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Search of human proteins with 37595750
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|37595750 lamin B receptor [Homo sapiens]
(615 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|37595752 lamin B receptor [Homo sapiens] 1249 0.0
gi|37595750 lamin B receptor [Homo sapiens] 1249 0.0
gi|117414150 transmembrane 7 superfamily member 2 [Homo sapiens] 496 e-140
gi|119943112 7-dehydrocholesterol reductase [Homo sapiens] 262 8e-70
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 43 7e-04
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 40 0.008
gi|98986459 jumonji domain containing 2A [Homo sapiens] 39 0.011
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 39 0.018
gi|226437579 NAC alpha domain containing [Homo sapiens] 38 0.024
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] 38 0.024
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] 38 0.024
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] 38 0.024
gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens] 38 0.024
gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens] 38 0.031
gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens] 37 0.041
gi|62460633 RNA-binding motif protein 16 [Homo sapiens] 37 0.041
gi|226442889 jumonji domain containing 2C isoform 2 [Homo sapiens] 37 0.054
gi|109255247 jumonji domain containing 2C isoform 1 [Homo sapiens] 37 0.054
gi|45504380 jumonji domain containing 2B [Homo sapiens] 37 0.054
gi|72534660 splicing factor, arginine/serine-rich 7 [Homo sapiens] 37 0.054
gi|88758580 cyclin L2 isoform A [Homo sapiens] 36 0.091
gi|134152708 arginine and glutamate rich 1 [Homo sapiens] 36 0.091
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 35 0.27
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 35 0.27
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 35 0.27
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 35 0.27
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 34 0.35
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 34 0.35
gi|60097902 filaggrin [Homo sapiens] 34 0.45
gi|239756568 PREDICTED: similar to BCL2-associated transcription... 34 0.45
>gi|37595752 lamin B receptor [Homo sapiens]
Length = 615
Score = 1249 bits (3232), Expect = 0.0
Identities = 615/615 (100%), Positives = 615/615 (100%)
Query: 1 MPSRKFADGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKDGTELELKENDIKPLTSF 60
MPSRKFADGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKDGTELELKENDIKPLTSF
Sbjct: 1 MPSRKFADGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKDGTELELKENDIKPLTSF 60
Query: 61 RQRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQADIKEARREVEVKLTPL 120
RQRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQADIKEARREVEVKLTPL
Sbjct: 61 RQRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQADIKEARREVEVKLTPL 120
Query: 121 ILKPFGNSISRYNGEPEHIERNDAPHKNTQEKFSLSQESSYIATQYSLRPRREEVKLKEI 180
ILKPFGNSISRYNGEPEHIERNDAPHKNTQEKFSLSQESSYIATQYSLRPRREEVKLKEI
Sbjct: 121 ILKPFGNSISRYNGEPEHIERNDAPHKNTQEKFSLSQESSYIATQYSLRPRREEVKLKEI 180
Query: 181 DSKEEKYVAKELAVRTFEVTPIRAKDLEFGGVPGVFLIMFGLPVFLFLLLLMCKQKDPSL 240
DSKEEKYVAKELAVRTFEVTPIRAKDLEFGGVPGVFLIMFGLPVFLFLLLLMCKQKDPSL
Sbjct: 181 DSKEEKYVAKELAVRTFEVTPIRAKDLEFGGVPGVFLIMFGLPVFLFLLLLMCKQKDPSL 240
Query: 241 LNFPPPLPALYELWETRVFGVYLLWFLIQVLFYLLPIGKVVEGTPLIDGRRLKYRLNGFY 300
LNFPPPLPALYELWETRVFGVYLLWFLIQVLFYLLPIGKVVEGTPLIDGRRLKYRLNGFY
Sbjct: 241 LNFPPPLPALYELWETRVFGVYLLWFLIQVLFYLLPIGKVVEGTPLIDGRRLKYRLNGFY 300
Query: 301 AFILTSAVIGTSLFQGVEFHYVYSHFLQFALAATVFCVVLSVYLYMRSLKAPRNDLSPAS 360
AFILTSAVIGTSLFQGVEFHYVYSHFLQFALAATVFCVVLSVYLYMRSLKAPRNDLSPAS
Sbjct: 301 AFILTSAVIGTSLFQGVEFHYVYSHFLQFALAATVFCVVLSVYLYMRSLKAPRNDLSPAS 360
Query: 361 SGNAVYDFFIGRELNPRIGTFDLKYFCELRPGLIGWVVINLVMLLAEMKIQDRAVPSLAM 420
SGNAVYDFFIGRELNPRIGTFDLKYFCELRPGLIGWVVINLVMLLAEMKIQDRAVPSLAM
Sbjct: 361 SGNAVYDFFIGRELNPRIGTFDLKYFCELRPGLIGWVVINLVMLLAEMKIQDRAVPSLAM 420
Query: 421 ILVNSFQLLYVVDALWNEEALLTTMDIIHDGFGFMLAFGDLVWVPFIYSFQAFYLVSHPN 480
ILVNSFQLLYVVDALWNEEALLTTMDIIHDGFGFMLAFGDLVWVPFIYSFQAFYLVSHPN
Sbjct: 421 ILVNSFQLLYVVDALWNEEALLTTMDIIHDGFGFMLAFGDLVWVPFIYSFQAFYLVSHPN 480
Query: 481 EVSWPMASLIIVLKLCGYVIFRGANSQKNAFRKNPSDPKLAHLKTIHTSTGKNLLVSGWW 540
EVSWPMASLIIVLKLCGYVIFRGANSQKNAFRKNPSDPKLAHLKTIHTSTGKNLLVSGWW
Sbjct: 481 EVSWPMASLIIVLKLCGYVIFRGANSQKNAFRKNPSDPKLAHLKTIHTSTGKNLLVSGWW 540
Query: 541 GFVRHPNYLGDLIMALAWSLPCGFNHILPYFYIIYFTMLLVHREARDEYHCKKKYGVAWE 600
GFVRHPNYLGDLIMALAWSLPCGFNHILPYFYIIYFTMLLVHREARDEYHCKKKYGVAWE
Sbjct: 541 GFVRHPNYLGDLIMALAWSLPCGFNHILPYFYIIYFTMLLVHREARDEYHCKKKYGVAWE 600
Query: 601 KYCQRVPYRIFPYIY 615
KYCQRVPYRIFPYIY
Sbjct: 601 KYCQRVPYRIFPYIY 615
