSSSGGESDIEEEELTR 420
>gi|239740942 PREDICTED: hypothetical protein XP_002344106 isoform 3
[Homo sapiens]
Length = 430
Score = 47.4 bits (111), Expect = 7e-05
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Query: 223 RLLHCVSKQKILLSQARRTQKHLQMLLAKHVVKHYGQQMKLSMKH---QLPKMKTFHEPT 279
R+ + +Q + S+ARR QK LQ++ AK V +H Q+ ++ +LP +++ +
Sbjct: 283 RITALLRRQADIESRARRLQKRLQVVQAKQVERHIQHQLGGFLEKTLSKLPNLESLRPRS 342
Query: 280 TILGNSLPKCTEIKPEVNTLTAENKLWDDAKNGFARCTAAEIQRFAFSATGLLSHVEEGL 339
++ + K T T+E N + E++RF S L E+
Sbjct: 343 QLMLTRKAEAALRKAASETTTSEGLSNFLKSNSISE----ELERFTASGIANLRCSEQAF 398
Query: 340 DSDATDSSS--DDDLDEYTLRK 359
DSD TDSSS + D++E L +
Sbjct: 399 DSDVTDSSSGGESDIEEEELTR 420
>gi|149944433 hampin [Homo sapiens]
Length = 351
Score = 39.3 bits (90), Expect = 0.018
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 795 ILTPSWRMVVLQPLDEYNLGKEEIEDLSDEVFSLRHKKYE--EREQARWSLW---EQSKW 849
+ PSWR ++PL + N + +E+L D VFS RH K E E+ + RW + EQ
Sbjct: 210 LAVPSWRDHSVEPLRDPN-PSDLLENLDDSVFSKRHAKLELDEKRRKRWDIQRIREQRIL 268
Query: 850 HRRNSRAYSK 859
R R Y K
Sbjct: 269 QRLQLRMYKK 278
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 37.0 bits (84), Expect = 0.091
Identities = 111/559 (19%), Positives = 199/559 (35%), Gaps = 93/559 (16%)
Query: 124 ICLSHSEEFIKKEPLSDTTSQCMKDVQIILDSNITKDTNVDKVQ-LQNCKWYQENALLDK 182
I H+ E ++ P D C KD Q L+ +I K T V+ C Q +
Sbjct: 1673 ISKEHTSETTERTPKHDVHQICDKDAQQDLNLDIEKITETGAVKPTGECSGEQSPDTNYE 1732
Query: 183 VTDAEIKKGLLHCTQKKIVPGHSNVPVSSSAAEKEEEVHARLLHCVSKQKILLSQARRTQ 242
+ +G C + G N V +E++H + L +
Sbjct: 1733 PPGEDKTQGSSECISELSFSG-PNALVPMDFLGNQEDIH----------NLQLRVKETSN 1781
Query: 243 KHLQMLLAKHVVKHYGQQMKLSMKHQLPKMKTFHEPTTILGNSLPKCTEIKPEVNTLTAE 302
++L++L HV++ ++++ + H L + C E++ V L E
Sbjct: 1782 ENLRLL---HVIEDRDRKVESLLNEMKELDSKLHLQEVQLMTKIEACIELEKIVGELKKE 1838
Query: 303 NKLWDDAKNGFARCTAAEIQRFAFSATGLLSHVE--EGLDSDA---TDSSSDDDLDEYTL 357
N + +++ F+ LL VE EGL+SD D SS +D+ +
Sbjct: 1839 NS-----------DLSEKLEYFSCDHQELLQRVETSEGLNSDLEMHADKSSREDIGD--- 1884
Query: 358 RKNVAVNCSTEWKWLVDRARVGSRWTWLQAQISDLECKIQQLTDIHRQIRASKGIVVLEE 417
NVA + WK R+ ++ ++S + + + + A +V E+
Sbjct: 1885 --NVA-KVNDSWK---------ERFLDVENELSRIRSEKASIEHEALYLEADLEVVQTEK 1932
Query: 418 CQLPKDILKKQMQFADQAASLNILGNPQVPQECQDPVPEQDFEMSPSSPTLLLRNIEKQS 477
L KD KQ L++ V E E D + S T L + ++
Sbjct: 1933 LCLEKDNENKQKVIVCLEEELSV-----VTSERNQLRGELD---TMSKKTTALDQLSEKM 1984
Query: 478 AQLTEIINSLIAPLNLSPTSSPLSSKSCSHKCL--ANGIYRSASENLDELSSSSSWLLNQ 535
+ T+ + S C H C+ A + +E L LSS S LL
Sbjct: 1985 KEKTQELES--------------HQSECLH-CIQVAEAEVKEKTELLQTLSSDVSELLKD 2029
Query: 536 KHSKKKRKDRTRLKSSSLTFMSTSARTRPLQSFHKRKLY---------RLSPTFYWTPQT 586
K +++ S +L+ + Q +++L RLS + Y
Sbjct: 2030 KTHLQEKLQSLEKDSQALSLTKCELENQIAQLNKEKELLVKESESLQARLSESDYEKLNV 2089
Query: 587 LPSKETAFLNTTQMPCLQSASTWSSYEHNSESYLLREHVSELDSSFHSVLSLPSDVPLHF 646
