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Search of human proteins with 37675373
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|37675373 dendritic cell-associated C-type lectin 1 isoform a
[Homo sapiens]
(247 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|37675373 dendritic cell-associated C-type lectin 1 isoform a ... 513 e-146
gi|13384604 dendritic cell-associated C-type lectin 1 isoform b ... 399 e-111
gi|37675375 dendritic cell-associated C-type lectin 1 isoform c ... 338 3e-93
gi|37675379 dendritic cell-associated C-type lectin 1 isoform e ... 290 8e-79
gi|37675377 dendritic cell-associated C-type lectin 1 isoform d ... 224 5e-59
gi|37675387 dendritic cell-associated C-type lectin 1 isoform f ... 138 4e-33
gi|4505501 oxidized low density lipoprotein (lectin-like) recept... 130 1e-30
gi|153252029 C-type lectin domain family 1, member B isoform a [... 115 4e-26
gi|37577103 C-type lectin-like receptor-1 [Homo sapiens] 105 3e-23
gi|194018501 C-type lectin domain family 12, member B isoform 1 ... 97 1e-20
gi|153252048 C-type lectin domain family 1, member B isoform b [... 89 3e-18
gi|46409326 C-type lectin domain family 9, member A [Homo sapiens] 88 6e-18
gi|194018499 C-type lectin domain family 12, member B isoform 2 ... 80 1e-15
gi|167614498 killer cell lectin-like receptor subfamily D, membe... 76 3e-14
gi|4504889 killer cell lectin-like receptor subfamily D, member ... 76 3e-14
gi|7705574 killer cell lectin-like receptor subfamily F, member ... 75 7e-14
gi|94557290 myeloid inhibitory C-type lectin-like receptor isofo... 73 2e-13
gi|4504879 killer cell lectin-like receptor subfamily B, member ... 72 4e-13
gi|75709169 killer cell lectin-like receptor subfamily C, member... 71 1e-12
gi|223029517 CD209 molecule isoform 8 [Homo sapiens] 70 2e-12
gi|10281669 C-type lectin, superfamily member 5 [Homo sapiens] 70 2e-12
gi|47717094 killer cell lectin-like receptor subfamily C, member... 69 4e-12
gi|4504881 killer cell lectin-like receptor subfamily C, member ... 69 4e-12
gi|223278342 C-type lectin domain family 4, member M isoform 11 ... 69 4e-12
gi|223278347 C-type lectin domain family 4, member M isoform 9 [... 69 5e-12
gi|223278339 C-type lectin domain family 4, member M isoform 7 [... 69 5e-12
gi|223278337 C-type lectin domain family 4, member M isoform 12 ... 69 5e-12
gi|223278335 C-type lectin domain family 4, member M isoform 2 [... 69 5e-12
gi|223278350 C-type lectin domain family 4, member M isoform 8 [... 69 5e-12
gi|42542390 C-type lectin domain family 4, member M isoform 1 [H... 69 5e-12
>gi|37675373 dendritic cell-associated C-type lectin 1 isoform a
[Homo sapiens]
Length = 247
Score = 513 bits (1320), Expect = e-146
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI
Sbjct: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
Query: 61 AVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPTQSSLEDSVTPTKAVKTTGVLSSPC 120
AVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPTQSSLEDSVTPTKAVKTTGVLSSPC
Sbjct: 61 AVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPTQSSLEDSVTPTKAVKTTGVLSSPC 120
Query: 121 PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFW 180
PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFW
Sbjct: 121 PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFW 180
Query: 181 IGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSI 240
IGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSI
Sbjct: 181 IGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSI 240
Query: 241 CEKKFSM 247
CEKKFSM
Sbjct: 241 CEKKFSM 247
