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Search of human proteins with 12408692
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|12408692 chorionic somatomammotropin hormone 2 isoform 2
[Homo sapiens]
(167 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|12408692 chorionic somatomammotropin hormone 2 isoform 2 [Hom... 335 1e-92
gi|12408685 chorionic somatomammotropin hormone 1 isoform 2 [Hom... 332 1e-91
gi|10334861 chorionic somatomammotropin hormone 2 isoform 1 [Hom... 305 9e-84
gi|4503083 chorionic somatomammotropin hormone 1 isoform 1 [Homo... 303 3e-83
gi|12545376 chorionic somatomammotropin hormone-like 1 isoform 1... 268 2e-72
gi|13027824 growth hormone 2 isoform 2 [Homo sapiens] 252 9e-68
gi|13027812 growth hormone 1 isoform 1 [Homo sapiens] 250 5e-67
gi|13027826 growth hormone 2 isoform 3 [Homo sapiens] 231 3e-61
gi|4503991 growth hormone 2 isoform 1 [Homo sapiens] 228 2e-60
gi|12545381 chorionic somatomammotropin hormone-like 1 isoform 2... 219 7e-58
gi|13027814 growth hormone 1 isoform 2 [Homo sapiens] 214 2e-56
gi|13027822 growth hormone 2 isoform 4 [Homo sapiens] 196 8e-51
gi|13027816 growth hormone 1 isoform 3 [Homo sapiens] 164 3e-41
gi|12545378 chorionic somatomammotropin hormone-like 1 isoform 4... 127 6e-30
gi|12408694 chorionic somatomammotropin hormone 2 isoform 3 [Hom... 116 1e-26
gi|12408687 chorionic somatomammotropin hormone 1 isoform 3 [Hom... 114 4e-26
gi|38201628 chorionic somatomammotropin hormone-like 1 isoform 3... 113 9e-26
gi|13027818 growth hormone 1 isoform 4 [Homo sapiens] 97 6e-21
gi|239756908 PREDICTED: similar to chorionic somatomammotropin h... 67 7e-12
gi|4506105 prolactin precursor [Homo sapiens] 54 5e-08
gi|34452709 bromodomain containing 8 isoform 3 [Homo sapiens] 31 0.43
gi|34452707 bromodomain containing 8 isoform 2 [Homo sapiens] 31 0.43
gi|34452705 bromodomain containing 8 isoform 1 [Homo sapiens] 31 0.43
gi|10863937 tumor necrosis factor, alpha-induced protein 1 [Homo... 30 0.96
gi|5032281 dystrophin Dp427c isoform [Homo sapiens] 28 2.8
gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens] 28 2.8
gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens] 28 2.8
gi|5032285 dystrophin Dp427l isoform [Homo sapiens] 28 2.8
gi|5032283 dystrophin Dp427m isoform [Homo sapiens] 28 2.8
gi|239753543 PREDICTED: similar to hCG2041108 [Homo sapiens] 27 8.1
>gi|12408692 chorionic somatomammotropin hormone 2 isoform 2 [Homo
sapiens]
Length = 167
Score = 335 bits (859), Expect = 1e-92
Identities = 167/167 (100%), Positives = 167/167 (100%)
Query: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR
Sbjct: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGVRVAPGVANPGTPLA 167
SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGVRVAPGVANPGTPLA
Sbjct: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGVRVAPGVANPGTPLA 167
>gi|12408685 chorionic somatomammotropin hormone 1 isoform 2 [Homo
sapiens]
Length = 256
Score = 332 bits (850), Expect = 1e-91
Identities = 165/167 (98%), Positives = 165/167 (98%)
Query: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MA GSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET
Sbjct: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR
Sbjct: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGVRVAPGVANPGTPLA 167
SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGVRVAPGV NPGTPLA
Sbjct: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGVRVAPGVTNPGTPLA 167
>gi|10334861 chorionic somatomammotropin hormone 2 isoform 1 [Homo
sapiens]
Length = 217
Score = 305 bits (782), Expect = 9e-84
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR
Sbjct: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG 152
SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG
