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Search of human proteins with 34878716
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|34878716 paired box protein 2 isoform d [Homo sapiens]
(408 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|34878716 paired box protein 2 isoform d [Homo sapiens] 838 0.0
gi|34878703 paired box protein 2 isoform e [Homo sapiens] 825 0.0
gi|34878701 paired box protein 2 isoform b [Homo sapiens] 758 0.0
gi|34878699 paired box protein 2 isoform a [Homo sapiens] 745 0.0
gi|34878709 paired box protein 2 isoform c [Homo sapiens] 693 0.0
gi|9951920 paired box 5 [Homo sapiens] 511 e-145
gi|7524361 paired box 8 isoform PAX8B [Homo sapiens] 474 e-134
gi|5803117 paired box 8 isoform PAX8A [Homo sapiens] 420 e-117
gi|7524363 paired box 8 isoform PAX8C [Homo sapiens] 384 e-107
gi|7524365 paired box 8 isoform PAX8D [Homo sapiens] 355 3e-98
gi|7669542 paired box 8 isoform PAX8E [Homo sapiens] 353 1e-97
gi|189083681 paired box gene 6 isoform a [Homo sapiens] 235 5e-62
gi|4505615 paired box gene 6 isoform a [Homo sapiens] 235 5e-62
gi|4580424 paired box gene 6 isoform b [Homo sapiens] 226 4e-59
gi|188219638 paired box 3 isoform PAX3i [Homo sapiens] 224 1e-58
gi|31563348 paired box 3 isoform PAX3g [Homo sapiens] 219 3e-57
gi|31563346 paired box 3 isoform PAX3h [Homo sapiens] 219 3e-57
gi|31563344 paired box 3 isoform PAX3e [Homo sapiens] 219 3e-57
gi|31563342 paired box 3 isoform PAX3d [Homo sapiens] 219 3e-57
gi|31563340 paired box 3 isoform PAX3 [Homo sapiens] 219 3e-57
gi|7524359 paired box 7 isoform 2 [Homo sapiens] 218 6e-57
gi|4505619 paired box 7 isoform 1 [Homo sapiens] 213 2e-55
gi|207029223 paired box 7 isoform 3 [Homo sapiens] 213 2e-55
gi|197276661 paired box 1 [Homo sapiens] 203 3e-52
gi|7242167 paired box 9 [Homo sapiens] 199 3e-51
gi|7524356 paired box 3 isoform PAX3b [Homo sapiens] 194 1e-49
gi|6654638 paired box 3 isoform PAX3a [Homo sapiens] 194 1e-49
gi|170784824 paired box 4 [Homo sapiens] 169 3e-42
gi|126116581 retina and anterior neural fold homeobox [Homo sapi... 44 3e-04
gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo s... 43 4e-04
>gi|34878716 paired box protein 2 isoform d [Homo sapiens]
Length = 408
Score = 838 bits (2166), Expect = 0.0
Identities = 408/408 (100%), Positives = 408/408 (100%)
Query: 1 MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV 60
MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
Sbjct: 1 MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV 60
Query: 61 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA 120
SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA
Sbjct: 61 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA 120
Query: 121 EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASND 180
EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASND
Sbjct: 121 EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASND 180
Query: 181 PVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEA 240
PVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEA
Sbjct: 181 PVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEA 240
Query: 241 LDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQ 300
LDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQ
Sbjct: 241 LDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQ 300
Query: 301 TYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNEA 360
TYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNEA
Sbjct: 301 TYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNEA 360
Query: 361 WRFSNPALLMPPPGPPLPLLPLPMTATSYRGDHIKLQADSFGLHIVPV 408
WRFSNPALLMPPPGPPLPLLPLPMTATSYRGDHIKLQADSFGLHIVPV
Sbjct: 361 WRFSNPALLMPPPGPPLPLLPLPMTATSYRGDHIKLQADSFGLHIVPV 408
>gi|34878703 paired box protein 2 isoform e [Homo sapiens]
Length = 431
Score = 825 bits (2132), Expect = 0.0
Identities = 408/431 (94%), Positives = 408/431 (94%), Gaps = 23/431 (5%)
Query: 1 MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV 60
MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
Sbjct: 1 MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV 60
Query: 61 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA 120
SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA
Sbjct: 61 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA 120
Query: 121 EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASND 180
EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASND
Sbjct: 121 EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASND 180
Query: 181 PVGSYSINGILGIPRSNGEKRKRDE-----------------------DVSEGSVPNGDS 217
PVGSYSINGILGIPRSNGEKRKRDE DVSEGSVPNGDS
Sbjct: 181 PVGSYSINGILGIPRSNGEKRKRDEVEVYTDPAHIRGGGGLHLVWTLRDVSEGSVPNGDS 240
Query: 218 QSGVDSLRKHLRADTFTQQQLEALDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGL 277
QSGVDSLRKHLRADTFTQQQLEALDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGL
Sbjct: 241 QSGVDSLRKHLRADTFTQQQLEALDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGL 300
Query: 278 DEVKSSLSASTNPELGSNVSGTQTYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAG 337
DEVKSSLSASTNPELGSNVSGTQTYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAG
Sbjct: 301 DEVKSSLSASTNPELGSNVSGTQTYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAG 360
Query: 338 MVPGSEFSGNPYSHPQYTAYNEAWRFSNPALLMPPPGPPLPLLPLPMTATSYRGDHIKLQ 397
MVPGSEFSGNPYSHPQYTAYNEAWRFSNPALLMPPPGPPLPLLPLPMTATSYRGDHIKLQ
Sbjct: 361 MVPGSEFSGNPYSHPQYTAYNEAWRFSNPALLMPPPGPPLPLLPLPMTATSYRGDHIKLQ 420
Query: 398 ADSFGLHIVPV 408
ADSFGLHIVPV
Sbjct: 421 ADSFGLHIVPV 431
>gi|34878701 paired box protein 2 isoform b [Homo sapiens]
Length = 393
Score = 758 bits (1958), Expect = 0.0
Identities = 370/372 (99%), Positives = 370/372 (99%)
Query: 1 MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV 60
MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
Sbjct: 1 MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV 60
Query: 61 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA 120
SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA
Sbjct: 61 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA 120
Query: 121 EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASND 180
EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASND
Sbjct: 121 EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASND 180
Query: 181 PVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEA 240
PVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEA
Sbjct: 181 PVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEA 240
Query: 241 LDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQ 300
LDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQ
Sbjct: 241 LDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQ 300
Query: 301 TYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNEA 360
TYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNEA
Sbjct: 301 TYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNEA 360
Query: 361 WRFSNPALLMPP 372
WRFSNPALL P
Sbjct: 361 WRFSNPALLSSP 372
>gi|34878699 paired box protein 2 isoform a [Homo sapiens]
Length = 416
Score = 745 bits (1924), Expect = 0.0
Identities = 370/395 (93%), Positives = 370/395 (93%), Gaps = 23/395 (5%)
Query: 1 MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV 60
MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
Sbjct: 1 MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV 60
Query: 61 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA 120
SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA
Sbjct: 61 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA 120
Query: 121 EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASND 180
EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASND
Sbjct: 121 EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASND 180
Query: 181 PVGSYSINGILGIPRSNGEKRKRDE-----------------------DVSEGSVPNGDS 217
PVGSYSINGILGIPRSNGEKRKRDE DVSEGSVPNGDS
Sbjct: 181 PVGSYSINGILGIPRSNGEKRKRDEVEVYTDPAHIRGGGGLHLVWTLRDVSEGSVPNGDS 240
Query: 218 QSGVDSLRKHLRADTFTQQQLEALDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGL 277
QSGVDSLRKHLRADTFTQQQLEALDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGL
Sbjct: 241 QSGVDSLRKHLRADTFTQQQLEALDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGL 300
Query: 278 DEVKSSLSASTNPELGSNVSGTQTYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAG 337
DEVKSSLSASTNPELGSNVSGTQTYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAG
Sbjct: 301 DEVKSSLSASTNPELGSNVSGTQTYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAG 360
Query: 338 MVPGSEFSGNPYSHPQYTAYNEAWRFSNPALLMPP 372
MVPGSEFSGNPYSHPQYTAYNEAWRFSNPALL P
Sbjct: 361 MVPGSEFSGNPYSHPQYTAYNEAWRFSNPALLSSP 395
>gi|34878709 paired box protein 2 isoform c [Homo sapiens]
Length = 396
Score = 693 bits (1789), Expect = 0.0
Identities = 340/340 (100%), Positives = 340/340 (100%)
Query: 1 MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV 60
MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
Sbjct: 1 MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV 60
Query: 61 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA 120
SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA
Sbjct: 61 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA 120
Query: 121 EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASND 180
EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASND
Sbjct: 121 EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASND 180
Query: 181 PVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEA 240
PVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEA
Sbjct: 181 PVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEA 240
Query: 241 LDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQ 300
LDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQ
Sbjct: 241 LDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQ 300
Query: 301 TYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVP 340
TYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVP
Sbjct: 301 TYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVP 340
>gi|9951920 paired box 5 [Homo sapiens]
Length = 391
Score = 511 bits (1316), Expect = e-145
Identities = 260/361 (72%), Positives = 291/361 (80%), Gaps = 11/361 (3%)
Query: 16 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYET 75
GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYET
Sbjct: 16 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYET 75
Query: 76 GSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSI 135
GSIKPGVIGGSKPKVATPKVV+KIAEYKRQNPTMFAWEIRDRLLAE +CDNDTVPSVSSI
Sbjct: 76 GSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVPSVSSI 135
Query: 136 NRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVG-SYSINGILGI- 193
NRIIRTKVQQP V A H+IV + + VSS S D G SYSI+GILGI
Sbjct: 136 NRIIRTKVQQP-------PNQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYSISGILGIT 188
Query: 194 -PRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEALDRVFERPSYPD 252
P ++ KRKRDE + E VPNG S G D LRK +R D FTQQQLE LDRVFER Y D
Sbjct: 189 SPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRVFERQHYSD 248
Query: 253 VFQASEHIKSEQGNEYS-LPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVVTGRDMA 311
+F +E IK EQ EYS + +L GLD++K++L++ T ++GS+V G Q+YP+VTGRD+A
Sbjct: 249 IFTTTEPIKPEQTTEYSAMASLAGGLDDMKANLASPTPADIGSSVPGPQSYPIVTGRDLA 308
Query: 312 STTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNEAWRFSNPALLMP 371
STTLPGYPPHVPP GQGSY TL GMVPGSEFSG+PYSHPQY++YN++WRF NP LL
Sbjct: 309 STTLPGYPPHVPPAGQGSYSAPTLTGMVPGSEFSGSPYSHPQYSSYNDSWRFPNPGLLGS 368
Query: 372 P 372
P
Sbjct: 369 P 369
>gi|7524361 paired box 8 isoform PAX8B [Homo sapiens]
Length = 387
Score = 474 bits (1221), Expect = e-134
Identities = 244/391 (62%), Positives = 290/391 (74%), Gaps = 10/391 (2%)
Query: 9 PFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKI 68
P +++ GHGG+NQLGG FVNGRPLP+VVRQRIV+LAHQGVRPCDISRQLRVSHGCVSKI
Sbjct: 2 PHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKI 61
Query: 69 LGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDT 128
LGRYYETGSI+PGVIGGSKPKVATPKVV+KI +YKRQNPTMFAWEIRDRLLAEG+CDNDT
Sbjct: 62 LGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDT 121
Query: 129 VPSVSSINRIIRTKVQQPFH-PTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGS-YS 186
VPSVSSINRIIRTKVQQPF+ P T +PGHT++PS+A P S +D +GS YS
Sbjct: 122 VPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYS 181
Query: 187 INGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEALDRVFE 246
ING+LGI + +KRK D+ + + DSQS RKHLR D F+Q LE L+ FE
Sbjct: 182 INGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPFE 241
Query: 247 RPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVVT 306
R YP+ + + H K EQG Y LP L LD+ K++L+ S P LG N+S QTYPVV
Sbjct: 242 RQHYPEAYASPSHTKGEQG-LYPLPLLNSTLDDGKATLTPSNTP-LGRNLSTHQTYPVVA 299
Query: 307 GRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNEAWRFSNP 366
GR+M TLPGYPPH+P +GQGSY +S +AGMV GSE+SGN Y H Y++Y+EAWRF N
Sbjct: 300 GREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAYGHTPYSSYSEAWRFPNS 359
Query: 367 ALLMPP---PGPPLPLLPLPMTATSYRGDHI 394
+LL P P P P TAT++ DH+
Sbjct: 360 SLLSSPYYYSSTSRPSAP-PTTATAF--DHL 387
>gi|5803117 paired box 8 isoform PAX8A [Homo sapiens]
Length = 450
Score = 420 bits (1080), Expect = e-117
Identities = 240/454 (52%), Positives = 287/454 (63%), Gaps = 73/454 (16%)
Query: 9 PFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKI 68
P +++ GHGG+NQLGG FVNGRPLP+VVRQRIV+LAHQGVRPCDISRQLRVSHGCVSKI
Sbjct: 2 PHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKI 61
Query: 69 LGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDT 128
LGRYYETGSI+PGVIGGSKPKVATPKVV+KI +YKRQNPTMFAWEIRDRLLAEG+CDNDT
Sbjct: 62 LGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDT 121
Query: 129 VPSVSSINRIIRTKVQQPFH-PTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGS-YS 186
VPSVSSINRIIRTKVQQPF+ P T +PGHT++PS+A P S +D +GS YS
Sbjct: 122 VPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYS 181
Query: 187 INGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEALDRVFE 246
ING+LGI + +KRK D+ + + DSQS RKHLR D F+Q LE L+ FE
Sbjct: 182 INGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPFE 241
Query: 247 RPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVV- 305
R YP+ + + H K EQG Y LP L LD+ K++L+ S P LG N+S QTYPVV
Sbjct: 242 RQHYPEAYASPSHTKGEQG-LYPLPLLNSTLDDGKATLTPSNTP-LGRNLSTHQTYPVVA 299
Query: 306 -----------TGRDMASTTLP----------------GYPPH----------------- 321
T +S++ P G PP
Sbjct: 300 DPHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVGSGVPPFNAFPHAASVYGQFTGQA 359
Query: 322 --------------VPP----TGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNEAWRF 363
PP +GQGSY +S +AGMV GSE+SGN Y H Y++Y+EAWRF
Sbjct: 360 LLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAYGHTPYSSYSEAWRF 419
Query: 364 SNPALLMPP---PGPPLPLLPLPMTATSYRGDHI 394
N +LL P P P P TAT++ DH+
Sbjct: 420 PNSSLLSSPYYYSSTSRPSAP-PTTATAF--DHL 450
>gi|7524363 paired box 8 isoform PAX8C [Homo sapiens]
Length = 398
Score = 384 bits (987), Expect = e-107
Identities = 216/386 (55%), Positives = 257/386 (66%), Gaps = 18/386 (4%)
Query: 9 PFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKI 68
P +++ GHGG+NQLGG FVNGRPLP+VVRQRIV+LAHQGVRPCDISRQLRVSHGCVSKI
Sbjct: 2 PHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKI 61
Query: 69 LGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDT 128
LGRYYETGSI+PGVIGGSKPKVATPKVV+KI +YKRQNPTMFAWEIRDRLLAEG+CDNDT
Sbjct: 62 LGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDT 121