>gi|13384604 dendritic cell-associated C-type lectin 1 isoform b
[Homo sapiens]
Length = 201
Score = 399 bits (1025), Expect = e-111
Identities = 201/247 (81%), Positives = 201/247 (81%), Gaps = 46/247 (18%)
Query: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI
Sbjct: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
Query: 61 AVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPTQSSLEDSVTPTKAVKTTGVLSSPC 120
AVVLGTM GVLSSPC
Sbjct: 61 AVVLGTM----------------------------------------------GVLSSPC 74
Query: 121 PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFW 180
PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFW
Sbjct: 75 PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFW 134
Query: 181 IGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSI 240
IGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSI
Sbjct: 135 IGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSI 194
Query: 241 CEKKFSM 247
CEKKFSM
Sbjct: 195 CEKKFSM 201
>gi|37675375 dendritic cell-associated C-type lectin 1 isoform c
[Homo sapiens]
Length = 189
Score = 338 bits (866), Expect = 3e-93
Identities = 164/164 (100%), Positives = 164/164 (100%)
Query: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI
Sbjct: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
Query: 61 AVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPTQSSLEDSVTPTKAVKTTGVLSSPC 120
AVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPTQSSLEDSVTPTKAVKTTGVLSSPC
Sbjct: 61 AVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPTQSSLEDSVTPTKAVKTTGVLSSPC 120
Query: 121 PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 164
PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL
Sbjct: 121 PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 164
>gi|37675379 dendritic cell-associated C-type lectin 1 isoform e
[Homo sapiens]
Length = 168
Score = 290 bits (742), Expect = 8e-79
Identities = 137/145 (94%), Positives = 137/145 (94%)
Query: 103 SVTPTKAVKTTGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSN 162
S T V GVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSN
Sbjct: 24 SNTRIAVVSEKGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSN 83
Query: 163 ELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVW 222
ELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVW
Sbjct: 84 ELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVW 143
Query: 223 IHVSVIYDQLCSVPSYSICEKKFSM 247
IHVSVIYDQLCSVPSYSICEKKFSM
Sbjct: 144 IHVSVIYDQLCSVPSYSICEKKFSM 168
Score = 77.8 bits (190), Expect = 8e-15
Identities = 38/45 (84%), Positives = 38/45 (84%), Gaps = 2/45 (4%)
Query: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKG--SCAASPPW 43
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKG S P W
Sbjct: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGVLSSPCPPNW 45
>gi|37675377 dendritic cell-associated C-type lectin 1 isoform d
[Homo sapiens]
Length = 143
Score = 224 bits (571), Expect = 5e-59
Identities = 118/164 (71%), Positives = 118/164 (71%), Gaps = 46/164 (28%)
Query: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI
Sbjct: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
Query: 61 AVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPTQSSLEDSVTPTKAVKTTGVLSSPC 120
AVVLGTM GVLSSPC
Sbjct: 61 AVVLGTM----------------------------------------------GVLSSPC 74
Query: 121 PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 164
PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL
Sbjct: 75 PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNEL 118
>gi|37675387 dendritic cell-associated C-type lectin 1 isoform f
[Homo sapiens]