+ E A + + L+ +ST E + LR + +L + + +D
Sbjct: 2090 SKALEAALVEKGEF-ALRLSST------QEEVHQLRRGIEKLR------VRIEADEKKQL 2136
Query: 647 HFETLLKKTEIKGNLAENK 665
H LK+ E + + ++K
Sbjct: 2137 HIAEKLKERERENDSLKDK 2155
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 35.8 bits (81), Expect = 0.20
Identities = 153/757 (20%), Positives = 295/757 (38%), Gaps = 130/757 (17%)
Query: 108 KLKNILYNGSNIQLSKICLSHSEEFIKKEPLSDTTSQCMKDVQIILDSNITKDTNVDKVQ 167
K+K +L + + K S EEF + + + + K+++ + V +Q
Sbjct: 835 KIKPLL---KSAEREKEMASMKEEFTRLKEALEKSEARRKELE---------EKMVSLLQ 882
Query: 168 LQNCKWYQENALLDKVTDAEIKKGLLHCTQ--KKIVPGHSNVPVSSSAAEKEEEVHARLL 225
+N Q A D + DAE + C Q K + + V + E EEE++A L
Sbjct: 883 EKNDLQLQVQAEQDNLADAEER-----CDQLIKNKIQLEAKVKEMNERLEDEEEMNAELT 937
Query: 226 HCVSKQKILLSQARRTQKHLQMLLAK-HVVKHYGQQMKLSMKHQLPKMKTFHEPTTILGN 284
K + S+ +R L++ LAK KH + ++ ++ + T
Sbjct: 938 AKKRKLEDECSELKRDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKK 997
Query: 285 SLPKCTE--------IKPEVNTLT-AENKL---WDDAKNGF--ARCTAAEIQRFAFSATG 330
+L + + + +VNTLT A+ KL DD + + +++R G
Sbjct: 998 ALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEG 1057
Query: 331 LLSHVEEGLDSDATDSSSDDDLDEYTLRKNVAVNCSTEWKWLVDRARVGSRWTWLQAQIS 390
L +E + D LDE +K+ +N + D +GS+ LQ ++
Sbjct: 1058 DLKLTQESIMDLENDK---QQLDERLKKKDFELNALN--ARIEDEQALGSQ---LQKKLK 1109
Query: 391 DLECKIQQLTDIHRQIRASKGIVVLEECQLPKDI--LKKQMQFADQAASLNILGNPQVPQ 448
+L+ +I++L + R ++ V L +++ + ++++ A A S+ I N + +
Sbjct: 1110 ELQARIEELEEELEAERTARAKVEKLRSDLSRELEEISERLEEAGGATSVQIEMNKK--R 1167
Query: 449 ECQDPVPEQDFEMSPSSPTLLLRNIEKQSAQLTEIINSLIAPLNLSPTSSPLSSKSCSHK 508
E + +D E + + K+ A + I NL L + K
Sbjct: 1168 EAEFQKMRRDLEEATLQHEATAAALRKKHADSVAELGEQID--NLQRVKQKLEKEKSEFK 1225
Query: 509 CLANGIYRS------ASENLDELSSSSSWLLNQKHSKKKRKDRTRLKSSSLTFMSTSART 562
+ + + A NL+++ + L +Q + + + + T+ + LT +T
Sbjct: 1226 LELDDVTSNMEQIIKAKANLEKMCRT---LEDQMNEHRSKAEETQRSVNDLTSQRAKLQT 1282
Query: 563 RPLQSFHKRKLYRLSPTFYWTPQTLPSKETAFLNTTQMPCLQSASTWSSYEHNSESYLLR 622
+ + L KE T + T++ + + L
Sbjct: 1283 ENGE----------------LSRQLDEKEALISQLT-----RGKLTYTQQLEDLKRQ-LE 1320
Query: 623 EHVSELDSSFHSVLSLPSDVPLHFHFETLLKKTEIKGNLAENKFVDEYIISPSPVHSTLN 682
E V ++ H++ S D L E ++TE K L + ++S + +S +
Sbjct: 1321 EEVKAKNALAHALQSARHDCDL--LREQYEEETEAKAEL-------QRVLSKA--NSEVA 1369
Query: 683 QWRNGYSPICKPQIRSESSAQLLQGRKKRHLSETALGERTKLEESDFQHTESGSHSNFTA 742
QWR Y + + +L + +KK L +R L+E++ A
Sbjct: 1370 QWRTKYETDA-----IQRTEELEEAKKK-------LAQR--LQEAE------------EA 1403
Query: 743 VSNVNVLSRIQNSSRNTARRRLRSESSYDIDNIVIPM--SLVAPAKLEKLQ--YKEILTP 798
V VN + SS + RL++E I+++++ + S A A L+K Q + +IL
Sbjct: 1404 VEAVNA----KCSSLEKTKHRLQNE----IEDLMVDVERSNAAAAALDKKQRNFDKILA- 1454
Query: 799 SWRMVVLQPLDEYNLGKEEIEDLSDEVFSLRHKKYEE 835
W+ + E ++E LS E+F L++ YEE
Sbjct: 1455 EWKQKYEESQSELESSQKEARSLSTELFKLKN-AYEE 1490
>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