Query: 129 VPSVSSINRIIRTKVQQPFH-PTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGS-YS 186
VPSVSSINRIIRTKVQQPF+ P T +PGHT++PS+A P S +D +GS YS
Sbjct: 122 VPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYS 181
Query: 187 INGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEALDRVFE 246
ING+LGI + +KRK D+ + + DSQS RKHLR D F+Q LE L+ FE
Sbjct: 182 INGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPFE 241
Query: 247 RPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVVT 306
R YP+ + + H K EQG Y LP L LD+ K++L+ S P LG N+S QTYPVV
Sbjct: 242 RQHYPEAYASPSHTKGEQG-LYPLPLLNSTLDDGKATLTPSNTP-LGRNLSTHQTYPVVA 299
Query: 307 GRD--MASTTLPGYPPHVP-PTGQGSYPTSTLAGMVPGSEFSG------NPYSHPQYTAY 357
+ S + PG P +P P +S G + G +P S P A
Sbjct: 300 APPFWICSKSAPGSRPSMPFPMLPPCTGSSRARPSSQGERWWGPRCPDTHPTSPPADRAA 359
Query: 358 -----NEAWRFSNPALLMPPPGPPLP 378
++AW L MP PP P
Sbjct: 360 MPPLPSQAWWQEVNTLAMPMATPPTP 385
>gi|7524365 paired box 8 isoform PAX8D [Homo sapiens]
Length = 321
Score = 355 bits (912), Expect = 3e-98
Identities = 188/327 (57%), Positives = 225/327 (68%), Gaps = 13/327 (3%)
Query: 9 PFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKI 68
P +++ GHGG+NQLGG FVNGRPLP+VVRQRIV+LAHQGVRPCDISRQLRVSHGCVSKI
Sbjct: 2 PHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKI 61
Query: 69 LGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDT 128
LGRYYETGSI+PGVIGGSKPKVATPKVV+KI +YKRQNPTMFAWEIRDRLLAEG+CDNDT
Sbjct: 62 LGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDT 121
Query: 129 VPSVSSINRIIRTKVQQPFH-PTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGS-YS 186
VPSVSSINRIIRTKVQQPF+ P T +PGHT++PS+A P S +D +GS YS
Sbjct: 122 VPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYS 181
Query: 187 INGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEALDRVFE 246
ING+LGI + +KRK D+ + + DSQS RKHLR D F+Q LE L+ FE
Sbjct: 182 INGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPFE 241
Query: 247 RPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVVT 306
R YP+ + + H K EQG + P P + P L S
Sbjct: 242 RQHYPEAYASPSHTKGEQGERWWGPR-CPDTHPTSPPADRAAMPPLPSQ---------AW 291
Query: 307 GRDMASTTLPGYPPHVPPTGQ-GSYPT 332
+++ + +P P PPT + G+ PT
Sbjct: 292 WQEVNTLAMPMATPPTPPTARPGASPT 318
>gi|7669542 paired box 8 isoform PAX8E [Homo sapiens]
Length = 287
Score = 353 bits (907), Expect = 1e-97
Identities = 178/270 (65%), Positives = 208/270 (77%), Gaps = 3/270 (1%)
Query: 9 PFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKI 68
P +++ GHGG+NQLGG FVNGRPLP+VVRQRIV+LAHQGVRPCDISRQLRVSHGCVSKI
Sbjct: 2 PHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKI 61
Query: 69 LGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDT 128
LGRYYETGSI+PGVIGGSKPKVATPKVV+KI +YKRQNPTMFAWEIRDRLLAEG+CDNDT
Sbjct: 62 LGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDT 121
Query: 129 VPSVSSINRIIRTKVQQPFH-PTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGS-YS 186
VPSVSSINRIIRTKVQQPF+ P T +PGHT++PS+A P S +D +GS YS
Sbjct: 122 VPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYS 181
Query: 187 INGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEALDRVFE 246
ING+LGI + +KRK D+ + + DSQS RKHLR D F+Q LE L+ FE
Sbjct: 182 INGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPFE 241
Query: 247 RPSYPDVFQASEHIKSEQG-NEYSLPALTP 275
R YP+ + + H K EQ N ++P TP
Sbjct: 242 RQHYPEAYASPSHTKGEQEVNTLAMPMATP 271
>gi|189083681 paired box gene 6 isoform a [Homo sapiens]
Length = 422
Score = 235 bits (600), Expect = 5e-62
Identities = 137/257 (53%), Positives = 162/257 (63%), Gaps = 34/257 (13%)
Query: 13 MHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRY 72
M H GVNQLGGVFVNGRPLPD RQ+IVELAH G RPCDISR L+VS+GCVSKILGRY
Sbjct: 1 MQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRY 60
Query: 73 YETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSV 132
YETGSI+P IGGSKP+VATP+VV KIA+YKR+ P++FAWEIRDRLL+EG+C ND +PSV
Sbjct: 61 YETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSV 120
Query: 133 SSINRIIRTKVQQPFHPTPDG-----------AGTGVTAPG---HTIVPSTASPPVSSAS 178
SSINR++R + DG G+ T PG T VP P
Sbjct: 121 SSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVP--GQPTQDGCQ 178
Query: 179 NDPVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADT-FTQQQ 237
G + N I SNGE D D ++Q + RK R T FTQ+Q
Sbjct: 179 QQEGGGENTNSI----SSNGE----DSD---------EAQMRLQLKRKLQRNRTSFTQEQ 221
Query: 238 LEALDRVFERPSYPDVF 254
+EAL++ FER YPDVF
Sbjct: 222 IEALEKEFERTHYPDVF 238
>gi|4505615 paired box gene 6 isoform a [Homo sapiens]
Length = 422
Score = 235 bits (600), Expect = 5e-62
Identities = 137/257 (53%), Positives = 162/257 (63%), Gaps = 34/257 (13%)
Query: 13 MHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRY 72
M H GVNQLGGVFVNGRPLPD RQ+IVELAH G RPCDISR L+VS+GCVSKILGRY
Sbjct: 1 MQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRY 60
Query: 73 YETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSV 132
YETGSI+P IGGSKP+VATP+VV KIA+YKR+ P++FAWEIRDRLL+EG+C ND +PSV
Sbjct: 61 YETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSV 120
Query: 133 SSINRIIRTKVQQPFHPTPDG-----------AGTGVTAPG---HTIVPSTASPPVSSAS 178
SSINR++R + DG G+ T PG T VP P