Length = 77
Score = 138 bits (348), Expect = 4e-33
Identities = 68/68 (100%), Positives = 68/68 (100%)
Query: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI
Sbjct: 1 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI 60
Query: 61 AVVLGTMA 68
AVVLGTMA
Sbjct: 61 AVVLGTMA 68
>gi|4505501 oxidized low density lipoprotein (lectin-like) receptor
1 [Homo sapiens]
Length = 273
Score = 130 bits (326), Expect = 1e-30
Identities = 76/240 (31%), Positives = 118/240 (49%), Gaps = 33/240 (13%)
Query: 40 SPPWRLIAVILGILCLVILVIAVVLGTMAIWRSN----------SGSNTLENGYFLSRNK 89
SP W L A LG+LCL ++V +VLG S+ LE +
Sbjct: 32 SPWWCLAAATLGVLCLGLVVTIMVLGMQLSQVSDLLTQEQANLTHQKKKLEGQISARQQA 91
Query: 90 ENHSQPTQSSLEDSVTPT----------------------KAVKTTGVLSSPCPPNWIIY 127
E SQ +++ L++ + + +K S+PCP +WI +
Sbjct: 92 EEASQESENELKEMIETLARKLNEKSKEQMELHHQNLNLQETLKRVANCSAPCPQDWIWH 151
Query: 128 EKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRPQ 187
++CYLFS +W+ S+ +C L + LLKI+S+ +L FI +Q S FW+GLSR
Sbjct: 152 GENCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFI-QQAISYSSFPFWMGLSRRN 210
Query: 188 TEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICEKKFSM 247
PWLWEDGS +LF++R +Q PS C +I +Y + C + ++SIC+KK ++
Sbjct: 211 PSYPWLWEDGSPLMPHLFRVRGAVSQTYPSGTCAYIQRGAVYAENCILAAFSICQKKANL 270
>gi|153252029 C-type lectin domain family 1, member B isoform a
[Homo sapiens]
Length = 229
Score = 115 bits (288), Expect = 4e-26
Identities = 77/242 (31%), Positives = 116/242 (47%), Gaps = 27/242 (11%)
Query: 11 DEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVIAVVLGTMAIW 70
DEDGY L+ ++ I+V S A+S WR++A+IL ILC+ ++V V LG ++
Sbjct: 3 DEDGYITLNIKTRKPALISVGS-----ASSSWWRVMALILLILCVGMVVGLVALGIWSVM 57
Query: 71 RSNSGSNTLENGYFLSRNKENHSQPTQSSLE---DSVTPTKAVKTT--GVLSSPCPPNWI 125
+ N +L EN + Q + V +K T G SPC NW
Sbjct: 58 QRN----------YLQGENENRTGTLQQLAKRFCQYVVKQSELKGTFKGHKCSPCDTNWR 107
Query: 126 IYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSR 185
Y SCY F +W+ SK+ C + + LLKID+ N IV+ + ++ W+GLSR
Sbjct: 108 YYGDSCYGFFRHNLTWEESKQYCTDMNATLLKIDNRN----IVEYIKARTHLIRWVGLSR 163
Query: 186 PQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICEKKF 245
++ W WEDGS S N+F+ + NC + H ++ C Y +CE+K
Sbjct: 164 QKSNEVWKWEDGSVISENMFEF---LEDGKGNMNCAYFHNGKMHPTFCENKHYLMCERKA 220
Query: 246 SM 247
M
Sbjct: 221 GM 222
>gi|37577103 C-type lectin-like receptor-1 [Homo sapiens]
Length = 280
Score = 105 bits (263), Expect = 3e-23
Identities = 78/264 (29%), Positives = 113/264 (42%), Gaps = 22/264 (8%)
Query: 2 EYHPDLENLDEDGYT--QLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILV 59
+Y + LD+DG T LH + TR A S WR +A+ L LCLV+L+
Sbjct: 4 KYSSTRDMLDDDGDTTMSLHSQGSATTRHPEPRRTEHRAPSSTWRPVALTLLTLCLVLLI 63
Query: 60 IAVVLGTMAIWR---SNSGSNTLENGYFLSRNKENHSQPTQSSLEDSVTPTKAV------ 110
LG + SN+G +T+ + N SQ QS ++ ++
Sbjct: 64 GLAALGLLFFQYYQLSNTGQDTISQ---MEERLGNTSQELQSLQVQNIKLAGSLQHVAEK 120
Query: 111 -------KTTGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNE 163
K SPC W + +CY F SW+ K C S +LKI+ +
Sbjct: 121 LCRELYNKAGAHRCSPCTEQWKWHGDNCYQFYKDSKSWEDCKYFCLSENSTMLKINKQED 180
Query: 164 LGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWI 223
L F Q S+ S+W GL RP + WLW DG+ F+S LF I T S +CV I
Sbjct: 181 LEFAASQSYSEFFYSYWTGLLRPDSGKAWLWMDGTPFTSELFHIIIDVTSPR-SRDCVAI 239
Query: 224 HVSVIYDQLCSVPSYSICEKKFSM 247
+I+ + C +CE++ M
Sbjct: 240 LNGMIFSKDCKELKRCVCERRAGM 263
>gi|194018501 C-type lectin domain family 12, member B isoform 1
[Homo sapiens]
Length = 276
Score = 97.1 bits (240), Expect = 1e-20
Identities = 73/239 (30%), Positives = 109/239 (45%), Gaps = 30/239 (12%)