>gi|37595750 lamin B receptor [Homo sapiens]
Length = 615
Score = 1249 bits (3232), Expect = 0.0
Identities = 615/615 (100%), Positives = 615/615 (100%)
Query: 1 MPSRKFADGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKDGTELELKENDIKPLTSF 60
MPSRKFADGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKDGTELELKENDIKPLTSF
Sbjct: 1 MPSRKFADGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKDGTELELKENDIKPLTSF 60
Query: 61 RQRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQADIKEARREVEVKLTPL 120
RQRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQADIKEARREVEVKLTPL
Sbjct: 61 RQRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQADIKEARREVEVKLTPL 120
Query: 121 ILKPFGNSISRYNGEPEHIERNDAPHKNTQEKFSLSQESSYIATQYSLRPRREEVKLKEI 180
ILKPFGNSISRYNGEPEHIERNDAPHKNTQEKFSLSQESSYIATQYSLRPRREEVKLKEI
Sbjct: 121 ILKPFGNSISRYNGEPEHIERNDAPHKNTQEKFSLSQESSYIATQYSLRPRREEVKLKEI 180
Query: 181 DSKEEKYVAKELAVRTFEVTPIRAKDLEFGGVPGVFLIMFGLPVFLFLLLLMCKQKDPSL 240
DSKEEKYVAKELAVRTFEVTPIRAKDLEFGGVPGVFLIMFGLPVFLFLLLLMCKQKDPSL
Sbjct: 181 DSKEEKYVAKELAVRTFEVTPIRAKDLEFGGVPGVFLIMFGLPVFLFLLLLMCKQKDPSL 240
Query: 241 LNFPPPLPALYELWETRVFGVYLLWFLIQVLFYLLPIGKVVEGTPLIDGRRLKYRLNGFY 300
LNFPPPLPALYELWETRVFGVYLLWFLIQVLFYLLPIGKVVEGTPLIDGRRLKYRLNGFY
Sbjct: 241 LNFPPPLPALYELWETRVFGVYLLWFLIQVLFYLLPIGKVVEGTPLIDGRRLKYRLNGFY 300
Query: 301 AFILTSAVIGTSLFQGVEFHYVYSHFLQFALAATVFCVVLSVYLYMRSLKAPRNDLSPAS 360
AFILTSAVIGTSLFQGVEFHYVYSHFLQFALAATVFCVVLSVYLYMRSLKAPRNDLSPAS
Sbjct: 301 AFILTSAVIGTSLFQGVEFHYVYSHFLQFALAATVFCVVLSVYLYMRSLKAPRNDLSPAS 360
Query: 361 SGNAVYDFFIGRELNPRIGTFDLKYFCELRPGLIGWVVINLVMLLAEMKIQDRAVPSLAM 420
SGNAVYDFFIGRELNPRIGTFDLKYFCELRPGLIGWVVINLVMLLAEMKIQDRAVPSLAM
Sbjct: 361 SGNAVYDFFIGRELNPRIGTFDLKYFCELRPGLIGWVVINLVMLLAEMKIQDRAVPSLAM 420
Query: 421 ILVNSFQLLYVVDALWNEEALLTTMDIIHDGFGFMLAFGDLVWVPFIYSFQAFYLVSHPN 480
ILVNSFQLLYVVDALWNEEALLTTMDIIHDGFGFMLAFGDLVWVPFIYSFQAFYLVSHPN
Sbjct: 421 ILVNSFQLLYVVDALWNEEALLTTMDIIHDGFGFMLAFGDLVWVPFIYSFQAFYLVSHPN 480
Query: 481 EVSWPMASLIIVLKLCGYVIFRGANSQKNAFRKNPSDPKLAHLKTIHTSTGKNLLVSGWW 540
EVSWPMASLIIVLKLCGYVIFRGANSQKNAFRKNPSDPKLAHLKTIHTSTGKNLLVSGWW
Sbjct: 481 EVSWPMASLIIVLKLCGYVIFRGANSQKNAFRKNPSDPKLAHLKTIHTSTGKNLLVSGWW 540
Query: 541 GFVRHPNYLGDLIMALAWSLPCGFNHILPYFYIIYFTMLLVHREARDEYHCKKKYGVAWE 600
GFVRHPNYLGDLIMALAWSLPCGFNHILPYFYIIYFTMLLVHREARDEYHCKKKYGVAWE
Sbjct: 541 GFVRHPNYLGDLIMALAWSLPCGFNHILPYFYIIYFTMLLVHREARDEYHCKKKYGVAWE 600
Query: 601 KYCQRVPYRIFPYIY 615
KYCQRVPYRIFPYIY
Sbjct: 601 KYCQRVPYRIFPYIY 615
>gi|117414150 transmembrane 7 superfamily member 2 [Homo sapiens]
Length = 418
Score = 496 bits (1278), Expect = e-140
Identities = 242/410 (59%), Positives = 297/410 (72%), Gaps = 3/410 (0%)
Query: 207 LEFGGVPGVFLIMFGLPVFLFLLLLMCKQKDPSLLNFPPPLPALYELWETRVFGVYLLWF 266
LEFGG G ++ LP +F LLL + LL P LP L LW R ++L W
Sbjct: 11 LEFGGPLGAAALLLLLPATMFHLLLAARSGPARLLGPPASLPGLEVLWSPRALLLWLAWL 70
Query: 267 LIQVLFYLLPIGKVVEGTPLIDGRRLKYRLNGFYAFILTSAVIGTSLFQGVEFHYVYSHF 326
+Q YLLP KV EG L D RL+Y +NGF A +LT+ ++G + G+ +
Sbjct: 71 GLQAALYLLPARKVAEGQELKDKSRLRYPINGFQALVLTALLVGLGMSAGLPLGALPEML 130
Query: 327 LQFALAATVFCVVLSVYLYMRSLKAPRNDLSPA-SSGNAVYDFFIGRELNPRIGTFDLKY 385
L A AT+ + S++LYM++ AP + L+P +SGN +YDFF+GRELNPRI FD KY
Sbjct: 131 LPLAFVATLTAFIFSLFLYMKAQVAPVSALAPGGNSGNPIYDFFLGRELNPRICFFDFKY 190
Query: 386 FCELRPGLIGWVVINLVMLLAEMKIQDRAVPSLAMILVNSFQLLYVVDALWNEEALLTTM 445
FCELRPGLIGWV+INL +L+ E ++ R PSLAM LVN FQLLYV DALW+EEA+LTTM
Sbjct: 191 FCELRPGLIGWVLINLALLMKEAEL--RGSPSLAMWLVNGFQLLYVGDALWHEEAVLTTM 248
Query: 446 DIIHDGFGFMLAFGDLVWVPFIYSFQAFYLVSHPNEVSWPMASLIIVLKLCGYVIFRGAN 505
DI HDGFGFMLAFGD+ WVPF YS QA +L+ HP + PMAS+I ++ GY IFRGAN
Sbjct: 249 DITHDGFGFMLAFGDMAWVPFTYSLQAQFLLHHPQPLGLPMASVICLINATGYYIFRGAN 308
Query: 506 SQKNAFRKNPSDPKLAHLKTIHTSTGKNLLVSGWWGFVRHPNYLGDLIMALAWSLPCGFN 565
SQKN FRKNPSDP++A L+TI T+TG+ LLVSGWWG VRHPNYLGDLIMALAWSLPCG +
Sbjct: 309 SQKNTFRKNPSDPRVAGLETISTATGRKLLVSGWWGMVRHPNYLGDLIMALAWSLPCGVS 368
Query: 566 HILPYFYIIYFTMLLVHREARDEYHCKKKYGVAWEKYCQRVPYRIFPYIY 615
H+LPYFY++YFT LLVHREARDE C +KYG+AW++YC+RVPYRI PYIY
Sbjct: 369 HLLPYFYLLYFTALLVHREARDERQCLQKYGLAWQEYCRRVPYRIMPYIY 418
>gi|119943112 7-dehydrocholesterol reductase [Homo sapiens]
Length = 475
Score = 262 bits (669), Expect = 8e-70
Identities = 155/449 (34%), Positives = 233/449 (51%), Gaps = 40/449 (8%)
Query: 203 RAKDLEFGGVPGVFLIMFGLPVFLFLLLLMCKQKDPSL----LNFPPPLPALYELWET-- 256
RA ++++ + V ++ P ++ ++ C Q +L ++ L ++W
Sbjct: 31 RAWEVDWFSLASVIFLLLFAPFIVYYFIMACDQYSCALTGPVVDIVTGHARLSDIWAKTP 90
Query: 257 ----RVFGVYLLWFLIQVLFY---------LLP--IGKVVEGTPLIDGRRLKYRLNGFYA 301
+ +Y LW QVL Y LP +G + EG G KY++NG A
Sbjct: 91 PITRKAAQLYTLWVTFQVLLYTSLPDFCHKFLPGYVGGIQEGAVTPAGVVNKYQINGLQA 150
