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Search of human proteins with 34304368
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|34304368 dystrobrevin binding protein 1 isoform b [Homo
sapiens]
(303 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|34304368 dystrobrevin binding protein 1 isoform b [Homo sapiens] 599 e-171
gi|19549327 dystrobrevin binding protein 1 isoform a [Homo sapiens] 531 e-151
gi|34304370 dystrobrevin binding protein 1 isoform c [Homo sapiens] 376 e-104
gi|115299762 SCF apoptosis response protein 1 isoform a [Homo sa... 80 3e-15
gi|115299750 SCF apoptosis response protein 1 isoform a [Homo sa... 80 3e-15
gi|115299745 SCF apoptosis response protein 1 isoform a [Homo sa... 80 3e-15
gi|115299756 SCF apoptosis response protein 1 isoform b [Homo sa... 79 5e-15
gi|115299754 SCF apoptosis response protein 1 isoform b [Homo sa... 79 5e-15
gi|115299760 SCF apoptosis response protein 1 isoform b [Homo sa... 79 5e-15
gi|110815838 dysbindin (dystrobrevin binding protein 1) domain c... 57 2e-08
gi|110815842 dysbindin (dystrobrevin binding protein 1) domain c... 57 2e-08
gi|34577114 cytomatrix protein p110 [Homo sapiens] 52 6e-07
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 49 7e-06
gi|44890059 involucrin [Homo sapiens] 49 7e-06
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 48 9e-06
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 48 9e-06
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 47 3e-05
gi|38570058 hypothetical protein LOC80129 [Homo sapiens] 44 1e-04
gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 44 1e-04
gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 44 1e-04
gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 44 1e-04
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 44 1e-04
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 44 2e-04
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 44 2e-04
gi|32698688 citron [Homo sapiens] 44 2e-04
gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens] 44 2e-04
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 42 5e-04
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 42 5e-04
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 42 5e-04
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 42 5e-04
>gi|34304368 dystrobrevin binding protein 1 isoform b [Homo sapiens]
Length = 303
Score = 599 bits (1544), Expect = e-171
Identities = 303/303 (100%), Positives = 303/303 (100%)
Query: 1 MLETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWA 60
MLETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWA
Sbjct: 1 MLETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWA 60
Query: 61 ALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLTH 120
ALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLTH
Sbjct: 61 ALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLTH 120
Query: 121 LEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKELETFKAELDAEHAQK 180
LEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKELETFKAELDAEHAQK
Sbjct: 121 LEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKELETFKAELDAEHAQK 180
Query: 181 VLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQ 240
VLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQ
Sbjct: 181 VLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQ 240
Query: 241 MDLMDISDQEALDVFLNSGGEENTVLSPALGRVDKLALAEPGQYRCHSPPKVRRENHLPV 300
MDLMDISDQEALDVFLNSGGEENTVLSPALGRVDKLALAEPGQYRCHSPPKVRRENHLPV
Sbjct: 241 MDLMDISDQEALDVFLNSGGEENTVLSPALGRVDKLALAEPGQYRCHSPPKVRRENHLPV 300
Query: 301 TYA 303
TYA
Sbjct: 301 TYA 303
>gi|19549327 dystrobrevin binding protein 1 isoform a [Homo sapiens]
Length = 351
Score = 531 bits (1369), Expect = e-151
Identities = 271/271 (100%), Positives = 271/271 (100%)
Query: 1 MLETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWA 60
MLETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWA
Sbjct: 1 MLETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWA 60
Query: 61 ALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLTH 120
ALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLTH
Sbjct: 61 ALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLTH 120
Query: 121 LEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKELETFKAELDAEHAQK 180
LEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKELETFKAELDAEHAQK
Sbjct: 121 LEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKELETFKAELDAEHAQK 180
Query: 181 VLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQ 240
VLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQ
Sbjct: 181 VLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQ 240
Query: 241 MDLMDISDQEALDVFLNSGGEENTVLSPALG 271
MDLMDISDQEALDVFLNSGGEENTVLSPALG
Sbjct: 241 MDLMDISDQEALDVFLNSGGEENTVLSPALG 271
>gi|34304370 dystrobrevin binding protein 1 isoform c [Homo sapiens]
Length = 270
Score = 376 bits (965), Expect = e-104
Identities = 190/190 (100%), Positives = 190/190 (100%)
Query: 82 MLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLTHLEASFEEVENNLLHLEDLCGQ 141
MLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLTHLEASFEEVENNLLHLEDLCGQ
Sbjct: 1 MLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLTHLEASFEEVENNLLHLEDLCGQ 60
Query: 142 CELERCKHMQSQQLENYKKNKRKELETFKAELDAEHAQKVLEMEHTQQMKLKERQKFFEE 201
