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Search of human proteins with 33695095
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33695095 ras-related GTP-binding protein RAB10 [Homo
sapiens]
(200 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens] 407 e-114
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens] 278 3e-75
gi|16933567 mel transforming oncogene [Homo sapiens] 275 2e-74
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 253 1e-67
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 248 2e-66
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 248 2e-66
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 248 2e-66
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 214 4e-56
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 211 4e-55
gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens] 199 2e-51
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens] 196 1e-50
gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens] 194 3e-50
gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens] 194 4e-50
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens] 194 4e-50
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens] 194 5e-50
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa... 191 5e-49
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens] 189 2e-48
gi|21361884 RAB2B protein isoform 1 [Homo sapiens] 181 4e-46
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens] 178 2e-45
gi|50234889 RAB43 protein [Homo sapiens] 173 1e-43
gi|4758984 Ras-related protein Rab-11A [Homo sapiens] 172 2e-43
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa... 171 4e-43
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens] 171 5e-43
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens] 169 1e-42
gi|10880989 RAB18, member RAS oncogene family [Homo sapiens] 165 3e-41
gi|239915976 RAB19, member RAS oncogene family [Homo sapiens] 163 1e-40
gi|34485711 Ras-related protein Rab-27A [Homo sapiens] 159 1e-39
gi|34485709 Ras-related protein Rab-27A [Homo sapiens] 159 1e-39
gi|34485706 Ras-related protein Rab-27A [Homo sapiens] 159 1e-39
gi|19923264 Ras-related protein Rab-27A [Homo sapiens] 159 1e-39
>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
Length = 200
Score = 407 bits (1046), Expect = e-114
Identities = 200/200 (100%), Positives = 200/200 (100%)
Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GNKCDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
GNKCDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN
Sbjct: 121 GNKCDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180
Query: 181 SENVDISSGGGVTGWKSKCC 200
SENVDISSGGGVTGWKSKCC
Sbjct: 181 SENVDISSGGGVTGWKSKCC 200
>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 278 bits (710), Expect = 3e-75
Identities = 136/195 (69%), Positives = 162/195 (83%)
Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63
KTYD LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T+EL GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123
DTAGQERF TITT+YYRGAMGIMLVYDITN KSF+NI W+RNI+EHA+ DVERM+LGNK
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSEN 183
CDM+DKR V K +G ++A ++GI+F ETSAK++ N+E+AF TLA DI+ K K +S +
Sbjct: 123 CDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNS 182
Query: 184 VDISSGGGVTGWKSK 198
+T +SK
Sbjct: 183 AGAGGPVKITENRSK 197
>gi|16933567 mel transforming oncogene [Homo sapiens]
Length = 207
Score = 275 bits (703), Expect = 2e-74
Identities = 135/179 (75%), Positives = 156/179 (87%), Gaps = 1/179 (0%)
Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63
KTYD LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T+EL GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123
DTAGQERF TITT+YYRGAMGIMLVYDITN KSF+NI W+RNI+EHA+ DVE+M+LGNK
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK-EPNS 181
CD++DKR V K +G ++A ++GI+F ETSAKANIN+E AF TLA DI K K E NS
Sbjct: 123 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNS 181
>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 253 bits (645), Expect = 1e-67
Identities = 120/180 (66%), Positives = 153/180 (85%)
Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TV+++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+ KSFENI W+++I E+A+ VER+LLGNK
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSEN 183
CDM+ KR V K + ++AREHGIRFFETSAK+++N+++AF +LA DIL K+ + + N
Sbjct: 123 CDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGN 182
>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
Length = 327
Score = 248 bits (634), Expect = 2e-66
Identities = 118/180 (65%), Positives = 151/180 (83%)
Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TV+++GKKIKLQ+W
Sbjct: 127 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 186