Query: 302 FILTSAV--IGTSLFQGVEFHYVYSHFLQFALAATVFCVVLSVYLYMRSLKAPRNDLSPA 359
++LT + L ++ +++ A + +S + ++ P +
Sbjct: 151 WLLTHLLWFANAHLLSWFSPTIIFDNWIPLLWCANILGYAVSTFAMVKGYFFPTSARDCK 210
Query: 360 SSGNAVYDFFIGRELNPRIGT-FDLKYFCELRPGLIGWVVINLVMLLAEMKIQDRAVPSL 418
+GN Y++ +G E NPRIG FD K F RPG++ W +INL + ++
Sbjct: 211 FTGNFFYNYMMGIEFNPRIGKWFDFKLFFNGRPGIVAWTLINLSFAAKQRELHSHVTN-- 268
Query: 419 AMILVNSFQLLYVVDALWNEEALLTTMDIIHDGFGFMLAFGDLVWVPFIYSFQAFYLVSH 478
AM+LVN Q +YV+D WNE L T+DI HD FG+ L +GD VW+P++Y+ Q YLV H
Sbjct: 269 AMVLVNVLQAIYVIDFFWNETWYLKTIDICHDHFGWYLGWGDCVWLPYLYTLQGLYLVYH 328
Query: 479 PNEVSWPMASLIIVLKLCGYVIFRGANSQKNAFRKNPS-------DPKLAHLKTIHTSTG 531
P ++S P A +++L L GY IFR AN QK+ FR+ PK+ ++ +TS
Sbjct: 329 PVQLSTPHAVGVLLLGLVGYYIFRVANHQKDLFRRTDGRCLIWGRKPKV--IECSYTSAD 386
Query: 532 -----KNLLVSGWWGFVRHPNYLGDLIMALAWSLPCGFNHILPYFYIIYFTMLLVHREAR 586
LLVSG+WG RH NY+GDL+ +LA+ L CG H+LPYFYIIY +LL HR R
Sbjct: 387 GQRHHSKLLVSGFWGVARHFNYVGDLMGSLAYCLACGGGHLLPYFYIIYMAILLTHRCLR 446
Query: 587 DEYHCKKKYGVAWEKYCQRVPYRIFPYIY 615
DE+ C KYG WE+Y VPYR+ P I+
Sbjct: 447 DEHRCASKYGRDWERYTAAVPYRLLPGIF 475
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 43.1 bits (100), Expect = 7e-04
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 61 RQRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQADIKEARREVEVKLTPL 120
R RK GS +SS +RRR SRSRSRSRS R +S R S ++ +E RR +P
Sbjct: 558 RDRKPGSHASSSARRR-SRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRRRRSASP- 615
Query: 121 ILKPFGNSISRYNGEPEHIERNDAPHKNTQEKFSLSQ 157
P +S S E + D ++K S S+
Sbjct: 616 --PPATSSSSSSRRERHRGKHRDGGGSKKKKKRSRSR 650
Score = 31.2 bits (69), Expect = 2.9
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 17/73 (23%)
Query: 43 DGTELELKENDIKPLTSFRQRKGGSTSSSPSRRRGS-----------------RSRSRSR 85
D L +E K R+R G ++SSS SR +GS R R RS
Sbjct: 733 DSEGLSGEERGGKSSQKDRRRSGAASSSSSSREKGSRRKALDGGDRDRDRDRDRDRDRSS 792
Query: 86 SPGRPPKSARRSA 98
RPPK + S+
Sbjct: 793 KKARPPKESAPSS 805
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 39.7 bits (91), Expect = 0.008
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 63 RKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQADIKEARREVEVKLTPLIL 122
+K S S SR R RSRSRSR+ G+ +S + S+ H+ + KE +
Sbjct: 420 KKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNK---------- 469
Query: 123 KPFGNSISRYNGEPEHIERNDAPHKNTQEKFSLSQESSY 161
+ S R + + +R +P K K S S+E S+
Sbjct: 470 RSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKERSH 508
Score = 30.4 bits (67), Expect = 5.0
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 30 HDSTS---QLYTVKYKDGTELELKENDIKPLTSFRQRKGGSTSSSPSRRRGSRSRSRSRS 86
H S+S +L K + E E KE + + R+R RR SR R RSRS
Sbjct: 286 HGSSSFDRELEREKERQRLEREAKEREKE-----RRRSRSIDRGLERRRSRSRERHRSRS 340
Query: 87 PGRPPKSARRSASASHQADIKEARR 111
R K RR + + + RR
Sbjct: 341 RSRDRKGDRRDRDREREKENERGRR 365
>gi|98986459 jumonji domain containing 2A [Homo sapiens]
Length = 1064
Score = 39.3 bits (90), Expect = 0.011
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 7 ADGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKDGTELELKENDIKPL 57
A+GEVV+ RW +Y + SH Q+Y V+++DG++L +K +D+ L
Sbjct: 958 AEGEVVQVRWTDGQVYGAKFVASHPI--QMYQVEFEDGSQLVVKRDDVYTL 1006
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 38.5 bits (88), Expect = 0.018
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 64 KGGSTSSSPSRRRG-SRSRS---RSRSPGRPPKSARRSASASHQADIKEARREVEVKLTP 119
+ GS S S SR R SRSRS +SRSP + KS RS SA + + E +++
Sbjct: 223 RSGSRSRSKSRSRSQSRSRSKKEKSRSPSK-EKSRSRSHSAGKSRSKSKDQAEEKIQNND 281
Query: 120 LILKPFGNSISRYNGEPEHIERNDAPHKNTQEKFSLSQESSYIATQYSLRPRREEVKLK 178
+ KP S SR+ + + R+ +++ S+S+ S + SLR R + K
Sbjct: 282 NVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRS---QEKSLRQSRSRSRSK 337
Score = 33.5 bits (75), Expect = 0.59
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 13/111 (11%)
Query: 59 SFRQRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQADIKEARREVEVKLT 118
S RK S S S S+ S+SRSRSRS G +S RS S S KE R + +
Sbjct: 198 SRHSRKSRSRSGS-SKSSHSKSRSRSRS-GSRSRSKSRSRSQSRSRSKKEKSRSPSKEKS 255
Query: 119 PLILKPFGNSISRYNGEPEH-IERND----------APHKNTQEKFSLSQE 158
G S S+ + E I+ ND + HK+ + S SQE
Sbjct: 256 RSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQE 306
Score = 31.2 bits (69), Expect = 2.9
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 62 QRKGGSTSSSPSRRRGSRSRSRSRS---PGRPPKSARRSASASHQADIKEAR 110
QR+G S + + +RSRSRS S P P +S RS SAS ++R
Sbjct: 424 QREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSR 475
Score = 30.8 bits (68), Expect = 3.8
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 50 KENDIKPLTSFRQRKGGSTSSSPSR---------RRGSR--SRSRSRSPGRPPKSARRSA 98