Query: 33 EKGSCAASPPWRLIAVILGILCLVILVIAVVLGTMAIWRSNSGSNTLENGYFLSRN---- 88
++G A SP WR A+ L LCL++L+ V LG M + SN ++ E L +
Sbjct: 29 KRGHPAPSPIWRHAALGLVTLCLMLLIGLVTLGMMFLQISNDINSDSEKLSQLQKTIQQQ 88
Query: 89 KENHSQPTQSS----LEDSVTPTKA-------------------VKTTGVLSSPCPPNWI 125
++N SQ +S +E+ ++ + T+ +PCP W
Sbjct: 89 QDNLSQQLGNSNNLSMEEEFLKSQISSVLKRQEQMAIKLCQELIIHTSDHRCNPCPKMWQ 148
Query: 126 IYEKSCYLFSMSLN-SWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLS 184
Y+ SCY F+ + +W S++ C S L+KIDS E F++ Q + FW+GLS
Sbjct: 149 WYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDFLMSQPLLM-FSFFWLGLS 207
Query: 185 RPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICEK 243
+ W WEDGS S +LF + Q N S C + IY CS + ICEK
Sbjct: 208 WDSSGRSWFWEDGSVPSPSLFSTK-ELDQINGSKGCAYFQKGNIYISRCSAEIFWICEK 265
>gi|153252048 C-type lectin domain family 1, member B isoform b
[Homo sapiens]
Length = 196
Score = 89.4 bits (220), Expect = 3e-18
Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
Query: 118 SPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDN 177
SPC NW Y SCY F +W+ SK+ C + + LLKID+ N IV+ + ++
Sbjct: 67 SPCDTNWRYYGDSCYGFFRHNLTWEESKQYCTDMNATLLKIDNRN----IVEYIKARTHL 122
Query: 178 SFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPS 237
W+GLSR ++ W WEDGS S N+F+ + NC + H ++ C
Sbjct: 123 IRWVGLSRQKSNEVWKWEDGSVISENMFEF---LEDGKGNMNCAYFHNGKMHPTFCENKH 179
Query: 238 YSICEKKFSM 247
Y +CE+K M
Sbjct: 180 YLMCERKAGM 189
>gi|46409326 C-type lectin domain family 9, member A [Homo sapiens]
Length = 241
Score = 88.2 bits (217), Expect = 6e-18
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 9/237 (3%)
Query: 11 DEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVIAVVLGTMAIW 70
+E+ YT L +DS + C+ + L+ VI + C+ +L ++ LG +
Sbjct: 3 EEEIYTSLQWDSPAPDTYQKCLSSNKCSGA--CCLVMVISCVFCMGLLTASIFLGVKLLQ 60
Query: 71 RSNSGSNTLENGYFLSRNKENHSQPTQS---SLEDSVTPTKAVKTTGVLSSPCPPNWIIY 127
S E R N ++ +S ++ + ++ SSPCP NWI
Sbjct: 61 VSTIAMQQQEKLIQQERALLNFTEWKRSCALQMKYCQAFMQNSLSSAHNSSPCPNNWIQN 120
Query: 128 EKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSS-QPDNSFWIGLSRP 186
+SCY S + W S+ C + GS LL+I+S E+ FI + + +W+GLS+
Sbjct: 121 RESCYYVSEIWSIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSYDYWVGLSQD 180
Query: 187 QTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICEK 243
WLW+DGS+ S L + ++ + C ++ + + CS Y ICEK
Sbjct: 181 GHSGRWLWQDGSSPSPGLLPAERS---QSANQVCGYVKSNSLLSSNCSTWKYFICEK 234
>gi|194018499 C-type lectin domain family 12, member B isoform 2
[Homo sapiens]
Length = 232
Score = 80.5 bits (197), Expect = 1e-15
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 29/201 (14%)
Query: 33 EKGSCAASPPWRLIAVILGILCLVILVIAVVLGTMAIWRSNSGSNTLENGYFLSRN---- 88
++G A SP WR A+ L LCL++L+ V LG M + SN ++ E L +
Sbjct: 29 KRGHPAPSPIWRHAALGLVTLCLMLLIGLVTLGMMFLQISNDINSDSEKLSQLQKTIQQQ 88
Query: 89 KENHSQPTQSS----LEDSVTPTKA-------------------VKTTGVLSSPCPPNWI 125
++N SQ +S +E+ ++ + T+ +PCP W
Sbjct: 89 QDNLSQQLGNSNNLSMEEEFLKSQISSVLKRQEQMAIKLCQELIIHTSDHRCNPCPKMWQ 148
Query: 126 IYEKSCYLFSMSLN-SWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLS 184
Y+ SCY F+ + +W S++ C S L+KIDS E F++ Q + FW+GLS
Sbjct: 149 WYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDFLMSQPLLM-FSFFWLGLS 207
Query: 185 RPQTEVPWLWEDGSTFSSNLF 205
+ W WEDGS S +L+
Sbjct: 208 WDSSGRSWFWEDGSVPSPSLY 228
>gi|167614498 killer cell lectin-like receptor subfamily D, member 1
isoform 1 [Homo sapiens]
Length = 179
Score = 75.9 bits (185), Expect = 3e-14
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 49/210 (23%)
Query: 43 WRLIAVILGILCLVILVIAVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPTQSSLED 102
