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Search of human proteins with 34594669
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|34594669 HCCA2 protein [Homo sapiens]
(237 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|34594669 HCCA2 protein [Homo sapiens] 498 e-141
gi|27735029 MOB1, Mps One Binder kinase activator-like 1A [Homo ... 165 3e-41
gi|148747437 Mob4B protein [Homo sapiens] 163 1e-40
gi|41406059 MOB1, Mps One Binder kinase activator-like 2C isofor... 131 4e-31
gi|41406061 MOB1, Mps One Binder kinase activator-like 2C isofor... 131 4e-31
gi|18677731 MOB-LAK [Homo sapiens] 130 8e-31
gi|41350330 MOB1, Mps One Binder kinase activator-like 2B [Homo ... 126 2e-29
gi|155030224 Mps One Binder kinase activator-like 3 isoform 3 [H... 36 0.025
gi|41349451 Mps One Binder kinase activator-like 3 isoform 2 [Ho... 36 0.025
gi|41349449 Mps One Binder kinase activator-like 3 isoform 1 [Ho... 36 0.025
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 33 0.22
gi|13994190 frizzled 8 [Homo sapiens] 33 0.28
gi|188497630 hypothetical protein LOC55571 [Homo sapiens] 33 0.28
gi|33620755 YEATS domain containing 2 [Homo sapiens] 32 0.37
gi|134288906 tripartite motif-containing 67 [Homo sapiens] 32 0.37
gi|55956899 keratin 9 [Homo sapiens] 31 0.82
gi|125987596 sodium bicarbonate transporter 4 isoform a [Homo sa... 31 0.82
gi|19743827 sodium bicarbonate transporter 4 isoform c [Homo sap... 31 0.82
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 31 0.82
gi|140161500 ankyrin repeat and sterile alpha motif domain conta... 31 0.82
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 31 0.82
gi|88759346 GATA zinc finger domain containing 1 [Homo sapiens] 31 0.82
gi|205360934 fibronectin type III domain containing 3B [Homo sap... 31 0.82
gi|205360932 fibronectin type III domain containing 3B [Homo sap... 31 0.82
gi|4502565 calpain, small subunit 1 [Homo sapiens] 31 0.82
gi|51599151 calpain, small subunit 1 [Homo sapiens] 31 0.82
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 31 0.82
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 31 0.82
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 31 0.82
gi|239756845 PREDICTED: hypothetical protein [Homo sapiens] 31 1.1
>gi|34594669 HCCA2 protein [Homo sapiens]
Length = 237
Score = 498 bits (1282), Expect = e-141
Identities = 237/237 (100%), Positives = 237/237 (100%)
Query: 1 MDWLMGKSKAKPNGKKPAAEERKAYLEPEHTKARITDFQFKELVVLPREIDLNEWLASNT 60
MDWLMGKSKAKPNGKKPAAEERKAYLEPEHTKARITDFQFKELVVLPREIDLNEWLASNT
Sbjct: 1 MDWLMGKSKAKPNGKKPAAEERKAYLEPEHTKARITDFQFKELVVLPREIDLNEWLASNT 60
Query: 61 TTFFHHINLQYSTISEFCTGETCQTMAVCNTQYYWYDERGKKVKCTAPQYVDFVMSSVQK 120