Sbjct: 121 SSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVP--GQPTQDGCQ 178
Query: 179 NDPVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADT-FTQQQ 237
G + N I SNGE D D ++Q + RK R T FTQ+Q
Sbjct: 179 QQEGGGENTNSI----SSNGE----DSD---------EAQMRLQLKRKLQRNRTSFTQEQ 221
Query: 238 LEALDRVFERPSYPDVF 254
+EAL++ FER YPDVF
Sbjct: 222 IEALEKEFERTHYPDVF 238
>gi|4580424 paired box gene 6 isoform b [Homo sapiens]
Length = 436
Score = 226 bits (575), Expect = 4e-59
Identities = 137/271 (50%), Positives = 162/271 (59%), Gaps = 48/271 (17%)
Query: 13 MHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLR------------- 59
M H GVNQLGGVFVNGRPLPD RQ+IVELAH G RPCDISR L+
Sbjct: 1 MQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQ 60
Query: 60 -VSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRL 118
VS+GCVSKILGRYYETGSI+P IGGSKP+VATP+VV KIA+YKR+ P++FAWEIRDRL
Sbjct: 61 NVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRL 120
Query: 119 LAEGICDNDTVPSVSSINRIIRTKVQQPFHPTPDG-----------AGTGVTAPG---HT 164
L+EG+C ND +PSVSSINR++R + DG G+ T PG T
Sbjct: 121 LSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGT 180
Query: 165 IVPSTASPPVSSASNDPVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSL 224
VP P G + N I SNGE D D ++Q +
Sbjct: 181 SVP--GQPTQDGCQQQEGGGENTNSI----SSNGE----DSD---------EAQMRLQLK 221
Query: 225 RKHLRADT-FTQQQLEALDRVFERPSYPDVF 254
RK R T FTQ+Q+EAL++ FER YPDVF
Sbjct: 222 RKLQRNRTSFTQEQIEALEKEFERTHYPDVF 252
>gi|188219638 paired box 3 isoform PAX3i [Homo sapiens]
Length = 483
Score = 224 bits (571), Expect = 1e-58
Identities = 150/382 (39%), Positives = 197/382 (51%), Gaps = 50/382 (13%)
Query: 16 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYET 75
G G VNQLGGVF+NGRPLP+ +R +IVE+AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 76 GSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSI 135
GSI+PG IGGSKPKV TP V KI EYKR+NP MF+WEIRD+LL + +CD +TVPSVSSI
Sbjct: 94 GSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSI 153
Query: 136 NRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGSYSINGILGIPR 195
+RI+R+K + D + ++ +SI+GIL R
Sbjct: 154 SRILRSKFGKGEEEEAD------------------LERKEAEESEKKAKHSIDGILS-ER 194
Query: 196 SNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRA-DTFTQQQLEALDRVFERPSYPDVF 254
++ + D+ DS+ + RK R+ TFT +QLE L+R FER YPD++
Sbjct: 195 ASAPQSDEGSDI--------DSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIY 246
Query: 255 QASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVVTG-RDMAST 313
E + + E + S+ A + G+N + + G A
Sbjct: 247 TREELAQRAKLTEARVQVWF-------SNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP 299
Query: 314 TLPGY--------PPHVP-----PTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNEA 360
TLP Y P +P P+ P V S NP S Y +
Sbjct: 300 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR 359
Query: 361 WRFSN-PALLMPPPGPPLPLLP 381
FS+ +PP GP P+ P
Sbjct: 360 HGFSSYTDSFVPPSGPSNPMNP 381
>gi|31563348 paired box 3 isoform PAX3g [Homo sapiens]
Length = 403
Score = 219 bits (559), Expect = 3e-57
Identities = 150/383 (39%), Positives = 197/383 (51%), Gaps = 51/383 (13%)
Query: 16 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYET 75
G G VNQLGGVF+NGRPLP+ +R +IVE+AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 76 GSIKPGVIGGSKPK-VATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSS 134
GSI+PG IGGSKPK V TP V KI EYKR+NP MF+WEIRD+LL + +CD +TVPSVSS
Sbjct: 94 GSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSS 153
Query: 135 INRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGSYSINGILGIP 194
I+RI+R+K + D + ++ +SI+GIL
Sbjct: 154 ISRILRSKFGKGEEEEAD------------------LERKEAEESEKKAKHSIDGILS-E 194
Query: 195 RSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRA-DTFTQQQLEALDRVFERPSYPDV 253
R++ + D+ DS+ + RK R+ TFT +QLE L+R FER YPD+
Sbjct: 195 RASAPQSDEGSDI--------DSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDI 246
Query: 254 FQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVVTG-RDMAS 312
+ E + + E + S+ A + G+N + + G A
Sbjct: 247 YTREELAQRAKLTEARVQVWF-------SNRRARWRKQAGANQLMAFNHLIPGGFPPTAM 299
Query: 313 TTLPGY--------PPHVP-----PTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNE 359
TLP Y P +P P+ P V S NP S Y +
Sbjct: 300 PTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPST 359
Query: 360 AWRFSN-PALLMPPPGPPLPLLP 381
FS+ +PP GP P+ P
Sbjct: 360 RHGFSSYTDSFVPPSGPSNPMNP 382
>gi|31563346 paired box 3 isoform PAX3h [Homo sapiens]
Length = 407
Score = 219 bits (559), Expect = 3e-57
Identities = 150/383 (39%), Positives = 197/383 (51%), Gaps = 51/383 (13%)
Query: 16 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYET 75
G G VNQLGGVF+NGRPLP+ +R +IVE+AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 76 GSIKPGVIGGSKPK-VATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSS 134
GSI+PG IGGSKPK V TP V KI EYKR+NP MF+WEIRD+LL + +CD +TVPSVSS
Sbjct: 94 GSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSS 153
Query: 135 INRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGSYSINGILGIP 194
I+RI+R+K + D + ++ +SI+GIL
Sbjct: 154 ISRILRSKFGKGEEEEAD------------------LERKEAEESEKKAKHSIDGILS-E 194
Query: 195 RSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRA-DTFTQQQLEALDRVFERPSYPDV 253