CELERCKHMQSQQLENYKKNKRKELETFKAELDAEHAQKVLEMEHTQQMKLKERQKFFEE
Sbjct: 61 CELERCKHMQSQQLENYKKNKRKELETFKAELDAEHAQKVLEMEHTQQMKLKERQKFFEE 120
Query: 202 AFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQMDLMDISDQEALDVFLNSGGE 261
AFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQMDLMDISDQEALDVFLNSGGE
Sbjct: 121 AFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQMDLMDISDQEALDVFLNSGGE 180
Query: 262 ENTVLSPALG 271
ENTVLSPALG
Sbjct: 181 ENTVLSPALG 190
>gi|115299762 SCF apoptosis response protein 1 isoform a [Homo
sapiens]
Length = 161
Score = 79.7 bits (195), Expect = 3e-15
Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 188 QQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQMDLMDIS 247
QQ++L+ERQKFFE+ Q + E +L + +R PIGS+SSMEVNVD LEQ++L+D+
Sbjct: 12 QQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTLEQVELIDLG 71
Query: 248 DQEALDVFLNSGGEENTVLSPAL-GRVDKLALAEPGQYRCHS 288
D +A DVFL T S + +++L+L P R S
Sbjct: 72 DPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTS 113
>gi|115299750 SCF apoptosis response protein 1 isoform a [Homo
sapiens]
Length = 161
Score = 79.7 bits (195), Expect = 3e-15
Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 188 QQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQMDLMDIS 247
QQ++L+ERQKFFE+ Q + E +L + +R PIGS+SSMEVNVD LEQ++L+D+
Sbjct: 12 QQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTLEQVELIDLG 71
Query: 248 DQEALDVFLNSGGEENTVLSPAL-GRVDKLALAEPGQYRCHS 288
D +A DVFL T S + +++L+L P R S
Sbjct: 72 DPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTS 113
>gi|115299745 SCF apoptosis response protein 1 isoform a [Homo
sapiens]
Length = 161
Score = 79.7 bits (195), Expect = 3e-15
Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 188 QQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQMDLMDIS 247
QQ++L+ERQKFFE+ Q + E +L + +R PIGS+SSMEVNVD LEQ++L+D+
Sbjct: 12 QQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTLEQVELIDLG 71
Query: 248 DQEALDVFLNSGGEENTVLSPAL-GRVDKLALAEPGQYRCHS 288
D +A DVFL T S + +++L+L P R S
Sbjct: 72 DPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTS 113
>gi|115299756 SCF apoptosis response protein 1 isoform b [Homo
sapiens]
Length = 112
Score = 79.0 bits (193), Expect = 5e-15
Identities = 37/69 (53%), Positives = 51/69 (73%)
Query: 188 QQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQMDLMDIS 247
QQ++L+ERQKFFE+ Q + E +L + +R PIGS+SSMEVNVD LEQ++L+D+
Sbjct: 12 QQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTLEQVELIDLG 71
Query: 248 DQEALDVFL 256
D +A DVFL
Sbjct: 72 DPDAADVFL 80
>gi|115299754 SCF apoptosis response protein 1 isoform b [Homo
sapiens]
Length = 112
Score = 79.0 bits (193), Expect = 5e-15
Identities = 37/69 (53%), Positives = 51/69 (73%)
Query: 188 QQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQMDLMDIS 247
QQ++L+ERQKFFE+ Q + E +L + +R PIGS+SSMEVNVD LEQ++L+D+
Sbjct: 12 QQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTLEQVELIDLG 71
Query: 248 DQEALDVFL 256
D +A DVFL
Sbjct: 72 DPDAADVFL 80
>gi|115299760 SCF apoptosis response protein 1 isoform b [Homo
sapiens]
Length = 112
Score = 79.0 bits (193), Expect = 5e-15
Identities = 37/69 (53%), Positives = 51/69 (73%)
Query: 188 QQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQMDLMDIS 247
QQ++L+ERQKFFE+ Q + E +L + +R PIGS+SSMEVNVD LEQ++L+D+
Sbjct: 12 QQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTLEQVELIDLG 71
Query: 248 DQEALDVFL 256
D +A DVFL
Sbjct: 72 DPDAADVFL 80
>gi|110815838 dysbindin (dystrobrevin binding protein 1) domain
containing 1 isoform 1 [Homo sapiens]
Length = 158
Score = 57.0 bits (136), Expect = 2e-08
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 214 GYLQIAERREPIGSMSSMEVNVDMLEQMDLMDISDQEALDVFLNSGGEENTVLSPA 269
G LQ+ ERR+P+ S+SS+EV+ D+L+ +L D+SDQE +VF +S E SPA
Sbjct: 51 GLLQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDDENLNTESPA 106
>gi|110815842 dysbindin (dystrobrevin binding protein 1) domain
containing 1 isoform 2 [Homo sapiens]
Length = 178
Score = 57.0 bits (136), Expect = 2e-08
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 214 GYLQIAERREPIGSMSSMEVNVDMLEQMDLMDISDQEALDVFLNSGGEENTVLSPA 269
G LQ+ ERR+P+ S+SS+EV+ D+L+ +L D+SDQE +VF +S E SPA
Sbjct: 71 GLLQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDDENLNTESPA 126
>gi|34577114 cytomatrix protein p110 [Homo sapiens]
Length = 957
Score = 52.0 bits (123), Expect = 6e-07
Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 52 LSRYEDTWAALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADL 111
L+ E + L A ASAG DS++ L E+KK +L+ QL++ ++
Sbjct: 636 LTEKESSLIDLKEHASSLASAGLKRDSKLKSLEIAIEQKKEECSKLEAQLKKAH----NI 691
Query: 112 ESMTANLTHLEASFEEVENNLLHLEDLCGQCELERCKHMQS-QQLENYKKNKRK---ELE 167
E + ++++ + D CG+ + E + ++ +++EN K +K K ELE
Sbjct: 692 EDDSRMNPEFADQIKQLDKEASYYRDECGKAQAEVDRLLEILKEVENEKNDKDKKIAELE 751
Query: 168 TFKAELDAEHAQKVLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAE 220
+ + +KV ++H QQ++ K+ + EE +++ ++ +LQI E
Sbjct: 752 SLTLRHMKDQNKKVANLKHNQQLEKKKNAQLLEEVRRREDSMADNSQHLQIEE 804
Score = 38.1 bits (87), Expect = 0.010
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 94 LVELQEQLQQLPALIADLESMT-----------ANLTHLEASFEEVENNLLHLEDLCGQC 142
L E++ + IA+LES+T ANL H + ++ LL
