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Search of human proteins with 34147522
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|34147522 chaperone, ABC1 activity of bc1 complex like
precursor [Homo sapiens]
(647 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|34147522 chaperone, ABC1 activity of bc1 complex like precurs... 1295 0.0
gi|27363457 aarF domain containing kinase 4 isoform a [Homo sapi... 584 e-167
gi|217416386 aarF domain containing kinase 4 isoform b [Homo sap... 511 e-144
gi|40254938 aarF domain containing kinase 1 isoform a [Homo sapi... 98 3e-20
gi|41393593 aarF domain containing kinase 5 [Homo sapiens] 79 2e-14
gi|217035081 aarF domain containing kinase 1 isoform b [Homo sap... 75 2e-13
gi|33946327 nucleoporin 214kDa [Homo sapiens] 37 0.057
gi|31795544 origin recognition complex, subunit 1 [Homo sapiens] 35 0.28
gi|24430132 WW domain binding protein 2 [Homo sapiens] 33 0.82
gi|167614500 lymphocyte-activation protein 3 precursor [Homo sap... 33 1.1
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin... 33 1.1
gi|153792074 proline rich 12 [Homo sapiens] 33 1.1
gi|197313667 cell division cycle 7 [Homo sapiens] 32 1.4
gi|197313665 cell division cycle 7 [Homo sapiens] 32 1.4
gi|4502715 cell division cycle 7 [Homo sapiens] 32 1.4
gi|148612857 sickle tail isoform 3 [Homo sapiens] 32 1.4
gi|148612813 sickle tail isoform 2 [Homo sapiens] 32 1.4
gi|50843820 sickle tail isoform 1 [Homo sapiens] 32 1.4
gi|115511036 alpha-kinase 3 [Homo sapiens] 32 1.8
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 32 2.4
gi|47271475 SPOC domain containing 1 [Homo sapiens] 32 2.4
gi|169210350 PREDICTED: hypothetical protein [Homo sapiens] 31 3.1
gi|113426339 PREDICTED: hypothetical protein [Homo sapiens] 31 3.1
gi|113426005 PREDICTED: hypothetical protein [Homo sapiens] 31 3.1
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] 31 3.1
gi|225543215 antigen identified by monoclonal antibody Ki-67 iso... 30 5.3
gi|103472005 antigen identified by monoclonal antibody Ki-67 iso... 30 5.3
gi|76781485 vascular endothelial growth factor A isoform f precu... 30 5.3
gi|76781484 vascular endothelial growth factor A isoform e precu... 30 5.3
gi|76781483 vascular endothelial growth factor A isoform d precu... 30 5.3
>gi|34147522 chaperone, ABC1 activity of bc1 complex like precursor
[Homo sapiens]
Length = 647
Score = 1295 bits (3350), Expect = 0.0
Identities = 647/647 (100%), Positives = 647/647 (100%)
Query: 1 MAAILGDTIMVAKGLVKLTQAAVETHLQHLGIGGELIMAARALQSTAVEQIGMFLGKVQG 60
MAAILGDTIMVAKGLVKLTQAAVETHLQHLGIGGELIMAARALQSTAVEQIGMFLGKVQG
Sbjct: 1 MAAILGDTIMVAKGLVKLTQAAVETHLQHLGIGGELIMAARALQSTAVEQIGMFLGKVQG 60
Query: 61 QDKHEEYFAENFGGPEGEFHFSVPHAAGASTDFSSASAPDQSAPPSLGHAHSEGPAPAYV 120
QDKHEEYFAENFGGPEGEFHFSVPHAAGASTDFSSASAPDQSAPPSLGHAHSEGPAPAYV
Sbjct: 61 QDKHEEYFAENFGGPEGEFHFSVPHAAGASTDFSSASAPDQSAPPSLGHAHSEGPAPAYV 120
Query: 121 ASGPFREAGFPGQASSPLGRANGRLFANPRDSFSAMGFQRRFFHQDQSPVGGLTAEDIEK 180
ASGPFREAGFPGQASSPLGRANGRLFANPRDSFSAMGFQRRFFHQDQSPVGGLTAEDIEK
Sbjct: 121 ASGPFREAGFPGQASSPLGRANGRLFANPRDSFSAMGFQRRFFHQDQSPVGGLTAEDIEK 180
Query: 181 ARQAKARPENKQHKQTLSEHARERKVPVTRIGRLANFGGLAVGLGFGALAEVAKKSLRSE 240
ARQAKARPENKQHKQTLSEHARERKVPVTRIGRLANFGGLAVGLGFGALAEVAKKSLRSE
Sbjct: 181 ARQAKARPENKQHKQTLSEHARERKVPVTRIGRLANFGGLAVGLGFGALAEVAKKSLRSE 240