TTFFHHINLQYSTISEFCTGETCQTMAVCNTQYYWYDERGKKVKCTAPQYVDFVMSSVQK
Sbjct: 61 TTFFHHINLQYSTISEFCTGETCQTMAVCNTQYYWYDERGKKVKCTAPQYVDFVMSSVQK 120
Query: 121 LVTDEDVFPTKYGREFPSSFESLVRKICRHLFHVLAHIYWAHFKETLALELHGHLNTLYV 180
LVTDEDVFPTKYGREFPSSFESLVRKICRHLFHVLAHIYWAHFKETLALELHGHLNTLYV
Sbjct: 121 LVTDEDVFPTKYGREFPSSFESLVRKICRHLFHVLAHIYWAHFKETLALELHGHLNTLYV 180
Query: 181 HFILFAREFNLLDPKETAIMDDLTEVLCSGAGGVHSGGSGDGAGSGGPGAQNHVKER 237
HFILFAREFNLLDPKETAIMDDLTEVLCSGAGGVHSGGSGDGAGSGGPGAQNHVKER
Sbjct: 181 HFILFAREFNLLDPKETAIMDDLTEVLCSGAGGVHSGGSGDGAGSGGPGAQNHVKER 237
>gi|27735029 MOB1, Mps One Binder kinase activator-like 1A [Homo
sapiens]
Length = 216
Score = 165 bits (418), Expect = 3e-41
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 4/213 (1%)
Query: 1 MDWLMGKSKAKP-NGKKPAAEERKAYLEPEHTKARITDFQFKELVVLPREIDLNEWLASN 59
M +L G +K KK E Y +H +A + + V+LP DLNEW+A N
Sbjct: 1 MSFLFGSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSGNLRMAVMLPEGEDLNEWVAVN 60
Query: 60 TTTFFHHINLQYSTISEFCTGETCQTMAVC-NTQYYWYDERG--KKVKCTAPQYVDFVMS 116
T FF+ IN+ Y TI++FCT E+C M+ +Y+W D K +KC+AP+Y+D++M+
Sbjct: 61 TVDFFNQINMLYGTITDFCTEESCPVMSAGPKYEYHWADGTNIKKPIKCSAPKYIDYLMT 120
Query: 117 SVQKLVTDEDVFPTKYGREFPSSFESLVRKICRHLFHVLAHIYWAHFKETLALELHGHLN 176
VQ + DE +FP+K G FP +F S+ + I + LF V AHIY HF + L+ HLN
Sbjct: 121 WVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDPVIQLQEEAHLN 180
Query: 177 TLYVHFILFAREFNLLDPKETAIMDDLTEVLCS 209
T + HFI F +EFNL+D +E A + +L E L S
Sbjct: 181 TSFKHFIFFVQEFNLIDRRELAPLQELIEKLTS 213
>gi|148747437 Mob4B protein [Homo sapiens]
Length = 216
Score = 163 bits (413), Expect = 1e-40
Identities = 83/198 (41%), Positives = 119/198 (60%), Gaps = 3/198 (1%)
Query: 15 KKPAAEERKAYLEPEHTKARITDFQFKELVVLPREIDLNEWLASNTTTFFHHINLQYSTI 74
KK E Y +H +A + ++ V+LP DLNEW+A NT FF+ IN+ Y TI
Sbjct: 16 KKNIPEGSHQYELLKHAEATLGSGNLRQAVMLPEGEDLNEWIAVNTVDFFNQINMLYGTI 75
Query: 75 SEFCTGETCQTMAVC-NTQYYWYDERG--KKVKCTAPQYVDFVMSSVQKLVTDEDVFPTK 131
+EFCT +C M+ +Y+W D K +KC+AP+Y+D++M+ VQ + DE +FP+K
Sbjct: 76 TEFCTEASCPVMSAGPRYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSK 135
Query: 132 YGREFPSSFESLVRKICRHLFHVLAHIYWAHFKETLALELHGHLNTLYVHFILFAREFNL 191
G FP +F S+ + I + LF V AHIY HF + L+ HLNT + HFI F +EFNL
Sbjct: 136 IGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDSVMQLQEEAHLNTSFKHFIFFVQEFNL 195
Query: 192 LDPKETAIMDDLTEVLCS 209
+D +E A + +L E L S
Sbjct: 196 IDRRELAPLQELIEKLGS 213
>gi|41406059 MOB1, Mps One Binder kinase activator-like 2C isoform 1
[Homo sapiens]
Length = 268
Score = 131 bits (330), Expect = 4e-31
Identities = 64/171 (37%), Positives = 102/171 (59%), Gaps = 3/171 (1%)