+E ++ S + KGGS S S SR R+ SR SRSRSRS + +S +R +
Sbjct: 323 QEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGS 382
Query: 99 SASHQADIKEARRE 112
+A + +++
Sbjct: 383 KRDSKAGSSKKKKK 396
Score = 30.0 bits (66), Expect = 6.5
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 59 SFRQRKGGS-----TSSSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQADIKEARREV 113
S R RK GS SS +++ RS+SRSP R R A + ++ +E R E
Sbjct: 374 SERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKS--ESSQREGRGES 431
Query: 114 EVKLT--PLILKPFGNSISRYNGEPEHIERNDAPHKNTQEKFSLSQESS 160
E T + NS S+ N E R+ + K S S+ +S
Sbjct: 432 ENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSAS 480
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 38.1 bits (87), Expect = 0.024
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 5/163 (3%)
Query: 28 LSHDSTSQLYTVKYKDG---TELELKENDI-KPLTSFRQRKGGSTSSSPSRRRGSRSRSR 83
L DS L + ++ D + EL E DI P T + + S + + +SRS
Sbjct: 1355 LEEDSPRALGSGQHSDSHGESSAELDEQDILAPQTVQCPAQAPAGGSEETIAKAKQSRSE 1414
Query: 84 SRSPGRPPKSARRSASASHQADIKEARREVEVKLTPLILKPFGNSISRYNGEPEHIERND 143
++ K R + I++++ + V P + K + GE + + +
Sbjct: 1415 KKARKAMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIEDLSQ 1474
Query: 144 APHKNTQEKFSLSQESSYIATQYSLRPR-REEVKLKEIDSKEE 185
HK EKF + E S + + + RPR R E K +E + +EE
Sbjct: 1475 QVHKAAAEKFKVPSEPSALVPESAPRPRVRLECKEEEEEEEEE 1517
>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 38.1 bits (87), Expect = 0.024
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 5/163 (3%)
Query: 28 LSHDSTSQLYTVKYKDG---TELELKENDI-KPLTSFRQRKGGSTSSSPSRRRGSRSRSR 83
L DS L + ++ D + EL E DI P T + + S + + +SRS
Sbjct: 1315 LEEDSPRALGSGQHSDSHGESSAELDEQDILAPQTVQCPAQAPAGGSEETIAKAKQSRSE 1374
Query: 84 SRSPGRPPKSARRSASASHQADIKEARREVEVKLTPLILKPFGNSISRYNGEPEHIERND 143
++ K R + I++++ + V P + K + GE + + +
Sbjct: 1375 KKARKAMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIEDLSQ 1434
Query: 144 APHKNTQEKFSLSQESSYIATQYSLRPR-REEVKLKEIDSKEE 185
HK EKF + E S + + + RPR R E K +E + +EE
Sbjct: 1435 QVHKAAAEKFKVPSEPSALVPESAPRPRVRLECKEEEEEEEEE 1477
>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 38.1 bits (87), Expect = 0.024
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 5/163 (3%)
Query: 28 LSHDSTSQLYTVKYKDG---TELELKENDI-KPLTSFRQRKGGSTSSSPSRRRGSRSRSR 83
L DS L + ++ D + EL E DI P T + + S + + +SRS
Sbjct: 1315 LEEDSPRALGSGQHSDSHGESSAELDEQDILAPQTVQCPAQAPAGGSEETIAKAKQSRSE 1374
Query: 84 SRSPGRPPKSARRSASASHQADIKEARREVEVKLTPLILKPFGNSISRYNGEPEHIERND 143
++ K R + I++++ + V P + K + GE + + +
Sbjct: 1375 KKARKAMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIEDLSQ 1434
Query: 144 APHKNTQEKFSLSQESSYIATQYSLRPR-REEVKLKEIDSKEE 185
HK EKF + E S + + + RPR R E K +E + +EE
Sbjct: 1435 QVHKAAAEKFKVPSEPSALVPESAPRPRVRLECKEEEEEEEEE 1477
>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 38.1 bits (87), Expect = 0.024
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 5/163 (3%)
Query: 28 LSHDSTSQLYTVKYKDG---TELELKENDI-KPLTSFRQRKGGSTSSSPSRRRGSRSRSR 83
L DS L + ++ D + EL E DI P T + + S + + +SRS
Sbjct: 1355 LEEDSPRALGSGQHSDSHGESSAELDEQDILAPQTVQCPAQAPAGGSEETIAKAKQSRSE 1414
Query: 84 SRSPGRPPKSARRSASASHQADIKEARREVEVKLTPLILKPFGNSISRYNGEPEHIERND 143
++ K R + I++++ + V P + K + GE + + +
Sbjct: 1415 KKARKAMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIEDLSQ 1474
Query: 144 APHKNTQEKFSLSQESSYIATQYSLRPR-REEVKLKEIDSKEE 185
HK EKF + E S + + + RPR R E K +E + +EE
Sbjct: 1475 QVHKAAAEKFKVPSEPSALVPESAPRPRVRLECKEEEEEEEEE 1517
>gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 38.1 bits (87), Expect = 0.024
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 5/163 (3%)
Query: 28 LSHDSTSQLYTVKYKDG---TELELKENDI-KPLTSFRQRKGGSTSSSPSRRRGSRSRSR 83
L DS L + ++ D + EL E DI P T + + S + + +SRS
Sbjct: 1315 LEEDSPRALGSGQHSDSHGESSAELDEQDILAPQTVQCPAQAPAGGSEETIAKAKQSRSE 1374
Query: 84 SRSPGRPPKSARRSASASHQADIKEARREVEVKLTPLILKPFGNSISRYNGEPEHIERND 143
++ K R + I++++ + V P + K + GE + + +
Sbjct: 1375 KKARKAMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIEDLSQ 1434
Query: 144 APHKNTQEKFSLSQESSYIATQYSLRPR-REEVKLKEIDSKEE 185
HK EKF + E S + + + RPR R E K +E + +EE
Sbjct: 1435 QVHKAAAEKFKVPSEPSALVPESAPRPRVRLECKEEEEEEEEE 1477
>gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens]
Length = 344
Score = 37.7 bits (86), Expect = 0.031
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 43 DGTELE---LKENDIKPLTSFRQRKGGSTSSSPSRRRG-------SRSRSRSRSPGRPPK 92
DGTE+ ++ + KP TS R+ GS S S SRRR SRSRSRS S R
Sbjct: 167 DGTEINGRNIRLIEDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRS 226
Query: 93 SARRSASASHQADIKEARREVEVK 116
+R + ++ +++R + + K
Sbjct: 227 RSRSKGRSRSRSKGRKSRSKSKSK 250