R++ + D+ DS+ + RK R+ TFT +QLE L+R FER YPD+
Sbjct: 195 RASAPQSDEGSDI--------DSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDI 246
Query: 254 FQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVVTG-RDMAS 312
+ E + + E + S+ A + G+N + + G A
Sbjct: 247 YTREELAQRAKLTEARVQVWF-------SNRRARWRKQAGANQLMAFNHLIPGGFPPTAM 299
Query: 313 TTLPGY--------PPHVP-----PTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNE 359
TLP Y P +P P+ P V S NP S Y +
Sbjct: 300 PTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPST 359
Query: 360 AWRFSN-PALLMPPPGPPLPLLP 381
FS+ +PP GP P+ P
Sbjct: 360 RHGFSSYTDSFVPPSGPSNPMNP 382
>gi|31563344 paired box 3 isoform PAX3e [Homo sapiens]
Length = 505
Score = 219 bits (559), Expect = 3e-57
Identities = 150/383 (39%), Positives = 197/383 (51%), Gaps = 51/383 (13%)
Query: 16 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYET 75
G G VNQLGGVF+NGRPLP+ +R +IVE+AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 76 GSIKPGVIGGSKPK-VATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSS 134
GSI+PG IGGSKPK V TP V KI EYKR+NP MF+WEIRD+LL + +CD +TVPSVSS
Sbjct: 94 GSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSS 153
Query: 135 INRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGSYSINGILGIP 194
I+RI+R+K + D + ++ +SI+GIL
Sbjct: 154 ISRILRSKFGKGEEEEAD------------------LERKEAEESEKKAKHSIDGILS-E 194
Query: 195 RSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRA-DTFTQQQLEALDRVFERPSYPDV 253
R++ + D+ DS+ + RK R+ TFT +QLE L+R FER YPD+
Sbjct: 195 RASAPQSDEGSDI--------DSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDI 246
Query: 254 FQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVVTG-RDMAS 312
+ E + + E + S+ A + G+N + + G A
Sbjct: 247 YTREELAQRAKLTEARVQVWF-------SNRRARWRKQAGANQLMAFNHLIPGGFPPTAM 299
Query: 313 TTLPGY--------PPHVP-----PTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNE 359
TLP Y P +P P+ P V S NP S Y +
Sbjct: 300 PTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPST 359
Query: 360 AWRFSN-PALLMPPPGPPLPLLP 381
FS+ +PP GP P+ P
Sbjct: 360 RHGFSSYTDSFVPPSGPSNPMNP 382
>gi|31563342 paired box 3 isoform PAX3d [Homo sapiens]
Length = 484
Score = 219 bits (559), Expect = 3e-57
Identities = 150/383 (39%), Positives = 197/383 (51%), Gaps = 51/383 (13%)
Query: 16 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYET 75
G G VNQLGGVF+NGRPLP+ +R +IVE+AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 76 GSIKPGVIGGSKPK-VATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSS 134
GSI+PG IGGSKPK V TP V KI EYKR+NP MF+WEIRD+LL + +CD +TVPSVSS
Sbjct: 94 GSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSS 153
Query: 135 INRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGSYSINGILGIP 194
I+RI+R+K + D + ++ +SI+GIL
Sbjct: 154 ISRILRSKFGKGEEEEAD------------------LERKEAEESEKKAKHSIDGILS-E 194
Query: 195 RSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRA-DTFTQQQLEALDRVFERPSYPDV 253
R++ + D+ DS+ + RK R+ TFT +QLE L+R FER YPD+
Sbjct: 195 RASAPQSDEGSDI--------DSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDI 246
Query: 254 FQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVVTG-RDMAS 312
+ E + + E + S+ A + G+N + + G A
Sbjct: 247 YTREELAQRAKLTEARVQVWF-------SNRRARWRKQAGANQLMAFNHLIPGGFPPTAM 299
Query: 313 TTLPGY--------PPHVP-----PTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNE 359
TLP Y P +P P+ P V S NP S Y +
Sbjct: 300 PTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPST 359
Query: 360 AWRFSN-PALLMPPPGPPLPLLP 381
FS+ +PP GP P+ P
Sbjct: 360 RHGFSSYTDSFVPPSGPSNPMNP 382
>gi|31563340 paired box 3 isoform PAX3 [Homo sapiens]
Length = 479
Score = 219 bits (559), Expect = 3e-57
Identities = 150/383 (39%), Positives = 197/383 (51%), Gaps = 51/383 (13%)
Query: 16 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYET 75
G G VNQLGGVF+NGRPLP+ +R +IVE+AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 76 GSIKPGVIGGSKPK-VATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSS 134
GSI+PG IGGSKPK V TP V KI EYKR+NP MF+WEIRD+LL + +CD +TVPSVSS
Sbjct: 94 GSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSS 153
Query: 135 INRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGSYSINGILGIP 194
I+RI+R+K + D + ++ +SI+GIL
Sbjct: 154 ISRILRSKFGKGEEEEAD------------------LERKEAEESEKKAKHSIDGILS-E 194
Query: 195 RSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRA-DTFTQQQLEALDRVFERPSYPDV 253
R++ + D+ DS+ + RK R+ TFT +QLE L+R FER YPD+
Sbjct: 195 RASAPQSDEGSDI--------DSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDI 246
Query: 254 FQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVVTG-RDMAS 312
+ E + + E + S+ A + G+N + + G A
Sbjct: 247 YTREELAQRAKLTEARVQVWF-------SNRRARWRKQAGANQLMAFNHLIPGGFPPTAM 299
Query: 313 TTLPGY--------PPHVP-----PTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNE 359
TLP Y P +P P+ P V S NP S Y +
Sbjct: 300 PTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPST 359
Query: 360 AWRFSN-PALLMPPPGPPLPLLP 381
FS+ +PP GP P+ P
Sbjct: 360 RHGFSSYTDSFVPPSGPSNPMNP 382
>gi|7524359 paired box 7 isoform 2 [Homo sapiens]
Length = 518
Score = 218 bits (556), Expect = 6e-57
