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Search of human proteins with 37577124
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|37577124 ubiquitin conjugating enzyme E2, J2 isoform 2 [Homo
sapiens]
(259 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|37577124 ubiquitin conjugating enzyme E2, J2 isoform 2 [Homo ... 532 e-151
gi|37577126 ubiquitin conjugating enzyme E2, J2 isoform 1 [Homo ... 521 e-148
gi|37577132 ubiquitin conjugating enzyme E2, J2 isoform 3 [Homo ... 425 e-119
gi|37577130 ubiquitin conjugating enzyme E2, J2 isoform 3 [Homo ... 425 e-119
gi|37577122 ubiquitin-conjugating enzyme E2, J1 [Homo sapiens] 133 1e-31
gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo sa... 78 9e-15
gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens] 77 1e-14
gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens] 77 2e-14
gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens] 77 2e-14
gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens] 77 2e-14
gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo sap... 77 2e-14
gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo s... 70 2e-12
gi|150417999 ubiquitin-conjugating enzyme E2Z [Homo sapiens] 69 4e-12
gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo s... 68 9e-12
gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 68 9e-12
gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 68 9e-12
gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 68 9e-12
gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 68 9e-12
gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 68 9e-12
gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 68 9e-12
gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo sa... 68 9e-12
gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens] 67 1e-11
gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo sa... 67 2e-11
gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens] 66 3e-11
gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo s... 66 3e-11
gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo s... 65 6e-11
gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens] 60 2e-09
gi|29893557 ubiquitin-conjugating enzyme E2G 2 isoform 1 [Homo s... 59 3e-09
gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo s... 57 2e-08
gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens] 56 3e-08
>gi|37577124 ubiquitin conjugating enzyme E2, J2 isoform 2 [Homo
sapiens]
Length = 259
Score = 532 bits (1370), Expect = e-151
Identities = 259/259 (100%), Positives = 259/259 (100%)
Query: 1 MSSTSSKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGY 60
MSSTSSKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGY
Sbjct: 1 MSSTSSKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGY 60
Query: 61 YHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLS 120
YHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLS
Sbjct: 61 YHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLS 120
Query: 121 FMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQKAQDELSSR 180
FMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQKAQDELSSR
Sbjct: 121 FMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQKAQDELSSR 180
Query: 181 PQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGALANLFVIV 240
PQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGALANLFVIV
Sbjct: 181 PQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGALANLFVIV 240
Query: 241 GFAAFAYTVKYVLRSIAQE 259
GFAAFAYTVKYVLRSIAQE
Sbjct: 241 GFAAFAYTVKYVLRSIAQE 259
>gi|37577126 ubiquitin conjugating enzyme E2, J2 isoform 1 [Homo
sapiens]
Length = 275
Score = 521 bits (1343), Expect = e-148
Identities = 259/275 (94%), Positives = 259/275 (94%), Gaps = 16/275 (5%)
Query: 1 MSSTSSKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEW---------------- 44
MSSTSSKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEW
Sbjct: 1 MSSTSSKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWFKRFSWLSLLSSWDYR 60
Query: 45 HYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDT 104
HYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDT
Sbjct: 61 HYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDT 120
Query: 105 WNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVV 164
WNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVV
Sbjct: 121 WNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVV 180
Query: 165 EEIKQKQKAQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANR 224
EEIKQKQKAQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANR
Sbjct: 181 EEIKQKQKAQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANR 240
Query: 225 HHGLLGGALANLFVIVGFAAFAYTVKYVLRSIAQE 259
HHGLLGGALANLFVIVGFAAFAYTVKYVLRSIAQE
Sbjct: 241 HHGLLGGALANLFVIVGFAAFAYTVKYVLRSIAQE 275
>gi|37577132 ubiquitin conjugating enzyme E2, J2 isoform 3 [Homo
sapiens]
Length = 207
Score = 425 bits (1093), Expect = e-119
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 53 MTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVS 112
MTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVS
Sbjct: 1 MTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVS 60
Query: 113 TILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQK 172
TILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQK
Sbjct: 61 TILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQK 120
Query: 173 AQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGA 232
AQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGA
Sbjct: 121 AQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGA 180
Query: 233 LANLFVIVGFAAFAYTVKYVLRSIAQE 259
LANLFVIVGFAAFAYTVKYVLRSIAQE
Sbjct: 181 LANLFVIVGFAAFAYTVKYVLRSIAQE 207
>gi|37577130 ubiquitin conjugating enzyme E2, J2 isoform 3 [Homo
sapiens]
Length = 207
Score = 425 bits (1093), Expect = e-119
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 53 MTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVS 112
MTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVS
Sbjct: 1 MTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVS 60
Query: 113 TILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQK 172
TILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQK
Sbjct: 61 TILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQK 120
Query: 173 AQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGA 232
AQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGA
Sbjct: 121 AQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGA 180
Query: 233 LANLFVIVGFAAFAYTVKYVLRSIAQE 259
LANLFVIVGFAAFAYTVKYVLRSIAQE
Sbjct: 181 LANLFVIVGFAAFAYTVKYVLRSIAQE 207
>gi|37577122 ubiquitin-conjugating enzyme E2, J1 [Homo sapiens]
Length = 318
Score = 133 bits (335), Expect = 1e-31
Identities = 59/138 (42%), Positives = 91/138 (65%), Gaps = 2/138 (1%)
Query: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
A +RL ++ +K DP + A+PL N+ EWH+ VRGP + ++GG YHG+++ P E+P
Sbjct: 11 AVKRLMKEAAELK-DPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYP 69
Query: 73 FKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP-TLGS 131
KPPSI ++T NGRF+ ++CLSI+ HP+TW P+WS+ T L ++ FM KG +GS
Sbjct: 70 MKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGS 129
Query: 132 IETSDFTKRQLAVQSLAF 149
++ + +R LA +S F
Sbjct: 130 LDYTPEERRALAKKSQDF 147
>gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo
sapiens]
Length = 193
Score = 77.8 bits (190), Expect = 9e-15
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 1 MSSTSSKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGY 60
+S + + + +T+ +R++++ I DP P A P NI EW + GP + YEGG
Sbjct: 36 VSMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGV 95
Query: 61 YHGKLIFPREFPFKPPSIYMITPNGRFKCNTR--LCLSITDFHPDTWNPAWSVSTILTGL 118
+ + F E+PFKPP + T N++ +CL D D W+PA ++S +L +
Sbjct: 96 FFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISKVLLSI 152
Query: 119 LSFMVE---KGPTLGSIETSDFTKR 140
S + + P +GSI T T R
Sbjct: 153 CSLLTDCNPADPLVGSIATQYMTNR 177
>gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]
Length = 152
Score = 77.0 bits (188), Expect = 1e-14
Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
Query: 11 TTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPRE 70
T A +RL +D+ R+++DP + P +NI++W+ V+ GPE TP+E G + + F E
Sbjct: 3 TPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEE 62
Query: 71 FPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
+P KPP++ ++ + + +CL I + W+P + VS+ILT + S + E P
Sbjct: 63 YPNKPPTVRFLSKMFHPNVYADGSICLDILQ---NRWSPTYDVSSILTSIQSLLDEPNP 118
>gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens]
Length = 201
Score = 76.6 bits (187), Expect = 2e-14
Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Query: 5 SSKRAP--TTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYH 62
SSK A +T+ +R++++ I DP P A P NI EW + GP + YEGG +
Sbjct: 46 SSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFF 105
Query: 63 GKLIFPREFPFKPPSIYMITPNGRFKCNTR--LCLSITDFHPDTWNPAWSVSTILTGLLS 120
+ F ++PFKPP + T N++ +CL D D W+PA ++S +L + S
Sbjct: 106 LDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISKVLLSICS 162
Query: 121 FMVE---KGPTLGSIETSDFTKR 140
+ + P +GSI T T R
Sbjct: 163 LLTDCNPADPLVGSIATQYMTNR 185
>gi|33359694 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
Length = 207
Score = 76.6 bits (187), Expect = 2e-14
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 10/144 (6%)
Query: 2 SSTSSKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYY 61
S T++K + T+ +R++++ I DP P A P NI EW + GP + YEGG +
Sbjct: 53 SKTTAKLS--TSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVF 110
Query: 62 HGKLIFPREFPFKPPSIYMITPNGRFKCNTR--LCLSITDFHPDTWNPAWSVSTILTGLL 119
+ F ++PFKPP + T N++ +CL D D W+PA ++S +L +
Sbjct: 111 FLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISKVLLSIC 167
Query: 120 SFMVE---KGPTLGSIETSDFTKR 140
S + + P +GSI T T R
Sbjct: 168 SLLTDCNPADPLVGSIATQYLTNR 191
>gi|5454146 ubiquitin-conjugating enzyme E2E 3 [Homo sapiens]
Length = 207
Score = 76.6 bits (187), Expect = 2e-14
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 10/144 (6%)
Query: 2 SSTSSKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYY 61
S T++K + T+ +R++++ I DP P A P NI EW + GP + YEGG +
Sbjct: 53 SKTTAKLS--TSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVF 110
Query: 62 HGKLIFPREFPFKPPSIYMITPNGRFKCNTR--LCLSITDFHPDTWNPAWSVSTILTGLL 119
+ F ++PFKPP + T N++ +CL D D W+PA ++S +L +
Sbjct: 111 FLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISKVLLSIC 167
Query: 120 SFMVE---KGPTLGSIETSDFTKR 140
S + + P +GSI T T R
Sbjct: 168 SLLTDCNPADPLVGSIATQYLTNR 191
>gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo
sapiens]
Length = 152
Score = 76.6 bits (187), Expect = 2e-14
Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 11 TTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPRE 70
T A +RL +D+ R+++DP + P +NI+ W+ V+ GPE TP+E G + + F E
Sbjct: 3 TPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEE 62
Query: 71 FPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
+P KPP++ ++ + + +CL I + W+P + VS+ILT + S + E P
Sbjct: 63 YPNKPPTVRFVSKMFHPNVYADGSICLDILQ---NRWSPTYDVSSILTSIQSLLDEPNP 118
>gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo
sapiens]
Length = 147
Score = 70.1 bits (170), Expect = 2e-12
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
A +R++++ +++DP A P+ ++ W + GP +PY+GG + + FP ++P
Sbjct: 2 ALKRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 73 FKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
FKPP + T + N +CL D W+PA +VS +L + S + + P
Sbjct: 62 FKPPKVAFTTKIYHPNINSNGSICL---DILRSQWSPALTVSKVLLSICSLLCDPNP 115
>gi|150417999 ubiquitin-conjugating enzyme E2Z [Homo sapiens]
Length = 354
Score = 68.9 bits (167), Expect = 4e-12
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 2 SSTSSKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYY 61
S +R R+K+D + I K+P P + P ++ + H ++ GP TPYEGG++
Sbjct: 89 SDWDGERTAPQCLLRIKRDIMSIYKEPPPGMFVVPDTVDMTKIHALITGPFDTPYEGGFF 148
Query: 62 HGKLIFPREFPFKPPSIYMITP-------NGRFKCNTRLCLSIT-DFHPDTWNPAWSVST 113
P ++P PP + ++T N F N ++CLSI + W+PA S+S+
Sbjct: 149 LFVFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISS 208
Query: 114 ILTGLLSFMVE 124
+L + S M E
Sbjct: 209 VLISIQSLMTE 219
>gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo
sapiens]
Length = 148
Score = 67.8 bits (164), Expect = 9e-12
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
A +R+ ++ + +DP A P+ ++ W + GP +PY+GG + + FP ++P
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 73 FKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
FKPP + T PN N +CL D W+PA ++S +L + S + + P
Sbjct: 62 FKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPALTISKVLLSICSLLCDPNP 115
>gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 67.8 bits (164), Expect = 9e-12
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
A +R+ ++ + +DP A P+ ++ W + GP +PY+GG + + FP ++P