Score = 31.6 bits (70), Expect = 2.2
Identities = 25/54 (46%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 63 RKGGSTSSS-PSRRRGSRSRSRSRSPGRPPKSARRSASAS----HQADIKEARR 111
RK S S S P RGS S SRSRS KS RS S S + DIK R
Sbjct: 241 RKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSR 294
Score = 30.0 bits (66), Expect = 6.5
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 39 VKYKDGTELELKENDIKPLTSFRQRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSA 98
+K K + + + N P+ + R + S P +R SRSRSRSRS KS RS
Sbjct: 289 IKSKSRSRSQSRSNSPLPVPPSKAR----SVSPPPKRATSRSRSRSRS-----KSRSRSR 339
Query: 99 SAS 101
S+S
Sbjct: 340 SSS 342
>gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens]
Length = 221
Score = 37.4 bits (85), Expect = 0.041
Identities = 36/115 (31%), Positives = 46/115 (40%), Gaps = 15/115 (13%)
Query: 43 DGTELELKENDI-KPLTSFRQRKG-----------GSTSSSPSRRRGSRSRSRSRSPGRP 90
DG EL ++ +P S R+G G S SP RRR SRSRSRSRS R
Sbjct: 81 DGRELRVQMARYGRPPDSHHSRRGPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRS 140
Query: 91 PKSARRSASASHQADIKEARREVEVKLTPLILKPFGNSISRYNGEPEHIERNDAP 145
RS S S + R + K +S+SR R+ +P
Sbjct: 141 RSRYSRSKSRSR---TRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSP 192
Score = 37.4 bits (85), Expect = 0.041
Identities = 24/39 (61%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 63 RKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASAS 101
R+ S SSS SR R SRSRSRSRS PP S R S S S
Sbjct: 167 RRSKSKSSSVSRSR-SRSRSRSRSRSPPPVSKRESKSRS 204
Score = 33.1 bits (74), Expect = 0.77
Identities = 22/80 (27%), Positives = 35/80 (43%)
Query: 13 RGRWPGSSLYYEVEILSHDSTSQLYTVKYKDGTELELKENDIKPLTSFRQRKGGSTSSSP 72
R R S Y + S + T K + + K + + S + + S S P
Sbjct: 135 RSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPP 194
Query: 73 SRRRGSRSRSRSRSPGRPPK 92
+R S+SRSRS+SP + P+
Sbjct: 195 VSKRESKSRSRSKSPPKSPE 214
>gi|62460633 RNA-binding motif protein 16 [Homo sapiens]
Length = 1271
Score = 37.4 bits (85), Expect = 0.041
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 13/83 (15%)
Query: 42 KDGTELELKENDIKPLT------------SFRQRKGGSTSSSPSRRRGSRSRSRSRSPGR 89
+DG E E+ E + K + S RK S S S SR+R R RSRSRS R
Sbjct: 379 QDGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRER 438
Query: 90 PPKSARRSASASHQADIKEARRE 112
KS+ RS S+ +A +E R+
Sbjct: 439 KRKSS-RSYSSERRAREREKERQ 460
>gi|226442889 jumonji domain containing 2C isoform 2 [Homo sapiens]
Length = 1047
Score = 37.0 bits (84), Expect = 0.054
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 7 ADGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKDGTELELKENDIKPL 57
A+GEVV+ +WP LY S + + +Y V+++DG+++ +K DI L
Sbjct: 938 AEGEVVQVKWPDGKLYGAKYFGS--NIAHMYQVEFEDGSQIAMKREDIYTL 986
>gi|109255247 jumonji domain containing 2C isoform 1 [Homo sapiens]
Length = 1056
Score = 37.0 bits (84), Expect = 0.054
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 7 ADGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKDGTELELKENDIKPL 57
A+GEVV+ +WP LY S + + +Y V+++DG+++ +K DI L
Sbjct: 938 AEGEVVQVKWPDGKLYGAKYFGS--NIAHMYQVEFEDGSQIAMKREDIYTL 986
>gi|45504380 jumonji domain containing 2B [Homo sapiens]
Length = 1096
Score = 37.0 bits (84), Expect = 0.054
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 7 ADGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKDGTELELKENDI 54
++GE+V RW +LY I S TS +Y V+++DG++L +K DI
Sbjct: 978 SEGELVELRWTDGNLYKAKFISS--VTSHIYQVEFEDGSQLTVKRGDI 1023
>gi|72534660 splicing factor, arginine/serine-rich 7 [Homo sapiens]
Length = 238
Score = 37.0 bits (84), Expect = 0.054
Identities = 26/44 (59%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 61 RQRKGGSTSSSPSRRRGSR-SRSRSRSPGRPPKSA--RRSASAS 101
R+R+ S S S SR RG R SRSRSRS GR +SA RRS S S
Sbjct: 124 RRRRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSIS 167
Score = 33.9 bits (76), Expect = 0.45
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 59 SFRQRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASAS 101
S R+ + GS S + SRSRSRSRS RP S +S S S
Sbjct: 175 SLRRSRSGSIKGSRYFQSPSRSRSRSRSISRPRSSRSKSRSPS 217
Score = 33.1 bits (74), Expect = 0.77
Identities = 22/36 (61%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 67 STSSSPSRRRGSRSRSRSRSPGR---PPKSARRSAS 99
S S S SR R SRS+SRS SP R P S RRSAS
Sbjct: 198 SRSRSISRPRSSRSKSRSPSPKRSRSPSGSPRRSAS 233
Score = 30.0 bits (66), Expect = 6.5
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 73 SRRRGSRSRSRSRSPGRPPKSAR-RSASASHQADIKEARREVEVKL 117
SRRR SRSRSRS S R + +R RS S ++ RR + L
Sbjct: 123 SRRRRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISL 168
>gi|88758580 cyclin L2 isoform A [Homo sapiens]
Length = 520
Score = 36.2 bits (82), Expect = 0.091