Query: 41 KELVVLPREIDLNEWLASNTTTFFHHINLQYSTISEFCTGETCQTMAVC-NTQYYWYDER 99
+ +V LP ++++W+A + FF+ INL Y T++E C+ +C MA +Y W DER
Sbjct: 97 RSVVRLPPGENIDDWIAVHVVDFFNRINLIYGTMAERCSETSCPVMAGGPRYEYRWQDER 156
Query: 100 G--KKVKCTAPQYVDFVMSSVQKLVTDEDVFPTKYGREFPSSFESLVRKICRHLFHVLAH 157
+ K +AP+Y+ +M ++ L+ DE+VFPT+ G FP +F+ + KI LF V H
Sbjct: 157 QYRRPAKLSAPRYMALLMDWIEGLINDEEVFPTRVGVPFPKNFQQVCTKILTRLFRVFVH 216
Query: 158 IYWAHFKETLALELHGHLNTLYVHFILFAREFNLLDPKETAIMDDLTEVLC 208
+Y HF L++ H+NT Y HF F REF+L+D +E + ++TE +C
Sbjct: 217 VYIHHFDSILSMGAEAHVNTCYKHFYYFIREFSLVDQRELEPLREMTERIC 267
>gi|41406061 MOB1, Mps One Binder kinase activator-like 2C isoform 2
[Homo sapiens]
Length = 216
Score = 131 bits (330), Expect = 4e-31
Identities = 64/171 (37%), Positives = 102/171 (59%), Gaps = 3/171 (1%)
Query: 41 KELVVLPREIDLNEWLASNTTTFFHHINLQYSTISEFCTGETCQTMAVC-NTQYYWYDER 99
+ +V LP ++++W+A + FF+ INL Y T++E C+ +C MA +Y W DER
Sbjct: 45 RSVVRLPPGENIDDWIAVHVVDFFNRINLIYGTMAERCSETSCPVMAGGPRYEYRWQDER 104
Query: 100 G--KKVKCTAPQYVDFVMSSVQKLVTDEDVFPTKYGREFPSSFESLVRKICRHLFHVLAH 157
+ K +AP+Y+ +M ++ L+ DE+VFPT+ G FP +F+ + KI LF V H
Sbjct: 105 QYRRPAKLSAPRYMALLMDWIEGLINDEEVFPTRVGVPFPKNFQQVCTKILTRLFRVFVH 164
Query: 158 IYWAHFKETLALELHGHLNTLYVHFILFAREFNLLDPKETAIMDDLTEVLC 208
+Y HF L++ H+NT Y HF F REF+L+D +E + ++TE +C
Sbjct: 165 VYIHHFDSILSMGAEAHVNTCYKHFYYFIREFSLVDQRELEPLREMTERIC 215
>gi|18677731 MOB-LAK [Homo sapiens]
Length = 217
Score = 130 bits (328), Expect = 8e-31
Identities = 65/168 (38%), Positives = 94/168 (55%), Gaps = 3/168 (1%)
Query: 44 VVLPREIDLNEWLASNTTTFFHHINLQYSTISEFCTGETCQTMAVC-NTQYYWYDERG-- 100
V LP DLN+W+A + FF+ +NL Y TIS+ CT ++C M+ +Y W DE
Sbjct: 49 VQLPPGEDLNDWVAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGPKYEYRWQDEHKFR 108
Query: 101 KKVKCTAPQYVDFVMSSVQKLVTDEDVFPTKYGREFPSSFESLVRKICRHLFHVLAHIYW 160
K +AP+Y+D +M ++ + +ED+FPT G FP +F VRKI LF V H+Y
Sbjct: 109 KPTALSAPRYMDLLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRKILSRLFRVFVHVYI 168
Query: 161 AHFKETLALELHGHLNTLYVHFILFAREFNLLDPKETAIMDDLTEVLC 208
HF + H+NT Y HF F +EF L+D KE + ++T +C
Sbjct: 169 HHFDRIAQMGSEAHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTARMC 216
>gi|41350330 MOB1, Mps One Binder kinase activator-like 2B [Homo
sapiens]
Length = 216
Score = 126 bits (316), Expect = 2e-29
Identities = 64/171 (37%), Positives = 92/171 (53%), Gaps = 3/171 (1%)
Query: 41 KELVVLPREIDLNEWLASNTTTFFHHINLQYSTISEFCTGETCQTMAVC-NTQYYWYDER 99
K V LP D N+W+A + FF+ INL Y TI EFCT TC M+ +Y W D+
Sbjct: 45 KAAVQLPSGEDQNDWVAVHVVDFFNRINLIYGTICEFCTERTCPVMSGGPKYEYRWQDDL 104
Query: 100 G--KKVKCTAPQYVDFVMSSVQKLVTDEDVFPTKYGREFPSSFESLVRKICRHLFHVLAH 157
