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Search of human proteins with 33667038
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33667038 syntaxin 11 [Homo sapiens]
(287 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33667038 syntaxin 11 [Homo sapiens] 571 e-163
gi|49258196 syntaxin 19 [Homo sapiens] 217 1e-56
gi|16418379 syntaxin 1B [Homo sapiens] 174 6e-44
gi|37577287 syntaxin 2 isoform 1 [Homo sapiens] 169 3e-42
gi|37577162 syntaxin 2 isoform 2 [Homo sapiens] 169 3e-42
gi|4759182 syntaxin 1A (brain) [Homo sapiens] 154 7e-38
gi|4759184 syntaxin 3 [Homo sapiens] 144 9e-35
gi|20149560 syntaxin 4 [Homo sapiens] 118 5e-27
gi|28933465 syntaxin 12 [Homo sapiens] 54 2e-07
gi|170932494 syntaxin 7 [Homo sapiens] 50 2e-06
gi|47778943 syntaxin 16 isoform a [Homo sapiens] 48 9e-06
gi|198041692 syntaxin 16 isoform d [Homo sapiens] 48 9e-06
gi|198041688 syntaxin 16 isoform c [Homo sapiens] 48 9e-06
gi|34447229 syntaxin 16 isoform b [Homo sapiens] 48 9e-06
gi|223972648 t-SNARE domain containing 1 [Homo sapiens] 39 0.007
gi|55770834 centromere protein F [Homo sapiens] 39 0.007
gi|4505489 ornithine decarboxylase 1 [Homo sapiens] 37 0.020
gi|13540600 nudE nuclear distribution gene E homolog (A. nidulan... 37 0.026
gi|71284108 nudE nuclear distribution gene E homolog (A. nidulan... 37 0.026
gi|118498362 kinectin 1 isoform b [Homo sapiens] 36 0.034
gi|118498356 kinectin 1 isoform a [Homo sapiens] 36 0.034
gi|33620775 kinectin 1 isoform a [Homo sapiens] 36 0.034
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 35 0.099
gi|61966741 TMF regulated nuclear protein [Homo sapiens] 35 0.099
gi|95089461 discs large homolog 5 [Homo sapiens] 34 0.13
gi|109659847 filamin A interacting protein 1-like isoform 3 [Hom... 34 0.17
gi|109659845 filamin A interacting protein 1-like isoform 1 [Hom... 34 0.17
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 34 0.17
gi|75750474 spectrin domain with coiled-coils 1 NSP5a3b [Homo sa... 33 0.29
gi|75750468 spectrin domain with coiled-coils 1 NSP5a3a [Homo sa... 33 0.29
>gi|33667038 syntaxin 11 [Homo sapiens]
Length = 287
Score = 571 bits (1471), Expect = e-163
Identities = 287/287 (100%), Positives = 287/287 (100%)
Query: 1 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA 60
MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA
Sbjct: 1 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA 60
Query: 61 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP 120
DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP
Sbjct: 61 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP 120
Query: 121 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM 180
HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM
Sbjct: 121 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM 180
Query: 181 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD 240
FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD
Sbjct: 181 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD 240
Query: 241 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK 287
TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK
Sbjct: 241 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK 287
>gi|49258196 syntaxin 19 [Homo sapiens]
Length = 294
Score = 217 bits (552), Expect = 1e-56