Length = 2649
Score = 35.4 bits (80), Expect = 0.27
Identities = 50/246 (20%), Positives = 101/246 (41%), Gaps = 13/246 (5%)
Query: 308 DAKNGFARCTAAEIQRFAFSATGLLSHVEE-GLDSDATDSSSDDDLDEYTLRKNVAVNCS 366
D N RC E++R + G + E G + T +++ + E + K + N
Sbjct: 1411 DETNNTLRCLKLELERKDQAEKGYSQQLRELGRQLNQTTGKAEEAMQEASDLKKIKRNYQ 1470
Query: 367 TEWKWLV-DRARVGSRWTWLQAQISDLECKIQQLTDIHRQIRASKGIVVLEECQLPKDIL 425
E + L ++ ++ + + E IQ L R K + L+ CQ D L
Sbjct: 1471 LELESLNHEKGKLQREVDRITRAHAVAEKNIQHLNSQIHSFRDEKELERLQICQRKSDHL 1530
Query: 426 KKQMQFADQAASLNILGNPQVPQECQDPVP--EQDFEMSPSSPTLLLRNIEKQSAQLTEI 483
K+Q + + + +L N + +E D + ++ E S +L + +E+ + Q E
Sbjct: 1531 KEQFEKSHE----QLLQNIKAEKENNDKIQRLNEELEKSNECAEMLKQKVEELTRQNNE- 1585
Query: 484 INSLIAPLNLSPTSSPLSSKSCSHKCLANGIYRSASENLDELSSSSSWLLNQKHSKKKRK 543
++ + + L ++ +C A I A D+L S++ L K +K ++
Sbjct: 1586 TKLMMQRIQAESENIVLEKQTIQQRCEALKI--QADGFKDQLRSTNEHL--HKQTKTEQD 1641
Query: 544 DRTRLK 549
+ ++K
Sbjct: 1642 FQRKIK 1647
>gi|124028519 hypothetical protein LOC158401 isoform 2 [Homo sapiens]
Length = 1405
Score = 34.7 bits (78), Expect = 0.45
Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 21/157 (13%)
Query: 819 EDLSDEVFSLRHKKYEEREQARWSLWEQSKWHRRNSRAYSKNVEGQDLLLKEYPNNFSSS 878
+D+SD +FSL + + ++WEQ H N + Y + L + N F+
Sbjct: 1237 KDVSDPIFSLEGTQSPLHWNFKKNIWEQEN-HPFNLQ-YGAQQTACNKLYSQKGNLFTDQ 1294
Query: 879 QQCAAASPPGLPSENQDLCAYGLPSLNQSQETKSLWWERRAFPLKGEDMAALLCQDEKKD 938
Q+C + GL E S + ++ W E + P + D +
Sbjct: 1295 QKCLSDESEGLTCE--------------SSKDETFWRELPSVP----SLDLFRASDSNAN 1336
Query: 939 QVERSSTAFHGEIFGTSVPENGHHPKKQSDGMEEYKT 975
Q E +S F+ + G S+ + HH + G +E T
Sbjct: 1337 QKEFNSLYFY-QRAGKSLGQKRHHESSFNSGDKESLT 1372
>gi|124028515 hypothetical protein LOC158401 isoform 1 [Homo sapiens]
Length = 1444
Score = 34.7 bits (78), Expect = 0.45
Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 21/157 (13%)
Query: 819 EDLSDEVFSLRHKKYEEREQARWSLWEQSKWHRRNSRAYSKNVEGQDLLLKEYPNNFSSS 878
+D+SD +FSL + + ++WEQ H N + Y + L + N F+
Sbjct: 1276 KDVSDPIFSLEGTQSPLHWNFKKNIWEQEN-HPFNLQ-YGAQQTACNKLYSQKGNLFTDQ 1333
Query: 879 QQCAAASPPGLPSENQDLCAYGLPSLNQSQETKSLWWERRAFPLKGEDMAALLCQDEKKD 938
Q+C + GL E S + ++ W E + P + D +
Sbjct: 1334 QKCLSDESEGLTCE--------------SSKDETFWRELPSVP----SLDLFRASDSNAN 1375
Query: 939 QVERSSTAFHGEIFGTSVPENGHHPKKQSDGMEEYKT 975
Q E +S F+ + G S+ + HH + G +E T
Sbjct: 1376 QKEFNSLYFY-QRAGKSLGQKRHHESSFNSGDKESLT 1411
>gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens]
Length = 1486
Score = 34.3 bits (77), Expect = 0.59
Identities = 52/236 (22%), Positives = 88/236 (37%), Gaps = 28/236 (11%)
Query: 463 PSSPTLLLRNIEKQSAQLTEIINSLIAPLNLSPTSSPLSSKSCSHKCLANGIYRS---AS 519
P+SPT + + + A T + +L +L PTSS L + + + N + + +S
Sbjct: 337 PTSPTSTVTDSTTKIAYSTSMTGTLSTETSLPPTSSSLPTTETATTPMTNLVTTTTEISS 396
Query: 520 ENLDELSSSSSWLLNQKHSKKKRKD---RTRLKSSSLTFMSTSARTRPLQSFHKRKLYRL 576