K APQY++ +M ++ + +E++FPT G FP +F + +KI LF V H
Sbjct: 105 KYKKPTALPAPQYMNLLMDWIEVQINNEEIFPTCVGVPFPKNFLQICKKILCRLFRVFVH 164
Query: 158 IYWAHFKETLALELHGHLNTLYVHFILFAREFNLLDPKETAIMDDLTEVLC 208
+Y HF + + H+NT Y HF F E NL+D KE + ++T +C
Sbjct: 165 VYIHHFDRVIVMGAEAHVNTCYKHFYYFVTEMNLIDRKELEPLKEMTSRMC 215
>gi|155030224 Mps One Binder kinase activator-like 3 isoform 3 [Homo
sapiens]
Length = 204
Score = 36.2 bits (82), Expect = 0.025
Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 6/167 (3%)
Query: 47 PREIDLNEWLASNTTTFFHHINLQYSTISEFCTGETCQTMAVCNTQYYWYDERGKKVKCT 106
P D W + F +N + C +TC M + +C
Sbjct: 40 PEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCAAHKTPKECP 99
Query: 107 APQYVDFVMSSVQKLVTDEDVFPTKYGREFPSSFESLVRKICRHLFHVLAHIYWAHFKET 166
A Y + L+ FP++ S + + +CR ++ + +H Y+ H +
Sbjct: 100 AIDYTRHTLDGAACLLNSNKYFPSRVS--IKESSVAKLGSVCRRIYRIFSHAYFHHRQ-- 155
Query: 167 LALELHGHLNTLYVHFILFAREFNLLDPKETAIMDDLTEVLCSGAGG 213
+ + + L F F ++NL+ K+ I+ L E + + G
Sbjct: 156 -IFDEYENETFLCHRFTKFVMKYNLMS-KDNLIVPILEEEVQNSVSG 200
>gi|41349451 Mps One Binder kinase activator-like 3 isoform 2 [Homo
sapiens]
Length = 193
Score = 36.2 bits (82), Expect = 0.025
Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 6/167 (3%)
Query: 47 PREIDLNEWLASNTTTFFHHINLQYSTISEFCTGETCQTMAVCNTQYYWYDERGKKVKCT 106
P D W + F +N + C +TC M + +C
Sbjct: 29 PEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCAAHKTPKECP 88
Query: 107 APQYVDFVMSSVQKLVTDEDVFPTKYGREFPSSFESLVRKICRHLFHVLAHIYWAHFKET 166
A Y + L+ FP++ S + + +CR ++ + +H Y+ H +
Sbjct: 89 AIDYTRHTLDGAACLLNSNKYFPSRVS--IKESSVAKLGSVCRRIYRIFSHAYFHHRQ-- 144
Query: 167 LALELHGHLNTLYVHFILFAREFNLLDPKETAIMDDLTEVLCSGAGG 213
+ + + L F F ++NL+ K+ I+ L E + + G
Sbjct: 145 -IFDEYENETFLCHRFTKFVMKYNLMS-KDNLIVPILEEEVQNSVSG 189
>gi|41349449 Mps One Binder kinase activator-like 3 isoform 1 [Homo
sapiens]
Length = 225
Score = 36.2 bits (82), Expect = 0.025
Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 6/167 (3%)
Query: 47 PREIDLNEWLASNTTTFFHHINLQYSTISEFCTGETCQTMAVCNTQYYWYDERGKKVKCT 106
P D W + F +N + C +TC M + +C
Sbjct: 61 PEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCAAHKTPKECP 120
Query: 107 APQYVDFVMSSVQKLVTDEDVFPTKYGREFPSSFESLVRKICRHLFHVLAHIYWAHFKET 166
A Y + L+ FP++ S + + +CR ++ + +H Y+ H +
Sbjct: 121 AIDYTRHTLDGAACLLNSNKYFPSRVS--IKESSVAKLGSVCRRIYRIFSHAYFHHRQ-- 176
Query: 167 LALELHGHLNTLYVHFILFAREFNLLDPKETAIMDDLTEVLCSGAGG 213
+ + + L F F ++NL+ K+ I+ L E + + G
Sbjct: 177 -IFDEYENETFLCHRFTKFVMKYNLMS-KDNLIVPILEEEVQNSVSG 221
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 33.1 bits (74), Expect = 0.22
Identities = 15/21 (71%), Positives = 15/21 (71%)
Query: 210 GAGGVHSGGSGDGAGSGGPGA 230