Identities = 140/340 (41%), Positives = 183/340 (53%), Gaps = 50/340 (14%)
Query: 16 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYET 75
G G VNQLGGVF+NGRPLP+ +R +IVE+AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 76 GSIKPGVIGGSKPK-VATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSS 134
GSI+PG IGGSKP+ VATP V KI EYKR+NP MF+WEIRDRLL +G CD TVPSVSS
Sbjct: 94 GSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSVSS 153
Query: 135 INRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGSYSINGILGIP 194
I+R++R K + + +SI+GILG
Sbjct: 154 ISRVLRIKFGKK--------------------EEEDEADKKEDDGEKKAKHSIDGILG-- 191
Query: 195 RSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRA-DTFTQQQLEALDRVFERPSYPDV 253
G + DV +S+ + RK R+ TFT +QLE L++ FER YPD+
Sbjct: 192 -DKGNRLDEGSDV--------ESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDI 242
Query: 254 FQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVVTGRDMAST 313
+ E + + E + S+ A + G+N + + G T
Sbjct: 243 YTREELAQRTKLTEARVQVWF-------SNRRARWRKQAGANQLAAFNHLLPGG--FPPT 293
Query: 314 TLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQ 353
+P PP+ P +YPT+T+ S+ G+ PQ
Sbjct: 294 GMPTLPPYQLP--DSTYPTTTI------SQDGGSTVHRPQ 325
>gi|4505619 paired box 7 isoform 1 [Homo sapiens]
Length = 520
Score = 213 bits (543), Expect = 2e-55
Identities = 140/342 (40%), Positives = 183/342 (53%), Gaps = 52/342 (15%)
Query: 16 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYET 75
G G VNQLGGVF+NGRPLP+ +R +IVE+AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 76 GSIKPGVIGGSKPK-VATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPS--V 132
GSI+PG IGGSKP+ VATP V KI EYKR+NP MF+WEIRDRLL +G CD TVPS V
Sbjct: 94 GSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLV 153
Query: 133 SSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGSYSINGILG 192
SSI+R++R K + + +SI+GILG
Sbjct: 154 SSISRVLRIKFGKK--------------------EEEDEADKKEDDGEKKAKHSIDGILG 193
Query: 193 IPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRA-DTFTQQQLEALDRVFERPSYP 251
G + DV +S+ + RK R+ TFT +QLE L++ FER YP
Sbjct: 194 ---DKGNRLDEGSDV--------ESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYP 242
Query: 252 DVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVVTGRDMA 311
D++ E + + E + S+ A + G+N + + G
Sbjct: 243 DIYTREELAQRTKLTEARVQVWF-------SNRRARWRKQAGANQLAAFNHLLPGG--FP 293
Query: 312 STTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQ 353
T +P PP+ P +YPT+T+ S+ G+ PQ
Sbjct: 294 PTGMPTLPPYQLP--DSTYPTTTI------SQDGGSTVHRPQ 327
>gi|207029223 paired box 7 isoform 3 [Homo sapiens]
Length = 505
Score = 213 bits (543), Expect = 2e-55
Identities = 140/342 (40%), Positives = 183/342 (53%), Gaps = 52/342 (15%)
Query: 16 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYET 75
G G VNQLGGVF+NGRPLP+ +R +IVE+AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 76 GSIKPGVIGGSKPK-VATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPS--V 132
GSI+PG IGGSKP+ VATP V KI EYKR+NP MF+WEIRDRLL +G CD TVPS V
Sbjct: 94 GSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLV 153
Query: 133 SSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGSYSINGILG 192
SSI+R++R K + + +SI+GILG
Sbjct: 154 SSISRVLRIKFGKK--------------------EEEDEADKKEDDGEKKAKHSIDGILG 193
Query: 193 IPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRA-DTFTQQQLEALDRVFERPSYP 251
G + DV +S+ + RK R+ TFT +QLE L++ FER YP
Sbjct: 194 ---DKGNRLDEGSDV--------ESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYP 242
Query: 252 DVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVVTGRDMA 311
D++ E + + E + S+ A + G+N + + G
Sbjct: 243 DIYTREELAQRTKLTEARVQVWF-------SNRRARWRKQAGANQLAAFNHLLPGG--FP 293
Query: 312 STTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQ 353
T +P PP+ P +YPT+T+ S+ G+ PQ
Sbjct: 294 PTGMPTLPPYQLP--DSTYPTTTI------SQDGGSTVHRPQ 327
>gi|197276661 paired box 1 [Homo sapiens]
Length = 534
Score = 203 bits (516), Expect = 3e-52
Identities = 156/408 (38%), Positives = 194/408 (47%), Gaps = 59/408 (14%)
Query: 12 AMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71
AM +G VNQLGGVFVNGRPLP+ +R RIVELA G+RPCDISRQLRVSHGCVSKIL R
Sbjct: 94 AMEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 153
Query: 72 YYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPS 131
Y ETGSI PG IGGSKP+V TP VV I +YK+ +P +FAWEIRDRLLA+G+CD VPS
Sbjct: 154 YNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVPS 213
Query: 132 VSSINRIIRTKVQQPFHPTPDGAG----TGVTAPGHTI----VPSTASPPVSSASNDPVG 183
VSSI+RI+R K+ P P A + T P + I PS SP + + P G
Sbjct: 214 VSSISRILRNKIGSLAQPGPYEASKQPPSQPTLPYNHIYQYPYPSPVSPTGAKMGSHP-G 272
Query: 184 SYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQ--QLEAL 241
G + IPR S P+ S S + +R TF +Q L
Sbjct: 273 VPGTAGHVSIPR---------------SWPSAHSVSNILGIR------TFMEQTGALAGS 311
Query: 242 DRVFERPSYPD-------VFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGS 294
+ P D F A+ + N PAL ++K + SAST +G
Sbjct: 312 EGTAYSPKMEDWAGVNRTAFPATPAV-----NGLEKPALEA---DIKYTQSASTLSAVGG 363
Query: 295 NVSGTQTYPVVTGRDMASTTLPGY----PPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYS 350
+ YP + S GY PP P G P + G + +
Sbjct: 364 FLPAC-AYPASNQHGVYSAPGGGYLAPGPPWPPAQGPPLAPPGAGVAVHGGELAAAMTFK 422
