Search of human proteins with 38569396

Search of human proteins with 38569396

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|38569396 insulin-like 6 precursor [Homo sapiens]
         (213 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|38569396 insulin-like 6 precursor [Homo sapiens]                   439   e-124
gi|5902052 relaxin 1 preproprotein [Homo sapiens]                      55   3e-08
gi|20143933 relaxin 2 isoform 1 preproprotein [Homo sapiens]           51   6e-07
gi|20143935 relaxin 2 isoform 2 [Homo sapiens]                         44   1e-04
gi|60097902 filaggrin [Homo sapiens]                                   32   0.40 
gi|38327535 insulin-like 3 precursor [Homo sapiens]                    32   0.40 
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li...    32   0.52 
gi|27883882 P18SRP protein [Homo sapiens]                              31   0.89 
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li...    29   3.4  
gi|221139764 PHD and ring finger domains 1 [Homo sapiens]              29   3.4  
gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens]       29   3.4  
gi|88758565 potassium voltage-gated channel, shaker-related subf...    28   4.4  
gi|239757043 PREDICTED: functional smad suppressing element 18 [...    28   5.8  
gi|169203021 PREDICTED: similar to Shank2E [Homo sapiens]              28   5.8  
gi|239752551 PREDICTED: hypothetical protein [Homo sapiens]            28   5.8  
gi|239751555 PREDICTED: functional smad suppressing element 18 [...    28   5.8  
gi|239746067 PREDICTED: functional smad suppressing element 18 [...    28   5.8  
gi|226817313 SH3 and multiple ankyrin repeat domains 2 isoform 1...    28   5.8  
gi|18254464 relaxin 3 preproprotein [Homo sapiens]                     28   5.8  
gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]                         28   5.8  
gi|46048234 nucleolar protein 8 [Homo sapiens]                         28   5.8  
gi|5032143 TBP-associated factor 1A isoform 1 [Homo sapiens]           28   7.6  
gi|21536362 TBP-associated factor 1A isoform 2 [Homo sapiens]          28   7.6  
gi|188595682 ankyrin 2 isoform 3 [Homo sapiens]                        28   7.6  
gi|52426737 ankyrin 2 isoform 2 [Homo sapiens]                         28   7.6  
gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]                         28   7.6  
gi|145580608 WD repeat domain 62 isoform 1 [Homo sapiens]              28   7.6  
gi|145580610 WD repeat domain 62 isoform 2 [Homo sapiens]              28   7.6  
gi|149944593 hypothetical protein LOC23349 [Homo sapiens]              28   7.6  
gi|18158228 zinc finger protein 280A [Homo sapiens]                    28   7.6  

>gi|38569396 insulin-like 6 precursor [Homo sapiens]
          Length = 213

 Score =  439 bits (1129), Expect = e-124
 Identities = 213/213 (100%), Positives = 213/213 (100%)

Query: 1   MPRLLRLSLLWLGLLLVRFSRELSDISSARKLCGRYLVKEIEKLCGHANWSQFRFEEETP 60
           MPRLLRLSLLWLGLLLVRFSRELSDISSARKLCGRYLVKEIEKLCGHANWSQFRFEEETP
Sbjct: 1   MPRLLRLSLLWLGLLLVRFSRELSDISSARKLCGRYLVKEIEKLCGHANWSQFRFEEETP 60

Query: 61  FSRLIAQASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAVNSWEMQSLPEYKDKK 120
           FSRLIAQASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAVNSWEMQSLPEYKDKK
Sbjct: 61  FSRLIAQASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAVNSWEMQSLPEYKDKK 120

Query: 121 GYSPLGKTREFSSSHNINVYIHENAKFQKKRRNKIKTLSNLFWGHHPQRKRRGYSEKCCL 180
           GYSPLGKTREFSSSHNINVYIHENAKFQKKRRNKIKTLSNLFWGHHPQRKRRGYSEKCCL
Sbjct: 121 GYSPLGKTREFSSSHNINVYIHENAKFQKKRRNKIKTLSNLFWGHHPQRKRRGYSEKCCL 180

Query: 181 TGCTKEELSIACLPYIDFKRLKEKRSSLVTKIY 213
           TGCTKEELSIACLPYIDFKRLKEKRSSLVTKIY
Sbjct: 181 TGCTKEELSIACLPYIDFKRLKEKRSSLVTKIY 213