Sbjct: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG 152
>gi|4503083 chorionic somatomammotropin hormone 1 isoform 1 [Homo
sapiens]
Length = 217
Score = 303 bits (777), Expect = 3e-83
Identities = 151/152 (99%), Positives = 151/152 (99%)
Query: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MA GSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET
Sbjct: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR
Sbjct: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG 152
SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG
Sbjct: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG 152
>gi|12545376 chorionic somatomammotropin hormone-like 1 isoform 1
precursor [Homo sapiens]
Length = 222
Score = 268 bits (684), Expect = 2e-72
Identities = 140/157 (89%), Positives = 141/157 (89%), Gaps = 5/157 (3%)
Query: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF--- 57
MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLF AMLQAHRAHQLAIDTYQEF
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFKEAMLQAHRAHQLAIDTYQEFISS 60
Query: 58 --EETYIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEP 115
E YI K+QKYSFLHDSQTSFCFSDSIPT SNMEETQQKSNLELL ISLLLIES LEP
Sbjct: 61 WGMEAYITKEQKYSFLHDSQTSFCFSDSIPTSSNMEETQQKSNLELLHISLLLIESRLEP 120
Query: 116 VRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG 152
VRFLRS F NNLVYDTSDSDDYHLLKDLEEGIQ LMG
Sbjct: 121 VRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQMLMG 157
>gi|13027824 growth hormone 2 isoform 2 [Homo sapiens]
Length = 256
Score = 252 bits (644), Expect = 9e-68
Identities = 128/167 (76%), Positives = 142/167 (85%)
Query: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MAAGSRTSLLLAF LLCL WLQE A T+PLSRLFD+AML+A R +QLA DTYQEFEE
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFEEA 60
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
YI K+QKYSFL + QTS CFS+SIPTPSN +TQQKSNLELLRISLLLI+SWLEPV+ LR
Sbjct: 61 YILKEQKYSFLQNPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 120
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGVRVAPGVANPGTPLA 167
S+FAN+LVY SDS+ Y LKDLEEGIQTLM VRVAPG+ NPG PLA
Sbjct: 121 SVFANSLVYGASDSNVYRHLKDLEEGIQTLMWVRVAPGIPNPGAPLA 167
>gi|13027812 growth hormone 1 isoform 1 [Homo sapiens]
Length = 217
Score = 250 bits (638), Expect = 5e-67
Identities = 124/152 (81%), Positives = 135/152 (88%)
Query: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLFD+AML+AHR HQLA DTYQEFEE
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEA 60
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
YIPK+QKYSFL + QTS CFS+SIPTPSN EETQQKSNLELLRISLLLI+SWLEPV+FLR
Sbjct: 61 YIPKEQKYSFLQNPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLR 120
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG 152
S+FAN+LVY SDS+ Y LLKDLEEGIQTLMG
Sbjct: 121 SVFANSLVYGASDSNVYDLLKDLEEGIQTLMG 152
>gi|13027826 growth hormone 2 isoform 3 [Homo sapiens]
Length = 245
Score = 231 bits (588), Expect = 3e-61
Identities = 119/160 (74%), Positives = 136/160 (85%), Gaps = 1/160 (0%)
Query: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MAAGSRTSLLLAF LLCL WLQE A T+PLSRLFD+AML+A R +QLA DTYQEFEE
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFEEA 60
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
YI K+QKYSFL + QTS CFS+SIPTPSN +TQQKSNLELLRISLLLI+SWLEPV+ LR
Sbjct: 61 YILKEQKYSFLQNPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 120
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGVRV-APGV 159
S+FAN+LVY SDS+ Y LKDLEEGIQTL+G ++ APG+
Sbjct: 121 SVFANSLVYGASDSNVYRHLKDLEEGIQTLIGWKMAAPGL 160
>gi|4503991 growth hormone 2 isoform 1 [Homo sapiens]
Length = 217
Score = 228 bits (580), Expect = 2e-60
Identities = 116/151 (76%), Positives = 129/151 (85%)
Query: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MAAGSRTSLLLAF LLCL WLQE A T+PLSRLFD+AML+A R +QLA DTYQEFEE