+ SSS+ + HS + T S S ++S S L
Sbjct: 397 HSTPSFSSSTIYSTVTSHSTPRFTSSITTTETPSHSTPRFTSSFTNTKTTSHRSPSFTSL 456
Query: 577 SPTFYWTPQTLPSKETAFLNTTQMPC------LQSASTWSSYEHNSESYLLREHVSELDS 630
T T + PS T+ + TT+ S +T + HN+ S+ ++ ++
Sbjct: 457 ITTTETTSHSTPS-FTSSITTTETTSHSARSFTSSITTTETTSHNTRSF--TSSITTTET 513
Query: 631 SFHSVLSLPSDVPLHFHFETLLKKTEIKGNLAENKFVDEYIISPSPVHST--LNQW 684
+ HS S S + ET T F + +P+HST L W
Sbjct: 514 NSHSTTSFTSSITT---TETTSHSTP--------SFSSSITTTETPLHSTPGLTSW 558
>gi|194733753 phosphoinositide-binding protein PIP3-E isoform 1
[Homo sapiens]
Length = 438
Score = 34.3 bits (77), Expect = 0.59
Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 18/157 (11%)
Query: 460 EMSPSSPTLLLRNIEKQSAQLTEIINSLIA------PLNLS-PTSSPLSSKSCSHKCLAN 512
E + +P+ ++ K+ L + +NSL A P+ + SP+ S++ HK L N
Sbjct: 202 ENTVKTPSSFPSSLSKERQSLPDTVNSLSAAEDEGQPITFAVQVHSPVPSEAGIHKALEN 261
Query: 513 GIYRSASENLDELSSSSSWLLNQKHSKKKRKDRTRLKSSSLTFMSTSARTRPLQSFHKRK 572
S S L+ LSS + L+ H D K + M T+ + K
Sbjct: 262 SFVTSESGFLNSLSSDDTSSLSSNHDHLTVPD----KPAGSKIMD-KEETKVSEDDEMEK 316
Query: 573 LYR------LSPTFYWTPQTLPSKETAFLNTTQMPCL 603
LY+ LSP P T +F+ + P +
Sbjct: 317 LYKSLEQASLSPLGDRRPSTKKELRKSFVKRCKNPSI 353
>gi|194733747 phosphoinositide-binding protein PIP3-E isoform 1
[Homo sapiens]
Length = 438
Score = 34.3 bits (77), Expect = 0.59
Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 18/157 (11%)
Query: 460 EMSPSSPTLLLRNIEKQSAQLTEIINSLIA------PLNLS-PTSSPLSSKSCSHKCLAN 512
E + +P+ ++ K+ L + +NSL A P+ + SP+ S++ HK L N
Sbjct: 202 ENTVKTPSSFPSSLSKERQSLPDTVNSLSAAEDEGQPITFAVQVHSPVPSEAGIHKALEN 261
Query: 513 GIYRSASENLDELSSSSSWLLNQKHSKKKRKDRTRLKSSSLTFMSTSARTRPLQSFHKRK 572
S S L+ LSS + L+ H D K + M T+ + K
Sbjct: 262 SFVTSESGFLNSLSSDDTSSLSSNHDHLTVPD----KPAGSKIMD-KEETKVSEDDEMEK 316
Query: 573 LYR------LSPTFYWTPQTLPSKETAFLNTTQMPCL 603
LY+ LSP P T +F+ + P +
Sbjct: 317 LYKSLEQASLSPLGDRRPSTKKELRKSFVKRCKNPSI 353
>gi|40354212 phosphoinositide-binding protein PIP3-E isoform 2 [Homo
sapiens]
Length = 437
Score = 34.3 bits (77), Expect = 0.59
Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 18/157 (11%)
Query: 460 EMSPSSPTLLLRNIEKQSAQLTEIINSLIA------PLNLS-PTSSPLSSKSCSHKCLAN 512
E + +P+ ++ K+ L + +NSL A P+ + SP+ S++ HK L N
Sbjct: 201 ENTVKTPSSFPSSLSKERQSLPDTVNSLSAAEDEGQPITFAVQVHSPVPSEAGIHKALEN 260
Query: 513 GIYRSASENLDELSSSSSWLLNQKHSKKKRKDRTRLKSSSLTFMSTSARTRPLQSFHKRK 572
S S L+ LSS + L+ H D K + M T+ + K
Sbjct: 261 SFVTSESGFLNSLSSDDTSSLSSNHDHLTVPD----KPAGSKIMD-KEETKVSEDDEMEK 315
Query: 573 LYR------LSPTFYWTPQTLPSKETAFLNTTQMPCL 603
LY+ LSP P T +F+ + P +
Sbjct: 316 LYKSLEQASLSPLGDRRPSTKKELRKSFVKRCKNPSI 352
>gi|210147567 hypothetical protein LOC220081 [Homo sapiens]
Length = 696
Score = 34.3 bits (77), Expect = 0.59
Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 48/224 (21%)