WRLI+ LGI+CL ++ +L L+N + T+ S+E
Sbjct: 9 WRLISGTLGIICLSLMATLGIL--------------LKNSF------------TKLSIEP 42
Query: 103 SVTPTKAV---KTTGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKID 159
+ TP + K + S C W+ Y +CY S +W+ S+ C S+LL++
Sbjct: 43 AFTPGPNIELQKDSDCCS--CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQ 100
Query: 160 SSNELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQE----- 214
+++EL F+ S +WIGLS + WLWE+GS S LF T +
Sbjct: 101 NTDELDFM-----SSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAY 155
Query: 215 NPSPNCVWIHVSVIYDQLCSVPSYSICEKK 244
NP+ N + D+ C + IC+++
Sbjct: 156 NPNGNAL--------DESCEDKNRYICKQQ 177
>gi|4504889 killer cell lectin-like receptor subfamily D, member 1
isoform 1 [Homo sapiens]
Length = 179
Score = 75.9 bits (185), Expect = 3e-14
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 49/210 (23%)
Query: 43 WRLIAVILGILCLVILVIAVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPTQSSLED 102
WRLI+ LGI+CL ++ +L L+N + T+ S+E
Sbjct: 9 WRLISGTLGIICLSLMATLGIL--------------LKNSF------------TKLSIEP 42
Query: 103 SVTPTKAV---KTTGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKID 159
+ TP + K + S C W+ Y +CY S +W+ S+ C S+LL++
Sbjct: 43 AFTPGPNIELQKDSDCCS--CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQ 100
Query: 160 SSNELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQE----- 214
+++EL F+ S +WIGLS + WLWE+GS S LF T +
Sbjct: 101 NTDELDFM-----SSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAY 155
Query: 215 NPSPNCVWIHVSVIYDQLCSVPSYSICEKK 244
NP+ N + D+ C + IC+++
Sbjct: 156 NPNGNAL--------DESCEDKNRYICKQQ 177
>gi|7705574 killer cell lectin-like receptor subfamily F, member 1
[Homo sapiens]
Length = 231
Score = 74.7 bits (182), Expect = 7e-14
Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 18/239 (7%)
Query: 11 DEDGYTQLHFDSQ--SNTRIAVVSEKGSCAASPPWRLI----AVILGILCLVILVIAVVL 64
DE+ Y L+ S+ S+ + + ++ K ++++ + GIL L ++ + +++
Sbjct: 3 DEERYMTLNVQSKKRSSAQTSQLTFKDYSVTLHWYKILLGISGTVNGILTLTLISLILLV 62
Query: 65 GTMAIWRSNSGSNTLENGYFLSRN-KENHSQPTQSSLEDSVTPTKAVKTTGVLSSPCPPN 123
+ + GS + Y + + K N+ S +D A +T C
Sbjct: 63 SQGVLLKCQKGSCSNATQYEDTGDLKVNNGTRRNISNKDLCASRSADQTV-----LCQSE 117
Query: 124 WIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGL 183
W+ Y+ CY FS + SW S C + S+LL I E+ FI K + N WIGL
Sbjct: 118 WLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNLRQL--NYVWIGL 175
Query: 184 SRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICE 242
+ ++ W W DGS S +F I+ A + +C I S I+ + CS IC+
Sbjct: 176 NFTSLKMTWTWVDGSPIDSKIFFIKGPAKEN----SCAAIKESKIFSETCSSVFKWICQ 230
>gi|94557290 myeloid inhibitory C-type lectin-like receptor isoform
alpha [Homo sapiens]
Length = 265
Score = 73.2 bits (178), Expect = 2e-13
Identities = 67/254 (26%), Positives = 103/254 (40%), Gaps = 27/254 (10%)
Query: 11 DEDGYTQLHFDSQSNTR----IAVVSEKGSCAASPPWRLIAVILGILCLVILVIAVVLGT 66
+E Y L F + S I EK A S WR A+ L +LCL++L+ VL +
Sbjct: 3 EEVTYADLQFQNSSEMEKIPEIGKFGEKAPPAPSHVWRPAALFLTLLCLLLLIGLGVLAS 62
Query: 67 M----------AIWRSNSGSNTLENGYFLS-------RNKENHSQPTQSSLEDSVTPTKA 109
M + + + S L+ L NK + T ++ +
Sbjct: 63 MFHVTLKIEMKKMNKLQNISEELQRNISLQLMSNMNISNKIRNLSTTLQTIATKLCRELY 122
Query: 110 VKTTGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVK 169
K PCP WI ++ SCY S + +W SK C ++LLKI++ N L FI
Sbjct: 123 SKEQEHKCKPCPRRWIWHKDSCYFLSDDVQTWQESKMACAAQNASLLKINNKNALEFIKS 182
Query: 170 QVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIY 229
Q S +W+GLS + + D + +S+ + IR N C +I+ +
Sbjct: 183 QSRSY---DYWLGLSPEEDSTRGMRVD-NIINSSAWVIRNAPDLNN--MYCGYINRLYVQ 236