G GG SGGSG G GSGG GA
Sbjct: 2293 GGGGGGSGGSGGGGGSGGGGA 2313
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 32.7 bits (73), Expect = 0.28
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 210 GAGGVHSGGSGDGAGSGGPGAQNHVKE 236
GAGG +G GAG+GGPG + +E
Sbjct: 352 GAGGAAAGAGAAGAGAGGPGGRGEYEE 378
Score = 27.7 bits (60), Expect = 9.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 210 GAGGVHSGGSGDGAGSGGPG 229
G GG GG G G GGPG
Sbjct: 640 GGGGPGGGGGGGPGGGGGPG 659
>gi|188497630 hypothetical protein LOC55571 [Homo sapiens]
Length = 510
Score = 32.7 bits (73), Expect = 0.28
Identities = 13/20 (65%), Positives = 15/20 (75%)
Query: 210 GAGGVHSGGSGDGAGSGGPG 229
G+GG G SG G+GSGGPG
Sbjct: 36 GSGGGRGGASGPGSGSGGPG 55
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 32.3 bits (72), Expect = 0.37
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 209 SGAGGVHSGGSGDGAGSGGPGA 230
SGAGG GG G G+GSGG G+
Sbjct: 801 SGAGGGGGGGGGGGSGSGGGGS 822
>gi|134288906 tripartite motif-containing 67 [Homo sapiens]
Length = 783
Score = 32.3 bits (72), Expect = 0.37
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 208 CSGAGGVHSGGSGDGAGSGGPGA 230
C GAGG +GG G GAG GG A
Sbjct: 77 CGGAGGSAAGGLGGGAGGGGDHA 99
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 31.2 bits (69), Expect = 0.82
Identities = 12/18 (66%), Positives = 14/18 (77%)
Query: 210 GAGGVHSGGSGDGAGSGG 227
G+GG + GGSG G GSGG
Sbjct: 515 GSGGSYGGGSGSGGGSGG 532
Score = 30.8 bits (68), Expect = 1.1
Identities = 12/18 (66%), Positives = 14/18 (77%)
Query: 210 GAGGVHSGGSGDGAGSGG 227
G+GG + GGSG G GSGG
Sbjct: 553 GSGGNYGGGSGSGGGSGG 570
Score = 29.3 bits (64), Expect = 3.1
Identities = 14/20 (70%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
Query: 210 GAGGVHSGGSGDG--AGSGG 227
G+GG HSGGSG G GSGG
Sbjct: 537 GSGGGHSGGSGGGHSGGSGG 556
Score = 29.3 bits (64), Expect = 3.1
Identities = 12/18 (66%), Positives = 13/18 (72%)
Query: 210 GAGGVHSGGSGDGAGSGG 227
G+GG H GGSG G SGG
Sbjct: 581 GSGGSHGGGSGFGGESGG 598
Score = 28.9 bits (63), Expect = 4.1
Identities = 14/22 (63%), Positives = 16/22 (72%), Gaps = 4/22 (18%)
Query: 210 GAGGVHSGGS----GDGAGSGG 227
G+GG HSGGS G G+GSGG
Sbjct: 545 GSGGGHSGGSGGNYGGGSGSGG 566
Score = 27.7 bits (60), Expect = 9.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 210 GAGGVHSGGSGDGAGSGG 227
G+GG + GGSG GSGG
Sbjct: 501 GSGGGYGGGSGSRGGSGG 518
Score = 27.7 bits (60), Expect = 9.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 209 SGAGGVHSGGSGDGAGSGGPGAQNH 233
SG+GG GG G G+GS G +H
Sbjct: 562 SGSGGGSGGGYGGGSGSRGGSGGSH 586
>gi|125987596 sodium bicarbonate transporter 4 isoform a [Homo
sapiens]
Length = 1137