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Query: 61 RQRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQADIKEARREVEVKLTPL 120
++RK S S+S + SRSRSRS S PP+ A RSA ++I+ +R+ + K
Sbjct: 402 KRRKSDSGSTSGGSKSQSRSRSRSDS---PPRQAPRSAPYK-GSEIRGSRKSKDCKYPQK 457
Query: 121 ILKPFGNSISRYNGEPEHIERNDAPHKNTQEKFSLSQESSYIATQYSLRPRREE 174
K S SR ER D P K ++ + + Y RR E
Sbjct: 458 PHKSRSRSSSRSRSRSR--ERADNPGKYKKKSHYYRDQRRERSRSYERTGRRYE 509
>gi|134152708 arginine and glutamate rich 1 [Homo sapiens]
Length = 273
Score = 36.2 bits (82), Expect = 0.091
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 20/159 (12%)
Query: 68 TSSSPSRRRGSRSRSRSRSPGRPPKSA----------RRSASASHQADIKEARREVE--- 114
T SS ++ SRSRSRSR R K + R S S S + +RRE +
Sbjct: 15 TKSSKHNKKRSRSRSRSRDKERVRKRSKSRESKRNRRRESRSRSRSTNTAVSRRERDRER 74
Query: 115 VKLTPLILKPFGNSISRYNGEPEHIERNDAPHK---NTQEKFSLSQESSYIATQYSLRPR 171
P + FG ++S+ + E +R + K Q K + + + + R R
Sbjct: 75 ASSPPDRIDIFGRTVSKRSSLDEKQKREEEEKKAEFERQRKIRQQEIEEKLIEEETAR-R 133
Query: 172 REEVKLKEIDSKEEK---YVAKELAVRTFEVTPIRAKDL 207
EE+ K ++ + EK + +E+ R E I K L
Sbjct: 134 VEELVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEKQL 172
Score = 33.1 bits (74), Expect = 0.77
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 9/153 (5%)
Query: 65 GGSTSSSPSRRRGSRS------RSRSRSPGRPPKSARRSASASHQADIKEARREVEVKLT 118
G S S S SR + ++S RSRSRS R + R+ + + + + T
Sbjct: 2 GRSRSRSSSRSKHTKSSKHNKKRSRSRSRSRDKERVRKRSKSRESKRNRRRESRSRSRST 61
Query: 119 PLILKPFGNSISRYNGEPEHIE---RNDAPHKNTQEKFSLSQESSYIATQYSLRPRREEV 175
+ R + P+ I+ R + + EK +E + + R++E+
Sbjct: 62 NTAVSRRERDRERASSPPDRIDIFGRTVSKRSSLDEKQKREEEEKKAEFERQRKIRQQEI 121
Query: 176 KLKEIDSKEEKYVAKELAVRTFEVTPIRAKDLE 208
+ K I+ + + V + +A R E R ++E
Sbjct: 122 EEKLIEEETARRVEELVAKRVEEELEKRKDEIE 154
>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
Length = 484
Score = 34.7 bits (78), Expect = 0.27
Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 61 RQRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQADIKEARREVEVKLTPL 120
R R+ STS + +++ + + RS++P + +ARRS SAS +E RR T
Sbjct: 300 RGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSAS-----RERRRRRSRSGTRS 354
Query: 121 ILKPFGNSISRYNGEPEHIERNDAP--HKNTQEKFSLSQESSYIATQYSLRPRREEVKLK 178
KP + R+ +P HK ++K + S + + + ++ + K K
Sbjct: 355 PKKP--------RSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEK 406
Query: 179 EIDSKEE 185
+ + K E
Sbjct: 407 DRERKSE 413
Score = 32.3 bits (72), Expect = 1.3
Identities = 45/169 (26%), Positives = 64/169 (37%), Gaps = 32/169 (18%)
Query: 61 RQRKGGSTSSSPSRRRGSRSRS------------RSRSPGR----PPKSARRSASASHQA 104
R R + S SR R SRSRS RS+SP R + RRS S S
Sbjct: 252 RSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTR 311
Query: 105 DIKEARREVEVKLTPLILKPFGNSISRYNGEPEHIERND-----APHKNTQEKFSLSQES 159
D K+ +E + TP K + + + E R +P K K LS+
Sbjct: 312 DKKKEDKEKKRSKTP--PKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSP 369
Query: 160 SYIATQYSLRPRREEVKLKEIDSKEEKYVAKELAVRTFEVTPIRAKDLE 208
S PRR + + K+ KE +E + + + + KD E
Sbjct: 370 S---------PRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRE 409
>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
Length = 320
Score = 34.7 bits (78), Expect = 0.27
Identities = 23/46 (50%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 58 TSFRQRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQ 103
+S R+R S+SSSP R R RSRSRS S G K RS S Q
Sbjct: 267 SSPRKRSYSSSSSSPERNR-KRSRSRSSSSGDRKKRRTRSRSPESQ 311
Score = 33.5 bits (75), Expect = 0.59
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 58 TSFRQRKGGSTSSSPSRRRGSRSRSRSRS---PGRPPKSARRSASASHQADIKEAR 110
+S Q + S+S SR RGS+SRS SRS P K + S+S+S + + K +R
Sbjct: 234 SSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSR 289
Score = 31.6 bits (70), Expect = 2.2
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 42 KDGTELELKENDIKPLTSFRQRKGGSTSSSPSRRRGSRSRSRSRSP--GRPPKSARRSAS 99
+D +L D ++K S S SR SRS SRS SP R +R +S
Sbjct: 175 EDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSS 234
Query: 100 ASHQADIKEARRE 112
+S Q+ + + RE
Sbjct: 235 SSSQSRSRSSSRE 247
Score = 31.6 bits (70), Expect = 2.2
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 61 RQRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQADIKEARR 111
R R +SSS R S SR RSRS G S RS+S SH+ +R
Sbjct: 226 RSRSRSRSSSSSQSRSRSSSRERSRSRG----SKSRSSSRSHRGSSSPRKR 272
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 34.7 bits (78), Expect = 0.27
Identities = 24/52 (46%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 63 RKGGSTSSSPSR---RRGSRSRSRSRSPGRPPKSARRSASASHQADIKEARR 111
+ GS S S SR R SRSRSRSRS R +S RS S S RR
Sbjct: 759 KSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRR 810