Query: 462 SPSSPTLLLRNIEKQSAQLTEIINSLIAPLNLSPTSSPLSSKSCSHKCLANGIYRSASEN 521
S SS T+LLR+ A +++ L PL + T SP+S + L +YR +
Sbjct: 217 SYSSQTMLLRDARSPDAGPSQVTTFLTVPLTFA-TPSPVSESATESSELLLTLYRRSQ-- 273
Query: 522 LDELSSSSSWLLNQKHSKKKRKDRTRLKSSSLTFMSTSARTRPLQSFHKRKLYRLSPTFY 581
+S + W ++ K LKS S T T+ + P + +
Sbjct: 274 ----ASQTDWCYDRTAVKS-------LKSKSETEQETTTKLAPEEHVN------------ 310
Query: 582 WTPQTLPSKETAFLNTTQMPCLQSASTWSSYEHNSESYLLREHVSELDSSFHSVLSLPSD 641
T + L+ AS + ++ ++ + + V +LD +F
Sbjct: 311 ----------TKVQQKKEENVLEFASKENFWDGITDESIDKLEVEDLDENF--------- 351
Query: 642 VPLHFHFETLLKKTEIKGNLAENKFVDEYIISPSPVHSTLNQWR 685
L+ ++T+ KT IK A N+ +++ I + + + N+W+
Sbjct: 352 --LNSSYQTVF-KTIIKEMAAHNELEEDFDIPLTKLLESENRWK 392
>gi|109715837 hypothetical protein LOC79625 [Homo sapiens]
Length = 568
Score = 34.3 bits (77), Expect = 0.59
Identities = 60/278 (21%), Positives = 103/278 (37%), Gaps = 42/278 (15%)
Query: 36 VDEKLKGDTFSQMLGFPTPEPTLNTNFVNLKHFGSPQSSKHYQTVFLMRSNSTLNKHNEN 95
V+ KL D M P+P L+ + + HFG P + + F + + L +H
Sbjct: 227 VEAKLSADDAFMM----APKPGLDFSPFDFAHFGFPSDNSGKERSFQAKPSPKLGRH--- 279
Query: 96 YKQKKLGEPSCNKLKNILYNGSNIQLSKICLSHSEEFIKKEPLSDTTSQCMKDVQII-LD 154
+Y+ + + KIC+ + F + DT Q DV ++ ++
Sbjct: 280 -----------------VYSRPKVDIQKICIGNKNIFTVSDLKPDT--QYYFDVFVVNIN 320
Query: 155 SNI-TKDTNVDKVQLQNCKWYQENALLDKVTDAEIKKGLLHCTQKKIVPGHSNVPVSSSA 213
SN+ T + K K+TD +K+ + V H V +
Sbjct: 321 SNMSTAYVGTFARTKEEAKQKTVELKDGKITDVFVKRKGAKFLRFAPVSSHQKVTFFIHS 380
Query: 214 AEKEEEVHARLLHCVSKQKILLSQARRTQKHLQML---LAKHVVKHYGQQMKLSMKHQLP 270
++ R K+LLSQ + Q+ AK++V+ G + SM
Sbjct: 381 CLDAVQIQVR-----RDGKLLLSQNVEGIQQFQLRGKPKAKYLVRLKGNKKGASML---- 431
Query: 271 KMKTFHEPTTILGNSLPKCTEIK--PEVNTLTAENKLW 306
K+ PT SLP+ T IK ++ T ++ W
Sbjct: 432 KILATTRPTKQSFPSLPEDTRIKAFDKLRTCSSATVAW 469
>gi|22749217 coiled-coil domain containing 63 [Homo sapiens]
Length = 563
Score = 33.9 bits (76), Expect = 0.77
Identities = 40/180 (22%), Positives = 74/180 (41%), Gaps = 12/180 (6%)
Query: 82 LMRSNSTLNKHNENYKQKKL-------GEPSCNKLKNIL--YNGSNIQLSKICLSHSEEF 132
LM+S+ +N+ +NY + +L E LK +L + +Q+ K + + F
Sbjct: 79 LMKSSRNMNRSEKNYMELRLLLQTKEDYEALIKSLKVLLAELDEKILQMEKKIANQKQIF 138
Query: 133 IKKEPLSDTTSQCMKDVQIILDSNITKDTNVDKVQLQNCKWYQE--NALLDKVTDAEIKK 190
K + ++ + K + I+ + DK+ N K +E + +K + +
Sbjct: 139 AKMQE-ANNPRKLQKQIHILETRLNLVTVHFDKMLTTNAKLRKEIEDLRFEKAAYDNVYQ 197
Query: 191 GLLHCTQKKIVPGHSNVPVSSSAAEKEEEVHARLLHCVSKQKILLSQARRTQKHLQMLLA 250
L HC + + + SS A E+ E AR+ +QK SQ + L+ L A
Sbjct: 198 QLQHCLLMEKKTMNLAIEQSSQAYEQRVEAMARMAAMKDRQKKDTSQYNLEIRELERLYA 257
>gi|189491742 ataxin 7 isoform b [Homo sapiens]
Length = 945
Score = 33.5 bits (75), Expect = 1.0
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 476 QSAQLTEIINSLIAPLNLSPT-SSPLSSKSC---SHKCLANGIYRSASENLDELSSSSSW 531
QS Q++ +S P LS SSP+S K S K L S N SSS+S
Sbjct: 642 QSRQVSSSSSSPSTPSGLSSVPSSPMSRKPQKLKSSKSLRPKESSGNSTNCQNASSSTSG 701
