BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|39540514 pyrin and HIN domain family, member 1 alpha 1 isoform [Homo sapiens] (492 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|39540514 pyrin and HIN domain family, member 1 alpha 1 isofor... 974 0.0 gi|41282048 pyrin and HIN domain family, member 1 alpha 2 isofor... 950 0.0 gi|41282056 pyrin and HIN domain family, member 1 beta 1 isoform... 895 0.0 gi|41282051 pyrin and HIN domain family, member 1 beta 2 isoform... 870 0.0 gi|112789562 interferon, gamma-inducible protein 16 [Homo sapiens] 588 e-168 gi|4505227 myeloid cell nuclear differentiation antigen [Homo sa... 399 e-111 gi|4757734 absent in melanoma 2 [Homo sapiens] 169 7e-42 gi|169161845 PREDICTED: similar to hCG2041495 [Homo sapiens] 151 1e-36 gi|169162310 PREDICTED: similar to hCG2041495 [Homo sapiens] 150 3e-36 gi|169162679 PREDICTED: hypothetical protein LOC646377 [Homo sap... 150 3e-36 gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 44 3e-04 gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 43 6e-04 gi|197276602 microtubule-associated protein 4 isoform 5 [Homo sa... 41 0.003 gi|197276600 microtubule-associated protein 4 isoform 4 [Homo sa... 41 0.003 gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sap... 41 0.003 gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap... 41 0.003 gi|52426735 ankyrin 2 isoform 1 [Homo sapiens] 41 0.003 gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens] 40 0.006 gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 38 0.018 gi|6912458 calcineurin binding protein 1 [Homo sapiens] 38 0.018 gi|238624188 diffuse panbronchiolitis critical region 1 protein ... 37 0.031 gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit... 37 0.031 gi|28559039 mediator complex subunit 1 [Homo sapiens] 37 0.031 gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 37 0.031 gi|22547219 Toll-interleukin 1 receptor domain-containing adapto... 37 0.041 gi|89111122 Toll-interleukin 1 receptor domain-containing adapto... 37 0.041 gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 37 0.053 gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 37 0.053 gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 37 0.053 gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 37 0.053 >gi|39540514 pyrin and HIN domain family, member 1 alpha 1 isoform [Homo sapiens] Length = 492 Score = 974 bits (2519), Expect = 0.0 Identities = 492/492 (100%), Positives = 492/492 (100%) Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA Sbjct: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60 Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACT 120 GLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACT Sbjct: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACT 120 Query: 121 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 180 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ Sbjct: 121 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 180 Query: 181 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 240 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH Sbjct: 181 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 240 Query: 241 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 300 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV Sbjct: 241 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 300 Query: 301 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 360 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE Sbjct: 301 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 360 Query: 361 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ 420 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ Sbjct: 361 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ 420 Query: 421 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTVAPPLS 480 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTVAPPLS Sbjct: 421 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTVAPPLS 480 Query: 481 SDTSTNRHPAVP 492 SDTSTNRHPAVP Sbjct: 481 SDTSTNRHPAVP 492 >gi|41282048 pyrin and HIN domain family, member 1 alpha 2 isoform [Homo sapiens] Length = 483 Score = 950 bits (2456), Expect = 0.0 Identities = 483/492 (98%), Positives = 483/492 (98%), Gaps = 9/492 (1%) Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA Sbjct: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60 Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACT 120 GLGKLIEFFKEIPTLGDLAETLKREKLKV KGIIPSKKTKQKEVYPATPACT Sbjct: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKV---------KGIIPSKKTKQKEVYPATPACT 111 Query: 121 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 180 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ Sbjct: 112 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 171 Query: 181 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 240 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH Sbjct: 172 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 231 Query: 241 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 300 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV Sbjct: 232 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 291 Query: 301 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 360 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE Sbjct: 292 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 351 Query: 361 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ 420 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ Sbjct: 352 