>gi|5902052 relaxin 1 preproprotein [Homo sapiens]
          Length = 185

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 59/213 (27%), Positives = 81/213 (38%), Gaps = 49/213 (23%)

Query: 1   MPRLLRLSLLWLGLLLVRFSRELSDI--SSARKLCGRYLVKEIEKLCGHANWSQFRFEEE 58
           MPRL    LL   LLL +FSR ++        KLCGR LV+    +CG + WS+    +E
Sbjct: 1   MPRLFLFHLLEFCLLLNQFSRAVAAKWKDDVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60

Query: 59  TPFSRLIAQASEKVEAYSPYQFESPQTASPAR-------GRGTNPVSTSWEEAVN----- 106
                                 ++PQT  P          + T  +    E   N     
Sbjct: 61  ----------------------DAPQTPRPVAEIVPSFINKDTETIIIMLEFIANLPPEL 98

Query: 107 ----SWEMQSLPEYKDKKGYSPLGKTREFSSSHNINVYIHENAKFQKKRRNKIKTLSNLF 162
               S    SLPE +    Y P  K    S      +  +  ++      +++K L    
Sbjct: 99  KAALSERQPSLPELQQ---YVPALKDSNLSFEEFKKLIRNRQSEAADSNPSELKYLG--- 152

Query: 163 WGHHPQRKRRGYS---EKCCLTGCTKEELSIAC 192
              H Q+KRR Y    EKCCL GCTK  L+  C
Sbjct: 153 LDTHSQKKRRPYVALFEKCCLIGCTKRSLAKYC 185


>gi|20143933 relaxin 2 isoform 1 preproprotein [Homo sapiens]
          Length = 185

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 58/212 (27%), Positives = 87/212 (41%), Gaps = 47/212 (22%)

Query: 1   MPRLLRLSLLWLGLLLVRFSRELSD--ISSARKLCGRYLVKEIEKLCGHANWSQFRFEEE 58
           MPRL    LL + LLL +FSR ++D  +    KLCGR LV+    +CG + WS+    +E
Sbjct: 1   MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60

Query: 59  ----TP------FSRLIAQASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAVNSW 108
               TP          I + +E +   S +    PQ                 E  +   
Sbjct: 61  DAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQ-----------------ELKLTLS 103

Query: 109 EMQSLPEYKDKKGYSPLGKTREFSSSHNINVYIHENAKFQKKRRNKI-----KTLSNLFW 163
           EMQ  P     + + P+ K        + ++   E  K  + R+++        L  L  
Sbjct: 104 EMQ--PALPQLQQHVPVLK--------DSSLLFEEFKKLIRNRQSEAADSSPSELKYLGL 153

Query: 164 GHHPQRKRRGYS---EKCCLTGCTKEELSIAC 192
             H ++KR+ YS    KCC  GCTK  L+  C
Sbjct: 154 DTHSRKKRQLYSALANKCCHVGCTKRSLARFC 185


>gi|20143935 relaxin 2 isoform 2 [Homo sapiens]
          Length = 117

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 2/60 (3%)

Query: 1  MPRLLRLSLLWLGLLLVRFSRELSD--ISSARKLCGRYLVKEIEKLCGHANWSQFRFEEE 58
          MPRL    LL + LLL +FSR ++D  +    KLCGR LV+    +CG + WS+    +E
Sbjct: 1  MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60


>gi|60097902 filaggrin [Homo sapiens]
          Length = 4061

 Score = 32.0 bits (71), Expect = 0.40
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 12/94 (12%)

Query: 67  QASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAVNSWEMQSLPEYKDKKGYSPLG 126
           Q   K     P   E        +GR  +P  T  +        +S  E K++KGYSP  
Sbjct: 115 QEENKENRKRPSSLERRNNRKGNKGRSKSPRETGGKRH------ESSSEKKERKGYSPTH 168

Query: 127 KTREFSSSHNINVYIHENAKFQKKRRNKIKTLSN 160
           +  E+  +H      H ++K +K +    +   N
Sbjct: 169 REEEYGKNH------HNSSKKEKNKTENTRLGDN 196


>gi|38327535 insulin-like 3 precursor [Homo sapiens]
          Length = 131

 Score = 32.0 bits (71), Expect = 0.40
 Identities = 17/50 (34%), Positives = 24/50 (48%)