Sbjct: 733 LKEVENEKNDKDKKIAELESLTLRHMKDQNKKVANLKHNQQLEKKKNAQLLEEVRRREDS 792
Query: 143 ELERCKHMQSQQLENYKKNKRKELETFKAELDAEHAQKVLEME-HTQQMKLKERQKFFEE 201
+ +H+Q ++L N + R+EL+ KA L A Q + E E H +++ ER+K EE
Sbjct: 793 MADNSQHLQIEELMNALEKTRQELDATKARL-ASTQQSLAEKEAHLANLRI-ERRKQLEE 850
Query: 202 AFQQDMEQYLS 212
+ E L+
Sbjct: 851 ILEMKQEALLA 861
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 48.5 bits (114), Expect = 7e-06
Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 18/136 (13%)
Query: 65 RAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLTHLEAS 124
R K A+ L + E + EK ++LQEQLQ L A+ E + A LT +
Sbjct: 858 REKQLAAENRLTEMETLQSQLMAEK-----LQLQEQLQAETELCAEAEELRARLTAKKQE 912
Query: 125 FEEVENNL-LHLEDLCGQCELERCKHMQSQQLENYKKNKRKELETFKAELDAEH-AQKVL 182
EE+ ++L +E+ E ERC+H+Q++ KK ++ ++ + +L+ E A++ L
Sbjct: 913 LEEICHDLEARVEE-----EEERCQHLQAE-----KKKMQQNIQELEEQLEEEESARQKL 962
Query: 183 EMEH-TQQMKLKERQK 197
++E T + KLK+ ++
Sbjct: 963 QLEKVTTEAKLKKLEE 978
Score = 40.4 bits (93), Expect = 0.002
Identities = 52/219 (23%), Positives = 99/219 (45%), Gaps = 33/219 (15%)
Query: 10 LSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWAAL---HRRA 66
L V+ D +GL + SD S+ +K L K + LE S+ +DT L +R+
Sbjct: 1278 LQVELDNVTGLLSQSD-SKSSK----------LTKDFSALE--SQLQDTQELLQEENRQK 1324
Query: 67 KDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLTHLEASFE 126
++ + V+ E E+++ + L++Q+ L A +AD++ + + E
Sbjct: 1325 LSLSTKLKQVEDEKNSFREQLEEEEEAKHNLEKQIATLHAQVADMKKKMEDSVGCLETAE 1384
Query: 127 EVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKELETFKAELDAEHAQKVLEMEH 186
EV+ L Q +LE +++ Y K LE K L E +++++H
Sbjct: 1385 EVKRKL--------QKDLEGLSQRHEEKVAAYDK-----LEKTKTRLQQELDDLLVDLDH 1431
Query: 187 TQQ--MKLKERQKFFEEAFQQDMEQYLSTGYLQIAERRE 223
+Q L+++QK F++ + E+ +S Y + +R E
Sbjct: 1432 QRQSACNLEKKQKKFDQLLAE--EKTISAKYAEERDRAE 1468
Score = 35.4 bits (80), Expect = 0.063
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 10/179 (5%)
Query: 74 ELVDSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADLES---MTANLTHLEASFEEVEN 130
+L+ E + + + E++ + E +E+ + +L LE A L L F
Sbjct: 1448 QLLAEEKTISAKYAEERDRAEAEAREKETKALSLARALEEAMEQKAELERLNKQFRTEME 1507
Query: 131 NLLHLEDLCGQC--ELERCKHMQSQQLENYKKNKRKELETFKAELDAEHAQKVLEMEHTQ 188
+L+ +D G+ ELE+ K QQ+E K +LE + EL A K+ + Q
Sbjct: 1508 DLMSSKDDVGKSVHELEKSKRALEQQVEEMK----TQLEELEDELQATEDAKLRLEVNLQ 1563
Query: 189 QMKLK-ERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQMDLMDI 246
MK + ER + ++ ++ L ++ E SM V +MDL D+
Sbjct: 1564 AMKAQFERDLQGRDEQSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDL 1622
Score = 30.8 bits (68), Expect = 1.5
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 21/126 (16%)
Query: 88 EKKKTSLVELQEQLQQLPALIADLESMTANLTHLEASFEEVENNLLHLE----DLCGQ-C 142
E+K SL +L+ + + A+I DLE L E +E+E LE DL Q
Sbjct: 1012 EEKSKSLAKLKNKHE---AMITDLEE---RLRREEKQRQELEKTRRKLEGDSTDLSDQIA 1065
Query: 143 ELERCKHMQSQQLENYKKNKRKELETFKAELDAEHAQKVLEMEHTQQMKLKERQKFFEEA 202
EL+ Q +L+ K +EL+ A ++ E AQK + ++ K++E + E
Sbjct: 1066 ELQA----QIAELKMQLAKKEEELQAALARVEEEAAQKNMALK-----KIRELESQISE- 1115
Query: 203 FQQDME 208
Q+D+E
Sbjct: 1116 LQEDLE 1121
Score = 28.9 bits (63), Expect = 5.9
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 118 LTHLEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKELETFKAELDAEH 177
LT +E ++ L L++ Q E E C ++++L K++ELE +L+A
Sbjct: 868 LTEMETLQSQLMAEKLQLQEQL-QAETELCA--EAEELRARLTAKKQELEEICHDLEARV 924
Query: 178 AQKVLEMEHTQQMKLKERQKFFEEAFQQDMEQ 209
++ +H Q K K +Q E Q + E+
Sbjct: 925 EEEEERCQHLQAEKKKMQQNIQELEEQLEEEE 956
>gi|44890059 involucrin [Homo sapiens]
Length = 585
Score = 48.5 bits (114), Expect = 7e-06
Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 16/150 (10%)
Query: 94 LVELQEQLQQLPALIADLESMTANLTHLEASFEEVENNLLHLEDLCGQCELERCKHMQSQ 153
LV+ + QL+Q + LE L HL EE E L HLE GQ E+ + Q +
Sbjct: 406 LVQQEGQLEQQERQVEHLEQQVGQLKHL----EEQEGQLKHLEQQQGQLEVPEQQVGQPK 461
Query: 154 QLENYKKNKR--KELETFKAELDAEHAQKVLEMEHTQQMK-LKERQKFFEEAFQQDMEQY 210
LE +K ++ E L+ + AQ L + Q K L++++K E QQD
Sbjct: 462 NLEQEEKQLELPEQQEGQVKHLEKQEAQLELPEQQVGQPKHLEQQEKHLEHPEQQD---- 517
Query: 211 LSTGYLQIAERREPIGSMSSMEVNVDMLEQ 240
G L+ E++E G + +E LEQ
Sbjct: 518 ---GQLKHLEQQE--GQLKDLEQQKGQLEQ 542
Score = 35.8 bits (81), Expect = 0.048
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 23/160 (14%)
Query: 88 EKKKTSLVELQEQ------LQQLPALIADLESMTANLTHLEASFEEVENNLLHLEDLCGQ 141
E++ L L++Q L+Q + LE L HLE + E L HLE GQ
Sbjct: 307 EQQMGQLKHLEQQEGQPKHLEQQEGQLEQLEEQEGQLKHLE----QQEGQLEHLEHQEGQ 362
Query: 142 CELERCKHMQSQQLENYKKNKRKELETFKAELDAEHAQKVLEMEH--TQQMKLKERQKFF 199
L + +Q +QLE ++ + K LE + +L Q+ +++H Q+ +L+++++
Sbjct: 363 LGLPEQQVLQLKQLEK-QQGQPKHLEEEEGQL-KHLVQQEGQLKHLVQQEGQLEQQERQV 420
Query: 200 EEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLE 239
E QQ G L+ E +E G + +E LE
Sbjct: 421 EHLEQQ-------VGQLKHLEEQE--GQLKHLEQQQGQLE 451
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 48.1 bits (113), Expect = 9e-06
Identities = 45/177 (25%), Positives = 89/177 (50%), Gaps = 14/177 (7%)
Query: 52 LSRYEDTWAALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADL 111
LS E + L A AS+G DS + L E+KK ++++ QL++ A A L
Sbjct: 668 LSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKK--AHEAAL 725
Query: 112 ES-----MTANLTHLEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKEL 166