Identities = 108/291 (37%), Positives = 184/291 (63%), Gaps = 7/291 (2%)
Query: 1 MKDRLAEL------LDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDE 54
MKDRL EL ++LS+ + +++ + +++E + + E +I+ +Q+
Sbjct: 1 MKDRLQELKQRTKEIELSRDSHVSTTETEEQGVFLQQAVIYEREPVAERHLHEIQKLQES 60
Query: 55 NQLLVADVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAA 114
L +V++ G+Q + SMRR S +KR++ +I K IK + E I+ L + + + +
Sbjct: 61 INNLADNVQKFGQQQKSLVASMRRFSLLKRES-TITKEIKIQAEYINRSLNDLVKEVKKS 119
Query: 115 EAQHGPHSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSG 174
E ++GP S V RI ++Q+ A+ FQ+ M YN +++ CK I RQLE+ GKE+S
Sbjct: 120 EVENGPSSVVTRILKSQHAAMFRHFQQIMFIYNDTIAAKQEKCKTFILRQLEVAGKEMSE 179
Query: 175 DQIEDMFEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVL 234
+ + DM QGKW+VF+E+LL ++ +A L+EIE RH+EL+ LE++I+D+ +LF+Q+++L
Sbjct: 180 EDVNDMLHQGKWEVFNESLLTEINITKAQLSEIEQRHKELVNLENQIKDLRDLFIQISLL 239
Query: 235 VEKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPC 285
VE+Q +++N IE+ V T +Y K + AV+Y+++NPCR LCC+CCPC
Sbjct: 240 VEEQGESINNIEMTVNSTKEYVNNTKEKFGLAVKYKKRNPCRVLCCWCCPC 290
>gi|16418379 syntaxin 1B [Homo sapiens]
Length = 288
Score = 174 bits (442), Expect = 6e-44
Identities = 98/287 (34%), Positives = 163/287 (56%), Gaps = 14/287 (4%)
Query: 1 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA 60
MKDR EL + D DDE + H D DH ++ + + +I+ + L
Sbjct: 1 MKDRTQEL--------RSAKDSDDEEEVVHVD----RDHFMDEFFEQVEEIRGCIEKLSE 48
Query: 61 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP 120
DV+++ KQ++ L + K++ + IK + KL+A+++ E E +
Sbjct: 49 DVEQVKKQHSAILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRS 108
Query: 121 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM 180
SA RI + Q++ L+ F M +YN + K RD CK RIQRQLEI G+ + +++EDM
Sbjct: 109 -SADLRIRKTQHSTLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDM 167
Query: 181 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD 240
E GK +F++++ D + + ALNEIE+RH E+++LE+ IR++H++F+ MA+LVE Q +
Sbjct: 168 LESGKLAIFTDDIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGE 227
Query: 241 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEK-NPCRTLCCFCCPCL 286
++ IE NV+ +VDY +A + +KAV+Y+ K + + CC L
Sbjct: 228 MIDRIEYNVEHSVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVL 274
>gi|37577287 syntaxin 2 isoform 1 [Homo sapiens]
Length = 287
Score = 169 bits (428), Expect = 3e-42
Identities = 94/283 (33%), Positives = 159/283 (56%), Gaps = 13/283 (4%)
Query: 1 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA 60
M+DRL +L K DGD +V E DH ++ + + +I++ +
Sbjct: 1 MRDRLPDLTACRKN-----DDGDTV-------VVVEKDHFMDDFFHQVEEIRNSIDKITQ 48
Query: 61 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP 120
V+ + K ++ L++ IK + + K IK I KL+A+++ + E+ +
Sbjct: 49 YVEEVKKNHSIILSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQSFDQDESGNRT 108
Query: 121 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM 180
S RI R Q++ L+ F AM +YN+A+ R+ K RIQRQLEI G+ + D++E+M
Sbjct: 109 -SVDLRIRRTQHSVLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTDDELEEM 167
Query: 181 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD 240
E GK +F+ ++++D + R ALNEIESRH+++++LE+ IR++HE+F+ MA+ VE Q +
Sbjct: 168 LESGKPSIFTSDIISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGE 227