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123
DTAGQERF TITT+YYRGAMGI+L YDIT+ KSFENI W+++I E+A+ VE +LLGNK
Sbjct: 187 DTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNK 246
Query: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSEN 183
CDM+ KR V K + ++AREHGIRFFETSAK+++N+++AF +LA DIL K+ + + N
Sbjct: 247 CDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGN 306
>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 248 bits (634), Expect = 2e-66
Identities = 118/180 (65%), Positives = 151/180 (83%)
Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TV+++GKKIKLQ+W
Sbjct: 127 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 186
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123
DTAGQERF TITT+YYRGAMGI+L YDIT+ KSFENI W+++I E+A+ VE +LLGNK
Sbjct: 187 DTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNK 246
Query: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSEN 183
CDM+ KR V K + ++AREHGIRFFETSAK+++N+++AF +LA DIL K+ + + N
Sbjct: 247 CDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGN 306
>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 248 bits (634), Expect = 2e-66
Identities = 118/180 (65%), Positives = 151/180 (83%)
Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TV+++GKKIKLQ+W
Sbjct: 127 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 186
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123
DTAGQERF TITT+YYRGAMGI+L YDIT+ KSFENI W+++I E+A+ VE +LLGNK
Sbjct: 187 DTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNK 246
Query: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSEN 183
CDM+ KR V K + ++AREHGIRFFETSAK+++N+++AF +LA DIL K+ + + N
Sbjct: 247 CDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGN 306
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 214 bits (545), Expect = 4e-56
Identities = 99/168 (58%), Positives = 134/168 (79%)
Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65
YD LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+EL GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL+ ID +A+E+V ++L+GNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 MDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173
+ K+VV + A GI F ETSAK N+E++F+T+A +I ++
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKR 175
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 211 bits (536), Expect = 4e-55
Identities = 98/168 (58%), Positives = 133/168 (79%)
Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65
YD LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+EL GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +S+ N+ +WL+ ID +A+E+V ++L+GNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSD 124
Query: 126 MDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173
+ K+VV + A GI F ETSAK N+E+AF+T+A +I ++
Sbjct: 125 LTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKR 172
>gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]
Length = 219
Score = 199 bits (505), Expect = 2e-51
Identities = 97/193 (50%), Positives = 135/193 (69%), Gaps = 6/193 (3%)
Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
A + +D +FKLLLIG+S VGKT LFR++DD+F F+ST+GIDFK+KTV K+IKLQ
Sbjct: 15 ADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQ 74
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
IWDTAGQER+ TITT+YYRGAMG +L+YDI N +SF + W I ++ ++ + +L+G
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVG 134
Query: 122 NKCDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNS 181
NKCD++D+RVVP G ++A + G FFE SAK NIN+++ F L + I K +
Sbjct: 135 NKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKM------N 188
Query: 182 ENVDISSGGGVTG 194
E+++ SS G G
Sbjct: 189 ESLEPSSSSGSNG 201
>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
Length = 220
Score = 196 bits (498), Expect = 1e-50
Identities = 97/193 (50%), Positives = 136/193 (70%), Gaps = 7/193 (3%)
Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63
+ +D +FK+L+IG+S VGKT LFR++DD+F F+ST+GIDFK+KT+ K+IKLQIW
Sbjct: 17 QNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIW 76
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123
DTAGQER+ TITT+YYRGAMG +L+YDITN +SF + W I ++ ++ + +L+GNK
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNK 136
Query: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSEN 183
CDM+D+RVV +G Q+A G FFE SAK NIN+++ F L + I K SE+
Sbjct: 137 CDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKM------SES 190
Query: 184 VDISSGGGVTGWK 196
+D ++ VTG K
Sbjct: 191 LD-TADPAVTGAK 202
>gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]
Length = 219
Score = 194 bits (494), Expect = 3e-50
Identities = 91/170 (53%), Positives = 125/170 (73%)
Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63
+ +D +FKLL+IG+S VGKT LFR++DD F F+ST+GIDFK+KTV K++KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIW 76