E+ M+ + HLE ++ E Q E++R + +++EN K +K K++
Sbjct: 726 EARASPEMSDRIQHLEREITRYKD-----ESSKAQAEVDRLLEI-LKEVENEKNDKDKKI 779
Query: 167 ETFKAELDAEHAQKVLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERRE 223
+ ++ ++ +KV ++H +Q++ K+ + EEA +++ S+ LQ + R++
Sbjct: 780 AELERQVKDQN-KKVANLKHKEQVEKKKSAQMLEEARRREDNLNDSSQQLQDSLRKK 835
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 48.1 bits (113), Expect = 9e-06
Identities = 45/177 (25%), Positives = 89/177 (50%), Gaps = 14/177 (7%)
Query: 52 LSRYEDTWAALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADL 111
LS E + L A AS+G DS + L E+KK ++++ QL++ A A L
Sbjct: 640 LSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKK--AHEAAL 697
Query: 112 ES-----MTANLTHLEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKEL 166
E+ M+ + HLE ++ E Q E++R + +++EN K +K K++
Sbjct: 698 EARASPEMSDRIQHLEREITRYKD-----ESSKAQAEVDRLLEI-LKEVENEKNDKDKKI 751
Query: 167 ETFKAELDAEHAQKVLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERRE 223
+ ++ ++ +KV ++H +Q++ K+ + EEA +++ S+ LQ + R++
Sbjct: 752 AELERQVKDQN-KKVANLKHKEQVEKKKSAQMLEEARRREDNLNDSSQQLQDSLRKK 807
>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
Length = 1946
Score = 46.6 bits (109), Expect = 3e-05
Identities = 36/147 (24%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
Query: 100 QLQQLPALIADLES-MTANLTHLEASFEEVENNLLH--LEDLCGQCELERCKHMQSQQLE 156
+++++ LI + ++ + L E + E E+ +LH LE L + ELER + +++E
Sbjct: 1537 EMEKVKKLIEEEKTEVQVTLEETEGALERNESKILHFQLELLEAKAELERKLSEKDEEIE 1596
Query: 157 NYKKNKRKELETFKAELDAEHAQK--VLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTG 214
N+++ ++ +++ ++ LD+E + V ++ + L E + A +Q E S G
Sbjct: 1597 NFRRKQQCTIDSLQSSLDSEAKSRIEVTRLKKKMEEDLNEMELQLSCANRQVSEATKSLG 1656
Query: 215 YLQIAERREPIGSMSSMEVNVDMLEQM 241
LQI + + S ++N D+ EQ+
Sbjct: 1657 QLQIQIKDLQMQLDDSTQLNSDLKEQV 1683
Score = 39.3 bits (90), Expect = 0.004
Identities = 50/223 (22%), Positives = 89/223 (39%), Gaps = 32/223 (14%)
Query: 7 ERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPK----YSAGLELLSRYEDTWAAL 62
ER S+ Q L++L +++ + S+ + + Y+ LLS+ + A +
Sbjct: 1687 ERRNSLLQSELEDLRSLQEQTERGRRLSEEELLEATERINLFYTQNTSLLSQKKKLEADV 1746
Query: 63 HRRAKD-------CASAGELVDS---EVVMLSAHWEKKKTSLVELQEQLQQLPALIADLE 112
R K+ C +A E E LS +KK+ ++ L+ + + I DL+
Sbjct: 1747 ARMQKEAEEVVQECQNAEEKAKKAAIEAANLSEELKKKQDTIAHLERTRENMEQTITDLQ 1806
Query: 113 SMTA------------NLTHLEASFEEVENNL-----LHLEDLCGQCELERCKHMQSQQL 155
A + LE+ E+E L E G LERC + Q
Sbjct: 1807 KRLAEAEQMALMGSRKQIQKLESRVRELEGELEGEIRRSAEAQRGARRLERCIKELTYQA 1866
Query: 156 ENYKKN-KRKELETFKAELDAEHAQKVLEMEHTQQMKLKERQK 197
E KKN R + + K +L ++ ++ +E+ TQ + + K
Sbjct: 1867 EEDKKNLSRMQTQMDKLQLKVQNYKQQVEVAETQANQYLSKYK 1909
Score = 34.3 bits (77), Expect = 0.14
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 17/143 (11%)
Query: 62 LHRRAKDCASAGELVDSE---VVMLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANL 118
L ++ + + V++E V L ++ +T + +L+E+L+ A +E A+L
Sbjct: 1092 LRKKELELSQMNSKVENEKGLVAQLQKTVKELQTQIKDLKEKLEAERTTRAKMERERADL 1151
Query: 119 THLEASFEEVENNLLHLEDLCG----QCELERCKHMQSQQLENYKKNKRKELETFKAELD 174
T A E LE++ G Q E+ + + + Q+L + ET A L
Sbjct: 1152 TQDLADLNE------RLEEVGGSSLAQLEITKKQETKFQKLHRDMEEATLHFETTSASLK 1205
Query: 175 AEHAQKVLEM----EHTQQMKLK 193
HA + E+ E+ QQ+K K
Sbjct: 1206 KRHADSLAELEGQVENLQQVKQK 1228
>gi|38570058 hypothetical protein LOC80129 [Homo sapiens]
Length = 715
Score = 44.3 bits (103), Expect = 1e-04
Identities = 61/279 (21%), Positives = 114/279 (40%), Gaps = 59/279 (21%)
Query: 1 MLETLRERLLSVQQDFTSG--------------LKTLSDKSREAKVKSKPRTVPF---LP 43
MLETL+ +L ++ + SG LK L S++ K+ + F L
Sbjct: 400 MLETLQGQLTHLEAELVSGGVLRDNLNFEKQKYLKFLDQLSQKMKLDQMAAELGFDMRLD 459
Query: 44 KYSAGLELLSRYE-----DTWAALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQ 98
A E L R E + H + + E ++S+ + +S +K + +L+
Sbjct: 460 VVLARTEQLVRLESNAVIENKTIAHNLQRKLKTQKERLESKELHMSLLRQK----IAQLE 515
Query: 99 EQLQQLPALIADLESMTANLTHLEASFEEVENNLLHLEDLCGQCE-------------LE 145
E+ Q AL+ + ++ + +L+ E ++ L DL + + LE
Sbjct: 516 EEKQARTALVVERDNAHLTIRNLQKKVERLQKELNTCRDLHTELKAKLADTNELKIKTLE 575
Query: 146 RCKHMQS-----QQLENYKKNKRKELETFKAELDA------EHAQKVLEMEHTQQMKLKE 194
+ K ++ QLE K+ K+L + K+ELD E+ ++ M ++K
Sbjct: 576 QTKAIEDLNKSRDQLEKMKEKAEKKLMSVKSELDTTEHEAKENKERARNMIEVVTSEMKT 635
Query: 195 RQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEV 233
+K EEA +++ Q+A+ RE + M + V
Sbjct: 636 LKKSLEEAEKREK---------QLADFREVVSQMLGLNV 665
>gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 44.3 bits (103), Expect = 1e-04
Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 102 QQLPALIADLESMTANLTHLEASFEEVENNLLHLEDLCGQCE-LERCKHMQSQQLENYKK 160
Q+ L+A+ E++++ +L E + LL + ++ +CE LE+ K M +++ N K
Sbjct: 855 QKFNDLVAEKEAVSSECVNLAKDNEVLHQELLSMRNVQEKCEKLEKDKKMLEEEVLNLKT 914
Query: 161 NKRKE------LETFKAELDAEHAQKVLEMEHTQQMKLKERQKFFEE 201
+ K+ L+ +K+ELD Q++ ++E K E +K E+
Sbjct: 915 HMEKDMVELGKLQEYKSELDERAVQEIEKLEEIHLQKQAEYEKQLEQ 961
Score = 32.0 bits (71), Expect = 0.69
Identities = 39/181 (21%), Positives = 82/181 (45%), Gaps = 36/181 (19%)
Query: 74 ELVDSEVVMLSAHWEKKKTSLVELQEQLQQL-PALIADLESMTANLTHLEASFEE----- 127
++++ EV+ L H EK L +LQE +L + ++E + +A +E+
Sbjct: 903 KMLEEEVLNLKTHMEKDMVELGKLQEYKSELDERAVQEIEKLEEIHLQKQAEYEKQLEQL 962