Query: 241 DPSGKKAVLGSSPFLSEANAERIVRTLCKVRGAALKLGQMLSIQDDAFINPHLAKIFERV 300
DPSGKKAVLGSSPFLSEANAERIVRTLCKVRGAALKLGQMLSIQDDAFINPHLAKIFERV
Sbjct: 241 DPSGKKAVLGSSPFLSEANAERIVRTLCKVRGAALKLGQMLSIQDDAFINPHLAKIFERV 300
Query: 301 RQSADFMPLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQ 360
RQSADFMPLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQ
Sbjct: 301 RQSADFMPLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQ 360
Query: 361 YPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAACARKFRD 420
YPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAACARKFRD
Sbjct: 361 YPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAACARKFRD 420
Query: 421 LLKGHPFFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVLCLRELF 480
LLKGHPFFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVLCLRELF
Sbjct: 421 LLKGHPFFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVLCLRELF 480
Query: 481 EFHFMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQIIRAAADRDRETVRAK 540
EFHFMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQIIRAAADRDRETVRAK
Sbjct: 481 EFHFMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQIIRAAADRDRETVRAK 540
Query: 541 SIEMKFLTGYEVKVMEDAHLDAILILGEAFASDEPFDFGTQSTTEKIHNLIPVMLRHRLV 600
SIEMKFLTGYEVKVMEDAHLDAILILGEAFASDEPFDFGTQSTTEKIHNLIPVMLRHRLV
Sbjct: 541 SIEMKFLTGYEVKVMEDAHLDAILILGEAFASDEPFDFGTQSTTEKIHNLIPVMLRHRLV 600
Query: 601 PPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNYCKRQAQQ 647
PPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNYCKRQAQQ
Sbjct: 601 PPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNYCKRQAQQ 647
>gi|27363457 aarF domain containing kinase 4 isoform a [Homo
sapiens]
Length = 544
Score = 584 bits (1506), Expect = e-167
Identities = 301/517 (58%), Positives = 373/517 (72%), Gaps = 13/517 (2%)
Query: 129 GFPGQASSPLGRANGRLFANPRDSFSAMGFQRRFFHQDQSPVGGLTAEDIEKARQAKARP 188
G GQ +G G L P G + F+QD P GL EDI +AR+A+ R
Sbjct: 11 GTGGQLGQTVGWPCGALGPGPHRWGPCGGSWAQKFYQD-GPGRGLGEEDIRRAREARPR- 68
Query: 189 ENKQHKQTLSEHARERKVPVTRIGRLANFGGLAVGLGFGALAEVAKKS-----LRSEDPS 243
K + LS+ +RERKVP +RI RLANFGGLAVGLG G LAE+AKKS L+SE S
Sbjct: 69 --KTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAKKSMPGGRLQSEGGS 126
Query: 244 GKKAVLGSSPFLSEANAERIVRTLCKVRGAALKLGQMLSIQDDAFINPHLAKIFERVRQS 303
G L SSPFLSEANAERIV+TLC VRGAALK+GQMLSIQD++FI+P L IFERVRQS
Sbjct: 127 G----LDSSPFLSEANAERIVQTLCTVRGAALKVGQMLSIQDNSFISPQLQHIFERVRQS 182
Query: 304 ADFMPLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQYPG 363
ADFMP QM++ L +LG +W+ K+ EE PFAAASIGQVH ++ G EVA+KIQYPG
Sbjct: 183 ADFMPRWQMLRVLEEELGRDWQAKVASLEEVPFAAASIGQVHQGLLRDGTEVAVKIQYPG 242
Query: 364 VAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAACARKFRDLLK 423
+AQSI SDV NL+AVL MS LP GLF E + L++ELA ECDY+REAACA+ FR LL
Sbjct: 243 IAQSIQSDVQNLLAVLKMSAALPAGLFAEQSLQALQQELAWECDYRREAACAQNFRQLLA 302
Query: 424 GHPFFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVLCLRELFEFH 483
PFF VP +V ELC+ VL EL G PLDQ +GLSQ++RN+IC+ +L LCLRELFEF
Sbjct: 303 NDPFFRVPAVVKELCTTRVLGMELAGGVPLDQCQGLSQDLRNQICFQLLTLCLRELFEFR 362
Query: 484 FMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQIIRAAADRDRETVRAKSIE 543
FMQTDPNW+NF YD H+V LLDFGA+RE+ FTD YI++++AAAD DR+ V KS +
Sbjct: 363 FMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADGDRDCVLQKSRD 422
Query: 544 MKFLTGYEVKVMEDAHLDAILILGEAFASDEPFDFGTQSTTEKIHNLIPVMLRHRLVPPP 603