Query: 2  PRLLRLSLLWLGLLLVRFSRELSDISSARKLCGRYLVKEIEKLCGHANWS 51
          PRL   +L+ LG  LV             KLCG + V+ + ++CG   WS
Sbjct: 3  PRLPAWALVLLGPALVFALGPAPTPEMREKLCGHHFVRALVRVCGGPRWS 52



 Score = 28.1 bits (61), Expect = 5.8
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 4/34 (11%)

Query: 165 HHPQRKRRGYSEK---CCLTGCTKEELSIACLPY 195
           HH +  R   +     CCL+GCT+++L   C PY
Sbjct: 99  HHHRHHRAAATNPARYCCLSGCTQQDLLTLC-PY 131


>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
           [Homo sapiens]
          Length = 899

 Score = 31.6 bits (70), Expect = 0.52
 Identities = 24/111 (21%), Positives = 38/111 (34%), Gaps = 6/111 (5%)

Query: 67  QASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAVNSWEMQSLPEYKDKKGYSPLG 126
           +  EK++      +E  +       +        WE+    WE Q LPE K+K       
Sbjct: 614 EQEEKMQEQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEKMWEQQRLPEQKEKLWEHE-- 671

Query: 127 KTREFSSSHNINVYIHENAKFQKKRRNKIKTLSNLFWGHHPQRKRRGYSEK 177
           K +E          I E  K +KK + + K      W     R+     E+
Sbjct: 672 KMQEQEKMQEQEEKIWEQEKMEKKTQEQEKKT----WDQEKMREEESMRER 718



 Score = 28.9 bits (63), Expect = 3.4
 Identities = 13/53 (24%), Positives = 20/53 (37%)

Query: 67  QASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAVNSWEMQSLPEYKDK 119
           Q  E++        E  +T      +        WE+    W+ Q LPE K+K
Sbjct: 447 QEEERIREREKKMREEEETMREQEEKMQKQEENMWEQEEKEWQQQRLPEQKEK 499



 Score = 28.1 bits (61), Expect = 5.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)

Query: 101 WEEAVNSWEMQSLPEYKDK 119
           WE+    WE Q LPE K+K
Sbjct: 758 WEQEEKMWEQQRLPEQKEK 776


>gi|27883882 P18SRP protein [Homo sapiens]
          Length = 155

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 21/83 (25%), Positives = 35/83 (42%)

Query: 95  NPVSTSWEEAVNSWEMQSLPEYKDKKGYSPLGKTREFSSSHNINVYIHENAKFQKKRRNK 154
           N +    E+ +N  E +   + K+K       K    SSS   +    +  K+QKK + K
Sbjct: 60  NKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKK 119

Query: 155 IKTLSNLFWGHHPQRKRRGYSEK 177
            K   +    HH + K++   EK
Sbjct: 120 EKKSKSKKGKHHKKEKKKRKKEK 142


>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
           [Homo sapiens]
          Length = 828

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 13/53 (24%), Positives = 20/53 (37%)

Query: 67  QASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAVNSWEMQSLPEYKDK 119
           Q  E++        E  +T      +        WE+    W+ Q LPE K+K
Sbjct: 389 QEEERIREREKKMREEEETMREQEEKMQKQEENMWEQEEKEWQQQRLPEQKEK 441


>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
          Length = 1648

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 3/100 (3%)

Query: 21   RELSDISSARKLCGRYLVKEIEKLCGHANWSQFRFEEETPFSRLIAQASEKVEAYSPYQF 80
            R  SD SS+R+   R   K+  +      W   R    T  SR  +  S   E Y   + 
Sbjct: 1052 RSSSDRSSSRERAKRKKAKDKSREHRRGPWGHSR---RTSRSRSGSPGSSSYEHYESRKK 1108

Query: 81   ESPQTASPARGRGTNPVSTSWEEAVNSWEMQSLPEYKDKK 120
            +  ++AS  RGR  +P S+      +  + +   E  D+K
Sbjct: 1109 KKRRSASRPRGRECSPTSSLERLCRHKHQRERSHERPDRK 1148


>gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens]
          Length = 434

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 9/87 (10%)