Score = 33.1 bits (74), Expect = 0.77
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 59 SFRQRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASAS 101
S+ + + S S S S R SRS+SRSRS P RRS S S
Sbjct: 775 SYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRS 817
Score = 32.7 bits (73), Expect = 1.0
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 61 RQRKGGSTSSSPSRRRG-SRSRSRSRSPGRPPKSARRSASASHQADI 106
R R + SS SR R SRSRS+S SPGR +S RS + A +
Sbjct: 780 RSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGL 826
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 34.7 bits (78), Expect = 0.27
Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 16/123 (13%)
Query: 63 RKGGSTSSSPSRRRGSRS--------RSRSRSPGRPPKSARRSASASHQADIKEARREVE 114
R+G S S +P+RR SRS RSRSR+P R +S R+ RR
Sbjct: 654 RRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRS 713
Query: 115 VKLTPLILKPFGNSISRYNGEPEHIER---NDAPHK-----NTQEKFSLSQESSYIATQY 166
TP G+S R N R N +P +++ SLS S ++
Sbjct: 714 HSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRL 773
Query: 167 SLR 169
SLR
Sbjct: 774 SLR 776
Score = 33.1 bits (74), Expect = 0.77
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 63 RKGGSTSSSPSRRRG-----SRSRSRSRSPGRPPKSARRSASASHQADIKEARR 111
R+G S S +P+RRR +R RSRSR+P R +S R+ + RR
Sbjct: 580 RRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRR 633
Score = 33.1 bits (74), Expect = 0.77
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 29/85 (34%)
Query: 55 KPLTSFRQRKGGSTSSSPSRRRGSRSRSR------------SRSPGR------------- 89
K T+ R+ + GS+ S+ RR+ SRSRSR SRSP R
Sbjct: 1781 KTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRG 1840
Query: 90 ----PPKSARRSASASHQADIKEAR 110
PP S +RS S + A K +R
Sbjct: 1841 RSRTPPTSRKRSRSRTSPAPWKRSR 1865
Score = 31.2 bits (69), Expect = 2.9
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 63 RKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASASHQADIKEAR 110
R+G S S +P+RRR SR+RS R R ARRS + + + R
Sbjct: 611 RRGRSRSRTPARRR-SRTRSPVRRRSRSRSPARRSGRSRSRTPARRGR 657
Score = 30.8 bits (68), Expect = 3.8
Identities = 18/38 (47%), Positives = 20/38 (52%)
Query: 62 QRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSAS 99
QR G S S + RR SRS R RS R P + RS S
Sbjct: 538 QRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRS 575
Score = 30.8 bits (68), Expect = 3.8
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 62 QRKGGSTSSSPSRRRGSRSRS---RSRSPGRPPKSARRSASASHQADIKEAR 110
+R G S S +P+RR SRSR+ R RS R P ARRS + + + R
Sbjct: 642 RRSGRSRSRTPARRGRSRSRTPARRGRSRSRTP--ARRSGRSRSRTPARRGR 691
Score = 30.8 bits (68), Expect = 3.8
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 58 TSFRQRKGGSTSSSPSRRRGSRSRS----RSRSPGRPPKSARRSASASHQADIKEAR 110
TS +R+ S +S SRRR SRSR+ R RS R P + RRS S + + +R
Sbjct: 1904 TSVTRRRSRSRASPVSRRR-SRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSR 1959
Score = 30.4 bits (67), Expect = 5.0
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 62 QRKGGSTSS----SPSRRRGSRSRSRSRSPGRPPKSARRSASASHQADIKEARR 111
QR+G S S+ S SR +R RSRSR+P R +S R+ + RR
Sbjct: 549 QRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRR 602
Score = 30.4 bits (67), Expect = 5.0
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 25/99 (25%)
Query: 31 DSTSQLYTVKYKDGTELELKENDIKPLTSFRQRKGGSTSSSPS--------RRRGSRSRS 82
DS S+L + + G+ E+K+ KP + R + G +S P RR S S S
Sbjct: 1586 DSKSRLSPRRSRSGSSPEVKD---KPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSS 1642
Query: 83 RSR------------SPGRPPKS--ARRSASASHQADIK 107
+ R SP PPKS ARR + +S + K
Sbjct: 1643 KGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTK 1681
Score = 29.6 bits (65), Expect = 8.5
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 62 QRKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASAS 101
+R G S S +P+RR SRSR+ R R RR S S
Sbjct: 676 RRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHS 715
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 34.3 bits (77), Expect = 0.35
Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 19/146 (13%)
Query: 50 KENDIKPLTSFRQRKGGSTSSSPSRRRGSRSRSRS------RSPGRPPKSAR---RSASA 100
KE D + +S R+ G S S SP+++R SRSRS RS R P AR RS S
Sbjct: 373 KERDHRGSSSPRKESGRSQSGSPNKQR-DHSRSRSPNKARDRSRSRSPYKARDRSRSRSP 431
Query: 101 SHQADIKEARREVEVKLTPLILKPFGNSISRYNGEPEHIERNDAPHKNTQEKFSLSQESS 160
+ D +R + + S SR + R+ +P+K S S
Sbjct: 432 NKARDCSRSRSPYKAR---------DRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKE 482
Query: 161 YIATQYSLRPRREEVKLKEIDSKEEK 186
+Q + + + SKE +
Sbjct: 483 RDHSQLGSPSKERDHRRSRSPSKERQ 508
Score = 33.5 bits (75), Expect = 0.59
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 45 TELELKENDIKPLTSFRQRKGGSTSSSPSRRRGSRS--RSRSRSPGRPPKSARRSASASH 102