+KFLTG+E K DAH++A++ILGE FA+ P+DFG+ T +I +LIPV+LRHRL PPP
Sbjct: 423 LKFLTGFETKAFSDAHVEAVMILGEPFATQGPYDFGSGETARRIQDLIPVLLRHRLCPPP 482
Query: 604 EETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 640
EETY+LHRK+ G+FL C+ L+A C+ +F++ Y Y
Sbjct: 483 EETYALHRKLAGAFLACAHLRAHIACRDLFQDTYHRY 519
>gi|217416386 aarF domain containing kinase 4 isoform b [Homo
sapiens]
Length = 503
Score = 511 bits (1315), Expect = e-144
Identities = 266/512 (51%), Positives = 337/512 (65%), Gaps = 44/512 (8%)
Query: 129 GFPGQASSPLGRANGRLFANPRDSFSAMGFQRRFFHQDQSPVGGLTAEDIEKARQAKARP 188
G GQ +G G L P G + F+QD P GL EDI +AR+A+ R
Sbjct: 11 GTGGQLGQTVGWPCGALGPGPHRWGPCGGSWAQKFYQD-GPGRGLGEEDIRRAREARPR- 68
Query: 189 ENKQHKQTLSEHARERKVPVTRIGRLANFGGLAVGLGFGALAEVAKKSLRSEDPSGKKAV 248
K + LS+ +RERKVP +RI RLANFGGLAVGLG G LAE+AKKS+ P G+
Sbjct: 69 --KTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAKKSM----PGGRLQ- 121
Query: 249 LGSSPFLSEANAERIVRTLCKVRGAALKLGQMLSIQDDAFINPHLAKIFERVRQSADFMP 308
D++FI+P L IFERVRQSADFMP
Sbjct: 122 -----------------------------------SDNSFISPQLQHIFERVRQSADFMP 146
Query: 309 LKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQYPGVAQSI 368
QM++ L +LG +W+ K+ EE PFAAASIGQVH ++ G EVA+KIQYPG+AQSI
Sbjct: 147 RWQMLRVLEEELGRDWQAKVASLEEVPFAAASIGQVHQGLLRDGTEVAVKIQYPGIAQSI 206
Query: 369 NSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAACARKFRDLLKGHPFF 428
SDV NL+AVL MS LP GLF E + L++ELA ECDY+REAACA+ FR LL PFF
Sbjct: 207 QSDVQNLLAVLKMSAALPAGLFAEQSLQALQQELAWECDYRREAACAQNFRQLLANDPFF 266
Query: 429 YVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVLCLRELFEFHFMQTD 488
VP +V ELC+ VL EL G PLDQ +GLSQ++RN+IC+ +L LCLRELFEF FMQTD
Sbjct: 267 RVPAVVKELCTTRVLGMELAGGVPLDQCQGLSQDLRNQICFQLLTLCLRELFEFRFMQTD 326
Query: 489 PNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQIIRAAADRDRETVRAKSIEMKFLT 548
PNW+NF YD H+V LLDFGA+RE+ FTD YI++++AAAD DR+ V KS ++KFLT
Sbjct: 327 PNWANFLYDASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADGDRDCVLQKSRDLKFLT 386
Query: 549 GYEVKVMEDAHLDAILILGEAFASDEPFDFGTQSTTEKIHNLIPVMLRHRLVPPPEETYS 608
G+E K DAH++A++ILGE FA+ P+DFG+ T +I +LIPV+LRHRL PPPEETY+
Sbjct: 387 GFETKAFSDAHVEAVMILGEPFATQGPYDFGSGETARRIQDLIPVLLRHRLCPPPEETYA 446
Query: 609 LHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 640
LHRK+ G+FL C+ L+A C+ +F++ Y Y
Sbjct: 447 LHRKLAGAFLACAHLRAHIACRDLFQDTYHRY 478
>gi|40254938 aarF domain containing kinase 1 isoform a [Homo
sapiens]
Length = 523
Score = 97.8 bits (242), Expect = 3e-20
Identities = 88/336 (26%), Positives = 150/336 (44%), Gaps = 21/336 (6%)
Query: 216 NFGGLAVGLGFGALAEVAKKSLRS--EDPSGKKAVLGSSPFLSEANAERIVRTLCKVRGA 273
+FG + VG A ++ L S P G + L + +A R+ C RG
Sbjct: 33 DFGAVRVGRAVATTAVISYDYLTSLKSVPYGSEEYLQLRSKVHLRSARRLCELCCANRGT 92
Query: 274 ALKLGQMLSIQDDAFINPHLAKIFERVRQSADFMPLKQMMKTLNNDLGPNWRDKLEYFEE 333
+K+GQ L D + + + + + A ++++ + + DLG D + F++
Sbjct: 93 FIKVGQHLGALDYLLPEEYTSTL-KVLHSQAPQSSMQEIRQVIREDLGKEIHDLFQSFDD 151
Query: 334 RPFAAASIGQVHLARMKGGREVAMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEH 393
P AS+ QVH A + GR VA+K+Q+P V + D+ LM VL ++ + LFPE
Sbjct: 152 TPLGTASLAQVHKAVLHDGRTVAVKVQHPKVRAQSSKDI-LLMEVLVLA---VKQLFPEF 207
Query: 394 ----LIDVLRRELALECDYQREAACARKFRDLLKGHPFFYVPEIVDELCSPHVLTTELVS 449
L+D ++ L LE D+ E A K +L+ F VP I +L + VL E V
Sbjct: 208 EFMWLVDEAKKNLPLELDFLNEGRNAEKVSQMLRHFDFLKVPRIHWDLSTERVLLMEFVD 267