Query: 351 HPQYTAYNEAWRFSNPALLMPPPGPPLPLLPLPMTATSYRGDHIKLQA 398
HP S PA P P + P RG + +A
Sbjct: 423 HPSREG-------SLPAPAARPRTPSVAYTDCPSRPRPPRGSSPRTRA 463
>gi|7242167 paired box 9 [Homo sapiens]
Length = 341
Score = 199 bits (507), Expect = 3e-51
Identities = 111/209 (53%), Positives = 131/209 (62%), Gaps = 33/209 (15%)
Query: 13 MHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRY 72
M P G VNQLGGVFVNGRPLP+ +R RIVELA G+RPCDISRQLRVSHGCVSKIL RY
Sbjct: 1 MEPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY 60
Query: 73 YETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSV 132
ETGSI PG IGGSKP+V TP VV I YK+++P +FAWEIRDRLLA+G+CD VPSV
Sbjct: 61 NETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVPSV 120
Query: 133 SSINRIIRTKV-----------QQPFHPTPD-----------------GAGTGVTAPGHT 164
SSI+RI+R K+ + PTP A T PG
Sbjct: 121 SSISRILRNKIGNLAQQGHYDSYKQHQPTPQPALPYNHIYSYPSPITAAAAKVPTPPGVP 180
Query: 165 IVPSTASPPVSSASNDPVGSYSINGILGI 193
+P + + P + S S+S+ ILGI
Sbjct: 181 AIPGSVAMPRTWPS-----SHSVTDILGI 204
>gi|7524356 paired box 3 isoform PAX3b [Homo sapiens]
Length = 206
Score = 194 bits (493), Expect = 1e-49
Identities = 93/128 (72%), Positives = 109/128 (85%), Gaps = 1/128 (0%)
Query: 16 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYET 75
G G VNQLGGVF+NGRPLP+ +R +IVE+AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 76 GSIKPGVIGGSKPK-VATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSS 134
GSI+PG IGGSKPK V TP V KI EYKR+NP MF+WEIRD+LL + +CD +TVPSVSS
Sbjct: 94 GSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSS 153
Query: 135 INRIIRTK 142
I+RI+R+K
Sbjct: 154 ISRILRSK 161
>gi|6654638 paired box 3 isoform PAX3a [Homo sapiens]
Length = 215
Score = 194 bits (493), Expect = 1e-49
Identities = 93/128 (72%), Positives = 109/128 (85%), Gaps = 1/128 (0%)
Query: 16 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYET 75
G G VNQLGGVF+NGRPLP+ +R +IVE+AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 76 GSIKPGVIGGSKPK-VATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSS 134
GSI+PG IGGSKPK V TP V KI EYKR+NP MF+WEIRD+LL + +CD +TVPSVSS
Sbjct: 94 GSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSS 153
Query: 135 INRIIRTK 142
I+RI+R+K
Sbjct: 154 ISRILRSK 161
>gi|170784824 paired box 4 [Homo sapiens]
Length = 343
Score = 169 bits (429), Expect = 3e-42
Identities = 100/233 (42%), Positives = 131/233 (56%), Gaps = 45/233 (19%)
Query: 20 VNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIK 79
+NQLGG+FVNGRPLP RQ+IV LA G+RPCDISR L+VS+GCVSKILGRYY TG ++
Sbjct: 1 MNQLGGLFVNGRPLPLDTRQQIVRLAVSGMRPCDISRILKVSNGCVSKILGRYYRTGVLE 60
Query: 80 PGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRII 139
P IGGSKP++ATP VV +IA+ K + P +FAWEI+ +L AEG+C D PSVSSINR++
Sbjct: 61 PKGIGGSKPRLATPPVVARIAQLKGECPALFAWEIQRQLCAEGLCTQDKTPSVSSINRVL 120
Query: 140 RTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGSYSINGILGIPRSNGE 199
R + P T + +P + P+ +P S S P G++ G
Sbjct: 121 RALQEDQGLPC-----TRLRSPA-VLAPAVLTP--HSGSETPRGTHPGTG---------- 162
Query: 200 KRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEALDRVFERPSYPD 252
H F+ Q EAL++ F+R YPD
Sbjct: 163 ---------------------------HRNRTIFSPSQAEALEKEFQRGQYPD 188
>gi|126116581 retina and anterior neural fold homeobox [Homo
sapiens]
Length = 346
Score = 43.5 bits (101), Expect = 3e-04
Identities = 47/165 (28%), Positives = 64/165 (38%), Gaps = 17/165 (10%)
Query: 225 RKHLR-ADTFTQQQLEALDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSS 283
+KH R TFT QL L+R FE+ YPDV+ + E + +LP + +
Sbjct: 134 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYS-----REELAGKVNLPEVRVQVWFQNRR 188
Query: 284 LSASTNPELGSNVSGTQTYPVVT-GRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGS 342
+L + Q P+++ R S TL P G G P G +P
Sbjct: 189 AKWRRQEKLEVSSMKLQDSPLLSFSRSPPSATL---SPLGAGPGSGGGPA---GGALPLE 242
Query: 343 EFSGNPYSHPQYTAYNEAWRFSNPALLMP----PPGPPLPLLPLP 383
+ G P TA F PA +P PP PP P L P
Sbjct: 243 SWLGPPLPGGGATALQSLPGFGPPAQSLPASYTPPPPPPPFLNSP 287
>gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo
sapiens]
Length = 939
Score = 43.1 bits (100), Expect = 4e-04
Identities = 37/104 (35%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 294 SNVSGTQTYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPY---- 349
S+ Q P+V AST GY PT G P S+ + + S NP
Sbjct: 142 SHAQPPQQAPIVESGQPASTLSSGY---TYPTATGVQPESSASIVTSYPPPSYNPTCTAY 198
Query: 350 ---SHPQYTA--YNEAWRFSNPALLMPPPGPPLPLLPLPMTATS 388
S+P Y A Y+ A F PA PPPGPP L P P A S
Sbjct: 199 TAPSYPNYDASVYSAASPFYPPAQPPPPPGPPQQLPPPPAPAGS 242
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,260,670
Number of Sequences: 37866
Number of extensions: 1059392
Number of successful extensions: 5353
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 181
Number of HSP's that attempted gapping in prelim test: 4805
Number of HSP's gapped (non-prelim): 698
length of query: 408
length of database: 18,247,518
effective HSP length: 105
effective length of query: 303
effective length of database: 14,271,588
effective search space: 4324291164
effective search space used: 4324291164
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.