Query: 128 -------VENNLLHLEDLCGQCELERCKHMQSQ---QLENYKKNKRKELETFKAELDAEH 177
++ L L+D+ +C+ + K + +LE +K E F + A +
Sbjct: 963 NKDNTASLKKKELTLKDV--ECKFSKMKTAYEEVTTELEEFK-------EAFAGAVKANN 1013
Query: 178 AQKVLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREP----IGSMSSMEV 233
+ M+ +++ + + F E +Q M+ +LST + R EP + +++S+E+
Sbjct: 1014 SMSKKLMKSDKKIAVISTKLFTE---KQRMKYFLST----LPTRPEPELPCVENLNSIEL 1066
Query: 234 N 234
N
Sbjct: 1067 N 1067
>gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1002
Score = 44.3 bits (103), Expect = 1e-04
Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 102 QQLPALIADLESMTANLTHLEASFEEVENNLLHLEDLCGQCE-LERCKHMQSQQLENYKK 160
Q+ L+A+ E++++ +L E + LL + ++ +CE LE+ K M +++ N K
Sbjct: 748 QKFNDLVAEKEAVSSECVNLAKDNEVLHQELLSMRNVQEKCEKLEKDKKMLEEEVLNLKT 807
Query: 161 NKRKE------LETFKAELDAEHAQKVLEMEHTQQMKLKERQKFFEE 201
+ K+ L+ +K+ELD Q++ ++E K E +K E+
Sbjct: 808 HMEKDMVELGKLQEYKSELDERAVQEIEKLEEIHLQKQAEYEKQLEQ 854
Score = 33.5 bits (75), Expect = 0.24
Identities = 37/184 (20%), Positives = 83/184 (45%), Gaps = 28/184 (15%)
Query: 74 ELVDSEVVMLSAHWEKKKTSLVELQEQLQQL-PALIADLESMTANLTHLEASFEE----- 127
++++ EV+ L H EK L +LQE +L + ++E + +A +E+
Sbjct: 796 KMLEEEVLNLKTHMEKDMVELGKLQEYKSELDERAVQEIEKLEEIHLQKQAEYEKQLEQL 855
Query: 128 -------VENNLLHLEDLCGQCELERCKHMQSQ---QLENYKKNKRKELETFKAELDAEH 177
++ L L+D+ +C+ + K + +LE +K E F + A +
Sbjct: 856 NKDNTASLKKKELTLKDV--ECKFSKMKTAYEEVTTELEEFK-------EAFAGAVKANN 906
Query: 178 AQKVLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDM 237
+ M+ +++ + + F E ++ ME +LST ++ + +++S+E+N
Sbjct: 907 SMSKKLMKSDKKIAVISTKLFME---KERMEYFLSTLPMRPDPELPCVENLNSIELNRKY 963
Query: 238 LEQM 241
+ +M
Sbjct: 964 IPKM 967
>gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 44.3 bits (103), Expect = 1e-04
Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 102 QQLPALIADLESMTANLTHLEASFEEVENNLLHLEDLCGQCE-LERCKHMQSQQLENYKK 160
Q+ L+A+ E++++ +L E + LL + ++ +CE LE+ K M +++ N K
Sbjct: 855 QKFNDLVAEKEAVSSECVNLAKDNEVLHQELLSMRNVQEKCEKLEKDKKMLEEEVLNLKT 914
Query: 161 NKRKE------LETFKAELDAEHAQKVLEMEHTQQMKLKERQKFFEE 201
+ K+ L+ +K+ELD Q++ ++E K E +K E+
Sbjct: 915 HMEKDMVELGKLQEYKSELDERAVQEIEKLEEIHLQKQAEYEKQLEQ 961
Score = 32.0 bits (71), Expect = 0.69
Identities = 39/181 (21%), Positives = 82/181 (45%), Gaps = 36/181 (19%)
Query: 74 ELVDSEVVMLSAHWEKKKTSLVELQEQLQQL-PALIADLESMTANLTHLEASFEE----- 127
++++ EV+ L H EK L +LQE +L + ++E + +A +E+
Sbjct: 903 KMLEEEVLNLKTHMEKDMVELGKLQEYKSELDERAVQEIEKLEEIHLQKQAEYEKQLEQL 962
Query: 128 -------VENNLLHLEDLCGQCELERCKHMQSQ---QLENYKKNKRKELETFKAELDAEH 177
++ L L+D+ +C+ + K + +LE +K E F + A +
Sbjct: 963 NKDNTASLKKKELTLKDV--ECKFSKMKTAYEEVTTELEEFK-------EAFAGAVKANN 1013
Query: 178 AQKVLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREP----IGSMSSMEV 233
+ M+ +++ + + F E +Q M+ +LST + R EP + +++S+E+
Sbjct: 1014 SMSKKLMKSDKKIAVISTKLFTE---KQRMKYFLST----LPTRPEPELPCVENLNSIEL 1066
Query: 234 N 234
N
Sbjct: 1067 N 1067
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 44.3 bits (103), Expect = 1e-04
Identities = 52/230 (22%), Positives = 103/230 (44%), Gaps = 22/230 (9%)
Query: 50 ELLSRYEDTWAALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQLPALIA 109
ELLS+ E+T H + A ++SE+ L SL + +EQ L +I
Sbjct: 2288 ELLSQLEETRHLYHSSQNELAK----LESELKSLKDQLTDLSNSLEKCKEQKGNLEGIIR 2343
Query: 110 DLESMTANLTHLEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKELETF 169
E A++ + + S+E++E +L +L + E +M+ Q++ + K + ++
Sbjct: 2344 QQE---ADIQNSKFSYEQLETDLQASRELTSRLHEEI--NMKEQKIISLLSGKEEAIQVA 2398
Query: 170 KAELDAEHAQKVLEMEH------TQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERRE 223
AEL +H +++ E+E+ + + L+E K + Q ME + I ++ +
Sbjct: 2399 IAELRQQHDKEIKELENLLSQEEEENIVLEEENKKAVDKTNQLMETLKTIKKENIQQKAQ 2458
Query: 224 P---IGSMSSMEVNVDML----EQMDLMDISDQEALDVFLNSGGEENTVL 266
+ SMSS++ + D + +Q++ +S D + EN L
Sbjct: 2459 LDSFVKSMSSLQNDRDRIVGDYQQLEERHLSIILEKDQLIQEAAAENNKL 2508
Score = 33.9 bits (76), Expect = 0.18
Identities = 37/171 (21%), Positives = 73/171 (42%), Gaps = 22/171 (12%)
Query: 88 EKKKTSLVELQEQLQQLPALIADLESMTANLTHLEASFEEVENNLLHLEDLCGQCELERC 147
E KT E +Q QL + + + S+ + + ++++E HL + LE+
Sbjct: 2443 ETLKTIKKENIQQKAQLDSFVKSMSSLQNDRDRIVGDYQQLEER--HLSII-----LEKD 2495
Query: 148 KHMQSQQLENYK--------KNKRKELETFKAELDAEHAQKVLEMEHTQQMKLKERQKFF 199
+ +Q EN K ++ +L + A+LDAE Q ++ +K ++++
Sbjct: 2496 QLIQEAAAENNKLKEEIRGLRSHMDDLNSENAKLDAELIQYREDLNQVITIKDSQQKQLL 2555
Query: 200 EEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQMDLMDISDQE 250
E QQ+ E L Y ++ E+ + S E N D+ + + Q+
Sbjct: 2556 EVQLQQNKE--LENKYAKLEEKLK-----ESEEANEDLRRSFNALQEEKQD 2599
Score = 31.6 bits (70), Expect = 0.91
Identities = 56/288 (19%), Positives = 111/288 (38%), Gaps = 48/288 (16%)
Query: 3 ETLRERLLSVQQDFTSG-----LKTLSDKSREAKVKSKPRTVPFLP-------------- 43
ET ER+ + +D + T +K A+++S R++ L
Sbjct: 2699 ETAEERVAELARDLVEMEQKLLMVTKENKGLTAQIQSFGRSMSSLQNSRDHANEELDELK 2758
Query: 44 -KYSAGLELLSRYEDTWAALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQ 102
KY A L+ L++ ++ R + ++S +H EK L+ EQL
Sbjct: 2759 RKYDASLKELAQLKEQGLLNRERDALLSETAFSMNSTEENSLSHLEKLNQQLLSKDEQLL 2818
Query: 103 QLPALIADLESMTANLTHLEASFEEVENNLLHLEDLCGQCELERCKHMQ--SQQLENYKK 160
L + + D + + + AS + ++L + ELE+ + + Q+
Sbjct: 2819 HLSSQLEDSYNQVQSFSKAMASLQNERDHLWN--------ELEKFRKSEEGKQRSAAQPS 2870