Query: 241 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCC 283
+N IE NV DY AK + +KA++Y+ K + + C
Sbjct: 228 MINNIERNVMNATDYVEHAKEETKKAIKYQSKARRKLMFIIIC 270
>gi|37577162 syntaxin 2 isoform 2 [Homo sapiens]
Length = 288
Score = 169 bits (427), Expect = 3e-42
Identities = 93/272 (34%), Positives = 156/272 (57%), Gaps = 13/272 (4%)
Query: 1 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA 60
M+DRL +L K DGD +V E DH ++ + + +I++ +
Sbjct: 1 MRDRLPDLTACRKN-----DDGDTV-------VVVEKDHFMDDFFHQVEEIRNSIDKITQ 48
Query: 61 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP 120
V+ + K ++ L++ IK + + K IK I KL+A+++ + E+ +
Sbjct: 49 YVEEVKKNHSIILSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQSFDQDESGNRT 108
Query: 121 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM 180
S RI R Q++ L+ F AM +YN+A+ R+ K RIQRQLEI G+ + D++E+M
Sbjct: 109 -SVDLRIRRTQHSVLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTDDELEEM 167
Query: 181 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD 240
E GK +F+ ++++D + R ALNEIESRH+++++LE+ IR++HE+F+ MA+ VE Q +
Sbjct: 168 LESGKPSIFTSDIISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGE 227
Query: 241 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEK 272
+N IE NV DY AK + +KA++Y+ K
Sbjct: 228 MINNIERNVMNATDYVEHAKEETKKAIKYQSK 259
>gi|4759182 syntaxin 1A (brain) [Homo sapiens]
Length = 288
Score = 154 bits (390), Expect = 7e-38
Identities = 87/287 (30%), Positives = 155/287 (54%), Gaps = 13/287 (4%)
Query: 1 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA 60
MKDR EL + D DD+ D + + D ++ + + +I+ +
Sbjct: 1 MKDRTQEL--------RTAKDSDDDDDVA---VTVDRDRFMDEFFEQVEEIRGFIDKIAE 49
Query: 61 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP 120
+V+ + ++++ L S K + + IK + KL+++++ E E +
Sbjct: 50 NVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRS 109
Query: 121 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM 180
SA RI + Q++ L+ F M +YN + R+ CK RIQRQLEI G+ + +++EDM
Sbjct: 110 -SADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDM 168
Query: 181 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD 240
E G +F+ ++ D ++ AL+EIE+RH E+++LE+ IR++H++F+ MA+LVE Q +
Sbjct: 169 LESGNPAIFASGIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGE 228
Query: 241 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEK-NPCRTLCCFCCPCL 286
++ IE NV+ VDY +A + +KAV+Y+ K + + CC L
Sbjct: 229 MIDRIEYNVEHAVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVIL 275
>gi|4759184 syntaxin 3 [Homo sapiens]
Length = 289
Score = 144 bits (363), Expect = 9e-35
Identities = 89/272 (32%), Positives = 158/272 (58%), Gaps = 13/272 (4%)
Query: 1 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA 60
MKDRL +L +KQ Q DD+ D+ +I + ++ + +I + + +
Sbjct: 1 MKDRLEQLK--AKQLTQ-----DDDTDAV--EIAIDNTAFMDEFFSEIEETRLNIDKISE 51
Query: 61 DVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGP 120
V+ K + L++ K D + IK R + KL++M++ E E +
Sbjct: 52 HVEEAKKLYSIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRS-- 109
Query: 121 HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM 180
SA RI ++Q++ L+ F M YN+A++ R+ K RIQRQLEI GK+ + +++E+M
Sbjct: 110 -SADLRIRKSQHSVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEM 168
Query: 181 FEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQAD 240