Query: 532 LLNQKHSKKKRKDRTRLKSSSLTFMSTSARTRPLQSFHKRKLYRLSPTFYWTPQTLPSKE 591
KK++ L SS + S+S+ + ++SF K + P + P T+ S
Sbjct: 702 ----GSGKKRKNSSPLLVHSSSSSSSSSSSSHSMESFRKNCVAHSGPPY---PSTVTSSH 754
Query: 592 TAFLN 596
+ LN
Sbjct: 755 SIGLN 759
>gi|4506797 ataxin 7 isoform a [Homo sapiens]
Length = 892
Score = 33.5 bits (75), Expect = 1.0
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 476 QSAQLTEIINSLIAPLNLSPT-SSPLSSKSC---SHKCLANGIYRSASENLDELSSSSSW 531
QS Q++ +S P LS SSP+S K S K L S N SSS+S
Sbjct: 642 QSRQVSSSSSSPSTPSGLSSVPSSPMSRKPQKLKSSKSLRPKESSGNSTNCQNASSSTSG 701
Query: 532 LLNQKHSKKKRKDRTRLKSSSLTFMSTSARTRPLQSFHKRKLYRLSPTFYWTPQTLPSKE 591
KK++ L SS + S+S+ + ++SF K + P + P T+ S
Sbjct: 702 ----GSGKKRKNSSPLLVHSSSSSSSSSSSSHSMESFRKNCVAHSGPPY---PSTVTSSH 754
Query: 592 TAFLN 596
+ LN
Sbjct: 755 SIGLN 759
>gi|17978469 cyclin T2 isoform b [Homo sapiens]
Length = 730
Score = 33.5 bits (75), Expect = 1.0
Identities = 58/270 (21%), Positives = 108/270 (40%), Gaps = 22/270 (8%)
Query: 403 HRQIRASKGIVVLEECQLPKDILKKQMQFADQAASLNILGNPQVPQECQDPVPEQDFEMS 462
H I + GI+ ++ L K K++++ D + + QV Q+ + + S
Sbjct: 420 HGPISTTPGIIP-QKMSLDKYREKRKLETLDLDVRDHYIA-AQVEQQHKQGQSQAASSSS 477
Query: 463 PSSPTLL---LRNIEKQSAQLTEIINSLIAPLNLSPTSSPLSSKSCSHKCLANGIYR-SA 518
+SP + + N EK A E SL + + PT S + K + R S+
Sbjct: 478 VTSPIKMKIPIANTEKYMADKKEKSGSLKLRIPIPPTDKSASKEELKMKIKVSSSERHSS 537
Query: 519 SENLDELSSSSSWLLNQKHSKKKRKDRTRLKSSSLTFMSTSARTRPLQSFHKRKLYRLSP 578
S+ S SS +++ H K+K K+ + + + + + + K + P
Sbjct: 538 SDEGSGKSKHSSPHISRDH-KEKHKEHPSSRHHTSSHKHSHSHSGSSSGGSKHSADGIPP 596
Query: 579 TFYWTPQTLPSKETAFLNTTQMPCL------------QSASTWSSYEHNSESYLLREHVS 626
T +P L S + +++ L S S+ SS +S S +++++S
Sbjct: 597 TVLRSPVGLSSDGISSSSSSSRKRLHVNDASHNHHSKMSKSSKSSGSSSSSSSSVKQYIS 656
Query: 627 ELDSSFHSVLSLPSDVPL---HFHFETLLK 653
+S F+ L P V + H TL+K
Sbjct: 657 SHNSVFNHPLPPPPPVTYQVGYGHLSTLVK 686
>gi|110611218 ribosome binding protein 1 [Homo sapiens]
Length = 977
Score = 32.7 bits (73), Expect = 1.7
Identities = 34/162 (20%), Positives = 68/162 (41%), Gaps = 9/162 (5%)
Query: 92 HNENYKQKKLGEPSCNKLKNILYNGSNIQLSKICLSHSEEFIKKEPLSDTTSQCMKDVQI 151
+ E+ K+ + + L+ L NG N QL+++ E I ++ L+ TSQ
Sbjct: 333 YREHVKEVQQLQGKIRTLQEQLENGPNTQLARL---QQENSILRDALNQATSQVESKQNA 389
Query: 152 ILDSNITKDTNVDKVQLQNCKWYQENALLDKVTDAEIKKGLLHCTQKKIVPGHSNVPVSS 211
L + + V K ++ + +++ K +A+ +K+++ ++ S
Sbjct: 390 ELAKLRQELSKVSKELVEKSEAVRQDEQQRKALEAKAA-----AFEKQVLQLQASHRESE 444
Query: 212 SAAEKE-EEVHARLLHCVSKQKILLSQARRTQKHLQMLLAKH 252
A +K +EV L H S L + A + Q+ Q + H
Sbjct: 445 EALQKRLDEVSRELCHTQSSHASLRADAEKAQEQQQQMAELH 486
>gi|110611220 ribosome binding protein 1 [Homo sapiens]
Length = 977
Score = 32.7 bits (73), Expect = 1.7
Identities = 34/162 (20%), Positives = 68/162 (41%), Gaps = 9/162 (5%)
Query: 92 HNENYKQKKLGEPSCNKLKNILYNGSNIQLSKICLSHSEEFIKKEPLSDTTSQCMKDVQI 151