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123
DTAGQER+ TITT+YYRGAMG +L+YDITN +SF + W I ++ ++ + +L+GNK
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNK 136
Query: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173
CDM+++RVVP KG +A + G FFE SAK NI++ +AF L + I K
Sbjct: 137 CDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDK 186
>gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]
Length = 227
Score = 194 bits (493), Expect = 4e-50
Identities = 90/170 (52%), Positives = 126/170 (74%)
Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63
+ +D +FKLL+IG+S VGKT LFR++DD+F + F+ST+GIDFK+KTV K+IKLQIW
Sbjct: 25 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIW 84
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123
DTAGQER+ TITT+YYRGAMG +L+YDITN +SF + W I ++ ++ + +L+GNK
Sbjct: 85 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNK 144
Query: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173
CDM+D+RV+ +G + + G FFETSAK NIN+++ F L + I K
Sbjct: 145 CDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDK 194
>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 194 bits (493), Expect = 4e-50
Identities = 95/200 (47%), Positives = 142/200 (71%), Gaps = 4/200 (2%)
Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63
+ YD LFKLL+IGDSGVGK+ +L RF+D+ F+ ++I+TIG+DFKI+TVE+ G+K+KLQIW
Sbjct: 3 RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123
DTAGQERF TIT++YYRG G+++VYD+T+ +SF N+ +WL I+++ +DV R+L+GNK
Sbjct: 63 DTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNK 121
Query: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP---VKEPN 180
D +++VV + A + GI+ FETSAK N+N+E+ F + E +LR K+
Sbjct: 122 NDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQ 181
Query: 181 SENVDISSGGGVTGWKSKCC 200
+ D+ + K +CC
Sbjct: 182 QQQNDVVKLTKNSKRKKRCC 201
>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
Length = 256
Score = 194 bits (492), Expect = 5e-50
Identities = 95/196 (48%), Positives = 135/196 (68%), Gaps = 2/196 (1%)
Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNT-TFISTIGIDFKIKTVELQGKKIKLQIWD 64
YD+ FK++L+GDSGVGKTC+L RF D AF TFIST+GIDF+ K +++ G K+KLQ+WD
Sbjct: 60 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWD 119
Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKC 124
TAGQERF ++T +YYR A ++L+YD+TN SF+NI WL I E+A DV MLLGNK
Sbjct: 120 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKV 179
Query: 125 DMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENV 184
D +RVV + G ++A+E+G+ F ETSAK +N++ AF +A++ L++ +K P+
Sbjct: 180 DSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKE-LKQRSMKAPSEPRF 238
Query: 185 DISSGGGVTGWKSKCC 200
+ G + CC
Sbjct: 239 RLHDYVKREGRGASCC 254
>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
sapiens]
Length = 223
Score = 191 bits (484), Expect = 5e-49
Identities = 91/167 (54%), Positives = 123/167 (73%), Gaps = 1/167 (0%)
Query: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAF-NTTFISTIGIDFKIKTVELQGKKIKLQIW 63
+YDL K++L+GD+GVGKTC L +F D AF + TFI+T+GIDF+ K V + G ++KLQIW
Sbjct: 25 SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123
DTAGQERF ++T +YYR A ++L+YDITN SF+NI WL I E+A DV MLLGNK
Sbjct: 85 DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
Query: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170
DM +RV+ G +ARE+G+ F ETSAK +N+E AFL +A+++
Sbjct: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 191
>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
Length = 244
Score = 189 bits (479), Expect = 2e-48
Identities = 89/171 (52%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66
D ++++IG GVGKT ++ RF+DD F ST+G+DFKIKTVEL+GKKI+LQIWDTA
Sbjct: 40 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTA 99
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDM 126
GQERF++IT++YYR A GI+LVYDIT ++F+++ KW++ ID++A+ED E +L+GNK D
Sbjct: 100 GQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDC 159
Query: 127 DDKRVVPKGKGGQIARE-HGIRFFETSAKANINIEKAFLTLAEDILRKTPV 176
+ R + + +G + A++ G+RF E SAK N N+++ FL L +DIL+K P+
Sbjct: 160 ETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPL 210
>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
Length = 216
Score = 181 bits (459), Expect = 4e-46
Identities = 84/169 (49%), Positives = 121/169 (71%)
Query: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
TY LFK ++IGD+GVGK+C+L +F+D F TIG++F + V + GK+IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKC 124
TAGQE F +IT SYYRGA G +LVYDIT ++F +++ WL + +H++ ++ ML+GNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKS 121
Query: 125 DMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173
D++ +R V + +G AREHG+ F ETSAK N+E+AF+ A++I RK
Sbjct: 122 DLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 170