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 73 FKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
FKPP + T PN N +CL D W+PA ++S +L + S + + P
Sbjct: 62 FKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPALTISKVLLSICSLLCDPNP 115
>gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 67.8 bits (164), Expect = 9e-12
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
A +R+ ++ + +DP A P+ ++ W + GP +PY+GG + + FP ++P
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 73 FKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
FKPP + T PN N +CL D W+PA ++S +L + S + + P
Sbjct: 62 FKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPALTISKVLLSICSLLCDPNP 115
>gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 67.8 bits (164), Expect = 9e-12
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
A +R+ ++ + +DP A P+ ++ W + GP +PY+GG + + FP ++P
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 73 FKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
FKPP + T PN N +CL D W+PA ++S +L + S + + P
Sbjct: 62 FKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPALTISKVLLSICSLLCDPNP 115
>gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 67.8 bits (164), Expect = 9e-12
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
A +R+ ++ + +DP A P+ ++ W + GP +PY+GG + + FP ++P
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 73 FKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
FKPP + T PN N +CL D W+PA ++S +L + S + + P
Sbjct: 62 FKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPALTISKVLLSICSLLCDPNP 115
>gi|33149312 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 67.8 bits (164), Expect = 9e-12
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
A +R+ ++ + +DP A P+ ++ W + GP +PY+GG + + FP ++P
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 73 FKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
FKPP + T PN N +CL D W+PA ++S +L + S + + P
Sbjct: 62 FKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPALTISKVLLSICSLLCDPNP 115
>gi|33149310 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 67.8 bits (164), Expect = 9e-12
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
A +R+ ++ + +DP A P+ ++ W + GP +PY+GG + + FP ++P
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 73 FKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
FKPP + T PN N +CL D W+PA ++S +L + S + + P
Sbjct: 62 FKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPALTISKVLLSICSLLCDPNP 115
>gi|4507777 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 67.8 bits (164), Expect = 9e-12
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
A +R+ ++ + +DP A P+ ++ W + GP +PY+GG + + FP ++P
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 73 FKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
FKPP + T PN N +CL D W+PA ++S +L + S + + P
Sbjct: 62 FKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPALTISKVLLSICSLLCDPNP 115
>gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]
Length = 147
Score = 67.4 bits (163), Expect = 1e-11
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
A +R++++ +++DP + A P+ ++ W + GP + Y+GG + + FP ++P
Sbjct: 2 ALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 61
Query: 73 FKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
FKPP I T + N +CL D W+PA +VS +L + S + + P
Sbjct: 62 FKPPKIAFTTKIYHPNINSNGSICL---DILRSQWSPALTVSKVLLSICSLLCDPNP 115
>gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo
sapiens]
Length = 147
Score = 67.0 bits (162), Expect = 2e-11
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 13 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFP 72
A +R+ ++ + +DP A P+ ++ W + GP +PY+GG + + FP ++P
Sbjct: 2 ALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYP 61
Query: 73 FKPPSIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
FKPP + T PN N +CL D W+PA ++S +L + S + + P
Sbjct: 62 FKPPKVAFTTRIYHPN--INSNGSICL---DILRSQWSPALTISKVLLSICSLLCDPNP 115
>gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens]
Length = 152
Score = 65.9 bits (159), Expect = 3e-11
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 15 QRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFK 74
+R+ ++ R+ +PVP I AEP SN +H V+ GP+ +P+EGG + +L P E+P
Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMA 65
Query: 75 PPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