Query: 230 DQLCSVPSYSICEK 243
C+ ICEK
Sbjct: 237 YYHCTYKKRMICEK 250
>gi|4504879 killer cell lectin-like receptor subfamily B, member 1
[Homo sapiens]
Length = 225
Score = 72.0 bits (175), Expect = 4e-13
Identities = 61/234 (26%), Positives = 103/234 (44%), Gaps = 27/234 (11%)
Query: 15 YTQLHFDSQSNTRIAVVSE--KGSCAASPPWRLIAVILGILCLVILVIAVVLGTMAIWRS 72
Y +L+ + S + S + C SP W A+ L +++LV+ VV G S
Sbjct: 7 YAELNLPTDSGPESSSPSSLPRDVCQGSP-WHQFALKLSCAGIILLVL-VVTGLSVSVTS 64
Query: 73 NSGSNTLENGYFLSRNKENHSQPTQSSLEDSVTPTKAVKTTGVLSSPCPPNWIIYEKSCY 132
+++E + S++ + K + G+L+ CP W + C
Sbjct: 65 LIQKSSIE----------------KCSVDIQQSRNKTTERPGLLN--CPIYWQQLREKCL 106
Query: 133 LFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRPQTEVPW 192
LFS ++N W+ S C S+LL I +EL + + FWIGL+ +E W
Sbjct: 107 LFSHTVNPWNNSLADCSTKESSLLLIRDKDEL-IHTQNLIRDKAILFWIGLNFSLSEKNW 165
Query: 193 LWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICEKKFS 246
W +GS +SN +IR A + +C+ I + +Y + CS IC+K+ +
Sbjct: 166 KWINGSFLNSNDLEIRGDAKEN----SCISISQTSVYSEYCSTEIRWICQKELT 215
>gi|75709169 killer cell lectin-like receptor subfamily C, member 2
[Homo sapiens]
Length = 231
Score = 70.9 bits (172), Expect = 1e-12
Identities = 52/204 (25%), Positives = 81/204 (39%), Gaps = 40/204 (19%)
Query: 41 PPWRLIAVILGILCLVILVIAVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPTQSSL 100
PP +L A +LGI+C+V++ A VL T+ + FL +N + + TQ +
Sbjct: 67 PPEKLTAEVLGIICIVLM--ATVLKTIVLIP------------FLEQNNFSPNTRTQKAR 112
Query: 101 EDSVTPTKAVKTTGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDS 160
CP WI Y SCY +W+ S C S+LL ID+
Sbjct: 113 H---------------CGHCPEEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSIDN 157
Query: 161 SNELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNC 220
E+ F+ + S WIG+ R + PW+ +G F + +N NC
Sbjct: 158 EEEMKFLASILPSS-----WIGVFRNSSHHPWVTINGLAFKHKI------KDSDNAELNC 206
Query: 221 VWIHVSVIYDQLCSVPSYSICEKK 244
+ V+ + C C+ K
Sbjct: 207 AVLQVNRLKSAQCGSSMIYHCKHK 230
>gi|223029517 CD209 molecule isoform 8 [Homo sapiens]
Length = 243
Score = 70.1 bits (170), Expect = 2e-12
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
Query: 91 NHSQPTQSSLEDSVTPTKAVKTTGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQ 150
+ Q Q ++ ++T KA L PCP W ++ +CY S S +W S C +
Sbjct: 68 SQEQSRQDAIYQNLTQLKAAVER--LCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKE 125
Query: 151 LGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTT 210
+G+ L+ I S+ E F+ Q SS+ + W+GLS E W W DGS + Q
Sbjct: 126 VGAQLVVIKSAEEQNFLQLQ-SSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNR 184
Query: 211 ATQEN-PSPNCVWIHVSVIYDQLCSVPSYSICEK 243
N +C + D C++ + IC+K
Sbjct: 185 GEPNNVGEEDCAEFSGNGWNDDKCNLAKFWICKK 218
>gi|10281669 C-type lectin, superfamily member 5 [Homo sapiens]
Length = 188
Score = 70.1 bits (170), Expect = 2e-12
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 43 WRLIAVILGILCLVILVIAVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPTQSSLED 102
W +I I G++ +V+ V+ + L + + + SN +G+ +R+ SQ SS
Sbjct: 3 WHMI--ISGLIVVVLKVVGMTLFLLYFPQIFNKSN---DGFTTTRSYGTVSQIFGSS--- 54
Query: 103 SVTPTKAVKTTGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSN 162
S +P + TT + CP +W Y+ C+ S S +SW+ S+ C GS L +++
Sbjct: 55 SPSPNGFI-TTRSYGTVCPKDWEFYQARCFFLSTSESSWNESRDFCKGKGSTLAIVNTPE 113
Query: 163 ELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVW 222
+L F+ ++ ++IGL + E W W + S F+ N+ T +N + NC
Sbjct: 114 KLKFLQDITDAE---KYFIGLIYHREEKRWRWINNSVFNGNV-------TNQNQNFNCAT 163
Query: 223 IHVSVIYDQL-CSVPSYSICEK 243
I ++ +D C + ICEK
Sbjct: 164 IGLTKTFDAASCDISYRRICEK 185