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFEEA 60
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
YI K+QKYSFL + QTS CFS+SIPTPSN +TQQKSNLELLRISLLLI+SWLEPV+ LR
Sbjct: 61 YILKEQKYSFLQNPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 120
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLM 151
S+FAN+LVY SDS+ Y LKDLEEGIQTLM
Sbjct: 121 SVFANSLVYGASDSNVYRHLKDLEEGIQTLM 151
>gi|12545381 chorionic somatomammotropin hormone-like 1 isoform 2
precursor [Homo sapiens]
Length = 199
Score = 219 bits (559), Expect = 7e-58
Identities = 120/152 (78%), Positives = 122/152 (80%), Gaps = 18/152 (11%)
Query: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLF AMLQAHRAHQLAIDTYQEF +
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFKEAMLQAHRAHQLAIDTYQEFISS 60
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
+ DSIPT SNMEETQQKSNLELL ISLLLIES LEPVRFLR
Sbjct: 61 W------------------GMDSIPTSSNMEETQQKSNLELLHISLLLIESRLEPVRFLR 102
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG 152
S F NNLVYDTSDSDDYHLLKDLEEGIQ LMG
Sbjct: 103 STFTNNLVYDTSDSDDYHLLKDLEEGIQMLMG 134
>gi|13027814 growth hormone 1 isoform 2 [Homo sapiens]
Length = 202
Score = 214 bits (546), Expect = 2e-56
Identities = 112/152 (73%), Positives = 122/152 (80%), Gaps = 15/152 (9%)
Query: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLFD+AML+AHR HQLA DTYQEF
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF--- 57
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
+ QTS CFS+SIPTPSN EETQQKSNLELLRISLLLI+SWLEPV+FLR
Sbjct: 58 ------------NPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLR 105
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG 152
S+FAN+LVY SDS+ Y LLKDLEEGIQTLMG
Sbjct: 106 SVFANSLVYGASDSNVYDLLKDLEEGIQTLMG 137
>gi|13027822 growth hormone 2 isoform 4 [Homo sapiens]
Length = 202
Score = 196 bits (498), Expect = 8e-51
Identities = 105/151 (69%), Positives = 117/151 (77%), Gaps = 15/151 (9%)
Query: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MAAGSRTSLLLAF LLCL WLQE A T+PLSRLFD+AML+A R +QLA DTYQEF
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF--- 57
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
+ QTS CFS+SIPTPSN +TQQKSNLELLRISLLLI+SWLEPV+ LR
Sbjct: 58 ------------NPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 105
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLM 151
S+FAN+LVY SDS+ Y LKDLEEGIQTLM
Sbjct: 106 SVFANSLVYGASDSNVYRHLKDLEEGIQTLM 136
>gi|13027816 growth hormone 1 isoform 3 [Homo sapiens]
Length = 177
Score = 164 bits (416), Expect = 3e-41
Identities = 92/152 (60%), Positives = 100/152 (65%), Gaps = 40/152 (26%)
Query: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLFD+AML+AHR HQLA DTYQEF
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF--- 57
Query: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
NLELLRISLLLI+SWLEPV+FLR
Sbjct: 58 -------------------------------------NLELLRISLLLIQSWLEPVQFLR 80
Query: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG 152
S+FAN+LVY SDS+ Y LLKDLEEGIQTLMG
Sbjct: 81 SVFANSLVYGASDSNVYDLLKDLEEGIQTLMG 112
>gi|12545378 chorionic somatomammotropin hormone-like 1 isoform 4
[Homo sapiens]
Length = 139
Score = 127 bits (318), Expect = 6e-30
Identities = 65/72 (90%), Positives = 66/72 (91%)
Query: 81 SDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLL 140
+DSIPT SNMEETQQKSNLELL ISLLLIES LEPVRFLRS F NNLVYDTSDSDDYHLL
Sbjct: 3 ADSIPTSSNMEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLL 62
Query: 141 KDLEEGIQTLMG 152
KDLEEGIQ LMG
Sbjct: 63 KDLEEGIQMLMG 74
>gi|12408694 chorionic somatomammotropin hormone 2 isoform 3 [Homo
sapiens]
Length = 122
Score = 116 bits (290), Expect = 1e-26
Identities = 57/57 (100%), Positives = 57/57 (100%)
Query: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