>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 178 bits (452), Expect = 2e-45
Identities = 83/168 (49%), Positives = 118/168 (70%)
Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65
Y LFK ++IGD+GVGK+C+L +F+D F TIG++F + + + GK+IKLQIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125
AGQE F +IT SYYRGA G +LVYDIT +F +++ WL + +H+N ++ ML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
Query: 126 MDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173
++ +R V K +G AREHG+ F ETSAK N+E+AF+ A++I K
Sbjct: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK 170
>gi|50234889 RAB43 protein [Homo sapiens]
Length = 212
Score = 173 bits (438), Expect = 1e-43
Identities = 87/198 (43%), Positives = 130/198 (65%), Gaps = 4/198 (2%)
Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65
YD LFKL+L+GD+ VGKTCV+ RF AF+ STIG+DF +KT+E+QGK++KLQIWDT
Sbjct: 15 YDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDT 74
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125
AGQERF TIT SYYR A G +L YDIT SF ++ W+ ++ ++A ++ ++L+GNK D
Sbjct: 75 AGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSD 134
Query: 126 MDDKRVVPKGKGGQIAREHGIR-FFETSAKANINIEKAFLTLAEDILRK---TPVKEPNS 181
+ + R V + +A + I ETSAK + N+E+AFL +A +++ + E +
Sbjct: 135 LSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHGGPLFSEKSP 194
Query: 182 ENVDISSGGGVTGWKSKC 199
+++ ++S GW C
Sbjct: 195 DHIQLNSKDIGEGWGCGC 212
>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
Length = 216
Score = 172 bits (435), Expect = 2e-43
Identities = 81/173 (46%), Positives = 120/173 (69%)
Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65
YD LFK++LIGDSGVGK+ +L RF+ + FN STIG++F +++++ GK IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125
AGQER+ IT++YYRGA+G +LVYDI ++EN+ +WL+ + +HA+ ++ ML+GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 126 MDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
+ R VP + A ++G+ F ETSA + N+E AF T+ +I R K+
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ 180
>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
sapiens]
Length = 216
Score = 171 bits (433), Expect = 4e-43
Identities = 84/164 (51%), Positives = 114/164 (69%), Gaps = 1/164 (0%)
Query: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNT-TFISTIGIDFKIKTVELQGKKIKLQIWDTA 66
+L K +L+GDSGVGKT +L +F F +F +T+GI F K V + G ++KLQIWDTA
Sbjct: 21 VLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTA 80
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDM 126
GQERF ++T +YYR A ++L+YDITN SF+NI WL I E+A DV MLLGNK DM
Sbjct: 81 GQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADM 140
Query: 127 DDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170
+RV+ G +ARE+G+ F ETSAK +N+E AFL +A+++
Sbjct: 141 SSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 184
>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 171 bits (432), Expect = 5e-43
Identities = 88/208 (42%), Positives = 130/208 (62%), Gaps = 13/208 (6%)
Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65
YD LFK++LIGDSGVGK+ +L RF+ + FN STIG++F +++++ GK IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125
AGQER+ IT++YYRGA+G +LVYDI ++EN+ +WL+ + +HA+ ++ ML+GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 126 MDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE------- 178
+ R VP + A ++ + F ETSA + N+E+AF + +I R K+
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAH 187
Query: 179 ---PNSENVDISSGGGVTGWKS---KCC 200
P + VDIS G K +CC
Sbjct: 188 DESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 169 bits (428), Expect = 1e-42
Identities = 82/167 (49%), Positives = 119/167 (71%)
Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
M+ + YD LFK++LIG++GVGKTC++ RF+ F +TIG+DF IKTVE+ G+K+KL
Sbjct: 1 MSMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
QIWDTAGQERF +IT SYYR A ++L YDIT +SF + +WLR I+++A+ V +L+
Sbjct: 61 QIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLV 120
Query: 121 GNKCDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLA 167
GNK D+ ++R V + + + + + + ETSAK + N+EK FL LA
Sbjct: 121 GNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLA 167
>gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]
Length = 206
Score = 165 bits (417), Expect = 3e-41
Identities = 83/192 (43%), Positives = 121/192 (63%), Gaps = 9/192 (4%)
Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70
K+L+IG+SGVGK+ +L RF+DD F+ +TIG+DFK+KT+ + G K KL IWDTAGQER
Sbjct: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69
Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH-ANEDVERMLLGNKCDMDDK 129
F T+T SYYRGA G++LVYD+T +F + WL ++ + D+ ML+GNK D ++
Sbjct: 70 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKEN- 128
Query: 130 RVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDI--- 186