Query: 41  IEKLCGHAN-WSQFRFEEETPFSR----LIAQASEKVEAYSPYQFESPQTASPARGRGTN 95
           I + CG  N W++ R+ E    +     ++ + +E  +    +Q           G GT 
Sbjct: 91  ISRQCGAGNNWAKGRYTEGAELTESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL 150

Query: 96  PVSTSWEE----AVNSWEMQSLPEYKD 118
            +S  WEE     +N+  +  LP+  D
Sbjct: 151 LISKIWEEYPDRIINTLSILLLPKVSD 177


>gi|88758565 potassium voltage-gated channel, shaker-related
           subfamily, member 3 [Homo sapiens]
          Length = 575

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 80  FESPQTASPARGRGTNPVSTSWEEAVNSWEMQSLPEYKDKKGYSPLGKTREFSSSHN 136
           FE P+++ PARG     V       V  + +++LPE++D+K Y        F ++ N
Sbjct: 224 FEYPESSGPARGIAIVSVLVILISIV-IFCLETLPEFRDEKDYPASTSQDSFEAAGN 279


>gi|239757043 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 996

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 21/153 (13%)

Query: 62  SRLIAQASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAVNSWEMQSLPEYKDKKG 121
           SRL+ +  +  +  S      P   +P +  G    S+S    V+   ++  P YKD + 
Sbjct: 817 SRLLQEDGKLGDPGSDLPPPPPPPLAPQKASGGG--SSSPGSPVHHPSLEEQPSYKDSQ- 873

Query: 122 YSPLGKTREFSSSHNINVYIHENAKFQKKRRNKIKTLSNL------FW----GHHPQRKR 171
                KT+E   ++ + V   ++  F  K +     +++       FW    G H Q   
Sbjct: 874 -----KTKE---NNQVIVSTKDDNSFSDKNKEHSFFITDSDASGGDFWRERSGEHTQETN 925

Query: 172 RGYSEKCCLTGCTKEELSIACLPYIDFKRLKEK 204
             +S K  +    KEEL       ID +R  E+
Sbjct: 926 SPHSLKKDVENMGKEELQKVLFEQIDLRRRLEQ 958


>gi|169203021 PREDICTED: similar to Shank2E [Homo sapiens]
          Length = 385

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 34/129 (26%), Positives = 52/129 (40%), Gaps = 18/129 (13%)

Query: 37  LVKEIEKLCGHANWSQFRFEE--ETPFSRLIAQASEKVE---------AYSPYQFESPQT 85
           LV++I K+        F   E  ETP + L AQ  + VE         A+  ++ +   T
Sbjct: 175 LVEKITKMLDRGLDPNFHDPETGETPLT-LAAQLDDSVEVIKALKNGGAHLDFRAKDGMT 233

Query: 86  ASPARGRGTNPVSTSWEEAVNSWEMQSLPEYKDKKGYSPLGKTREFSSS-HNINVYIHEN 144
           A     R  N V+          E+ + P+YKD  G +PL  T       +   + +HE+
Sbjct: 234 ALHKAARARNQVALK-----TLLELGASPDYKDSYGLTPLYHTAIVGGDPYCCELLLHEH 288

Query: 145 AKFQKKRRN 153
           A    K  N
Sbjct: 289 ATVCCKDEN 297


>gi|239752551 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 238

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)

Query: 101 WEEAVNSWEMQSLPEYKDK 119
           WE+    WE Q LPE K+K
Sbjct: 64  WEQEEKMWEQQRLPEQKEK 82


>gi|239751555 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 1252

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 21/153 (13%)

Query: 62  SRLIAQASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAVNSWEMQSLPEYKDKKG 121
           SRL+ +  +  +  S      P   +P +  G    S+S    V+   ++  P YKD + 
Sbjct: 817 SRLLQEDGKLGDPGSDLPPPPPPPLAPQKASGGG--SSSPGSPVHHPSLEEQPSYKDSQ- 873

Query: 122 YSPLGKTREFSSSHNINVYIHENAKFQKKRRNKIKTLSNL------FW----GHHPQRKR 171
                KT+E   ++ + V   ++  F  K +     +++       FW    G H Q   
Sbjct: 874 -----KTKE---NNQVIVSTKDDNSFSDKNKEHSFFITDSDASGGDFWRERSGEHTQETN 925