P + +T + R+CL D D W+PA + T+L + + + P
Sbjct: 66 APKVRFMTKIYHPNVDKLGRICL---DILKDKWSPALQIRTVLLSIQALLSAPNP 117
>gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo
sapiens]
Length = 176
Score = 65.9 bits (159), Expect = 3e-11
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 12/148 (8%)
Query: 2 SSTSSKRAPTTATQRLKQDYLRIKKDP----VPYICAEPLPSNILEWHYVVRGPEMTPYE 57
SS++ + T T + K+ + + K+ A P NI EW + GP + YE
Sbjct: 16 SSSNQQTEKETNTPKKKESKVSMSKNSKLLSTSAKSAGPKGDNIYEWRSTILGPPGSVYE 75
Query: 58 GGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTR--LCLSITDFHPDTWNPAWSVSTIL 115
GG + + F E+PFKPP + T N++ +CL D D W+PA ++S +L
Sbjct: 76 GGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISKVL 132
Query: 116 TGLLSFMVE---KGPTLGSIETSDFTKR 140
+ S + + P +GSI T T R
Sbjct: 133 LSICSLLTDCNPADPLVGSIATQYMTNR 160
>gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo
sapiens]
Length = 149
Score = 65.1 bits (157), Expect = 6e-11
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 17 LKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPP 76
L ++ + +DP A P+ ++ W + GP +PY+GG + + FP ++PFKPP
Sbjct: 8 LSKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPP 67
Query: 77 SIYMIT----PNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
+ T PN N +CL D W+PA ++S +L + S + + P
Sbjct: 68 KVAFTTRIYHPN--INSNGSICL---DILRSQWSPALTISKVLLSICSLLCDPNP 117
>gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens]
Length = 197
Score = 60.1 bits (144), Expect = 2e-09
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 16 RLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKP 75
RLK++ + +P P I + + + G TPYE G + ++I P +PF+P
Sbjct: 6 RLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEP 65
Query: 76 PSIYMITP--NGRFKCNTRLCLSITDFHP-DTWNPAWSVSTILTGLLSFMVEKGP--TLG 130
P I +TP + R+CL + P W P+ +++T+LT + M E P L
Sbjct: 66 PQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLM 125
Query: 131 SIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQKAQDE 176
+ +S+F + A A +K +QKQKA +E
Sbjct: 126 ADISSEFKYNKPAFLKNARQWTEK-----------HARQKQKADEE 160
>gi|29893557 ubiquitin-conjugating enzyme E2G 2 isoform 1 [Homo
sapiens]
Length = 165
Score = 59.3 bits (142), Expect = 3e-09
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 17/135 (12%)
Query: 12 TATQRLKQDYLRIKKDPVPYICAEPL-PSNILEWHYVVRGPEMTPYEGGYYHGKLIFPRE 70
TA +RL +Y ++ +P I A P+ N EW ++ GPE T +E G + L FP +
Sbjct: 4 TALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLD 63
Query: 71 FPFKPPSI----YMITPNGRFKCNTRLCLSIT----------DFHPDTWNPAWSVSTILT 116
+P PP + M PN + R+C+SI + + W+P SV IL
Sbjct: 64 YPLSPPKMRFTCEMFHPN--IYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILL 121
Query: 117 GLLSFMVEKGPTLGS 131
++S + E G+
Sbjct: 122 SVVSMLAEPNDESGA 136
>gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo
sapiens]
Length = 118
Score = 57.0 bits (136), Expect = 2e-08
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 41 ILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMIT----PNGRFKCNTRLCLS 96
+ W + GP +PY+GG + + FP ++PFKPP + T PN N +CL
Sbjct: 1 MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN--INSNGSICL- 57
Query: 97 ITDFHPDTWNPAWSVSTILTGLLSFMVEKGP 127
D W+PA ++S +L + S + + P
Sbjct: 58 --DILRSQWSPALTISKVLLSICSLLCDPNP 86
>gi|22212943 ubiquitin-conjugating enzyme UBC3B [Homo sapiens]
Length = 238
Score = 56.2 bits (134), Expect = 3e-08
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 39 SNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLS 96
S++ W + GP T YEGGY+ + FP ++P+ PP+ +T + N +C+S
Sbjct: 36 SDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCIS 95
Query: 97 ITDFHP------------DTWNPAWSVSTILTGLLSFMVE 124
I HP + WNP +V TIL ++S + E
Sbjct: 96 I--LHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNE 133
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,789,521
Number of Sequences: 37866
Number of extensions: 527760
Number of successful extensions: 1366
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1283
Number of HSP's gapped (non-prelim): 83
length of query: 259
length of database: 18,247,518
effective HSP length: 100
effective length of query: 159
effective length of database: 14,460,918
effective search space: 2299285962
effective search space used: 2299285962
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.