>gi|12408687 chorionic somatomammotropin hormone 1 isoform 3 [Homo
sapiens]
Length = 122
Score = 114 bits (285), Expect = 4e-26
Identities = 56/57 (98%), Positives = 56/57 (98%)
Query: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
MA GSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF
Sbjct: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
>gi|38201628 chorionic somatomammotropin hormone-like 1 isoform 3
[Homo sapiens]
Length = 128
Score = 113 bits (282), Expect = 9e-26
Identities = 58/63 (92%), Positives = 58/63 (92%)
Query: 90 MEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQT 149
MEETQQKSNLELL ISLLLIES LEPVRFLRS F NNLVYDTSDSDDYHLLKDLEEGIQ
Sbjct: 1 MEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQM 60
Query: 150 LMG 152
LMG
Sbjct: 61 LMG 63
>gi|13027818 growth hormone 1 isoform 4 [Homo sapiens]
Length = 122
Score = 97.1 bits (240), Expect = 6e-21
Identities = 46/57 (80%), Positives = 49/57 (85%)
Query: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLFD+AML+AHR HQLA DTYQEF
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF 57
>gi|239756908 PREDICTED: similar to chorionic somatomammotropin
hormone 2 [Homo sapiens]
Length = 96
Score = 67.0 bits (162), Expect = 7e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Query: 122 MFANNLVYDTSDSDDYHLLKDLEEGIQTLMG 152
MFANNLVYDTSDSDDYHLLKDLEEGIQTLMG
Sbjct: 1 MFANNLVYDTSDSDDYHLLKDLEEGIQTLMG 31
>gi|4506105 prolactin precursor [Homo sapiens]
Length = 227
Score = 54.3 bits (129), Expect = 5e-08
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 4 GSRTSLLLAFALLC-----LPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFE 58
GS LL++ LLC LP A V L LFD A++ +H H L+ + + EF+
Sbjct: 10 GSLLLLLVSNLLLCQSVAPLPICPGGAARCQVTLRDLFDRAVVLSHYIHNLSSEMFSEFD 69
Query: 59 ETYIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRF 118
+ Y F+ + S C + S+ TP + E+ QQ + + L + + ++ SW EP+
Sbjct: 70 KRY---THGRGFITKAINS-CHTSSLATPEDKEQAQQMNQKDFLSLIVSILRSWNEPLYH 125
Query: 119 L 119
L
Sbjct: 126 L 126
>gi|34452709 bromodomain containing 8 isoform 3 [Homo sapiens]
Length = 757
Score = 31.2 bits (69), Expect = 0.43
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 108 LIESWLEPVRFLRSMFANNLVYDTSDSDDYHLL----KDLEEGIQTLMGVRVAPGVANPG 163
LI S E R + MF N ++Y++SD D YH+ +D+ E IQ + ++ + G
Sbjct: 659 LIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLEQIQQFLATQLIMQTSESG 718
>gi|34452707 bromodomain containing 8 isoform 2 [Homo sapiens]
Length = 1235
Score = 31.2 bits (69), Expect = 0.43
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 108 LIESWLEPVRFLRSMFANNLVYDTSDSDDYHLL----KDLEEGIQTLMGVRVAPGVANPG 163
LI S E R + MF N ++Y++SD D YH+ +D+ E IQ + ++ + G
Sbjct: 765 LIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLEQIQQFLATQLIMQTSESG 824
Score = 26.9 bits (58), Expect = 8.1
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 80 FSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHL 139
+ D + P M+ T K NL RI + + +R L MF N ++Y+ SD YH+
Sbjct: 1140 YKDVVKRP--MDLTSLKRNLSKGRIRTMA-----QFLRDLMLMFQNAVMYNDSDHHVYHM 1192
Query: 140 LKDLEEGI 147
++ +
Sbjct: 1193 AVEMRREV 1200
>gi|34452705 bromodomain containing 8 isoform 1 [Homo sapiens]
Length = 951
Score = 31.2 bits (69), Expect = 0.43
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 108 LIESWLEPVRFLRSMFANNLVYDTSDSDDYHLL----KDLEEGIQTLMGVRVAPGVANPG 163
LI S E R + MF N ++Y++SD D YH+ +D+ E IQ + ++ + G
Sbjct: 838 LIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLEQIQQFLATQLIMQTSESG 897
>gi|10863937 tumor necrosis factor, alpha-induced protein 1 [Homo
sapiens]
Length = 316
Score = 30.0 bits (66), Expect = 0.96
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 69 SFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLV 128
S L D + S+ +IP ++++E ++ LIES +PV L +NN