Score = 31.2 bits (69), Expect = 0.82
Identities = 14/20 (70%), Positives = 14/20 (70%)
Query: 210 GAGGVHSGGSGDGAGSGGPG 229
G GG GGSG GAGSGG G
Sbjct: 449 GNGGGGGGGSGGGAGSGGAG 468
>gi|19743827 sodium bicarbonate transporter 4 isoform c [Homo
sapiens]
Length = 1121
Score = 31.2 bits (69), Expect = 0.82
Identities = 14/20 (70%), Positives = 14/20 (70%)
Query: 210 GAGGVHSGGSGDGAGSGGPG 229
G GG GGSG GAGSGG G
Sbjct: 449 GNGGGGGGGSGGGAGSGGAG 468
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 31.2 bits (69), Expect = 0.82
Identities = 13/20 (65%), Positives = 13/20 (65%)
Query: 210 GAGGVHSGGSGDGAGSGGPG 229
GAGG GGSG G G GG G
Sbjct: 484 GAGGGSGGGSGSGGGGGGAG 503
Score = 29.6 bits (65), Expect = 2.4
Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Query: 209 SGAGGVHSGGSGDGAGSGGPG 229
SG+GG GGSG G+GSGG G
Sbjct: 480 SGSGGA-GGGSGGGSGSGGGG 499
Score = 28.5 bits (62), Expect = 5.3
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 212 GGVHSGGSGDGAGSGGPGA 230
GG SGG G GAG GG G+
Sbjct: 491 GGSGSGGGGGGAGGGGGGS 509
>gi|140161500 ankyrin repeat and sterile alpha motif domain
containing 1 [Homo sapiens]
Length = 1134
Score = 31.2 bits (69), Expect = 0.82
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 210 GAGGVHSGGSGDGAGSGGPGAQNH 233
G GG GG G G G GG G+ +H
Sbjct: 36 GGGGSGGGGGGSGGGGGGLGSSSH 59
Score = 28.9 bits (63), Expect = 4.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 210 GAGGVHSGGSGDGAGSGGPG 229
G GG SGG G G+G GG G
Sbjct: 34 GGGGGGSGGGGGGSGGGGGG 53
Score = 28.1 bits (61), Expect = 6.9
Identities = 13/23 (56%), Positives = 13/23 (56%)
Query: 207 LCSGAGGVHSGGSGDGAGSGGPG 229
L SG GG GGSG G G G G
Sbjct: 28 LSSGFGGGGGGGSGGGGGGSGGG 50
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 31.2 bits (69), Expect = 0.82
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 209 SGAGGVHSGGSGDGAGSGGPGAQNH 233
+G GG SGG G G G GG G H
Sbjct: 3506 TGGGGGGSGGGGGGGGGGGGGGSYH 3530
Score = 28.1 bits (61), Expect = 6.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 199 IMDDLTEVLCSGAGGVHSGGSGDGAGSGGPGA 230
+ + + V G GG GG G G G GG G+
Sbjct: 3497 LQEMVLHVPTGGGGGGSGGGGGGGGGGGGGGS 3528
>gi|88759346 GATA zinc finger domain containing 1 [Homo sapiens]
Length = 269
Score = 31.2 bits (69), Expect = 0.82
Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Query: 208 CSGAGGVHSGGSGDGA--GSGGPG 229
C+G GG SGG+G GA G+GG G
Sbjct: 33 CTGRGGAGSGGAGSGAAGGTGGSG 56
Score = 27.7 bits (60), Expect = 9.0
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 8/33 (24%)
Query: 205 EVLC--------SGAGGVHSGGSGDGAGSGGPG 229
E+LC +G+GG SG +G GSGG G
Sbjct: 27 EILCHHCTGRGGAGSGGAGSGAAGGTGGSGGGG 59