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ 411 Query: 421 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTVAPPLS 480 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTVAPPLS Sbjct: 412 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTVAPPLS 471 Query: 481 SDTSTNRHPAVP 492 SDTSTNRHPAVP Sbjct: 472 SDTSTNRHPAVP 483 >gi|41282056 pyrin and HIN domain family, member 1 beta 1 isoform [Homo sapiens] Length = 461 Score = 895 bits (2312), Expect = 0.0 Identities = 453/453 (100%), Positives = 453/453 (100%) Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA Sbjct: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60 Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACT 120 GLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACT Sbjct: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACT 120 Query: 121 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 180 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ Sbjct: 121 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 180 Query: 181 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 240 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH Sbjct: 181 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 240 Query: 241 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 300 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV Sbjct: 241 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 300 Query: 301 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 360 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE Sbjct: 301 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 360 Query: 361 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ 420 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ Sbjct: 361 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ 420 Query: 421 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTK 453 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTK Sbjct: 421 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTK 453 >gi|41282051 pyrin and HIN domain family, member 1 beta 2 isoform [Homo sapiens] Length = 452 Score = 870 bits (2249), Expect = 0.0 Identities = 444/453 (98%), Positives = 444/453 (98%), Gaps = 9/453 (1%) Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA Sbjct: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60 Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACT 120 GLGKLIEFFKEIPTLGDLAETLKREKLKV KGIIPSKKTKQKEVYPATPACT Sbjct: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKV---------KGIIPSKKTKQKEVYPATPACT 111 Query: 121 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 180 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ Sbjct: 112 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 171 Query: 181 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 240 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH Sbjct: 172 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 231 Query: 241 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 300 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV Sbjct: 232 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 291 Query: 301 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 360 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE Sbjct: 292 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 351 Query: 361 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ 420 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ Sbjct: 352 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ 411 Query: 421 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTK 453 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTK Sbjct: 412 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTK 444 >gi|112789562 interferon, gamma-inducible protein 16 [Homo sapiens] Length = 729 Score = 588 bits (1516), Expect = e-168 Identities = 309/456 (67%), Positives = 362/456 (79%), Gaps = 10/456 (2%) Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60 M YK IVLLKGLEVINDYHFR+VKSLLSNDLKLN KM+EEYDKIQIADLMEEKF GDA Sbjct: 1 MGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKFRGDA 60 Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACT 120 GLGKLI+ F++IPTL DLAETLK+EKLKV KG S+K K KEV +PA + Sbjct: 61 GLGKLIKIFEDIPTLEDLAETLKKEKLKV---------KGPALSRKRK-KEVDATSPAPS 110 Query: 121 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 180 S+ + +GAE T G QKRKK ++E+ G K SK+S+EQT+P AGA STAMGRSP P+ Sbjct: 111 TSSTVKTEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPK 170 Query: 181 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 240 TS SAPPN+SSTE+ K +A T +N+ ++ P+I VL+ TK F+YE+ E E++ MFH Sbjct: 171 TSLSAPPNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFH 230 Query: 241 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 300 ATVATQTQFFHVKVLN +LK KF K+IIIIS+Y + +SLLEVNE S+VSEAGP+QTFEV Sbjct: 231 ATVATQTQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEV 290 Query: 301 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 360 P II RAK+ KI+ILHKQ SG IVYG+FMLH K VN+KTTIYEIQD G M VVG G+ Sbjct: 291 PNKIINRAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQ 350 Query: 361 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ 420 CHNIPCE+GDKL+LFCFRLRK+ MSKL+SEMHSFIQI+K TN R++D +SM LPQEQ Q Sbjct: 351 CHNIPCEEGDKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQRQ 410 Query: 421 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKDE 456 P PSEASTT PESHL+TPQMPPTTPSSS FTKK E Sbjct: 411 LPYPSEASTTFPESHLRTPQMPPTTPSSSFFTKKSE 446 Score = 