Query: 161 NKRKELETFK---AELDAEHAQKVLEMEHTQQMKLKERQKFFE---------------EA 202
E+++ K + L + + + E+++ QQ L+ Q+ E +A
Sbjct: 2871 TSPAEVQSLKKAMSSLQNDRDRLLKELKNLQQQYLQINQEITELHPLKAQLQEYQDKTKA 2930
Query: 203 FQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQMDLMDISDQE 250
FQ E+ E + SS E++ +++ LM ISD++
Sbjct: 2931 FQIMQEELRQENLSWQHELHQLRMEKSSWEIHERRMKEQYLMAISDKD 2978
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 43.9 bits (102), Expect = 2e-04
Identities = 43/212 (20%), Positives = 90/212 (42%), Gaps = 27/212 (12%)
Query: 20 LKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWAALHRRAKDCASAGELVDSE 79
LK L++K++E ++ + + S++ T L +D E + E
Sbjct: 89 LKALTEKNKELEIAQ-----------DRNIAIQSQFTRTKEELEAEKRDLIRTNERLSQE 137
Query: 80 VVMLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLTHLEASFEEVENNLLHLEDLC 139
+ L+ ++ L E +L + +L++ ++ + E E+ E LLH ++
Sbjct: 138 LEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVSVKYREKRLEQ-EKELLHSQNTW 196
Query: 140 GQCELE----------RCKHMQSQQLENYKKNKRKELETFKAELDA-----EHAQKVLEM 184
EL+ R K + +L+ +NK++E+ + +++ EH QK +E
Sbjct: 197 LNTELKTKTDELLALGREKGNEILELKCNLENKKEEVSRLEEQMNGLKTSNEHLQKHVED 256
Query: 185 EHTQQMKLKERQKFFEEAFQQDMEQYLSTGYL 216
T+ + KE+Q EE F ++ ++ L
Sbjct: 257 LLTKLKEAKEQQASMEEKFHNELNAHIKLSNL 288
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 43.5 bits (101), Expect = 2e-04
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 32/174 (18%)
Query: 88 EKKKTSLVE----LQEQLQQLPALIADLESMTANLTHLEASFEEVENNLLHLEDLCGQCE 143
E+K L+E L EQLQ L A+ E M A L + EE+ L DL + E
Sbjct: 879 ERKHQQLLEEKNILAEQLQAETELFAEAEEMRARLAAKKQELEEI------LHDLESRVE 932
Query: 144 LERCKHMQSQQLENYKKNKRKELETFKAELDAEH-AQKVLEMEH-TQQMKLK-------- 193
E ++Q L+N KK + ++ + +LD E A++ L++E T + K+K
Sbjct: 933 EE---EERNQILQNEKKKMQAHIQDLEEQLDEEEGARQKLQLEKVTAEAKIKKMEEEILL 989
Query: 194 ---ERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSM----EVNVDMLEQ 240
+ KF +E ++ ME ++ Q+AE E +++ + EV + LE+
Sbjct: 990 LEDQNSKFIKE--KKLMEDRIAECSSQLAEEEEKAKNLAKIRNKQEVMISDLEE 1041
Score = 30.8 bits (68), Expect = 1.5
Identities = 63/317 (19%), Positives = 121/317 (38%), Gaps = 46/317 (14%)
Query: 24 SDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWAALHRRAKDCASAGELVDSEVVML 83
++K+R+ +K + + Y LE D + ++K+ + +++E++ L
Sbjct: 1636 ANKARDEVIKQLRKLQAQMKDYQRELEEARASRDE---IFAQSKESEKKLKSLEAEILQL 1692
Query: 84 SA----------HWEKKKTSLV-ELQEQLQQLPALIADLESMTANLTHLEASFEEVENNL 132
H E+++ L E+ AL+ + + A + LE EE ++N+
Sbjct: 1693 QEELASSERARRHAEQERDELADEITNSASGKSALLDEKRRLEARIAQLEEELEEEQSNM 1752
Query: 133 -----------LHLEDLCGQCELERCKHMQSQQLENYKKNKRKELETFKAELDAEHAQK- 180
L ++ L + ER +S + + KEL+ EL+ K
Sbjct: 1753 ELLNDRFRKTTLQVDTLNAELAAERSAAQKSDNARQQLERQNKELKAKLQELEGAVKSKF 1812
Query: 181 -----VLEMEHTQ---QMKLKERQKFFEEAFQQDMEQYLSTGYLQIA-ERREPIGSMSSM 231
LE + Q Q++ + +++ + E+ L ++Q+ ERR M
Sbjct: 1813 KATISALEAKIGQLEEQLEQEAKERAAANKLVRRTEKKLKEIFMQVEDERRHADQYKEQM 1872
Query: 232 E-VNVDMLEQMDLMDISDQEA---------LDVFLNSGGEENTVLSPALGRVDKLALAEP 281
E N M + ++ +++EA L L+ E N LS + + K L
Sbjct: 1873 EKANARMKQLKRQLEEAEEEATRANASRRKLQRELDDATEANEGLSREVSTL-KNRLRRG 1931
Query: 282 GQYRCHSPPKVRRENHL 298
G S RR+ HL
Sbjct: 1932 GPISFSSSRSGRRQLHL 1948
>gi|32698688 citron [Homo sapiens]
Length = 2027
Score = 43.5 bits (101), Expect = 2e-04
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 32/215 (14%)
Query: 3 ETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPK---YSAGLELLSRY---- 55
E +R++L+ ++ L +K REA+V ++ V K Y +++L
Sbjct: 684 EGIRKKLVEAEE--------LEEKHREAQVSAQHLEVHLKQKEQHYEEKIKVLDNQIKKD 735
Query: 56 ----EDTWAALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADL 111
E + R ++ G+++ + M++A + K SL + +L + L A+
Sbjct: 736 LADKETLENMMQRHEEEAHEKGKILSEQKAMINA-MDSKIRSLEQRIVELSEANKLAANS 794
Query: 112 ESMTA-NLTHLEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYK------KNKRK 164
T N+ E E+ +LE G+ E + K +QLE KN+
Sbjct: 795 SLFTQRNMKAQEEMISELRQQKFYLETQAGKLEAQNRK--LEEQLEKISHQDHSDKNRLL 852
Query: 165 ELETFKAELDAEHAQKVLEMEH---TQQMKLKERQ 196
ELET E+ EH ++ LE++ Q+ L+ER+
Sbjct: 853 ELETRLREVSLEHEEQKLELKRQLTELQLSLQERE 887
>gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens]
Length = 1498
Score = 43.5 bits (101), Expect = 2e-04
Identities = 53/211 (25%), Positives = 84/211 (39%), Gaps = 34/211 (16%)
Query: 3 ETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWAAL 62
E L++++ +QQ+ + K R K+ A YE+ L
Sbjct: 954 EALKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEMKTKHKA-------YENAVGIL 1006
Query: 63 HRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLTHLE 122
RR ++ +A E D+E+ L A +SL L E++Q AL A+L++++ + T LE
Sbjct: 1007 SRRLQEALAAKEAADAELGQLRAQGGSSDSSLA-LHERIQ---ALEAELQAVSHSKTLLE 1062
Query: 123 ASFEEV-----------ENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKRKELETFKA 171
+EV +L LED EL+ + + KK KR E K
Sbjct: 1063 KELQEVIALTSQELEESREKVLELED-----ELQESRGFR-------KKIKRLEESNKKL 1110
Query: 172 ELDAEHAQKVLEMEHTQQMKLKERQKFFEEA 202
L+ EH + L L+E E A
Sbjct: 1111 ALELEHEKGKLTGLGQSNAALREHNSILETA 1141
Score = 32.7 bits (73), Expect = 0.41
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 86 HWEKKKTSLVELQEQLQQLPALIADLESMTANLTHLE-------ASFE-EVENNLLHLED 137
H++ L E++++LQ L+ L++ +L E A F+ E+ L+
Sbjct: 1208 HFKAASLELSEVKKELQAKEHLVQKLQAEADDLQIREGKHSQEIAQFQAELAEARAQLQL 1267
