SPG11 16086

Name: SPG11	Sequence: fasta or formatted (2330aa)		NCBI GI: 237681069
Description: spatacsin isoform 2		Referenced in: Additional Brain Proteins
Other entries for this name: alt prot [2443aa] spatacsin isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 135 3 C cysteine 2.8 65 2 D aspartate 4.7 110 2 E glutamate 7.7 180 3 F phenylalanine 4.5 105 2 G glycine 3.8 89 3 H histidine 3.5 81 2 I isoleucine 6.0 140 2 K lysine 6.0 139 2 L leucine 13.9 324 3 M methionine 2.0 46 1 N asparagine 4.3 100 2 P proline 3.6 85 2 Q glutamine 5.7 133 3 R arginine 3.6 83 2 S serine 8.1 188 3 T threonine 4.7 109 3 V valine 4.8 112 2 W tryptophan 1.8 42 2 Y tyrosine 2.7 64 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spatacsin isoform 2 SPG11 0.838 spatacsin isoform 1 HMMR 0.002 hyaluronan-mediated motility receptor isoform d [Ho... HMMR 0.002 hyaluronan-mediated motility receptor isoform a [Ho... HMMR 0.002 hyaluronan-mediated motility receptor isoform c [Ho... HMMR 0.002 hyaluronan-mediated motility receptor isoform b [Ho... C10orf79 0.002 hypothetical protein LOC80217 INO80 0.002 INO80 complex homolog 1 IPMK 0.002 inositol polyphosphate multikinase KIAA1598 0.002 shootin1 isoform a KIAA1598 0.002 shootin1 isoform b ANGPT2 0.002 angiopoietin 2 isoform b precursor FMNL3 0.002 formin-like 3 isoform 2 FMNL3 0.002 formin-like 3 isoform 1 ANGPT2 0.001 angiopoietin 2 isoform a precursor CCDC18 0.001 sarcoma antigen NY-SAR-41 CEBPZ 0.001 CCAAT/enhancer binding protein zeta GSR 0.001 glutathione reductase POFUT2 0.001 protein O-fucosyltransferase 2 isoform C Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.