>gi|47717094 killer cell lectin-like receptor subfamily C, member 1
isoform NKG2-A [Homo sapiens]
Length = 233
Score = 68.9 bits (167), Expect = 4e-12
Identities = 55/208 (26%), Positives = 81/208 (38%), Gaps = 44/208 (21%)
Query: 40 SPPWRLIAVILGILCLVIL---VIAVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPT 96
S P +LI ILGI+CL+++ V VV+ + I R N+ S
Sbjct: 66 SAPEKLIVGILGIICLILMASVVTIVVIPSTLIQRHNNSSLN------------------ 107
Query: 97 QSSLEDSVTPTKAVKTTGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLL 156
T T+ + G CP WI Y SCY +W+ S C S+LL
Sbjct: 108 --------TRTQKARHCG----HCPEEWITYSNSCYYIGKERRTWEESLLACTSKNSSLL 155
Query: 157 KIDSSNELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENP 216
ID+ E+ F+ S S WIG+ R + PW+ +G F + +N
Sbjct: 156 SIDNEEEMKFL-----SIISPSSWIGVFRNSSHHPWVTMNGLAFKHEI------KDSDNA 204
Query: 217 SPNCVWIHVSVIYDQLCSVPSYSICEKK 244
NC + V+ + C C+ K
Sbjct: 205 ELNCAVLQVNRLKSAQCGSSIIYHCKHK 232
>gi|4504881 killer cell lectin-like receptor subfamily C, member 1
isoform NKG2-A [Homo sapiens]
Length = 233
Score = 68.9 bits (167), Expect = 4e-12
Identities = 55/208 (26%), Positives = 81/208 (38%), Gaps = 44/208 (21%)
Query: 40 SPPWRLIAVILGILCLVIL---VIAVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPT 96
S P +LI ILGI+CL+++ V VV+ + I R N+ S
Sbjct: 66 SAPEKLIVGILGIICLILMASVVTIVVIPSTLIQRHNNSSLN------------------ 107
Query: 97 QSSLEDSVTPTKAVKTTGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLL 156
T T+ + G CP WI Y SCY +W+ S C S+LL
Sbjct: 108 --------TRTQKARHCG----HCPEEWITYSNSCYYIGKERRTWEESLLACTSKNSSLL 155
Query: 157 KIDSSNELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENP 216
ID+ E+ F+ S S WIG+ R + PW+ +G F + +N
Sbjct: 156 SIDNEEEMKFL-----SIISPSSWIGVFRNSSHHPWVTMNGLAFKHEI------KDSDNA 204
Query: 217 SPNCVWIHVSVIYDQLCSVPSYSICEKK 244
NC + V+ + C C+ K
Sbjct: 205 ELNCAVLQVNRLKSAQCGSSIIYHCKHK 232
>gi|223278342 C-type lectin domain family 4, member M isoform 11
[Homo sapiens]
Length = 332
Score = 68.9 bits (167), Expect = 4e-12
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 95 PTQSSLED---SVTPTKAVKTTGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQL 151
P +S L++ +T KA L CP +W ++ +CY S S +W S C ++
Sbjct: 175 PEKSKLQEIYQELTQLKAAVER--LCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEV 232
Query: 152 GSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTA 211
+ L+ I ++ E F+ Q +S+ + W+GLS E W W DGS S + FQ +
Sbjct: 233 RAQLVVIKTAEEQNFLQLQ-TSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPS-FQRYWNS 290
Query: 212 TQENPSPN--CVWIHVSVIYDQLCSVPSYSICEK 243
+ N S N C S D C V +Y IC+K
Sbjct: 291 GEPNNSGNEDCAEFSGSGWNDNRCDVDNYWICKK 324
>gi|223278347 C-type lectin domain family 4, member M isoform 9
[Homo sapiens]
Length = 353
Score = 68.6 bits (166), Expect = 5e-12
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 120 CPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSF 179
CP +W ++ +CY S S +W S C ++ + L+ I ++ E F+ Q +S+ +
Sbjct: 222 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQ-TSRSNRFS 280
Query: 180 WIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPN--CVWIHVSVIYDQLCSVPS 237
W+GLS E W W DGS S + FQ + + N S N C S D C V +
Sbjct: 281 WMGLSDLNQEGTWQWVDGSPLSPS-FQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDN 339
Query: 238 YSICEK 243
Y IC+K
Sbjct: 340 YWICKK 345
>gi|223278339 C-type lectin domain family 4, member M isoform 7
[Homo sapiens]
Length = 263
Score = 68.6 bits (166), Expect = 5e-12
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 120 CPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSF 179
CP +W ++ +CY S S +W S C ++ + L+ I ++ E F+ Q +S+ +