E G +F+ ++ D + ++ AL+EIE RH++++RLES I+++H++F+ +A+LVE Q +
Sbjct: 169 LESGNPAIFTSGII-DSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGE 227
Query: 241 TLNVIELNVQKTVDYTGQAKAQVRKAVQYEEK 272
L+ IELNV TVD+ +A+ + +KAV+Y+ +
Sbjct: 228 MLDNIELNVMHTVDHVEKARDETKKAVKYQSQ 259
>gi|20149560 syntaxin 4 [Homo sapiens]
Length = 297
Score = 118 bits (296), Expect = 5e-27
Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 16/278 (5%)
Query: 1 MKDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHIL-----ESLYRDIRDIQDEN 55
M+DR EL +Q D DE D +V E + +R I+
Sbjct: 1 MRDRTHEL--------RQGDDSSDEEDKERVALVVHPGTARLGSPDEEFFHKVRTIRQTI 52
Query: 56 QLLVADVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAE 115
L V+ L KQ L + S+K++ ++ IK G I +L+A++ E A+
Sbjct: 53 VKLGNKVQELEKQQVTILATPLPEESMKQELQNLRDEIKQLGREIRLQLKAIEPQKEEAD 112
Query: 116 AQHGPHSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKE-VSG 174
+ +S R+ + Q+ L+ F ++ N + + R+ RI+RQL+I VS
Sbjct: 113 ENY--NSVNTRMRKTQHGVLSQQFVELINKCNSMQSEYREKNVERIRRQLKITNAGMVSD 170
Query: 175 DQIEDMFEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVL 234
+++E M + G+ +VF N+L D + R ALNEI +RH E+ +LE IR++H++F +A
Sbjct: 171 EELEQMLDSGQSEVFVSNILKDTQVTRQALNEISARHSEIQQLERSIRELHDIFTFLATE 230
Query: 235 VEKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQYEEK 272
VE Q + +N IE N+ + DY + + V+ A++ ++K
Sbjct: 231 VEMQGEMINRIEKNILSSADYVERGQEHVKTALENQKK 268
>gi|28933465 syntaxin 12 [Homo sapiens]
Length = 276
Score = 53.5 bits (127), Expect = 2e-07
Identities = 49/235 (20%), Positives = 108/235 (45%), Gaps = 15/235 (6%)
Query: 48 IRDIQDENQLLVADVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAM 107
+RD Q +++R+ + A+ M +L + K+D++ + + ++ ++ H +
Sbjct: 19 LRDFSSIIQTCSGNIQRISQATAQIKNLMSQLGT-KQDSSKLQENLQ---QLQHSTNQLA 74
Query: 108 KE----LSEAAEAQHGPHSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQR 163
KE L E ++ R R Q L F A++++ + + + K I R
Sbjct: 75 KETNELLKELGSLPLPLSTSEQRQQRLQKERLMNDFSAALNNFQAVQRRVSEKEKESIAR 134
Query: 164 QLEIMGKEVSGDQIEDMFEQGKWDVFSENLLADVKGARAALNE-----IESRHRELLRLE 218
G +S ++ + + +D E + A+ E I+ R + +LE
Sbjct: 135 ARA--GSRLSAEERQREEQLVSFDSHEEWNQMQSQEDEVAITEQDLELIKERETAIRQLE 192
Query: 219 SRIRDVHELFLQMAVLVEKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKN 273
+ I DV+++F +A+++ Q D ++ IE NV+ + + +A Q+++A Y++K+
Sbjct: 193 ADILDVNQIFKDLAMMIHDQGDLIDSIEANVESSEVHVERATEQLQRAAYYQKKS 247
>gi|170932494 syntaxin 7 [Homo sapiens]
Length = 261
Score = 50.1 bits (118), Expect = 2e-06
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 204 LNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQADTLNVIELNVQKTVDYTGQAKAQV 263
L I R + +LE+ I D++E+F + +++ +Q D ++ IE NV+ + QA Q+
Sbjct: 165 LRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQANQQL 224
Query: 264 RKAVQYEEKNPCRTLC 279
+A Y+ K+ +TLC
Sbjct: 225 SRAADYQRKSR-KTLC 239
>gi|47778943 syntaxin 16 isoform a [Homo sapiens]
Length = 325
Score = 48.1 bits (113), Expect = 9e-06
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 25/225 (11%)
Query: 61 DVKRLGKQNARFLTSMR-------RLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEA 113
DV R+ KQ + L S+ L + ++I + ++ H RA++ L
Sbjct: 88 DVGRI-KQKMKELASLHDKHLNRPTLDDSSEEEHAIEITTQEITQLFHRCQRAVQALPSR 146
Query: 114 AEA---QHGP--HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIM 168