177 bits (449), Expect = 2e-44 Identities = 118/298 (39%), Positives = 154/298 (51%), Gaps = 21/298 (7%) Query: 114 PATPACTPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAM 173 P P TPS+ K +E+T+ R ++ KE + S A Sbjct: 429 PQMPPTTPSSSFFTKKSEDTISKMN---------DFMRMQILKEGSHFPGPFMTSIGPAE 479 Query: 174 GRSPPPQTSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIA-----MVLNATKVFKY 228 PQ PP+T S+ L L R T + + ED + MVLNAT+ F Y Sbjct: 480 SHPHTPQM----PPSTPSSSFLTTLKPRLKTEPEEVSIEDSAQSDLKEVMVLNATESFVY 535 Query: 229 ESSENEQRRMFHATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASS 288 E E Q++MFHATVAT+ + F VKV NI+LK KF K+II I+NY RN LEV + Sbjct: 536 EPKE--QKKMFHATVATENEVFRVKVFNIDLKEKFTPKKIIAIANYVCRNGFLEVYPFTL 593 Query: 289 VSEAGPDQTFEVPKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQD 348 V++ D+ E+PK +IR A PKIN L QT G V G+F +H K V + T YEIQD Sbjct: 594 VADVNADRNMEIPKGLIRSASVTPKINQLCSQTKGSFVNGVFEVHKKNVRGEFTYYEIQD 653 Query: 349 KTGSMAVVGKGECHNIPCEKGDKLRLFCFRLR-KRENMSKLMSEMHSFIQIQKNTNQR 405 TG M VV G I CE+GDKL+L CF L K N +L S +HS I++ K + Sbjct: 654 NTGKMEVVVHGRLTTINCEEGDKLKLTCFELAPKSGNTGELRSVIHSHIKVIKTRKNK 711 Score = 30.4 bits (67), Expect = 3.8 Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 1/86 (1%) Query: 397 QIQKNTNQRSHDSRSMALPQEQSQHPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKDE 456 Q +K + + + + +EQ+Q P P+ A + +P+ + P +SS T+ + Sbjct: 127 QKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTSLSAPPNSSSTENPK 186 Query: 457 THPGAQSSP-ANFRITSPTVAPPLSS 481 T Q +P N P + LS+ Sbjct: 187 TVAKCQVTPRRNVLQKRPVIVKVLST 212 >gi|4505227 myeloid cell nuclear differentiation antigen [Homo sapiens] Length = 407 Score = 399 bits (1024), Expect = e-111 Identities = 214/400 (53%), Positives = 282/400 (70%), Gaps = 5/400 (1%) Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60 M N YKKI+LLKG E+++DYHF +KSLL+ DL L KM+EEY++I+I DLME+KF G A Sbjct: 1 MVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVA 60 Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACT 120 L KLIE K++P+L +L L++EK KVA KI++ + P KK Q+EV A PA T Sbjct: 61 CLDKLIELAKDMPSLKNLVNNLRKEKSKVAKKIKT---QEKAPVKKINQEEVGLAAPAPT 117 Query: 121 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 180 N+LT++ QKRK P++E+T KR+K+S+EQ++P +GASTS A+ P PQ Sbjct: 118 ARNKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQ 177 Query: 181 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 240 TSSS P NTS T + + A R A +N+ + DP+ +VL AT FKYES EN + MFH Sbjct: 178 TSSSTPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKATAPFKYESPENGKSTMFH 237 Query: 241 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 300 ATVA++TQ+FHVKV +INLK KF++K++I IS+YS+ ++E+ EASSVS+ +Q FEV Sbjct: 238 ATVASKTQYFHVKVFDINLKEKFVRKKVITISDYSECKGVMEIKEASSVSDF--NQNFEV 295 Query: 301 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 360 P II A K PKI+ L+KQ SG +VYGLFML K V++K TIYEIQD TGSM VVG G+ Sbjct: 296 PNRIIEIANKTPKISQLYKQASGTMVYGLFMLQKKSVHKKNTIYEIQDNTGSMDVVGSGK 355 Query: 361 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQK 400 HNI CEKGDKLRLFC +LR + KL+ HSFI++ K Sbjct: 356 WHNIKCEKGDKLRLFCLQLRTVDRKLKLVCGSHSFIKVIK 395 Score = 48.9 bits (115), Expect = 1e-05 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 3/80 (3%) Query: 386 SKLMSEMHSFIQI---QKNTNQRSHDSRSMALPQEQSQHPKPSEASTTLPESHLKTPQMP 442 +KL SE I + +K N+ +++ + QEQS+ P PS AST+ H PQ Sbjct: 120 NKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTS 179 Query: 443 PTTPSSSSFTKKDETHPGAQ 462 +TPS++SFT ET Q Sbjct: 180 SSTPSNTSFTPNQETQAQRQ 199 >gi|4757734 absent in melanoma 2 [Homo sapiens] Length = 343 Score = 169 bits (427), Expect = 7e-42 Identities = 125/400 (31%), Positives = 189/400 (47%), Gaps = 62/400 (15%) Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60 M + YK+I+LL GL+ I D K LS++ + ++IQ+A LM + + Sbjct: 1 MESKYKEILLLTGLDNITDEELDRFKFFLSDEFNIATGKLHTANRIQVATLMIQNAGAVS 60 Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACT 120 + K I F+++ + Sbjct: 61 AVMKTIRIFQKLNYM--------------------------------------------- 75 Query: 121 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 180 L AK +E +K K + ++ TK +S+ + P+ SA A R+ P Sbjct: 76 ----LLAKRLQE----EKEKVDKQYKSVTKPKPLSQAEMSPAASAAIRNDVAKQRAAPKV 127 Query: 181 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 240 + P E + +A + + + F++ + MVL A K F +E+ E +Q MFH Sbjct: 128 SPHVKP------EQKQMVAQQESI--REGFQKRCLPVMVLKAKKPFTFETQEGKQE-MFH 178 Query: 241 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 300 ATVAT+ +FF VKV N LK KFI KRIIII+ Y + + LEVN AS V +A DQ V Sbjct: 179 ATVATEKEFFFVKVFNTLLKDKFIPKRIIIIARYYRHSGFLEVNSASRVLDAESDQKVNV 238 Query: 301 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 360 P +IIR+A + PKIN L Q G IV GLF++ +K ++++ D TG M V+G Sbjct: 239 PLNIIRKAGETPKINTLQTQPLGTIVNGLFVVQKVTEKKKNILFDLSDNTGKMEVLGVRN 298 Query: 361 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQK 400 + C++GDK+RL F L K +L S +HS I++ K Sbjct: 299 EDTMKCKEGDKVRLTFFTLSKNGEKLQLTSGVHSTIKVIK 338 >gi|169161845 PREDICTED: similar to hCG2041495 [Homo sapiens] Length = 196 Score = 151 bits (382), Expect = 1e-36 Identities = 87/156 (55%), Positives = 100/156 (64%), Gaps = 14/156 (8%) Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60 M + YK VLLKGLE INDYHF I+ SLL NDLKLN ++EYDKIQIADLMEEKFPGDA Sbjct: 41 MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDA 100 Query: 61 GLGKLIEFFKEIPT-LGDLAETLKREK-------------LKVANKIESIPVKGIIPSKK 106 GLGKL + T GDLAETL++ K L V NKI+SIP KG SKK Sbjct: 101 GLGKLRTLQRNTNTGRGDLAETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKK 160 Query: 107 TKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKP 142 KQ++V P TP T + TA+G EET Q+ P Sbjct: 161 RKQRKVGPTTPLATTDKKFTAEGGEETPIAQRFHTP 196 >gi|169162310 PREDICTED: similar to hCG2041495 [Homo sapiens] Length = 196 Score = 150 bits (378), Expect = 3e-36 Identities = 86/156 (55%), Positives = 99/156 (63%), Gaps = 14/156 (8%) Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60 M + YK VLLKGLE INDYHF I+ SLL NDLKLN ++EYDKIQIADLMEEKFPGDA Sbjct: 41 MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDA 100 Query: 61 GLGKLIEFFKEIPT-LGDLAETLKREK-------------LKVANKIESIPVKGIIPSKK 106 G GKL + T GDLAETL++ K L V NKI+SIP KG SKK Sbjct: 101 GFGKLRTLQRNTNTGRGDLAETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKK 160 Query: 107 TKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKP 142 KQ++V P TP T + TA+G EET Q+ P Sbjct: 161 RKQRKVGPTTPLATTDKKFTAEGGEETPIAQRFHTP 196 >gi|169162679 PREDICTED: hypothetical protein LOC646377 [Homo sapiens] Length = 196 Score = 150 bits (378), Expect = 3e-36 Identities = 86/156 (55%), Positives = 99/156 (63%), Gaps = 14/156 (8%) Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60 M + YK VLLKGLE INDYHF I+ SLL NDLKLN ++EYDKIQIADLMEEKFPGDA Sbjct: 41 MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDA 100 Query: 61 GLGKLIEFFKEIPT-LGDLAETLKREK-------------LKVANKIESIPVKGIIPSKK 106 G GKL + T GDLAETL++ K L V NKI+SIP KG SKK Sbjct: 101 GFGKLRTLQRNTNTGRGDLAETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKK 160 Query: 107 TKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKP 142 KQ++V P TP T + TA+G EET Q+ P Sbjct: 161 RKQRKVGPTTPLATTDKKFTAEGGEETPIAQRFHTP 196 >gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] Length = 2817 Score = 43.9 bits (102), Expect = 3e-04 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 1/89 (1%) Query: 73 PTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEE 132 P L D+ E ++ K K K E + K ++ +KT++K++ P P P + + Sbjct: 1019 PVLRDMKEEREQRKEKEGEKAEKVTEKVVVKPEKTEKKDLPPPPPPPQPPAPIQPQSVPP 1078 Query: 133 TLGPQKRKKPSEEETGTKRSKMSKEQTRP 161 + P+ K PS ET T K S++ +P Sbjct: 1079 PIQPEAEKFPS-TETATLAQKPSQDTEKP 1106 >gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] Length = 2240 Score = 43.1 bits (100), Expect = 6e-04 Identities = 26/73 (35%), Positives = 32/73 (43%) Query: 134 LGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTE 193 L P++ P+ + T K P CSA A+ ST SPPP PP Sbjct: 1218 LQPEEADVPAYPKVATVPQSEKKPSKYPLCSADAAVSTTPPGSPPPPPPLPEPPVLKVLS 1277 Query: 194 SLKPLANRHATAS 206 SLKP A ATA+ Sbjct: 1278 SLKPAAPSPATAA 1290 >gi|197276602 microtubule-associated protein 4 isoform 5 [Homo sapiens] Length = 817 Score = 40.8 bits (94), Expect = 0.003 Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 2/116 (1%) Query: 91 NKIESIPVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETG-T 149 NK G++P+ K+ V A P+ PS + K + P+KR PS+ + Sbjct: 472 NKKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPA 531 Query: 150 KRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLANRHATA 205 RS QT + A+ ++ S P T P TE KP + TA Sbjct: 532 SRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEG-KPAEVKKMTA 586 >gi|197276600 microtubule-associated protein 4 isoform 4 [Homo sapiens] Length = 1135 Score = 40.8 bits (94), Expect = 0.003 Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 2/116 (1%) Query: 91 NKIESIPVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETG-T 149 NK G++P+ K+ V A P+ PS + K + P+KR PS+ + Sbjct: 737 NKKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPA 796 Query: 150 KRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLANRHATA 205 RS QT + A+ ++ S P T P TE KP + TA Sbjct: 797 SRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEG-KPAEVKKMTA 851 >gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sapiens] Length = 887 Score = 40.8 bits (94), Expect = 0.003 Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 2/116 (1%) Query: 91 NKIESIPVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETG-T 149 NK G++P+ K+ V A P+ PS + K + P+KR PS+ + Sbjct: 472 NKKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPA 531 Query: 150 KRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLANRHATA 205 RS QT + A+ ++ S P T P TE KP + TA Sbjct: 532 SRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEG-KPAEVKKMTA 586 >gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sapiens] Length = 1152 Score = 40.8 bits (94), Expect = 0.003 Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 2/116 (1%) Query: 91 NKIESIPVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETG-T 149 NK G++P+ K+ V A P+ PS + K + P+KR PS+ + Sbjct: 737 NKKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPA 796 Query: 150 KRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLANRHATA 205 RS QT + A+ ++ S P T P TE KP + TA Sbjct: 797 SRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEG-KPAEVKKMTA 851 >gi|52426735 ankyrin 2 isoform 1 [Homo sapiens] Length = 3957 Score = 40.8 bits (94), Expect = 0.003 Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 18/133 (13%) Query: 370 DKLRLFCFRLR-KRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPS--- 425 DK++ R+ +++ SKL + + K T R H + S +L E+ PS Sbjct: 1768 DKVKALQKRVEDEQKGRSKLPIRVKGKEDVPKKTTHRPHPAASPSLKSERHAPGSPSPKT 1827 Query: 426 EASTTLPESHLKTPQMPPTTPSSS-------SFTKKDETHPGAQSSPANFRITSPTVAPP 478 E +TL S KT + PP +PSS S + K E H A SS + + P Sbjct: 1828 ERHSTLSSS-AKTERHPPVSPSSKTEKHSPVSPSAKTERHSPASSSSKTEKHS------P 1880 Query: 