Query: 450 GFPLDQAEGLSQE--IRNEICYNILVLCLRELFEFHFMQTDPNWSNFFYDPQ----QHKV 503
G ++ + + + NEI ++ + +F F+ DP+ N + ++
Sbjct: 268 GGQVNDRDYMERNKIDVNEISRHLGKMYSEMIFVNGFVHCDPHPGNVLVRKHPGTGKAEI 327
Query: 504 ALLDFG----ATREYDRSFTDLYIQIIRAAADRDRE 535
LLD G T E+ ++ L+ +I R +E
Sbjct: 328 VLLDHGLYQMLTEEFRLNYCHLWQSLIWTDMKRVKE 363
>gi|41393593 aarF domain containing kinase 5 [Homo sapiens]
Length = 580
Score = 78.6 bits (192), Expect = 2e-14
Identities = 76/349 (21%), Positives = 146/349 (41%), Gaps = 15/349 (4%)
Query: 201 ARERKVPVTRIGRLANFG-----GLAVGLGFGALAEVAKKSLRSEDPSGKKAVLGSSPFL 255
ARE++ + + FG GL + L + V + + P G V+ +
Sbjct: 71 AREKRRMRLVVDGMGRFGRSLKVGLQISLDYWWCTNVVLRGVEENSP-GYLEVMSAC--- 126
Query: 256 SEANAERIVRTLCKVRGAALKLGQMLSIQDDAFINPHLAKIFERVRQSADFMPLKQMMKT 315
+ A+ +V G +KLGQ L + + P + + A +++ +
Sbjct: 127 HQRAADALVAGAISNGGLYVKLGQGLC-SFNHLLPPEYTRTLRVLEDRALKRGFQEVDEL 185
Query: 316 LNNDLGPNWRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQYPGVAQSINSDVNNL 375
D + + F+ +P AAAS+ QVH A++ G VA+K+QY + + D++ L
Sbjct: 186 FLEDFQALPHELFQEFDYQPIAAASLAQVHRAKLHDGTSVAVKVQYIDLRDRFDGDIHTL 245
Query: 376 MAVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAACARKFRDLLKGHPFFYVPEIVD 435
+L + ++ ++ L+ LA E D++ E A + L P+ VP +
Sbjct: 246 ELLLRLVEVMHPSFGFSWVLQDLKGTLAQELDFENEGRNAERCARELAHFPYVVVPRVHW 305
Query: 436 ELCSPHVLTTELVSGFPLDQAEGLSQE--IRNEICYNILVLCLRELFEFHFMQTDPNWSN 493
+ S VLT + +G ++ E + + ++I ++ ++F F+ +DP+ N
Sbjct: 306 DKSSKRVLTADFCAGCKVNDVEAIRSQGLAVHDIAEKLIKAFAEQIFYTGFIHSDPHPGN 365
Query: 494 FFY---DPQQHKVALLDFGATREYDRSFTDLYIQIIRAAADRDRETVRA 539
+ ++ LLD G + + Q+ RA RD +RA
Sbjct: 366 VLVRKGPDGKAELVLLDHGLYQFLEEKDRAALCQLWRAIILRDDAAMRA 414
>gi|217035081 aarF domain containing kinase 1 isoform b [Homo
sapiens]
Length = 455
Score = 75.1 bits (183), Expect = 2e-13
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 18/224 (8%)
Query: 326 DKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQYPGVAQSINSDVNNLMAVLNMSNML 385
D + F++ P AS+ QVH A + GR VA+K+Q+P V + D+ LM VL ++
Sbjct: 76 DLFQSFDDTPLGTASLAQVHKAVLHDGRTVAVKVQHPKVRAQSSKDI-LLMEVLVLA--- 131
Query: 386 PEGLFPEH----LIDVLRRELALECDYQREAACARKFRDLLKGHPFFYVPEIVDELCSPH 441
+ LFPE L+D ++ L LE D+ E A K +L+ F VP I +L +
Sbjct: 132 VKQLFPEFEFMWLVDEAKKNLPLELDFLNEGRNAEKVSQMLRHFDFLKVPRIHWDLSTER 191
Query: 442 VLTTELVSGFPLDQAEGLSQE--IRNEICYNILVLCLRELFEFHFMQTDPNWSNFFYDPQ 499
VL E V G ++ + + + NEI ++ + +F F+ DP+ N
Sbjct: 192 VLLMEFVDGGQVNDRDYMERNKIDVNEISRHLGKMYSEMIFVNGFVHCDPHPGNVLVRKH 251
Query: 500 ----QHKVALLDFG----ATREYDRSFTDLYIQIIRAAADRDRE 535
+ ++ LLD G T E+ ++ L+ +I R +E
Sbjct: 252 PGTGKAEIVLLDHGLYQMLTEEFRLNYCHLWQSLIWTDMKRVKE 295
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 37.0 bits (84), Expect = 0.057
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 15/115 (13%)
Query: 45 STAVEQIGMFLGKVQGQDKHEEYFAENFGGPEGE-FHFSVPHAAGASTDFSSASAPDQSA 103
++ + G F G+ K F+ G + F FS P+ G +AP +
Sbjct: 1924 NSGAKTFGGFASSSFGEQKPTGTFSSGGGSVASQGFGFSSPNKTGGF-----GAAPVFGS 1978
Query: 104 PPSLGHAHSEGPAPAYVASGPFREAGFPGQASSPLGRANGRLFANPRDSFSAMGF 158
PP+ G + G PA+ ++ F +SPLG G++F + SA GF
Sbjct: 1979 PPTFGGSPGFGGVPAFGSAPAF---------TSPLGSTGGKVFGEGTAAASAGGF 2024
>gi|31795544 origin recognition complex, subunit 1 [Homo sapiens]
Length = 861
Score = 34.7 bits (78), Expect = 0.28
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 23/147 (15%)