A A Q G + VA +++A L+ +F+ A Y +K+ N + R Q +
Sbjct: 147 ARACSEQEGRLLGNVVASLAQA-LQELSTSFRHAQSGY----LKRMKNREERSQHFFDTS 201
Query: 169 GKEVSGDQIEDMFEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELF 228
+ ++ +G F+E+ L V+ +E R RE+ ++ I D++E+F
Sbjct: 202 VPLMDDGDDNTLYHRG----FTEDQLVLVEQNTLM---VEEREREIRQIVQSISDLNEIF 254
Query: 229 LQMAVLVEKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKN 273
+ ++ +Q L+ I+ NV+++ T Q+ KA QY++KN
Sbjct: 255 RDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKN 299
>gi|198041692 syntaxin 16 isoform d [Homo sapiens]
Length = 308
Score = 48.1 bits (113), Expect = 9e-06
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 25/225 (11%)
Query: 61 DVKRLGKQNARFLTSMR-------RLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEA 113
DV R+ KQ + L S+ L + ++I + ++ H RA++ L
Sbjct: 71 DVGRI-KQKMKELASLHDKHLNRPTLDDSSEEEHAIEITTQEITQLFHRCQRAVQALPSR 129
Query: 114 AEA---QHGP--HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIM 168
A A Q G + VA +++A L+ +F+ A Y +K+ N + R Q +
Sbjct: 130 ARACSEQEGRLLGNVVASLAQA-LQELSTSFRHAQSGY----LKRMKNREERSQHFFDTS 184
Query: 169 GKEVSGDQIEDMFEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELF 228
+ ++ +G F+E+ L V+ +E R RE+ ++ I D++E+F
Sbjct: 185 VPLMDDGDDNTLYHRG----FTEDQLVLVEQNTLM---VEEREREIRQIVQSISDLNEIF 237
Query: 229 LQMAVLVEKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKN 273
+ ++ +Q L+ I+ NV+++ T Q+ KA QY++KN
Sbjct: 238 RDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKN 282
>gi|198041688 syntaxin 16 isoform c [Homo sapiens]
Length = 321
Score = 48.1 bits (113), Expect = 9e-06
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 25/225 (11%)
Query: 61 DVKRLGKQNARFLTSMR-------RLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEA 113
DV R+ KQ + L S+ L + ++I + ++ H RA++ L
Sbjct: 84 DVGRI-KQKMKELASLHDKHLNRPTLDDSSEEEHAIEITTQEITQLFHRCQRAVQALPSR 142
Query: 114 AEA---QHGP--HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIM 168
A A Q G + VA +++A L+ +F+ A Y +K+ N + R Q +
Sbjct: 143 ARACSEQEGRLLGNVVASLAQA-LQELSTSFRHAQSGY----LKRMKNREERSQHFFDTS 197
Query: 169 GKEVSGDQIEDMFEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELF 228
+ ++ +G F+E+ L V+ +E R RE+ ++ I D++E+F
Sbjct: 198 VPLMDDGDDNTLYHRG----FTEDQLVLVEQNTLM---VEEREREIRQIVQSISDLNEIF 250
Query: 229 LQMAVLVEKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKN 273
+ ++ +Q L+ I+ NV+++ T Q+ KA QY++KN
Sbjct: 251 RDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKN 295
>gi|34447229 syntaxin 16 isoform b [Homo sapiens]
Length = 304
Score = 48.1 bits (113), Expect = 9e-06
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 25/225 (11%)
Query: 61 DVKRLGKQNARFLTSMR-------RLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEA 113
DV R+ KQ + L S+ L + ++I + ++ H RA++ L
Sbjct: 67 DVGRI-KQKMKELASLHDKHLNRPTLDDSSEEEHAIEITTQEITQLFHRCQRAVQALPSR 125
Query: 114 AEA---QHGP--HSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIM 168
A A Q G + VA +++A L+ +F+ A Y +K+ N + R Q +
Sbjct: 126 ARACSEQEGRLLGNVVASLAQA-LQELSTSFRHAQSGY----LKRMKNREERSQHFFDTS 180
Query: 169 GKEVSGDQIEDMFEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELF 228
+ ++ +G F+E+ L V+ +E R RE+ ++ I D++E+F
Sbjct: 181 VPLMDDGDDNTLYHRG----FTEDQLVLVEQNTLM---VEEREREIRQIVQSISDLNEIF 233