R V + +G + AR+H + F E SAK ++ AF L E I++ + E ++N +
Sbjct: 129 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKLS 188
Query: 187 ----SSGGGVTG 194
GGG G
Sbjct: 189 HREEGQGGGACG 200
>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
Length = 217
Score = 163 bits (412), Expect = 1e-40
Identities = 76/173 (43%), Positives = 119/173 (68%), Gaps = 1/173 (0%)
Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
A + +D LFK++LIGDS VGKTCV+ F + T +TIG+DF ++++++ GKK+K+Q
Sbjct: 10 ADENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQ 69
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
+WDTAGQERF TIT SYYR A ++ YD+T +FE+I W+ I+++ +V ML+G
Sbjct: 70 VWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIG 129
Query: 122 NKCDMDDKRVVPKGKGGQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRK 173
NKCD+ +KR V +A ++G + ETSAK + NIE+ F+ +A++++ +
Sbjct: 130 NKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIAR 182
>gi|34485711 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 159 bits (403), Expect = 1e-39
Identities = 80/184 (43%), Positives = 124/184 (67%), Gaps = 11/184 (5%)
Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ------ 54
M+ YD L K L +GDSGVGKT VL++++D FN+ FI+T+GIDF+ K V +
Sbjct: 1 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG 60
Query: 55 ----GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH 110
G++I LQ+WDTAGQERF ++TT+++R AMG +L++D+TN +SF N+ W+ + H
Sbjct: 61 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH 120
Query: 111 AN-EDVERMLLGNKCDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAED 169
A E+ + +L GNK D++D+RVV + + +A ++GI +FETSA NI +A L +
Sbjct: 121 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL 180
Query: 170 ILRK 173
I+++
Sbjct: 181 IMKR 184
>gi|34485709 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 159 bits (403), Expect = 1e-39
Identities = 80/184 (43%), Positives = 124/184 (67%), Gaps = 11/184 (5%)
Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ------ 54
M+ YD L K L +GDSGVGKT VL++++D FN+ FI+T+GIDF+ K V +
Sbjct: 1 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG 60
Query: 55 ----GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH 110
G++I LQ+WDTAGQERF ++TT+++R AMG +L++D+TN +SF N+ W+ + H
Sbjct: 61 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH 120
Query: 111 AN-EDVERMLLGNKCDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAED 169
A E+ + +L GNK D++D+RVV + + +A ++GI +FETSA NI +A L +
Sbjct: 121 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL 180
Query: 170 ILRK 173
I+++
Sbjct: 181 IMKR 184
>gi|34485706 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 159 bits (403), Expect = 1e-39
Identities = 80/184 (43%), Positives = 124/184 (67%), Gaps = 11/184 (5%)
Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ------ 54
M+ YD L K L +GDSGVGKT VL++++D FN+ FI+T+GIDF+ K V +
Sbjct: 1 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG 60
Query: 55 ----GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH 110
G++I LQ+WDTAGQERF ++TT+++R AMG +L++D+TN +SF N+ W+ + H
Sbjct: 61 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH 120
Query: 111 AN-EDVERMLLGNKCDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAED 169
A E+ + +L GNK D++D+RVV + + +A ++GI +FETSA NI +A L +
Sbjct: 121 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL 180
Query: 170 ILRK 173
I+++
Sbjct: 181 IMKR 184
>gi|19923264 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 159 bits (403), Expect = 1e-39
Identities = 80/184 (43%), Positives = 124/184 (67%), Gaps = 11/184 (5%)
Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ------ 54
M+ YD L K L +GDSGVGKT VL++++D FN+ FI+T+GIDF+ K V +
Sbjct: 1 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG 60
Query: 55 ----GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH 110
G++I LQ+WDTAGQERF ++TT+++R AMG +L++D+TN +SF N+ W+ + H
Sbjct: 61 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH 120
Query: 111 AN-EDVERMLLGNKCDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAED 169
A E+ + +L GNK D++D+RVV + + +A ++GI +FETSA NI +A L +
Sbjct: 121 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL 180
Query: 170 ILRK 173
I+++
Sbjct: 181 IMKR 184
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,981,215
Number of Sequences: 37866
Number of extensions: 267031
Number of successful extensions: 1078
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 672
Number of HSP's gapped (non-prelim): 275
length of query: 200
length of database: 18,247,518
effective HSP length: 97
effective length of query: 103
effective length of database: 14,574,516
effective search space: 1501175148
effective search space used: 1501175148
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.