Query: 138 LCGQCELERCKH-MQSQQLENYK---KNKRKELETFKAELDAEHAQKVLEMEHTQQMKLK 193
L Q + + K + +Q++EN K K +E+++ K +LD Q E+E QQ L
Sbjct: 1268 LQKQLDEQLSKQPVGNQEMENLKWEVDQKEREIQSLKQQLDLTEQQGRKELEGLQQ--LL 1325
Query: 194 ERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSM 231
+ K E Q+D+ ++ A+ E +M ++
Sbjct: 1326 QNVKSELEMAQEDLSMTQKDKFMLQAKVSELKNNMKTL 1363
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 42.4 bits (98), Expect = 5e-04
Identities = 41/128 (32%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 88 EKKKTSLVE----LQEQLQQLPALIADLESMTANLT----HLEASFEEVENNLLHLEDLC 139
E+K + L E LQEQLQ L A+ E M L LE E+E L ED
Sbjct: 879 EQKHSQLTEEKNLLQEQLQAETELYAEAEEMRVRLAAKKQELEEILHEMEARLEEEEDRG 938
Query: 140 GQCELERCKHMQ-----SQQLENYKKNKRK-ELETFKAELDAEHAQKVLEMEHTQQMKLK 193
Q + ER K Q +QLE + ++K +LE AE + + + + Q KL
Sbjct: 939 QQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDEILVMDDQNNKLS 998
Query: 194 ERQKFFEE 201
+ +K EE
Sbjct: 999 KERKLLEE 1006
Score = 36.2 bits (82), Expect = 0.037
Identities = 54/249 (21%), Positives = 101/249 (40%), Gaps = 23/249 (9%)
Query: 7 ERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWAALHRRA 66
++LL+ +++ +S D++ + + + + LE E T L
Sbjct: 1454 DQLLAEEKNISSKYADERDRAEAEAREKETKALSLARALEEALEAKEELERTNKMLKAEM 1513
Query: 67 KDCASAGELVDSEVV-------MLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLT 119
+D S+ + V V L E+ KT L EL+++LQ LE N+
Sbjct: 1514 EDLVSSKDDVGKNVHELEKSKRALETQMEEMKTQLEELEDELQATEDAKLRLE---VNMQ 1570
Query: 120 HLEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKK--------NKRKELETFKA 171
L+ FE + ++ + +L+R H +LE+ +K K+ E +
Sbjct: 1571 ALKGQFER-DLQARDEQNEEKRRQLQRQLHEYETELEDERKQRALAAAAKKKLEGDLKDL 1629
Query: 172 ELDAEHAQKVLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSM 231
EL A+ A K E Q KL+ + K FQ+++E ++ A +E S+
Sbjct: 1630 ELQADSAIKGREEAIKQLRKLQAQMK----DFQRELEDARASRDEIFATAKENEKKAKSL 1685
Query: 232 EVNVDMLEQ 240
E ++ L++
Sbjct: 1686 EADLMQLQE 1694
Score = 33.9 bits (76), Expect = 0.18
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 3 ETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWAAL 62
E +R RL + +Q+ L + + E + + + L+L + E+ AA
Sbjct: 907 EEMRVRLAAKKQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAAR 966
Query: 63 HRRAKDCASAGELV---DSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLT 119
+ + +A + + E++++ K L+E++ L +A+ E NLT
Sbjct: 967 QKLQLEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLT 1026
Query: 120 HLEASFEEVENNL---LHLEDLCGQCELERCKH---------------MQSQ--QLENYK 159
L+ E + + L L E+ Q ELE+ K +Q+Q +L+
Sbjct: 1027 KLKNKHESMISELEVRLKKEEKSRQ-ELEKLKRKLEGDASDFHEQIADLQAQIAELKMQL 1085
Query: 160 KNKRKELETFKAELDAEHAQK 180
K +EL+ A LD E AQK
Sbjct: 1086 AKKEEELQAALARLDDEIAQK 1106
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 42.4 bits (98), Expect = 5e-04
Identities = 41/128 (32%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 88 EKKKTSLVE----LQEQLQQLPALIADLESMTANLT----HLEASFEEVENNLLHLEDLC 139
E+K + L E LQEQLQ L A+ E M L LE E+E L ED
Sbjct: 886 EQKHSQLTEEKNLLQEQLQAETELYAEAEEMRVRLAAKKQELEEILHEMEARLEEEEDRG 945
Query: 140 GQCELERCKHMQ-----SQQLENYKKNKRK-ELETFKAELDAEHAQKVLEMEHTQQMKLK 193
Q + ER K Q +QLE + ++K +LE AE + + + + Q KL
Sbjct: 946 QQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDEILVMDDQNNKLS 1005
Query: 194 ERQKFFEE 201
+ +K EE
Sbjct: 1006 KERKLLEE 1013
Score = 36.2 bits (82), Expect = 0.037
Identities = 54/249 (21%), Positives = 101/249 (40%), Gaps = 23/249 (9%)
Query: 7 ERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWAALHRRA 66
++LL+ +++ +S D++ + + + + LE E T L
Sbjct: 1461 DQLLAEEKNISSKYADERDRAEAEAREKETKALSLARALEEALEAKEELERTNKMLKAEM 1520
Query: 67 KDCASAGELVDSEVV-------MLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLT 119
+D S+ + V V L E+ KT L EL+++LQ LE N+
Sbjct: 1521 EDLVSSKDDVGKNVHELEKSKRALETQMEEMKTQLEELEDELQATEDAKLRLE---VNMQ 1577
Query: 120 HLEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKK--------NKRKELETFKA 171
L+ FE + ++ + +L+R H +LE+ +K K+ E +
Sbjct: 1578 ALKGQFER-DLQARDEQNEEKRRQLQRQLHEYETELEDERKQRALAAAAKKKLEGDLKDL 1636
Query: 172 ELDAEHAQKVLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSM 231
EL A+ A K E Q KL+ + K FQ+++E ++ A +E S+
Sbjct: 1637 ELQADSAIKGREEAIKQLRKLQAQMK----DFQRELEDARASRDEIFATAKENEKKAKSL 1692
Query: 232 EVNVDMLEQ 240
E ++ L++
Sbjct: 1693 EADLMQLQE 1701
Score = 33.9 bits (76), Expect = 0.18
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 3 ETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWAAL 62
E +R RL + +Q+ L + + E + + + L+L + E+ AA
Sbjct: 914 EEMRVRLAAKKQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAAR 973
Query: 63 HRRAKDCASAGELV---DSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLT 119
+ + +A + + E++++ K L+E++ L +A+ E NLT
Sbjct: 974 QKLQLEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLT 1033
Query: 120 HLEASFEEVENNL---LHLEDLCGQCELERCKH---------------MQSQ--QLENYK 159
L+ E + + L L E+ Q ELE+ K +Q+Q +L+
Sbjct: 1034 KLKNKHESMISELEVRLKKEEKSRQ-ELEKLKRKLEGDASDFHEQIADLQAQIAELKMQL 1092
Query: 160 KNKRKELETFKAELDAEHAQK 180
K +EL+ A LD E AQK
Sbjct: 1093 AKKEEELQAALARLDDEIAQK 1113
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 42.4 bits (98), Expect = 5e-04
