Guide to the Human Genome
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Name: KLRB1 Sequence: fasta or formatted (225aa) NCBI GI: 4504879
Description:

killer cell lectin-like receptor subfamily B, member 1

Referenced in:

Lectin Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1          7           1
 C cysteine            4.0          9           1
 D aspartate           4.9         11           1
 E glutamate           5.8         13           1
 F phenylalanine       2.2          5           1
 G glycine             3.6          8           1
 H histidine           1.3          3           1
 I isoleucine          8.0         18           2
 K lysine              5.8         13           1
 L leucine            12.0         27           3
 M methionine          0.4          1           1
 N asparagine          6.2         14           2
 P proline             4.4         10           1
 Q glutamine           5.3         12           2
 R arginine            4.0          9           1
 S serine             13.8         31           3
 T threonine           4.9         11           2
 V valine              4.9         11           2
 W tryptophan          3.1          7           1
 Y tyrosine            2.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   killer cell lectin-like receptor subfamily B, member ... 
KLRF1                 0.172   killer cell lectin-like receptor subfamily F, member ...
KLRG1                 0.117   killer cell lectin-like receptor subfamily G, member...
CLEC7A                0.108   dendritic cell-associated C-type lectin 1 isoform a ...
CLEC12B               0.101   C-type lectin domain family 12, member B isoform 1 ...
CLEC7A                0.099   dendritic cell-associated C-type lectin 1 isoform b ...
CLEC7A                0.096   dendritic cell-associated C-type lectin 1 isoform e ...
KLRD1                 0.089   killer cell lectin-like receptor subfamily D, membe...
KLRD1                 0.089   killer cell lectin-like receptor subfamily D, member ...
CLEC5A                0.089   C-type lectin, superfamily member 5 
CLEC4M                0.085   C-type lectin domain family 4, member M isoform 7 [...
KLRD1                 0.080   killer cell lectin-like receptor subfamily D, member ...
OLR1                  0.080   oxidized low density lipoprotein (lectin-like) recept...
KLRC1                 0.080   killer cell lectin-like receptor subfamily C, member...
KLRC1                 0.080   killer cell lectin-like receptor subfamily C, member ...
KLRK1                 0.078   NKG2-D type II integral membrane protein 
CLEC2B                0.078   C-type lectin, superfamily member 2 
CLEC4M                0.076   C-type lectin domain family 4, member M isoform 11 ...
CLEC9A                0.073   C-type lectin domain family 9, member A 
CLEC1B                0.069   C-type lectin domain family 1, member B isoform a [...
CD209                 0.067   CD209 molecule isoform 8 
CLEC2D                0.067   osteoclast inhibitory lectin isoform 1 
CLEC4M                0.067   C-type lectin domain family 4, member M isoform 9 [...
CLEC4M                0.067   C-type lectin domain family 4, member M isoform 12 ...
CLEC4M                0.067   C-type lectin domain family 4, member M isoform 2 [...
CLEC4M                0.067   C-type lectin domain family 4, member M isoform 8 [...
CLEC4M                0.067   C-type lectin domain family 4, member M isoform 1 [H...
COLEC12               0.067   collectin sub-family member 12 
CLEC2L                0.067   C-type lectin domain family 2, member L 
CLEC1B                0.064   C-type lectin domain family 1, member B isoform b [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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