Query: 253 PFLSEANAERIVRTLC-KVRGAA----LKLGQMLSIQDDAFINPHLAKIFERVRQSADFM 307
P L + R +C K G + +++GQ + I+ D NP++AK+ E +D
Sbjct: 20 PLLDRKLHYQTYREMCVKTEGCSTEIHIQIGQFVLIEGDDDENPYVAKLLELFEDDSDPP 79
Query: 308 PLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQYPGVAQS 367
P K R ++++F F + HL K G + YP +
Sbjct: 80 PKK--------------RARVQWFVR--FCEVPACKRHLLGRKPGAQEIFWYDYPACDSN 123
Query: 368 INSDVNNLMAVLNMSNMLPEGLFPEHL 394
IN++ ++ ++ + + P+ + P +L
Sbjct: 124 INAE--TIIGLVRVIPLAPKDVVPTNL 148
>gi|24430132 WW domain binding protein 2 [Homo sapiens]
Length = 261
Score = 33.1 bits (74), Expect = 0.82
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Query: 69 AENFGGPEGEFHFSVPHAAGASTDFSS-----ASAPDQSAPPSLGHAHSEGPAPAYVASG 123
AE GG EG + + AG + +F AS + PS + +S P+ AYV
Sbjct: 98 AEAGGGWEGSASYKLTFTAGGAIEFGQRMLQVASQASRGEVPSGAYGYSYMPSGAYVYPP 157
Query: 124 PFREAGFPGQASSPLGRANGRLFANPRDSFSAMGF 158
P +P P + P AMG+
Sbjct: 158 PVANGMYPCPPGYPYPPPPPEFYPGPPMMDGAMGY 192
>gi|167614500 lymphocyte-activation protein 3 precursor [Homo
sapiens]
Length = 525
Score = 32.7 bits (73), Expect = 1.1
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Query: 82 SVPHAAGASTDFSSASAPDQSAPPSLGHAHSEGPAPAYVASGPFREAGFPGQASSPLGRA 141
S+ AG + S P +AP GH + GP PA +S R + + P G
Sbjct: 54 SLLRRAGVTWQHQPDSGPPAAAP---GHPLAPGPHPAAPSSWGPRPRRYTVLSVGPGGLR 110
Query: 142 NGRLFANPRDSFSAMGFQRRFF 163
+GRL PR G QR F
Sbjct: 111 SGRLPLQPRVQLDERGRQRGDF 132
>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
isoform a [Homo sapiens]
Length = 1749
Score = 32.7 bits (73), Expect = 1.1
Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 3/99 (3%)
Query: 82 SVPHAAGASTDFSSASAPDQSAPPSLGHAHSEGPAPAYVAS-GPFREAGFPGQASSPLGR 140
S AG+ + S + S PSL E PA A +S P S L R
Sbjct: 968 STAEEAGSQLEGSQSPRSPSSKRPSLHRLGKEKPAMARTSSRAPCSPTSVSDVDSDALSR 1027
Query: 141 ANGRLFANPRDSFSAMGFQRRFFHQDQSPVGGLTAEDIE 179
N + P+ S A Q+ +D+ P GG A D+E
Sbjct: 1028 GNFEVGFRPQRSVKAERAQQPEAGEDRRPAGG--ASDVE 1064
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 32.7 bits (73), Expect = 1.1
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 21/78 (26%)
Query: 61 QDKHEEYFA---ENFGGPEGEFHFSVPHAAGASTDFSSASAPDQSAPPSLGHAHSEGPAP 117
QD+ +F E FGG GA+ D+ A P+ P G GP P
Sbjct: 940 QDEERSFFPTMEEMFGG-------------GAADDYGKAGPPEDEGDPKAGAGPPPGP-P 985
Query: 118 AYVASGPFREAGFPGQAS 135
AY GP+ PG+AS
Sbjct: 986 AYDPYGPY----CPGRAS 999
>gi|197313667 cell division cycle 7 [Homo sapiens]
Length = 574
Score = 32.3 bits (72), Expect = 1.4
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 453 LDQAEGLS-QEIRNEICYNILVLCLRELFEFHFMQTDPNWSNFFYDPQQHKVALLDFGAT 511
LD LS QE+R E N L L+ + +F + D SNF Y+ + K AL+DFG
Sbjct: 143 LDILNSLSFQEVR-EYMLN-LFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLA 200
Query: 512 REYDRSFTDLYIQIIRAAADRDR 534
+ + +L ++ +++ A ++R
Sbjct: 201 QGTHDTKIEL-LKFVQSEAQQER 222
>gi|197313665 cell division cycle 7 [Homo sapiens]
Length = 574
Score = 32.3 bits (72), Expect = 1.4
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 453 LDQAEGLS-QEIRNEICYNILVLCLRELFEFHFMQTDPNWSNFFYDPQQHKVALLDFGAT 511
LD LS QE+R E N L L+ + +F + D SNF Y+ + K AL+DFG
Sbjct: 143 LDILNSLSFQEVR-EYMLN-LFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLA 200
Query: 512 REYDRSFTDLYIQIIRAAADRDR 534
+ + +L ++ +++ A ++R
Sbjct: 201 QGTHDTKIEL-LKFVQSEAQQER 222
>gi|4502715 cell division cycle 7 [Homo sapiens]