+ E+ K+ + + L+ L NG N QL+++ E I ++ L+ TSQ
Sbjct: 333 YREHVKEVQQLQGKIRTLQEQLENGPNTQLARL---QQENSILRDALNQATSQVESKQNA 389
Query: 152 ILDSNITKDTNVDKVQLQNCKWYQENALLDKVTDAEIKKGLLHCTQKKIVPGHSNVPVSS 211
L + + V K ++ + +++ K +A+ +K+++ ++ S
Sbjct: 390 ELAKLRQELSKVSKELVEKSEAVRQDEQQRKALEAKAA-----AFEKQVLQLQASHRESE 444
Query: 212 SAAEKE-EEVHARLLHCVSKQKILLSQARRTQKHLQMLLAKH 252
A +K +EV L H S L + A + Q+ Q + H
Sbjct: 445 EALQKRLDEVSRELCHTQSSHASLRADAEKAQEQQQQMAELH 486
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 32.7 bits (73), Expect = 1.7
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 165 KVQLQNCKWYQENALLDKVTD-AEIKKGLLHCTQKKIVPGHSNVPVSSSAAEKEE----E 219
++ L++ + Q L+KVT ++++ L +K N + +E++E E
Sbjct: 711 RLNLRDAEANQLKEELEKVTRLTQLEQSALQAELEKERQALKNALGKAQFSEEKEQENSE 770
Query: 220 VHARLLHCVSKQKILLSQARRTQKHLQM----LLAKHVVKHYGQQMKLSMKHQLPKMKTF 275
+HA+L H +L Q + Q HL L+ V +++ +K +M
Sbjct: 771 LHAKLKHLQDDNNLLKQQLKDFQNHLNHVVDGLVRPEEVAARVDELRRKLKLGTGEM-NI 829
Query: 276 HEPTTILGNSLPKCTEIKPEVNTLTAENKLWD 307
H P+ +LG SL +++ + + + A +K W+
Sbjct: 830 HSPSDVLGKSL---ADLQKQFSEILARSK-WE 857
>gi|56550043 sarcolemma associated protein [Homo sapiens]
Length = 811
Score = 32.7 bits (73), Expect = 1.7
Identities = 67/311 (21%), Positives = 118/311 (37%), Gaps = 37/311 (11%)
Query: 87 STLNKHNENYKQKKLGEPSCNKLKNIL--YNGSNIQLSKICLSHSEEFIKKEPLSDTTSQ 144
S N +E K++ E + +L+ + YNG+ ++ + K+E +
Sbjct: 278 SLSNTEDECTHLKEMNERTQEELRELANKYNGAVNEIKDLSDKLKVAEGKQEEIQQKGQA 337
Query: 145 CMKDVQIILDSNITKD----TNVDKVQLQN------CKWYQENALLDKVTDAEIKKGLLH 194
K++Q +D K+ ++ +Q N QE+ L D +
Sbjct: 338 EKKELQHKIDEMEEKEQELQAKIEALQADNDFTNERLTALQEHLLSKSGGDCTFIHQFIE 397
Query: 195 CTQKKIVPGHSNVPVSSSAAEKEEEVHAR-------LLHCVSKQKILLSQARRTQKHLQM 247
C +K IV GH V + KE + A+ L K + A+ ++ L
Sbjct: 398 CQKKLIVEGHLTKAVEETKLSKENQTRAKESDFSDTLSPSKEKSSDDTTDAQMDEQDLNE 457
Query: 248 LLAK-HVVKH--YGQQMKLSMKHQLPKM-KTFHEPTTILGNSLPKCTEIKP--EVNTLTA 301
LAK ++K G Q ++ K ++ + K E + S KC E++ E
Sbjct: 458 PLAKVSLLKDDLQGAQSEIEAKQEIQHLRKELIEAQELARTSKQKCFELQALLEEERKAY 517
Query: 302 ENKLWDDAKNGFARCTAAEIQRFAFSATGLLSHVEEGLDSDATDSSSDDDL----DEYTL 357
N++ + K + A++QR L E DS+ T S+ D+L DE L
Sbjct: 518 RNQVEESTKQ--IQVLQAQLQRLHIDTENL----REEKDSEIT--STRDELLSARDEILL 569
Query: 358 RKNVAVNCSTE 368
A ++E
Sbjct: 570 LHQAAAKVASE 580
>gi|93102405 hypothetical protein LOC84182 [Homo sapiens]
Length = 757
Score = 32.0 bits (71), Expect = 2.9
Identities = 50/201 (24%), Positives = 73/201 (36%), Gaps = 12/201 (5%)
Query: 443 NPQVPQECQDPVPEQDFEMSPSSPTLLLRNIEKQSAQLTEIINSLIAPLNLSPTSSPLSS 502
N +VP C + +++S E A+ + ++ +S P S
Sbjct: 104 NNKVPSRCSETTLVNIYDLSDEDAGWRTSLSETSKARHDNLDGDVLGNF-VSSKRPPHKS 162
Query: 503 KSCSHKCLANGIYRSASENLDELSSSSSWLLNQKHSKKKRKDRTRLKSSSLT--FMSTSA 560
K + SA E +D+L S S K+ + +R KS + MS
Sbjct: 163 KPMQTVPGETPVLTSAWEKIDKLHSEPSL------DVKRMGENSRPKSGLIVRGMMSGPI 216