Query: 172 RGYSEKCCLTGCTKEELSIACLPYIDFKRLKEK 204
             +S K  +    KEEL       ID +R  E+
Sbjct: 926 SPHSLKKDVENMGKEELQKVLFEQIDLRRRLEQ 958


>gi|239746067 PREDICTED: functional smad suppressing element 18
           [Homo sapiens]
          Length = 1252

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 21/153 (13%)

Query: 62  SRLIAQASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAVNSWEMQSLPEYKDKKG 121
           SRL+ +  +  +  S      P   +P +  G    S+S    V+   ++  P YKD + 
Sbjct: 817 SRLLQEDGKLGDPGSDLPPPPPPPLAPQKASGGG--SSSPGSPVHHPSLEEQPSYKDSQ- 873

Query: 122 YSPLGKTREFSSSHNINVYIHENAKFQKKRRNKIKTLSNL------FW----GHHPQRKR 171
                KT+E   ++ + V   ++  F  K +     +++       FW    G H Q   
Sbjct: 874 -----KTKE---NNQVIVSTKDDNSFSDKNKEHSFFITDSDASGGDFWRERSGEHTQETN 925

Query: 172 RGYSEKCCLTGCTKEELSIACLPYIDFKRLKEK 204
             +S K  +    KEEL       ID +R  E+
Sbjct: 926 SPHSLKKDVENMGKEELQKVLFEQIDLRRRLEQ 958


>gi|226817313 SH3 and multiple ankyrin repeat domains 2 isoform 1
           [Homo sapiens]
          Length = 1849

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 34/129 (26%), Positives = 52/129 (40%), Gaps = 18/129 (13%)

Query: 37  LVKEIEKLCGHANWSQFRFEE--ETPFSRLIAQASEKVE---------AYSPYQFESPQT 85
           LV++I K+        F   E  ETP + L AQ  + VE         A+  ++ +   T
Sbjct: 175 LVEKITKMLDRGLDPNFHDPETGETPLT-LAAQLDDSVEVIKALKNGGAHLDFRAKDGMT 233

Query: 86  ASPARGRGTNPVSTSWEEAVNSWEMQSLPEYKDKKGYSPLGKTREFSSS-HNINVYIHEN 144
           A     R  N V+          E+ + P+YKD  G +PL  T       +   + +HE+
Sbjct: 234 ALHKAARARNQVALK-----TLLELGASPDYKDSYGLTPLYHTAIVGGDPYCCELLLHEH 288

Query: 145 AKFQKKRRN 153
           A    K  N
Sbjct: 289 ATVCCKDEN 297


>gi|18254464 relaxin 3 preproprotein [Homo sapiens]
          Length = 142

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)

Query: 173 GYSEKCCLTGCTKEELSIAC 192
           G S  CC  GC+K E+S  C
Sbjct: 123 GLSSSCCKWGCSKSEISSLC 142


>gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]
          Length = 4377

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 117 KDKKGYSPLGKTREFSSSHNINVYIHENA 145
           K K GY+PL +  +   +H INV +  NA
Sbjct: 759 KTKNGYTPLHQAAQQGHTHIINVLLQNNA 787


>gi|46048234 nucleolar protein 8 [Homo sapiens]
          Length = 1167

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 16/92 (17%)

Query: 46  GHANWSQFRFEEETPFSRLIAQASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAV 105
           GH NW   +F    P   L  Q   K+  Y P ++             T P+S+      
Sbjct: 137 GHKNWVVSKFGRVLPVLHLKNQHKRKIIKYDPSKYCHNLKKIGEDFSNTIPISSL----- 191

Query: 106 NSWEMQSLPEYKDKKGYSPLGKTR--EFSSSH 135
            +WE++         G  P+ K R  EFS  H
Sbjct: 192 -TWELEG--------GNDPMSKKRRGEFSDFH 214


>gi|5032143 TBP-associated factor 1A isoform 1 [Homo sapiens]
          Length = 450

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)

Query: 101 WEEAVNSWEMQSLPEYKDKKGYSPL----GKTREFSSSHNINVYIHENAKFQKKRRNKIK 156
           W+  V S+ ++ L  Y D+ G   +        +F S+ N ++Y++   K QK  R+K+ 
Sbjct: 236 WDPFVKSY-VEMLEFYGDRDGAQEVLTNYAYDEKFPSNPNAHIYLYNFLKRQKAPRSKLI 294