Length = 574
Score = 32.3 bits (72), Expect = 1.4
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 453 LDQAEGLS-QEIRNEICYNILVLCLRELFEFHFMQTDPNWSNFFYDPQQHKVALLDFGAT 511
LD LS QE+R E N L L+ + +F + D SNF Y+ + K AL+DFG
Sbjct: 143 LDILNSLSFQEVR-EYMLN-LFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLA 200
Query: 512 REYDRSFTDLYIQIIRAAADRDR 534
+ + +L ++ +++ A ++R
Sbjct: 201 QGTHDTKIEL-LKFVQSEAQQER 222
>gi|148612857 sickle tail isoform 3 [Homo sapiens]
Length = 1309
Score = 32.3 bits (72), Expect = 1.4
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 88 GASTDFSSASAPDQ--SAPPSLGHAHSEGPAPAYVASGPFREAGFPGQASSPLGRANGRL 145
GA S+A P ++PPS HS P+P+ + G R PG A+ P R +
Sbjct: 296 GAPRPGSTAHPPHAIPNSPPSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLP 355
Query: 146 FANPRDSFSAMGFQRRFFHQDQSPVG 171
+ P + +RR D+ G
Sbjct: 356 VSRPISPSPSAILERRDVKPDEDMSG 381
>gi|148612813 sickle tail isoform 2 [Homo sapiens]
Length = 1264
Score = 32.3 bits (72), Expect = 1.4
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 88 GASTDFSSASAPDQ--SAPPSLGHAHSEGPAPAYVASGPFREAGFPGQASSPLGRANGRL 145
GA S+A P ++PPS HS P+P+ + G R PG A+ P R +
Sbjct: 216 GAPRPGSTAHPPHAIPNSPPSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLP 275
Query: 146 FANPRDSFSAMGFQRRFFHQDQSPVG 171
+ P + +RR D+ G
Sbjct: 276 VSRPISPSPSAILERRDVKPDEDMSG 301
>gi|50843820 sickle tail isoform 1 [Homo sapiens]
Length = 1943
Score = 32.3 bits (72), Expect = 1.4
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 88 GASTDFSSASAPDQ--SAPPSLGHAHSEGPAPAYVASGPFREAGFPGQASSPLGRANGRL 145
GA S+A P ++PPS HS P+P+ + G R PG A+ P R +
Sbjct: 296 GAPRPGSTAHPPHAIPNSPPSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDRISSLP 355
Query: 146 FANPRDSFSAMGFQRRFFHQDQSPVG 171
+ P + +RR D+ G
Sbjct: 356 VSRPISPSPSAILERRDVKPDEDMSG 381
>gi|115511036 alpha-kinase 3 [Homo sapiens]
Length = 1907
Score = 32.0 bits (71), Expect = 1.8
Identities = 58/209 (27%), Positives = 79/209 (37%), Gaps = 44/209 (21%)
Query: 76 EGEFHFSVPHAAGASTDFSSAS----APDQSAPPSLGHAHSEGPAPAYVASGPFREAGFP 131
EGE P GAS + S A A Q+AP +GP+ +A P +E FP
Sbjct: 1294 EGEVSPEGPGLLGASQESSMAGRLGEAGGQAAP-------GQGPSAESIAQEPSQEEKFP 1346
Query: 132 GQASSPLGRANGRLFANPRDSFSAMGFQRRFFHQDQSPVG---GLTAEDIEKARQAKARP 188
G+A G A P + A+G +R+ F G T E+ E + P
Sbjct: 1347 GEA------LTGLPAATPEE--LALGARRKRFLPKVRAAGDGEATTPEERESPTVSPRGP 1398
Query: 189 ENKQHKQTLSEHARERKVPVTRIGRLANFGGLAVGLGFGALAEV--AKKSLRSED--PSG 244
+ RER+ P GR A ++ EV A++ L + D PS
Sbjct: 1399 RKSLVPGSPGTPGRERRSPTQ--GRKA------------SMLEVPRAEEELAAGDLGPSP 1444
Query: 245 KKAVLGSSPFLSEANAERIVRTLCKVRGA 273
K L + L E E TL K R A
Sbjct: 1445 KAGGLDTEVALDEGKQE----TLAKPRKA 1469
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 31.6 bits (70), Expect = 2.4
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Query: 86 AAGASTDFSSASAPDQSAPPSLGHAHSEGPAPAYVASGPFREAGFPGQASSPLGRANGRL 145
++ +S+ SS+S+ S S+ A +GP +A P +A+ G+A
Sbjct: 2655 SSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKA---- 2710
Query: 146 FANPRDSFSAMGFQRRFFHQDQSPVGGLTAEDIEKARQ-AKARPENKQ--HKQTLSEHAR 202
R S + G ++ Q Q+P T KA+ AK+RP+ ++ H T E A+
Sbjct: 2711 ----RPSAHSPG-KKTPAPQPQAPPPQPTQPLQPKAQAGAKSRPKKREGVHLPTTKELAK 2765
Query: 203 ERKVP 207
+++P
Sbjct: 2766 RQRLP 2770
>gi|47271475 SPOC domain containing 1 [Homo sapiens]
Length = 1216
Score = 31.6 bits (70), Expect = 2.4