Sbjct: 132 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQ-TSRSNRFS 190
Query: 180 WIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPN--CVWIHVSVIYDQLCSVPS 237
W+GLS E W W DGS S + FQ + + N S N C S D C V +
Sbjct: 191 WMGLSDLNQEGTWQWVDGSPLSPS-FQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDN 249
Query: 238 YSICEK 243
Y IC+K
Sbjct: 250 YWICKK 255
>gi|223278337 C-type lectin domain family 4, member M isoform 12
[Homo sapiens]
Length = 375
Score = 68.6 bits (166), Expect = 5e-12
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 120 CPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSF 179
CP +W ++ +CY S S +W S C ++ + L+ I ++ E F+ Q +S+ +
Sbjct: 244 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQ-TSRSNRFS 302
Query: 180 WIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPN--CVWIHVSVIYDQLCSVPS 237
W+GLS E W W DGS S + FQ + + N S N C S D C V +
Sbjct: 303 WMGLSDLNQEGTWQWVDGSPLSPS-FQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDN 361
Query: 238 YSICEK 243
Y IC+K
Sbjct: 362 YWICKK 367
>gi|223278335 C-type lectin domain family 4, member M isoform 2
[Homo sapiens]
Length = 348
Score = 68.6 bits (166), Expect = 5e-12
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 120 CPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSF 179
CP +W ++ +CY S S +W S C ++ + L+ I ++ E F+ Q +S+ +
Sbjct: 217 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQ-TSRSNRFS 275
Query: 180 WIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPN--CVWIHVSVIYDQLCSVPS 237
W+GLS E W W DGS S + FQ + + N S N C S D C V +
Sbjct: 276 WMGLSDLNQEGTWQWVDGSPLSPS-FQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDN 334
Query: 238 YSICEK 243
Y IC+K
Sbjct: 335 YWICKK 340
>gi|223278350 C-type lectin domain family 4, member M isoform 8
[Homo sapiens]
Length = 376
Score = 68.6 bits (166), Expect = 5e-12
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 120 CPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSF 179
CP +W ++ +CY S S +W S C ++ + L+ I ++ E F+ Q +S+ +
Sbjct: 245 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQ-TSRSNRFS 303
Query: 180 WIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPN--CVWIHVSVIYDQLCSVPS 237
W+GLS E W W DGS S + FQ + + N S N C S D C V +
Sbjct: 304 WMGLSDLNQEGTWQWVDGSPLSPS-FQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDN 362
Query: 238 YSICEK 243
Y IC+K
Sbjct: 363 YWICKK 368
>gi|42542390 C-type lectin domain family 4, member M isoform 1 [Homo
sapiens]
Length = 399
Score = 68.6 bits (166), Expect = 5e-12
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 120 CPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSF 179
CP +W ++ +CY S S +W S C ++ + L+ I ++ E F+ Q +S+ +
Sbjct: 268 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQ-TSRSNRFS 326
Query: 180 WIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPN--CVWIHVSVIYDQLCSVPS 237
W+GLS E W W DGS S + FQ + + N S N C S D C V +
Sbjct: 327 WMGLSDLNQEGTWQWVDGSPLSPS-FQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDN 385
Query: 238 YSICEK 243
Y IC+K
Sbjct: 386 YWICKK 391
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,219,420
Number of Sequences: 37866
Number of extensions: 426160
Number of successful extensions: 1665
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1424
Number of HSP's gapped (non-prelim): 167
length of query: 247
length of database: 18,247,518
effective HSP length: 100
effective length of query: 147
effective length of database: 14,460,918
effective search space: 2125754946
effective search space used: 2125754946
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.