479 LSSDTSTNRHPAV 491 +S T T RH V Sbjct: 1881 VSPSTKTERHSPV 1893 Score = 29.3 bits (64), Expect = 8.5 Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 15/109 (13%) Query: 390 SEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEASTTLPESHLKTPQMPPTTPSSS 449 +E HS + T + S S S + P ++ P S KT + PP +PS Sbjct: 1851 TEKHSPVSPSAKTERHSPASSSSKTEKHSPVSPS-TKTERHSPVSSTKTERHPPVSPSG- 1908 Query: 450 SFTKKDETHPGAQSSPANFRITSPTVAP-------PLSSDTSTNRHPAV 491 K D+ P SP+ P V+P P+S T++H V Sbjct: 1909 ---KTDKRPP---VSPSGRTEKHPPVSPGRTEKRLPVSPSGRTDKHQPV 1951 >gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens] Length = 360 Score = 39.7 bits (91), Expect = 0.006 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 7/85 (8%) Query: 127 AKGAEETLGPQKRKKPSEEETG---TKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSS 183 A+GA +G +KR + G KR K S++ T +CSA ST+ GR + Sbjct: 120 ARGAMAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSA----STSQGRKASTAPGA 175 Query: 184 SAPPNTSSTESLKPLANRHATASKN 208 A P+ TE K A R +S + Sbjct: 176 EASPSPCITERSKQKARRRTRSSSS 200 Score = 32.0 bits (71), Expect = 1.3 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 104 SKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSC 163 S+K K+K + C+ S T++G + + P PS T + K ++ +TR S Sbjct: 144 SEKRKKKSRKDTSRNCSAS---TSQGRKASTAPGAEASPSPCITERSKQK-ARRRTRSSS 199 Query: 164 SAGASTSTAMGRSPPPQTSSSA 185 S+ +S+S++ S +SSS+ Sbjct: 200 SSSSSSSSSSSSSSSSSSSSSS 221 >gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] Length = 2639 Score = 38.1 bits (87), Expect = 0.018 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 3/77 (3%) Query: 419 SQHPKPSEASTTLPESHLKTP---QMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTV 475 +Q P P+ STT + TP Q P TTP +++ T P +P IT+ T Sbjct: 1538 TQTPTPTPISTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTVLITTTTT 1597 Query: 476 APPLSSDTSTNRHPAVP 492 P + TST P Sbjct: 1598 MTPTPTPTSTKSTTVTP 1614 Score = 35.0 bits (79), Expect = 0.16 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 3/77 (3%) Query: 419 SQHPKPSEASTTLPESHLKTP---QMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTV 475 +Q P P+ +TT + TP Q P TTP +++ T P +P IT+ T Sbjct: 1446 TQAPTPTAITTTSTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTPTAITTTTT 1505 Query: 476 APPLSSDTSTNRHPAVP 492 P + T T + P Sbjct: 1506 VTPTPTPTGTQTPTSTP 1522 Score = 34.7 bits (78), Expect = 0.20 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Query: 418 QSQHPKPSEASTTLPESHLKT-PQMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTVA 476 QS P P +TT+ + T Q P TTP +++ T P +P IT+ T Sbjct: 1332 QSTTPTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 1391 Query: 477 PPLSSDTSTNRHPAVP 492 P + T T + P Sbjct: 1392 TPTPTPTGTQTPTSTP 1407 Score = 32.7 bits (73), Expect = 0.77 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 3/77 (3%) Query: 419 SQHPKPSEASTTLPESHLKTP---QMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTV 475 +Q P + +TT + TP Q P TTP +++ T P +P + IT+ T Sbjct: 1354 TQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTSTPITTTTT 1413 Query: 476 APPLSSDTSTNRHPAVP 492 P + T T P Sbjct: 1414 VTPTPTPTGTQTPTTTP 1430 Score = 31.6 bits (70), Expect = 1.7 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 3/77 (3%) Query: 419 SQHPKPSEASTTLPESHLKTP---QMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTV 475 +Q P P+ +TT + TP Q P +TP +++ T P +P I++ T Sbjct: 1492 TQTPTPTAITTTTTVTPTPTPTGTQTPTSTPITTTTTVTPTPTPTGTQTPTPTPISTTTT 1551 Query: 476 APPLSSDTSTNRHPAVP 492 P + T T P Sbjct: 1552 VTPTPTPTGTQTPTTTP 1568 Score = 30.4 bits (67), Expect = 3.8 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 3/77 (3%) Query: 419 SQHPKPSEASTTLPESHLKTP---QMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTV 475 +Q P + +TT + TP Q P TTP +++ T P +P IT+ + Sbjct: 1400 TQTPTSTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQAPTPTAITTTST 1459 Query: 476 APPLSSDTSTNRHPAVP 492 P + T T P Sbjct: 1460 VTPTPTPTGTQTPTTTP 1476 Score = 30.0 bits (66), Expect = 5.0 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%) Query: 419 SQHPKPSEASTTLPESHLKTP---QMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTV 475 +Q P + +TT + TP Q P TP S++ T P +P IT+ T Sbjct: 1515 TQTPTSTPITTTTTVTPTPTPTGTQTPTPTPISTTTTVTPTPTPTGTQTPTTTPITTTTT 1574 Query: 476 APPLSSDTST 485 P + T T Sbjct: 1575 VTPTPTPTGT 1584 Score = 29.6 bits (65), Expect = 6.5 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 3/70 (4%) Query: 419 SQHPKPSEASTTLPESHLKTP---QMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTV 475 +Q P + +TT + TP Q P +TP +++ T P +P IT+ T Sbjct: 1377 TQTPTTTPITTTTTVTPTPTPTGTQTPTSTPITTTTTVTPTPTPTGTQTPTTTPITTTTT 1436 Query: 476 APPLSSDTST 485 P + T T Sbjct: 1437 VTPTPTPTGT 1446 >gi|6912458 calcineurin binding protein 1 [Homo sapiens] Length = 2220 Score = 38.1 bits (87), Expect = 0.018 Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 1/87 (1%) Query: 114 PATPACTPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAM 173 PA P C P+ GAE T + + +P G + S+ Q S AS+ Sbjct: 2046 PAEPHCWPAEAALGTGAEPTCSQEGKLRPEPRRDGEAQEAASETQPLSSPPTAASSKAPS 2105 Query: 174 GRSPPPQTSSSAPPNTSSTESLKPLAN 200 S P P S +S +PL N Sbjct: 2106 SGSAQPPEGHPGKPEPSRAKS-RPLPN 2131 >gi|238624188 diffuse panbronchiolitis critical region 1 protein [Homo sapiens] Length = 1393 Score = 37.4 bits (85), Expect = 0.031 Identities = 85/428 (19%), Positives = 152/428 (35%), Gaps = 40/428 (9%) Query: 63 GKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACTPS 122 G+ F E T T E+ +AN+ ++ P++ T+ +E A TP