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 29/149 (19%)
Query: 73 GGPEGEFHFSVPHAAGASTDFSSASAPDQSAPPSLGHAHSEGPAPAYVASGPFREAGFPG 132
G P G F VP +G + S+A AP QSA LG A ++ A A R G
Sbjct: 298 GSPCGPVGFPVP--SGGESLSSAAQAPPQSAALCLG-ASAQASAEQQEAVCVVRTGSDEG 354
Query: 133 QA-----------SSPLGRANGRL---FANPRDSFSAMGFQRRFFHQDQSPVGGLTAEDI 178
QA + P R GRL A P D+ ++ + P+GGL++
Sbjct: 355 QAPAQDQEELEAKAQPASR--GRLEQGLAAPADTCAS----------SREPLGGLSSSLD 402
Query: 179 EKARQAKARPENKQHKQTLSEHARERKVP 207
+A +A + P +Q + +++ ++ VP
Sbjct: 403 TEASRACSGPFMEQRRSKGTKNLKKGPVP 431
>gi|169210350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 165
Score = 31.2 bits (69), Expect = 3.1
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 9/102 (8%)
Query: 59 QGQDKHEEYFAENFGGPEGEFHFSVPHAAGASTDFSSASAPDQSAPPSLGHAHSEGPAPA 118
+G+ + +E A +F GP H AGA D +AP + S P A
Sbjct: 53 RGEREADEGEATSFPGP------CAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSA 106
Query: 119 YVASGPFREAGFPGQASSP--LGRANGRL-FANPRDSFSAMG 157
A+ R AG G+ P LGR G + A PR++ S G
Sbjct: 107 RRAAAVARHAGSEGRGWRPPGLGREAGPVGGAEPREAGSIAG 148
>gi|113426339 PREDICTED: hypothetical protein [Homo sapiens]
Length = 165
Score = 31.2 bits (69), Expect = 3.1
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 9/102 (8%)
Query: 59 QGQDKHEEYFAENFGGPEGEFHFSVPHAAGASTDFSSASAPDQSAPPSLGHAHSEGPAPA 118
+G+ + +E A +F GP H AGA D +AP + S P A
Sbjct: 53 RGEREADEGEATSFPGP------CAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSA 106
Query: 119 YVASGPFREAGFPGQASSP--LGRANGRL-FANPRDSFSAMG 157
A+ R AG G+ P LGR G + A PR++ S G
Sbjct: 107 RRAAAVARHAGSEGRGWRPPGLGREAGPVGGAEPREAGSIAG 148
>gi|113426005 PREDICTED: hypothetical protein [Homo sapiens]
Length = 165
Score = 31.2 bits (69), Expect = 3.1
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 9/102 (8%)
Query: 59 QGQDKHEEYFAENFGGPEGEFHFSVPHAAGASTDFSSASAPDQSAPPSLGHAHSEGPAPA 118
+G+ + +E A +F GP H AGA D +AP + S P A
Sbjct: 53 RGEREADEGEATSFPGP------CAAHVAGAPEDEDDEEQAVAAAPHAHTATASPPPGSA 106
Query: 119 YVASGPFREAGFPGQASSP--LGRANGRL-FANPRDSFSAMG 157
A+ R AG G+ P LGR G + A PR++ S G
Sbjct: 107 RRAAAVARHAGSEGRGWRPPGLGREAGPVGGAEPREAGSIAG 148
>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
Length = 1604
Score = 31.2 bits (69), Expect = 3.1
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 83 VPHAAGASTDFSSASAPDQSAPPSLGHAHSEGPAPAYV---ASGPFREAGFPGQAS--SP 137
+P G D A + P G +GP P Y A+GP + G PG P
Sbjct: 1513 LPGTKGEKGDIGIGIAGENGLP---GPPGPQGP-PGYGKMGATGPMGQQGIPGIPGPPGP 1568
Query: 138 LGRANGRLFANPRDSFSAMGFQRRF 162
+G+ NP D F AM ++++
Sbjct: 1569 MGQPGKAGHCNPSDCFGAMPMEQQY 1593
>gi|225543215 antigen identified by monoclonal antibody Ki-67 isoform
2 [Homo sapiens]
Length = 2896
Score = 30.4 bits (67), Expect = 5.3
Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 25/171 (14%)
Query: 87 AGASTDFSSASAPDQSAPPSLGHAHSEGPAPAYVASGPFREAGFPGQASSPLGRANGRLF 146
+G +TD A + +L + + PAPA +G R P +++ + G F
Sbjct: 2386 SGETTDADKEPAGEDKGIKALKESAKQTPAPAASVTGSRRRPRAPRESAQAIEDLAG--F 2443
Query: 147 ANPRDSFSAMGFQRRFFHQDQ-SPVGGLTAEDIE-KARQAKARPENKQHKQTLSEHARER 204
+P A G D+ + + ++ ++E A +K RP + K + E
Sbjct: 2444 KDP-----AAGHTEESMTDDKTTKIPCKSSPELEDTATSSKRRPRTRAQKVEVKEE---- 2494
Query: 205 KVPVTRIGRLANFGG---------LAVGLGFGALAEVAKKSLRSEDPSGKK 246
+ +G+L G + G G A + AK+ L +ED G +
Sbjct: 2495 ---LLAVGKLTQTSGETTHTDKEPVGEGKGTKAFKQPAKRKLDAEDVIGSR 2542