>gi|205360934 fibronectin type III domain containing 3B [Homo
sapiens]
Length = 1204
Score = 31.2 bits (69), Expect = 0.82
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 190 NLLDPKETAIMDDLTEVLCSGAGGVHSGGSGDGAGSGGPG 229
N L+ ++I + +G G HSGGSG G GPG
Sbjct: 204 NRLNSPPSSIYKSSCTTVYNGYGKGHSGGSGGGGSGSGPG 243
>gi|205360932 fibronectin type III domain containing 3B [Homo
sapiens]
Length = 1204
Score = 31.2 bits (69), Expect = 0.82
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 190 NLLDPKETAIMDDLTEVLCSGAGGVHSGGSGDGAGSGGPG 229
N L+ ++I + +G G HSGGSG G GPG
Sbjct: 204 NRLNSPPSSIYKSSCTTVYNGYGKGHSGGSGGGGSGSGPG 243
>gi|4502565 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 31.2 bits (69), Expect = 0.82
Identities = 14/23 (60%), Positives = 14/23 (60%)
Query: 207 LCSGAGGVHSGGSGDGAGSGGPG 229
L SGAGG GG G G G GG G
Sbjct: 32 LISGAGGGGGGGGGGGGGGGGGG 54
>gi|51599151 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 31.2 bits (69), Expect = 0.82
Identities = 14/23 (60%), Positives = 14/23 (60%)
Query: 207 LCSGAGGVHSGGSGDGAGSGGPG 229
L SGAGG GG G G G GG G
Sbjct: 32 LISGAGGGGGGGGGGGGGGGGGG 54
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 31.2 bits (69), Expect = 0.82
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 210 GAGGVHSGGSGDGAGSGGPGA 230
G GG GG G GAG+GG GA
Sbjct: 258 GGGGSGGGGGGGGAGAGGAGA 278
Score = 30.4 bits (67), Expect = 1.4
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 210 GAGGVHSGGSGDGAGSGGPGA 230
G GG GGSG G G GG GA
Sbjct: 253 GGGGGGGGGSGGGGGGGGAGA 273
Score = 30.0 bits (66), Expect = 1.8
Identities = 13/20 (65%), Positives = 13/20 (65%)
Query: 210 GAGGVHSGGSGDGAGSGGPG 229
GAGG GG G G GSGG G
Sbjct: 247 GAGGGGGGGGGGGGGSGGGG 266
Score = 28.9 bits (63), Expect = 4.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Query: 210 GAGGVHSGGSGDGAGSGGPGA 230
G GG GG G G G GG GA
Sbjct: 251 GGGGGGGGGGGSGGGGGGGGA 271
Score = 28.1 bits (61), Expect = 6.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 210 GAGGVHSGGSGDGAGSGGPGA 230
G GG SGG G G G+G GA
Sbjct: 256 GGGGGGSGGGGGGGGAGAGGA 276
Score = 27.7 bits (60), Expect = 9.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 209 SGAGGVHSGGSGDGAGSGGPG 229
+G GG GG G G+G GG G
Sbjct: 248 AGGGGGGGGGGGGGSGGGGGG 268
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 31.2 bits (69), Expect = 0.82
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 210 GAGGVHSGGSGDGAGSGGPGA 230
G GG GG G GAG+GG GA
Sbjct: 258 GGGGSGGGGGGGGAGAGGAGA 278
Score = 30.4 bits (67), Expect = 1.4
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 210 GAGGVHSGGSGDGAGSGGPGA 230
G GG GGSG G G GG GA
Sbjct: 253 GGGGGGGGGSGGGGGGGGAGA 273
Score = 30.0 bits (66), Expect = 1.8