Query: 157 TLSNLFWGHHPQRK 170
           ++  + +   P  K
Sbjct: 295 SVLKILYQIVPSHK 308


>gi|21536362 TBP-associated factor 1A isoform 2 [Homo sapiens]
          Length = 336

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)

Query: 101 WEEAVNSWEMQSLPEYKDKKGYSPL----GKTREFSSSHNINVYIHENAKFQKKRRNKIK 156
           W+  V S+ ++ L  Y D+ G   +        +F S+ N ++Y++   K QK  R+K+ 
Sbjct: 122 WDPFVKSY-VEMLEFYGDRDGAQEVLTNYAYDEKFPSNPNAHIYLYNFLKRQKAPRSKLI 180

Query: 157 TLSNLFWGHHPQRK 170
           ++  + +   P  K
Sbjct: 181 SVLKILYQIVPSHK 194


>gi|188595682 ankyrin 2 isoform 3 [Homo sapiens]
          Length = 1863

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 117 KDKKGYSPLGKTREFSSSHNINVYIHENAK 146
           K K GY+PL +  +   +H INV +   AK
Sbjct: 736 KTKNGYTPLHQAAQQGHTHIINVLLQHGAK 765


>gi|52426737 ankyrin 2 isoform 2 [Homo sapiens]
          Length = 1872

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 117 KDKKGYSPLGKTREFSSSHNINVYIHENAK 146
           K K GY+PL +  +   +H INV +   AK
Sbjct: 757 KTKNGYTPLHQAAQQGHTHIINVLLQHGAK 786


>gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]
          Length = 3957

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 117 KDKKGYSPLGKTREFSSSHNINVYIHENAK 146
           K K GY+PL +  +   +H INV +   AK
Sbjct: 757 KTKNGYTPLHQAAQQGHTHIINVLLQHGAK 786


>gi|145580608 WD repeat domain 62 isoform 1 [Homo sapiens]
          Length = 1523

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 3/49 (6%)

Query: 95  NPVSTSWEEAVNS---WEMQSLPEYKDKKGYSPLGKTREFSSSHNINVY 140
           N V   W E  +S   W ++  PE++D++   P G     SS + I  +
Sbjct: 392 NRVGKVWSELFHSSYVWNVEVYPEFEDQRACLPSGSFLTCSSDNTIRFW 440


>gi|145580610 WD repeat domain 62 isoform 2 [Homo sapiens]
          Length = 1518

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 3/49 (6%)

Query: 95  NPVSTSWEEAVNS---WEMQSLPEYKDKKGYSPLGKTREFSSSHNINVY 140
           N V   W E  +S   W ++  PE++D++   P G     SS + I  +
Sbjct: 392 NRVGKVWSELFHSSYVWNVEVYPEFEDQRACLPSGSFLTCSSDNTIRFW 440


>gi|149944593 hypothetical protein LOC23349 [Homo sapiens]
          Length = 400

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 16/70 (22%), Positives = 26/70 (37%)

Query: 46  GHANWSQFRFEEETPFSRLIAQASEKVEAYSPYQFESPQTASPARGRGTNPVSTSWEEAV 105
           GH  W  F   E     + +   +  +   +  + E  + A  ARG G+         A 
Sbjct: 261 GHIEWPDFLSHESLLLLQQLRPQNSLLRLLTVKERERARAAFLARGSGSTVSEAECRRAQ 320

Query: 106 NSWEMQSLPE 115
           +SW  +  PE
Sbjct: 321 HSWFCKRFPE 330


>gi|18158228 zinc finger protein 280A [Homo sapiens]
          Length = 542

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%)

Query: 136 NINVYIHENAKFQKKRRNKIKTLSNLFWGHHP---QRKRRGYSEKCCLTGCTK 185
           +I+    +N  F  K+ N I  LSN ++G H    Q +++ ++   CL+ C K
Sbjct: 254 DISSLASQNKTFDPKKENPIVLLSNFYYGQHKGDGQPEQKTHTTFKCLS-CVK 305


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.132    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,410,053
Number of Sequences: 37866
Number of extensions: 366115
Number of successful extensions: 1132
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1096
Number of HSP's gapped (non-prelim): 53
length of query: 213
length of database: 18,247,518
effective HSP length: 98
effective length of query: 115
effective length of database: 14,536,650
effective search space: 1671714750
effective search space used: 1671714750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.