>gi|103472005 antigen identified by monoclonal antibody Ki-67 isoform
1 [Homo sapiens]
Length = 3256
Score = 30.4 bits (67), Expect = 5.3
Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 25/171 (14%)
Query: 87 AGASTDFSSASAPDQSAPPSLGHAHSEGPAPAYVASGPFREAGFPGQASSPLGRANGRLF 146
+G +TD A + +L + + PAPA +G R P +++ + G F
Sbjct: 2746 SGETTDADKEPAGEDKGIKALKESAKQTPAPAASVTGSRRRPRAPRESAQAIEDLAG--F 2803
Query: 147 ANPRDSFSAMGFQRRFFHQDQ-SPVGGLTAEDIE-KARQAKARPENKQHKQTLSEHARER 204
+P A G D+ + + ++ ++E A +K RP + K + E
Sbjct: 2804 KDP-----AAGHTEESMTDDKTTKIPCKSSPELEDTATSSKRRPRTRAQKVEVKEE---- 2854
Query: 205 KVPVTRIGRLANFGG---------LAVGLGFGALAEVAKKSLRSEDPSGKK 246
+ +G+L G + G G A + AK+ L +ED G +
Sbjct: 2855 ---LLAVGKLTQTSGETTHTDKEPVGEGKGTKAFKQPAKRKLDAEDVIGSR 2902
>gi|76781485 vascular endothelial growth factor A isoform f
precursor [Homo sapiens]
Length = 327
Score = 30.4 bits (67), Expect = 5.3
Identities = 37/146 (25%), Positives = 52/146 (35%), Gaps = 10/146 (6%)
Query: 22 AVETHLQHLG---IGGELIMAARALQSTAVEQIGMFLGKVQGQDKHEEYFAENFGGPEGE 78
A++ +Q LG GG ++ A A S A + Q ++ EE E GP+
Sbjct: 51 ALKLFVQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWR 110
Query: 79 FHFSVPHAAGASTDFSSASAPDQSAPPSLGHAHSEGPAPAYVASGPFREAGFPGQASSPL 138
P + + SAP AP +L A G VA E+G P S
Sbjct: 111 LGARKPGSWTGEAAVCADSAPAARAPQALARASGRG---GRVARRGAEESGPPHSPS--- 164
Query: 139 GRANGRLFANPRDSFSAMGFQRRFFH 164
R A P + M F + H
Sbjct: 165 -RRGSASRAGPGRASETMNFLLSWVH 189
>gi|76781484 vascular endothelial growth factor A isoform e
precursor [Homo sapiens]
Length = 354
Score = 30.4 bits (67), Expect = 5.3
Identities = 37/146 (25%), Positives = 52/146 (35%), Gaps = 10/146 (6%)
Query: 22 AVETHLQHLG---IGGELIMAARALQSTAVEQIGMFLGKVQGQDKHEEYFAENFGGPEGE 78
A++ +Q LG GG ++ A A S A + Q ++ EE E GP+
Sbjct: 51 ALKLFVQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWR 110
Query: 79 FHFSVPHAAGASTDFSSASAPDQSAPPSLGHAHSEGPAPAYVASGPFREAGFPGQASSPL 138
P + + SAP AP +L A G VA E+G P S
Sbjct: 111 LGARKPGSWTGEAAVCADSAPAARAPQALARASGRG---GRVARRGAEESGPPHSPS--- 164
Query: 139 GRANGRLFANPRDSFSAMGFQRRFFH 164
R A P + M F + H
Sbjct: 165 -RRGSASRAGPGRASETMNFLLSWVH 189
>gi|76781483 vascular endothelial growth factor A isoform d
precursor [Homo sapiens]
Length = 371
Score = 30.4 bits (67), Expect = 5.3
Identities = 37/146 (25%), Positives = 52/146 (35%), Gaps = 10/146 (6%)
Query: 22 AVETHLQHLG---IGGELIMAARALQSTAVEQIGMFLGKVQGQDKHEEYFAENFGGPEGE 78
A++ +Q LG GG ++ A A S A + Q ++ EE E GP+
Sbjct: 51 ALKLFVQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWR 110
Query: 79 FHFSVPHAAGASTDFSSASAPDQSAPPSLGHAHSEGPAPAYVASGPFREAGFPGQASSPL 138
P + + SAP AP +L A G VA E+G P S
Sbjct: 111 LGARKPGSWTGEAAVCADSAPAARAPQALARASGRG---GRVARRGAEESGPPHSPS--- 164
Query: 139 GRANGRLFANPRDSFSAMGFQRRFFH 164
R A P + M F + H
Sbjct: 165 -RRGSASRAGPGRASETMNFLLSWVH 189
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,093,159
Number of Sequences: 37866
Number of extensions: 1092513
Number of successful extensions: 3728
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 3688
Number of HSP's gapped (non-prelim): 71
length of query: 647
length of database: 18,247,518
effective HSP length: 109
effective length of query: 538
effective length of database: 14,120,124
effective search space: 7596626712
effective search space used: 7596626712
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.