Query: 561 RTRPLQSFHKRKLYRLSPTFYWT-PQTLPSKETAFLNTTQMPCLQSASTWSSYEHNSESY 619
+ P SFH+ L R SP+ T PQ K TQ L AS+ SS S
Sbjct: 217 ASSPQDSFHRHYLRRSSPSSSSTQPQEESRKVPELFVCTQQDIL--ASSNSSPSRTSLGQ 274
Query: 620 LLREHVSELDSSFHSVLSLPS 640
L V ++ S LPS
Sbjct: 275 LSELTVERQKTTASSPPHLPS 295
>gi|44917604 SLIT-ROBO Rho GTPase activating protein 1 [Homo
sapiens]
Length = 1085
Score = 31.6 bits (70), Expect = 3.8
Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 11/131 (8%)
Query: 733 ESGSHSNFTAVSNVNVLSRIQNSSRNTARRRLRS-ESSYDI--DNIVIPMSLVAPAKLEK 789
ES H+ + + NV+ R S ++ R +S E ++ + D + + L K
Sbjct: 110 ESKDHATLSDIYLNNVIMRFMQISEDSTRMFKKSKEIAFQLHEDLMKVLNELYTVMKTYH 169
Query: 790 LQYKEILTPSWRMVVLQPLDEYNLGKEEIEDLSDEVFSLRHKKYEEREQARWSLWEQSKW 849
+ + E ++ ++ + +E +G+ D VF H + EER Q R S+ + K
Sbjct: 170 MYHAESISAESKLKEAEKQEEKQIGRS-----GDPVF---HIRLEERHQRRSSVKKIEKM 221
Query: 850 HRRNSRAYSKN 860
+ YS+N
Sbjct: 222 KEKRQAKYSEN 232
>gi|21450785 suppressor of cytokine signaling 6 [Homo sapiens]
Length = 535
Score = 31.6 bits (70), Expect = 3.8
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 416 EECQLPKDILKKQMQFADQAASLNILGNP----QVPQECQDPVPEQDFEMSPSSPTLLLR 471
+E Q+ +D++ F DQ+ + ++G Q P+ D VP + P + R
Sbjct: 265 DESQVDQDLVVAPEIFVDQSVNGLLIGTTGVMLQSPRAGHDDVPPLSPLLPPMQNNQIQR 324
Query: 472 NIEKQSAQLTEIINSLIAPLNLSPTSSP 499
N + + S+ LN P S+P
Sbjct: 325 NFSGLTGTEAHVAESMRCHLNFDPNSAP 352
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 31.2 bits (69), Expect = 5.0
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 582 WTPQTLPSKETAFLNTTQMPCLQSASTWSSYEHNSESYLLREHVSEL 628
W +++P++E F+NT Q+ L + S W + +S L+ + EL
Sbjct: 6720 WFLKSMPAEEAHFINTKQLKFLLARSRWQRSLMSYKSILVMRSIPEL 6766
>gi|237681069 spatacsin isoform 2 [Homo sapiens]
Length = 2330
Score = 31.2 bits (69), Expect = 5.0
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 768 SSYDIDNIVIPMSLVAPAKLEKLQYKEILTPSWRMVVLQPLDEYNLGKEEIEDLSDEVFS 827
+SY I+N+ + LE+LQ + R+ L L NL I++++ E+ +
Sbjct: 1662 TSYSIENLQHECRSI----LERLQTDGQFALARRVAELAELPVDNL---VIKEITQEMQT 1714
Query: 828 LRHKKYEEREQARWSLW----EQSKWHRRNSRAYSKNVEGQDLLLKEYPNNFSSSQQ 880
L+H + +QAR W E K + +S+A S Q + E+P +SS ++
Sbjct: 1715 LKHIEQWSLKQARIDFWKKCHENFKKNSISSKAASSFFSTQAHVACEHPTGWSSMEE 1771
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.127 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,469,471
Number of Sequences: 37866
Number of extensions: 1795054
Number of successful extensions: 4786
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 4745
Number of HSP's gapped (non-prelim): 95
length of query: 987
length of database: 18,247,518
effective HSP length: 112
effective length of query: 875
effective length of database: 14,006,526
effective search space: 12255710250
effective search space used: 12255710250
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.