Sbjct: 122 SALQDKKDSYQPVCNIPIITSLKEEER------------LIESSTKPVVKLLYNRSNNKY 169
Query: 129 YDTSDSDDYHLLKDLE 144
TS+SDD HLLK++E
Sbjct: 170 SYTSNSDD-HLLKNIE 184
>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
Length = 3677
Score = 28.5 bits (62), Expect = 2.8
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 15/108 (13%)
Query: 21 LQEAGAVQTVPLSRLFDHAML--QAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSF 78
+QE + P +H L Q H + Q+ + Q +E T PK + S+ +
Sbjct: 240 IQEVEMLPRPPKVTKEEHFQLHHQMHYSQQITVSLAQGYERTSSPKPRFKSYAYTQAAYV 299
Query: 79 CFSDSIPTP---SNMEETQQKS----------NLELLRISLLLIESWL 113
SD +P ++E + KS NL+ + +L + SWL
Sbjct: 300 TTSDPTRSPFPSQHLEAPEDKSFGSSLMESEVNLDRYQTALEEVLSWL 347
>gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens]
Length = 3562
Score = 28.5 bits (62), Expect = 2.8
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 15/108 (13%)
Query: 21 LQEAGAVQTVPLSRLFDHAML--QAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSF 78
+QE + P +H L Q H + Q+ + Q +E T PK + S+ +
Sbjct: 125 IQEVEMLPRPPKVTKEEHFQLHHQMHYSQQITVSLAQGYERTSSPKPRFKSYAYTQAAYV 184
Query: 79 CFSDSIPTP---SNMEETQQKS----------NLELLRISLLLIESWL 113
SD +P ++E + KS NL+ + +L + SWL
Sbjct: 185 TTSDPTRSPFPSQHLEAPEDKSFGSSLMESEVNLDRYQTALEEVLSWL 232
>gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]
Length = 3681
Score = 28.5 bits (62), Expect = 2.8
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 15/108 (13%)
Query: 21 LQEAGAVQTVPLSRLFDHAML--QAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSF 78
+QE + P +H L Q H + Q+ + Q +E T PK + S+ +
Sbjct: 244 IQEVEMLPRPPKVTKEEHFQLHHQMHYSQQITVSLAQGYERTSSPKPRFKSYAYTQAAYV 303
Query: 79 CFSDSIPTP---SNMEETQQKS----------NLELLRISLLLIESWL 113
SD +P ++E + KS NL+ + +L + SWL
Sbjct: 304 TTSDPTRSPFPSQHLEAPEDKSFGSSLMESEVNLDRYQTALEEVLSWL 351
>gi|5032285 dystrophin Dp427l isoform [Homo sapiens]
Length = 3562
Score = 28.5 bits (62), Expect = 2.8
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 15/108 (13%)
Query: 21 LQEAGAVQTVPLSRLFDHAML--QAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSF 78
+QE + P +H L Q H + Q+ + Q +E T PK + S+ +
Sbjct: 125 IQEVEMLPRPPKVTKEEHFQLHHQMHYSQQITVSLAQGYERTSSPKPRFKSYAYTQAAYV 184
Query: 79 CFSDSIPTP---SNMEETQQKS----------NLELLRISLLLIESWL 113
SD +P ++E + KS NL+ + +L + SWL
Sbjct: 185 TTSDPTRSPFPSQHLEAPEDKSFGSSLMESEVNLDRYQTALEEVLSWL 232
>gi|5032283 dystrophin Dp427m isoform [Homo sapiens]
Length = 3685
Score = 28.5 bits (62), Expect = 2.8
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 15/108 (13%)
Query: 21 LQEAGAVQTVPLSRLFDHAML--QAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSF 78
+QE + P +H L Q H + Q+ + Q +E T PK + S+ +
Sbjct: 248 IQEVEMLPRPPKVTKEEHFQLHHQMHYSQQITVSLAQGYERTSSPKPRFKSYAYTQAAYV 307
Query: 79 CFSDSIPTP---SNMEETQQKS----------NLELLRISLLLIESWL 113
SD +P ++E + KS NL+ + +L + SWL
Sbjct: 308 TTSDPTRSPFPSQHLEAPEDKSFGSSLMESEVNLDRYQTALEEVLSWL 355
>gi|239753543 PREDICTED: similar to hCG2041108 [Homo sapiens]
Length = 299
Score = 26.9 bits (58), Expect = 8.1
Identities = 16/27 (59%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Query: 1 MAAGSRTSL-LLAFALLCLPWLQEAGA 26
MA+ S +SL LLA+ LL PWL+EA A
Sbjct: 1 MASQSGSSLGLLAWFLLLQPWLEEARA 27
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.133 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,171,217
Number of Sequences: 37866
Number of extensions: 235544
Number of successful extensions: 627
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 596
Number of HSP's gapped (non-prelim): 35
length of query: 167
length of database: 18,247,518
effective HSP length: 95
effective length of query: 72
effective length of database: 14,650,248
effective search space: 1054817856
effective search space used: 1054817856
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.