Identities = 13/20 (65%), Positives = 13/20 (65%)
Query: 210 GAGGVHSGGSGDGAGSGGPG 229
GAGG GG G G GSGG G
Sbjct: 247 GAGGGGGGGGGGGGGSGGGG 266
Score = 28.9 bits (63), Expect = 4.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Query: 210 GAGGVHSGGSGDGAGSGGPGA 230
G GG GG G G G GG GA
Sbjct: 251 GGGGGGGGGGGSGGGGGGGGA 271
Score = 28.1 bits (61), Expect = 6.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 210 GAGGVHSGGSGDGAGSGGPGA 230
G GG SGG G G G+G GA
Sbjct: 256 GGGGGGSGGGGGGGGAGAGGA 276
Score = 27.7 bits (60), Expect = 9.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 209 SGAGGVHSGGSGDGAGSGGPG 229
+G GG GG G G+G GG G
Sbjct: 248 AGGGGGGGGGGGGGSGGGGGG 268
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 31.2 bits (69), Expect = 0.82
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 210 GAGGVHSGGSGDGAGSGGPGA 230
G GG GG G GAG+GG GA
Sbjct: 258 GGGGSGGGGGGGGAGAGGAGA 278
Score = 30.4 bits (67), Expect = 1.4
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 210 GAGGVHSGGSGDGAGSGGPGA 230
G GG GGSG G G GG GA
Sbjct: 253 GGGGGGGGGSGGGGGGGGAGA 273
Score = 30.0 bits (66), Expect = 1.8
Identities = 13/20 (65%), Positives = 13/20 (65%)
Query: 210 GAGGVHSGGSGDGAGSGGPG 229
GAGG GG G G GSGG G
Sbjct: 247 GAGGGGGGGGGGGGGSGGGG 266
Score = 28.9 bits (63), Expect = 4.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Query: 210 GAGGVHSGGSGDGAGSGGPGA 230
G GG GG G G G GG GA
Sbjct: 251 GGGGGGGGGGGSGGGGGGGGA 271
Score = 28.1 bits (61), Expect = 6.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 210 GAGGVHSGGSGDGAGSGGPGA 230
G GG SGG G G G+G GA
Sbjct: 256 GGGGGGSGGGGGGGGAGAGGA 276
Score = 27.7 bits (60), Expect = 9.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 209 SGAGGVHSGGSGDGAGSGGPG 229
+G GG GG G G+G GG G
Sbjct: 248 AGGGGGGGGGGGGGSGGGGGG 268
>gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 30.8 bits (68), Expect = 1.1
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 192 LDPKETAIMDDLTEVLCSGAG-GVHSGGSGDGAGSGGPGAQ 231
L P++++ D E G G G +GG G G GSGG AQ
Sbjct: 11 LQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSAQ 51
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,979,733
Number of Sequences: 37866
Number of extensions: 440005
Number of successful extensions: 3957
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3254
Number of HSP's gapped (non-prelim): 550
length of query: 237
length of database: 18,247,518
effective HSP length: 99
effective length of query: 138
effective length of database: 14,498,784
effective search space: 2000832192
effective search space used: 2000832192
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.