Identities = 41/128 (32%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 88 EKKKTSLVE----LQEQLQQLPALIADLESMTANLT----HLEASFEEVENNLLHLEDLC 139
E+K + L E LQEQLQ L A+ E M L LE E+E L ED
Sbjct: 886 EQKHSQLTEEKNLLQEQLQAETELYAEAEEMRVRLAAKKQELEEILHEMEARLEEEEDRG 945
Query: 140 GQCELERCKHMQ-----SQQLENYKKNKRK-ELETFKAELDAEHAQKVLEMEHTQQMKLK 193
Q + ER K Q +QLE + ++K +LE AE + + + + Q KL
Sbjct: 946 QQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDEILVMDDQNNKLS 1005
Query: 194 ERQKFFEE 201
+ +K EE
Sbjct: 1006 KERKLLEE 1013
Score = 36.2 bits (82), Expect = 0.037
Identities = 54/249 (21%), Positives = 101/249 (40%), Gaps = 23/249 (9%)
Query: 7 ERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWAALHRRA 66
++LL+ +++ +S D++ + + + + LE E T L
Sbjct: 1461 DQLLAEEKNISSKYADERDRAEAEAREKETKALSLARALEEALEAKEELERTNKMLKAEM 1520
Query: 67 KDCASAGELVDSEVV-------MLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLT 119
+D S+ + V V L E+ KT L EL+++LQ LE N+
Sbjct: 1521 EDLVSSKDDVGKNVHELEKSKRALETQMEEMKTQLEELEDELQATEDAKLRLE---VNMQ 1577
Query: 120 HLEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKK--------NKRKELETFKA 171
L+ FE + ++ + +L+R H +LE+ +K K+ E +
Sbjct: 1578 ALKGQFER-DLQARDEQNEEKRRQLQRQLHEYETELEDERKQRALAAAAKKKLEGDLKDL 1636
Query: 172 ELDAEHAQKVLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSM 231
EL A+ A K E Q KL+ + K FQ+++E ++ A +E S+
Sbjct: 1637 ELQADSAIKGREEAIKQLRKLQAQMK----DFQRELEDARASRDEIFATAKENEKKAKSL 1692
Query: 232 EVNVDMLEQ 240
E ++ L++
Sbjct: 1693 EADLMQLQE 1701
Score = 33.9 bits (76), Expect = 0.18
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 3 ETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWAAL 62
E +R RL + +Q+ L + + E + + + L+L + E+ AA
Sbjct: 914 EEMRVRLAAKKQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAAR 973
Query: 63 HRRAKDCASAGELV---DSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLT 119
+ + +A + + E++++ K L+E++ L +A+ E NLT
Sbjct: 974 QKLQLEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLT 1033
Query: 120 HLEASFEEVENNL---LHLEDLCGQCELERCKH---------------MQSQ--QLENYK 159
L+ E + + L L E+ Q ELE+ K +Q+Q +L+
Sbjct: 1034 KLKNKHESMISELEVRLKKEEKSRQ-ELEKLKRKLEGDASDFHEQIADLQAQIAELKMQL 1092
Query: 160 KNKRKELETFKAELDAEHAQK 180
K +EL+ A LD E AQK
Sbjct: 1093 AKKEEELQAALARLDDEIAQK 1113
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 42.4 bits (98), Expect = 5e-04
Identities = 41/128 (32%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 88 EKKKTSLVE----LQEQLQQLPALIADLESMTANLT----HLEASFEEVENNLLHLEDLC 139
E+K + L E LQEQLQ L A+ E M L LE E+E L ED
Sbjct: 879 EQKHSQLTEEKNLLQEQLQAETELYAEAEEMRVRLAAKKQELEEILHEMEARLEEEEDRG 938
Query: 140 GQCELERCKHMQ-----SQQLENYKKNKRK-ELETFKAELDAEHAQKVLEMEHTQQMKLK 193
Q + ER K Q +QLE + ++K +LE AE + + + + Q KL
Sbjct: 939 QQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDEILVMDDQNNKLS 998
Query: 194 ERQKFFEE 201
+ +K EE
Sbjct: 999 KERKLLEE 1006
Score = 36.2 bits (82), Expect = 0.037
Identities = 54/249 (21%), Positives = 101/249 (40%), Gaps = 23/249 (9%)
Query: 7 ERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWAALHRRA 66
++LL+ +++ +S D++ + + + + LE E T L
Sbjct: 1454 DQLLAEEKNISSKYADERDRAEAEAREKETKALSLARALEEALEAKEELERTNKMLKAEM 1513
Query: 67 KDCASAGELVDSEVV-------MLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLT 119
+D S+ + V V L E+ KT L EL+++LQ LE N+
Sbjct: 1514 EDLVSSKDDVGKNVHELEKSKRALETQMEEMKTQLEELEDELQATEDAKLRLE---VNMQ 1570
Query: 120 HLEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKK--------NKRKELETFKA 171
L+ FE + ++ + +L+R H +LE+ +K K+ E +
Sbjct: 1571 ALKGQFER-DLQARDEQNEEKRRQLQRQLHEYETELEDERKQRALAAAAKKKLEGDLKDL 1629
Query: 172 ELDAEHAQKVLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSM 231
EL A+ A K E Q KL+ + K FQ+++E ++ A +E S+
Sbjct: 1630 ELQADSAIKGREEAIKQLRKLQAQMK----DFQRELEDARASRDEIFATAKENEKKAKSL 1685
Query: 232 EVNVDMLEQ 240
E ++ L++
Sbjct: 1686 EADLMQLQE 1694
Score = 33.9 bits (76), Expect = 0.18
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 24/201 (11%)
Query: 3 ETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRYEDTWAAL 62
E +R RL + +Q+ L + + E + + + L+L + E+ AA
Sbjct: 907 EEMRVRLAAKKQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAAR 966
Query: 63 HRRAKDCASAGELV---DSEVVMLSAHWEKKKTSLVELQEQLQQLPALIADLESMTANLT 119
+ + +A + + E++++ K L+E++ L +A+ E NLT
Sbjct: 967 QKLQLEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLT 1026
Query: 120 HLEASFEEVENNL---LHLEDLCGQCELERCKH---------------MQSQ--QLENYK 159
L+ E + + L L E+ Q ELE+ K +Q+Q +L+
Sbjct: 1027 KLKNKHESMISELEVRLKKEEKSRQ-ELEKLKRKLEGDASDFHEQIADLQAQIAELKMQL 1085
Query: 160 KNKRKELETFKAELDAEHAQK 180
K +EL+ A LD E AQK
Sbjct: 1086 AKKEEELQAALARLDDEIAQK 1106
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.128 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,799,624
Number of Sequences: 37866
Number of extensions: 453705
Number of successful extensions: 2808
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 401
Number of HSP's that attempted gapping in prelim test: 2254
Number of HSP's gapped (non-prelim): 938
length of query: 303
length of database: 18,247,518
effective HSP length: 102
effective length of query: 201
effective length of database: 14,385,186
effective search space: 2891422386
effective search space used: 2891422386
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.