Sbjct: 683 GQRTPFANEKTTSSSAEPTEHGERTPLANENTTLS-----PAEPTENRE-RTANEKTTPF 736 Query: 123 NRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTS 182 + E T P++ R+ ++ E+T PS + + TS Sbjct: 737 PAEPTENRERTANENTTPSPAQPTENGDRTPLANEKTTPSLAEPTENGKRTPFANEKTTS 796 Query: 183 SSAPPNTSSTESLKPLANRHATAS-----KNIFREDPIIAMVLNATKVFKYESSENEQRR 237 SSA P + + PLAN + T+S +N R A ES+ NE+ Sbjct: 797 SSAEPTEHAERT--PLANENTTSSPAEPTENRERTANEKTTQFPAEPTENRESTANEKTT 854 Query: 238 MFHATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQT 297 F A ++ + ++ + + ++N S E E + ++T Sbjct: 855 PFPAEPTENREWTANENTTLSPAEPTEHEEMTPLANEKTTLSPAEPTENGERTPFTNEKT 914 Query: 298 FEVPKDIIRRAKKIPKIN-ILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVV 356 + ++ P N I + +G +I N K T + V Sbjct: 915 TPSSAEPTEHGERTPLANEITTPSRAEPTEHG-----ERIANEKATPSPAKPTEHGETTV 969 Query: 357 GKGECHNI--PCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMAL 414 + + P E G++ L EN + +E +R+ + ++ Sbjct: 970 NEDTTPSSAEPTENGERTPL------ANENTTTSPTE-------STEHGERTANEKTTPS 1016 Query: 415 PQEQSQHPK--PSEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHP---GAQSSPANFR 469 P E ++H + PS T+P S K + TPS++ T P G +++ AN + Sbjct: 1017 PAEPTEHGERTPSANEKTIP-SPAKPTEHEEMTPSANENTTPSPVKPTEHGEKTTLANEK 1075 Query: 470 ITSPTVAP 477 IT P Sbjct: 1076 ITLSPEGP 1083 Score = 35.8 bits (81), Expect = 0.091 Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 2/87 (2%) Query: 120 TPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPP 179 TPS + E T + P+E R+ ++ E+T PS + + Sbjct: 534 TPSPAEPTENRERTANEKTTPSPAEPTENGDRTPLANEKTTPSLAEPTENGQRTPFANEK 593 Query: 180 QTSSSAPPNTSSTESLKPLANRHATAS 206 TSSSA P + E PLAN + T S Sbjct: 594 TTSSSAEP--TEHEERTPLANENTTPS 618 Score = 30.8 bits (68), Expect = 2.9 Identities = 25/119 (21%), Positives = 51/119 (42%), Gaps = 2/119 (1%) Query: 81 TLKREKLKVANKIESIPVKGIIPSKKTK--QKEVYPATPACTPSNRLTAKGAEETLGPQK 138 T R++ AN I P + I +K+T +++ T T T E+T + Sbjct: 1126 TEHRDRATSANVITPAPAEPIKHAKRTTLAHEKMTQVTEKSTEHPEKTTSTTEKTTRTPE 1185 Query: 139 RKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKP 197 + E+T + K + +P+ + G +T T P +++ + + T+++KP Sbjct: 1186 KPTLYSEKTICTKGKNTPVPEKPTENLGNTTLTTETIKAPVKSTENPEKTAAVTKTIKP 1244 >gi|239740773 PREDICTED: similar to diffuse panbronchiolitis critical region 1 [Homo sapiens] Length = 1400 Score = 37.4 bits (85), Expect = 0.031 Identities = 34/144 (23%), Positives = 55/144 (38%), Gaps = 8/144 (5%) Query: 63 GKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACTPS 122 G+ F E T T E+ +AN+ ++ G +++ E PA Sbjct: 745 GQRTPFANEKTTSSSAEPTEHGERTPLANENTTLSPAGPTENRERTANEKTTPFPAEPTE 804 Query: 123 NRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTS 182 NR E T P++ R+ ++ E+T PS + + TS Sbjct: 805 NR------ERTANENTTPSPAQPTENGDRTPLANEKTTPSLAEPTENGKRTPFANEKTTS 858 Query: 183 SSAPPNTSSTESLKPLANRHATAS 206 SSA P + + PLAN + T+S Sbjct: 859 SSAEPTEHAERT--PLANENTTSS 880 Score = 36.6 bits (83), Expect = 0.053 Identities = 48/205 (23%), Positives = 80/205 (39%), Gaps = 37/205 (18%) Query: 120 TPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPP 179 TPS + E T + P+E R+ ++ E+T PS + + Sbjct: 596 TPSPAEPTENRERTANEKTTPSPAEPTENGDRTPLANEKTTPSLAEPTENGQRTPFANEK 655 Query: 180 QTSSSAPP----------NTSSTES-LKPLANRHATASKNIFRE--DPIIAMVLNA---T 223 TSSSA P N ++T S +P NR TA++N P + A T Sbjct: 656 TTSSSAEPTEHEERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENREMTANEKT 715 Query: 224 KVFKYESSENEQRRMFHATVAT---------QTQFFHVKVLNINLKRKFIKKRIIIISNY 274 +F E +EN +R T ++ +T F + K + + + + + Sbjct: 716 TLFPAEPTENRERTANEKTTSSPAEPTENGQRTPFANEKTTSSSAEP----------TEH 765 Query: 275 SKRNSLLEVNEASSVSEAGPDQTFE 299 +R L NE +++S AGP + E Sbjct: 766 GERTPL--ANENTTLSPAGPTENRE 788 >gi|28559039 mediator complex subunit 1 [Homo sapiens] Length = 1581 Score = 37.4 bits (85), Expect = 0.031 Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 12/113 (10%) Query: 74 TLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEET 133 T GDL + ++++K N + + G P +K P + TPSN +K Sbjct: 959 TTGDLGKEKTQKRVKEGNGTSNSTLSG--PGLDSK-----PGKRSRTPSNDGKSKDK--- 1008 Query: 134 LGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAP 186 P KRKK E S ++ T P+ + G+ + + GRS P ++ P Sbjct: 1009 --PPKRKKADTEGKSPSHSSSNRPFTPPTSTGGSKSPGSAGRSQTPPGVATPP 1059 >gi|146219843 Snf2-related CBP activator protein [Homo sapiens] Length = 3230 Score = 37.4 bits (85), Expect = 0.031 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 5/97 (5%) Query: 396 IQIQKNTNQRSHDSRSMALPQEQSQHPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKD 455 ++ Q+ N R + L + + + P E +LP L+ P P TPSS +D Sbjct: 305 VEEQQEGNDAEAQRREIELLRREGELPL-EELLRSLPPQLLEGPSSPSQTPSSHDSDTRD 363 Query: 456 ETHPGAQSSPANFRITSPTVAPPLSSDTSTNRHPAVP 492 GA+ P + PP S+ T N+ P P Sbjct: 364 GPEEGAEEEPPQVL----EIKPPPSAVTQRNKQPWHP 396 >gi|22547219 Toll-interleukin 1 receptor domain-containing adaptor protein isoform b [Homo sapiens] Length = 235 Score = 37.0 bits (84), Expect = 0.041 Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 411 SMALPQEQSQHPKP-SEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFR 469 S +LP S+ KP + + ++ LK P+ P +P S+S T + P+ Sbjct: 4 STSLPAPGSRPKKPLGKMADWFRQTLLKKPKKRPNSPESTSSDASQPTSQDSPLPPSLSS 63 Query: 470 ITSPTVAPPLSSDTSTNR 487 +TSP++ P +SD+ ++R Sbjct: 64 VTSPSLPPTHASDSGSSR 81 >gi|89111122 Toll-interleukin 1 receptor domain-containing adaptor protein isoform a [Homo sapiens] Length = 221 Score = 37.0 bits (84), Expect = 0.041 Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 411 SMALPQEQSQHPKP-SEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFR 469 S +LP S+ KP + + ++ LK P+ P +P S+S T + P+ Sbjct: 4 STSLPAPGSRPKKPLGKMADWFRQTLLKKPKKRPNSPESTSSDASQPTSQDSPLPPSLSS 63 Query: 470 ITSPTVAPPLSSDTSTNR 487 +TSP++ P +SD+ ++R Sbjct: 64 VTSPSLPPTHASDSGSSR 81 >gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] Length = 1020 Score = 36.6 bits (83), Expect = 0.053 Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 15/117 (12%) Query: 70 KEIPTLGDLAETLK-REKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACTPSNRLTAK 128 KE P ++ E K +EK +VA K E K PSK ++KE P K Sbjct: 908 KEAPAKVEVKEDAKPKEKTEVAKK-EPDDAKAKEPSKPAEKKEAAP-----------EKK 955 Query: 129 GAEETLGPQKRKKPSEEETGTKRSK-MSKEQTRPSC-SAGASTSTAMGRSPPPQTSS 183 +E + +KP E + K +SKE ++P A S+ST S PP+ ++ Sbjct: 956 DTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKAT 1012 Score = 34.7 bits (78), Expect = 0.20 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 10/119 (8%) Query: 79 AETLKREKLKVANKIESIPVKGIIPSK-KTKQKEVYPATPACTPSNRLTAKGAEETLGPQ 137 A++ ++E+ K +++S P K K+ KE + P + AK E P+ Sbjct: 530 AKSPEKEEAKSPAEVKS-------PEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPE 582 Query: 138 KRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLK 196 K K P++EE + S E+ + A S A +SP + + S P S E K Sbjct: 583 KAKSPAKEEAKSPAEAKSPEKAKSPVKEEAK-SPAEAKSPVKEEAKS-PAEVKSPEKAK 639 Score = 32.3 bits (72), Expect = 1.0 Identities = 30/120 (25%), Positives = 42/120 (35%), Gaps = 2/120 (1%) Query: 79 AETLKREKLKVANKIES-IPVKGIIPSK-KTKQKEVYPATPACTPSNRLTAKGAEETLGP 136 AE EK K K E+ P + P K K+ KE + + AK E P Sbjct: 576 AEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSP 635 Query: 137 QKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLK 196 +K K P++EE + S E+ A + P + S S E K Sbjct: 636 EKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAK 695 Score = 32.0 bits (71), Expect = 1.3 Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 2/90 (2%) Query: 114 PATPACTPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAM 173 PA A +P + EE P + K P +EE + S E+ + A S Sbjct: 505 PAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAK-SPPE 563 Query: 174 GRSPPPQTSSSAPPNTSSTESLKPLANRHA 203 +SP + + S P S E K A A Sbjct: 564 AKSPEKEEAKS-PAEVKSPEKAKSPAKEEA 592 Score = 30.0 bits (66), Expect = 5.0 Identities = 39/158 (24%), Positives = 55/158 (34%), Gaps = 12/158 (7%) Query: 79 AETLKREKLKVANKIES-IPVKGIIPSK---KTKQKEVYPATPACTPSNRLTAKGAEETL 134 AE EK K K E+ P K P K K+ +K P + + EE Sbjct: 672 AEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAK 731 Query: 135 GPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAM---GRSP----PPQTSSSAPP 187 P+K K P +EE + S E+ + T RSP P + S Sbjct: 732 TPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKE 791 Query: 188 NTSSTESLK-PLANRHATASKNIFREDPIIAMVLNATK 224 S E K PL K I +++ + + V K Sbjct: 792 EVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEK 829 Score = 30.0 bits (66), Expect = 5.0 Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 10/80 (12%) Query: 84 REKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACT----------PSNRLTAKGAEET 133 +E K A K E+ P K +K K+ E P T A PS K + + Sbjct: 939 KEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSS 998 Query: 134 LGPQKRKKPSEEETGTKRSK 153 QK KP E+ T K +K Sbjct: 999 STDQKDSKPPEKATEDKAAK 1018 Score = 29.6 bits (65), Expect = 6.5 Identities = 22/96 (22%), Positives = 35/96 (36%), Gaps = 4/96 (4%) Query: 103 PSKKTKQ--KEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTR 160 P K+ K KE + + AK E P+K K P++EE K +K + Sbjct: 512 PEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEE--AKSPPEAKSPEK 569 Query: 161 PSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLK 196 + A + P + + +P S E K Sbjct: 570 EEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAK 605 >gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e [Homo sapiens] Length = 1451 Score = 36.6 bits (83), Expect = 0.053 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 6/132 (4%) Query: 84 REKLKVANKIESIPVKGIIPSKKTKQKEVYPATPA---CTPSNRLTAKGAEETLGPQKRK 140 R ++K + KI + P+K T K PA P S K E++ + Sbjct: 288 RSQVKASEKILQVRAASA-PAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEES 346 Query: 141 KPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLAN 200 SEEET ++ + + + + GA+++ A + P + ++ APP + K A Sbjct: 347 SDSEEETPAAKALLQAKASGKTSQVGAASAPA--KESPRKGAAPAPPGKTGPAVAKAQAG 404 Query: 201 RHATASKNIFRE 212 + S++ E Sbjct: 405 KREEDSQSSSEE 416 Score = 32.0 bits (71), Expect = 1.3 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 9/92 (9%) Query: 97 PVKGIIPSKKTKQKEVYPATPACTPS-NRLTAKGAEETLGPQKRKKPSEEETGTKRSKMS 155 P K P + + V PA PS + A A+ GP++ SEEE+ ++ + Sbjct: 824 PSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDSGSSEEESDSEEEAET 883 Query: 156 KEQTRPS--------CSAGASTSTAMGRSPPP 179 Q +PS A A S G +P P Sbjct: 884 LAQVKPSGKTHQIRAALAPAKESPRKGAAPTP 915 Score = 30.4 bits (67), Expect = 3.8 Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 15/144 (10%) Query: 85 EKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSE 144 ++ V K P + S TK+ A PA +T + L P KR K E Sbjct: 208 DETDVEGKPSVKPAQVKASSVSTKESPARKAAPAPGKVGDVTPQVKGGALPPAKRAKKPE 267 Query: 145 EETGTKRSKMSKEQTRPSCSAG----------ASTSTAMGRSPPPQTSSSAPPN-----T 189 EE+ + E+ P+ + ++A + P + ++ APP Sbjct: 268 EESESSEEGSESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVA 327 Query: 190 SSTESLKPLANRHATASKNIFRED 213 S T++ KP + +++ ++ E+ Sbjct: 328 SQTKAGKPEEDSESSSEESSDSEE 351 Score = 30.4 bits (67), Expect = 3.8 Identities = 30/124 (24%), Positives = 46/124 (37%), Gaps = 11/124 (8%) Query: 103 PSKKTKQKEVYPATPACTPSNRLTAKGA--EETLGPQKRKKPSEEETGTKRSKMSKEQTR 160 P+K++ +K PA P T A+ EE + SEEE + K Sbjct: 377 PAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQV 436 Query: 161 PSCSAGASTSTAMGRSPPP---------QTSSSAPPNTSSTESLKPLANRHATASKNIFR 211 + SA A S G +P P Q S + S + ++R A A+ N + Sbjct: 437 RAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQ 496 Query: 212 EDPI 215 P+ Sbjct: 497 VKPL 500 >gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d [Homo sapiens] Length = 1488 Score = 36.6 bits (83), Expect = 0.053 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 6/132 (4%) Query: 84 REKLKVANKIESIPVKGIIPSKKTKQKEVYPATPA---CTPSNRLTAKGAEETLGPQKRK 140 R ++K + KI + P+K T K PA P S K E++ + Sbjct: 288 RSQVKASEKILQVRAASA-PAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEES 346 Query: 141 KPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLAN 200 SEEET ++ + + + + GA+++ A + P + ++ APP + K A Sbjct: 347 SDSEEETPAAKALLQAKASGKTSQVGAASAPA--KESPRKGAAPAPPGKTGPAVAKAQAG 404 Query: 201 RHATASKNIFRE 212 + S++ E Sbjct: 405 KREEDSQSSSEE 416 Score = 32.0 bits (71), Expect = 1.3 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 9/92 (9%) Query: 97 PVKGIIPSKKTKQKEVYPATPACTPS-NRLTAKGAEETLGPQKRKKPSEEETGTKRSKMS 155 P K P + + V PA PS + A A+ GP++ SEEE+ ++ + Sbjct: 824 PSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDSGSSEEESDSEEEAET 883 Query: 156 KEQTRPS--------CSAGASTSTAMGRSPPP 179 Q +PS A A S G +P P Sbjct: 884 LAQVKPSGKTHQIRAALAPAKESPRKGAAPTP 915 Score = 30.4 bits (67), Expect = 3.8 Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 15/144 (10%) Query: 85 EKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSE 144 ++ V K P + S TK+ A PA +T + L P KR K E Sbjct: 208 DETDVEGKPSVKPAQVKASSVSTKESPARKAAPAPGKVGDVTPQVKGGALPPAKRAKKPE 267 Query: 145 EETGTKRSKMSKEQTRPSCSAG----------ASTSTAMGRSPPPQTSSSAPPN-----T 189 EE+ + E+ P+ + ++A + P + ++ APP Sbjct: 268 EESESSEEGSESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVA 327 Query: 190 SSTESLKPLANRHATASKNIFRED 213 S T++ KP + +++ ++ E+ Sbjct: 328 SQTKAGKPEEDSESSSEESSDSEE 351 Score = 30.4 bits (67), Expect = 3.8 Identities = 30/124 (24%), Positives = 46/124 (37%), Gaps = 11/124 (8%) Query: 103 PSKKTKQKEVYPATPACTPSNRLTAKGA--EETLGPQKRKKPSEEETGTKRSKMSKEQTR 160 P+K++ +K PA P T A+ EE + SEEE + K Sbjct: 377 PAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQV 436 Query: 161 PSCSAGASTSTAMGRSPPP---------QTSSSAPPNTSSTESLKPLANRHATASKNIFR 211 + SA A S G +P P Q S + S + ++R A A+ N + Sbjct: 437 RAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQ 496 Query: 212 EDPI 215 P+ Sbjct: 497 VKPL 500 >gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a [Homo sapiens] Length = 1450 Score = 36.6 bits (83), Expect = 0.053 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 6/132 (4%) Query: 84 REKLKVANKIESIPVKGIIPSKKTKQKEVYPATPA---CTPSNRLTAKGAEETLGPQKRK 140 R ++K + KI + P+K T K PA P S K E++ + Sbjct: 288 RSQVKASEKILQVRAASA-PAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEES 346 Query: 141 KPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLAN 200 SEEET ++ + + + + GA+++ A + P + ++ APP + K A Sbjct: 347 SDSEEETPAAKALLQAKASGKTSQVGAASAPA--KESPRKGAAPAPPGKTGPAVAKAQAG 404 Query: 201 RHATASKNIFRE 212 + S++ E Sbjct: 405 KREEDSQSSSEE 416 Score = 32.0 bits (71), Expect = 1.3 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 9/92 (9%) Query: 97 PVKGIIPSKKTKQKEVYPATPACTPS-NRLTAKGAEETLGPQKRKKPSEEETGTKRSKMS 155 P K P + + V PA PS + A A+ GP++ SEEE+ ++ + Sbjct: 824 PSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDSGSSEEESDSEEEAET 883 Query: 156 KEQTRPS--------CSAGASTSTAMGRSPPP 179 Q +PS A A S G +P P Sbjct: 884 LAQVKPSGKTHQIRAALAPAKESPRKGAAPTP 915 Score = 30.4 bits (67), Expect = 3.8 Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 15/144 (10%) Query: 85 EKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSE 144 ++ V K P + S TK+ A PA +T + L P KR K E Sbjct: 208 DETDVEGKPSVKPAQVKASSVSTKESPARKAAPAPGKVGDVTPQVKGGALPPAKRAKKPE 267 Query: 145 EETGTKRSKMSKEQTRPSCSAG----------ASTSTAMGRSPPPQTSSSAPPN-----T 189 EE+ + E+ P+ + ++A + P + ++ APP Sbjct: 268 EESESSEEGSESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVA 327 Query: 190 SSTESLKPLANRHATASKNIFRED 213 S T++ KP + +++ ++ E+ Sbjct: 328 SQTKAGKPEEDSESSSEESSDSEE 351 Score = 30.4 bits (67), Expect = 3.8 Identities = 30/124 (24%), Positives = 46/124 (37%), Gaps = 11/124 (8%) Query: 103 PSKKTKQKEVYPATPACTPSNRLTAKGA--EETLGPQKRKKPSEEETGTKRSKMSKEQTR 160 P+K++ +K PA P T A+ EE + SEEE + K Sbjct: 377 PAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQV 436 Query: 161 PSCSAGASTSTAMGRSPPP---------QTSSSAPPNTSSTESLKPLANRHATASKNIFR 211 + SA A S G +P P Q S + S + ++R A A+ N + Sbjct: 437 RAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQ 496 Query: 212 EDPI 215 P+ Sbjct: 497 VKPL 500 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.312 0.127 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,996,225 Number of Sequences: 37866 Number of extensions: 909907 Number of successful extensions: 7944 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 253 Number of HSP's that attempted gapping in prelim test: 6383 Number of HSP's gapped (non-prelim): 1706 length of query: 492 length of database: 18,247,518 effective HSP length: 106 effective length of query: 386 effective length of database: 14,233,722 effective search space: 5494216692 effective search space used: 5494216692 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.