T+ N + +S + K ST +PS R SRS RS++R+P R R S AS
Sbjct: 47 TKPATSRNSVMSPSSSKSTKSTSTKRAPSNRPSSRSRVRSKARTPSRVSTDTRTS-KASK 105
Query: 103 QADIK 107
+D++
Sbjct: 106 ASDVR 110
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 34.3 bits (77), Expect = 0.35
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 42 KDGTELELKENDIKPLTSFRQ-RKGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASA 100
KD + E KE+ + R R+ S S SP RR R R RS R P+ +S S
Sbjct: 151 KDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
Query: 101 SHQADIKEARRE-----VEVKLTPLILKPFGNSISRYNGEPEHI--ERNDAPHKNTQEK 152
S + KE E V+VK P + + S +PE I + +P KN++++
Sbjct: 211 SPAPEKKEKTPELPEPSVKVK-EPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKE 268
Score = 31.6 bits (70), Expect = 2.2
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 61 RQRKGGSTSSSPSRRRGSRSRS----RSRSPGRPPKSARRSAS 99
R+R S S+SPS R+ + S R RSP PP RRS S
Sbjct: 520 RRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPS 562
Score = 30.8 bits (68), Expect = 3.8
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 48 ELKENDIKPLTSFRQRKGGSTSS-SPSR---RRGSRSRSRSRSPGRPPKSARR 96
E ++ +P + R + T S SPS RR RSRSRS SP R P RR
Sbjct: 268 EKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRR 320
Score = 30.0 bits (66), Expect = 6.5
Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
Query: 59 SFRQRKGGSTSSSPSRRRGSRSRSRSRSPG--RPPKSAR-RSASASHQADIKEARREVEV 115
S ++++ T R SRSR+RSRSP RP + R RS S S + RR
Sbjct: 265 SKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPR 324
Query: 116 KLTPLILKPFGNSISRYNGEPEHIERNDAPHKNTQEKFSLSQESSYIATQYSLRPRREEV 175
+ TP R P H + + SLS SS ++ S P ++
Sbjct: 325 RRTP---------PRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPP 375
Query: 176 K 176
K
Sbjct: 376 K 376
Score = 29.6 bits (65), Expect = 8.5
Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 18/130 (13%)
Query: 61 RQRKGGSTSSSPSRRRGSRSRSRSRSPGR----PPKSARR-SASAS----HQADIKEARR 111
R+R S S S S SRSRS + P + PP+ RR S SAS A
Sbjct: 348 RRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATP 407
Query: 112 EVEVKLTPLILKPFGNSISRYNGEPEHIERNDAPHKNTQEKFSLSQESSYIATQYSLRPR 171
+ + +P + SR + P HK T+++ S S + +PR
Sbjct: 408 PPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSP---------APKPR 458
Query: 172 REEVKLKEID 181
+ E+ E D
Sbjct: 459 KVELSESEED 468
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 33.9 bits (76), Expect = 0.45
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 18/113 (15%)
Query: 64 KGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASAS--HQADIKEARRE--------- 112
+G S S SRR+GS S S P S RRS SAS H +E R+
Sbjct: 3847 QGESAGSRRSRRQGSSVSQDSDSEAYPEDSERRSESASRNHHGSSREQSRDGSRHPGSSH 3906
Query: 113 ----VEVKLTPLILKPFGNSISRYNGEPEHIERNDAPHKNTQEKFSLSQESSY 161
V+ +P+ +S ++ +G + ++ A H Q + S SSY
Sbjct: 3907 RDTASHVQSSPV---QSDSSTAKEHGHFSSLSQDSAYHSGIQSRGSPHSSSSY 3956
Score = 29.6 bits (65), Expect = 8.5
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 64 KGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASAS--HQADIKEARR 111
+G S S SRR+GS S G S RRS SAS H +E R
Sbjct: 1578 QGESAGSKTSRRQGSSVSQDRDSEGHSEDSERRSESASRNHYGSAREQSR 1627
Score = 29.6 bits (65), Expect = 8.5
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 64 KGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASAS--HQADIKEARRE 112
+G S+ SR RGS S S G S RRS SAS H +E R+
Sbjct: 2227 QGQSSGPRTSRPRGSSVSQDSDSEGHSEDSERRSGSASRNHHGSAQEQSRD 2277
Score = 29.6 bits (65), Expect = 8.5
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 64 KGGSTSSSPSRRRGSRSRSRSRSPGRPPKSARRSASAS--HQADIKEARR 111
+G S S SRR+GS S S G S R S SAS H+ ++E R
Sbjct: 3199 QGQSEGSRRSRRQGSSVSQDSDSEGHSEDSERWSGSASRNHRGSVQEQSR 3248
>gi|239756568 PREDICTED: similar to BCL2-associated transcription
factor 1 [Homo sapiens]
Length = 869
Score = 33.9 bits (76), Expect = 0.45
Identities = 22/41 (53%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 63 RKGGSTSSSPSRRRGS--RSRSRSRSPGRPPKSARRSASAS 101
R+G S S SP RR S RSRSRSR R +S R S+S S
Sbjct: 104 RRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRS 144
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.140 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,692,874
Number of Sequences: 37866
Number of extensions: 1079033
Number of successful extensions: 6734
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 5575
Number of HSP's gapped (non-prelim): 920
length of query: 615
length of database: 18,247,518
effective HSP length: 108
effective length of query: 507
effective length of database: 14,157,990
effective search space: 7178100930
effective search space used: 7178100930
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.