Query: 229 LQMAVLVEKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKN 273
+ ++ +Q L+ I+ NV+++ T Q+ KA QY++KN
Sbjct: 234 RDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKN 278
>gi|223972648 t-SNARE domain containing 1 [Homo sapiens]
Length = 513
Score = 38.5 bits (88), Expect = 0.007
Identities = 45/242 (18%), Positives = 103/242 (42%), Gaps = 15/242 (6%)
Query: 50 DIQDENQLLVADVKRLGKQNA---RFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRA 106
++Q+ Q + A+V R+ R L S+ S + +S+ A + + I +
Sbjct: 256 NLQELFQEMSANVFRINSSVTSLERSLQSLGTPSDTQELRDSLHTAQQETNKTIAASASS 315
Query: 107 MKELSEAAEAQHGPHSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRI----- 161
+K+++E + P + + R Q + L A+ Y + K + + +
Sbjct: 316 VKQMAELLRSSC-PQERLQQ-ERPQLDRLKTQLSDAIQCYGVVQKKIAEKSRALLPMAQR 373
Query: 162 --QRQLEIMGKEVSGDQIEDMFEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLES 219
++ + E++ D+ W + LL D+ L I R +L++ES
Sbjct: 374 GSKQSPQAPFAELADDEKVFNGSDNMWQGQEQALLPDI--TEEDLEAIRLREEAILQMES 431
Query: 220 RIRDVHELFLQMAVLVEKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLC 279
+ DV+++ +A +V +Q + ++ IE +++ + A+ + A +++ + + C
Sbjct: 432 NLLDVNQIIKDLASMVSEQGEAVDSIEASLEAASSHAEAARQLLAGASRHQLQRH-KIKC 490
Query: 280 CF 281
CF
Sbjct: 491 CF 492
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 38.5 bits (88), Expect = 0.007
Identities = 49/234 (20%), Positives = 108/234 (46%), Gaps = 18/234 (7%)
Query: 25 EFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVADVKRLGKQNARFLTSMRRLSSIKR 84
E S H+++V ET LE+ ++++ + D+ + A+++ L K N S++ L +
Sbjct: 890 EDTSAHQNVVAETLSALENKEKELQLLNDKVETEQAEIQELKKSNHLLEDSLKELQLLS- 948
Query: 85 DTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGPHSAV-ARISRAQYNALTLTFQRAM 143
+T S+ K K +I R ++EL++ ++G + A +++ + N + Q++
Sbjct: 949 ETLSLEK--KEMSSIISLNKREIEELTQ----ENGTLKEINASLNQEKMNLI----QKSE 998
Query: 144 HDYNQAEMKQRDNCKIRIQRQLE----IMGKEVSGDQIEDMFEQGKWDVFSENLLADVKG 199
N + +++ ++ Q + E + E +G+ ED+ ++ K + L +
Sbjct: 999 SFANYIDEREKSISELSDQYKQEKLILLQRCEETGNAYEDLSQKYKAAQEKNSKLECLLN 1058
Query: 200 ARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQADTLNVIELNVQKTV 253
+L E+R EL +L+ H+ FL E++ L + VQ+ +
Sbjct: 1059 ECTSL--CENRKNELEQLKEAFAKEHQEFLTKLAFAEERNQNLMLELETVQQAL 1110
>gi|4505489 ornithine decarboxylase 1 [Homo sapiens]
Length = 461
Score = 37.0 bits (84), Expect = 0.020
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 22 GDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVADVKRLGKQNARFLTSMRRLS- 80
G++EFD D F IL+ ++ D++ VAD+ + K++ R+L ++ R++
Sbjct: 5 GNEEFDCHFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKALPRVTP 64
Query: 81 --SIK-RDTNSIAKAIKARGEVIHCKLRAMKELSEA 113
++K D+ +I K + A G C + +L ++
Sbjct: 65 FYAVKCNDSKAIVKTLAATGTGFDCASKTEIQLVQS 100
>gi|13540600 nudE nuclear distribution gene E homolog (A.
nidulans)-like 1 isoform B [Homo sapiens]
Length = 345
Score = 36.6 bits (83), Expect = 0.026
Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 1 MKDRLAELLDLSKQYDQQFPDGDDE---FDSPHEDIVFETDHILESLYRDIRDIQDENQL 57
+K+ A +LS +Y Q F + DE F ++ E + L + RD+Q +NQ
Sbjct: 12 LKEETAYWKELSLKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRNRDLQADNQR 71
Query: 58 LVADVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQ 117
L +V+ L ++ + S+ D S +AIK E +H +R +++ ++ E
Sbjct: 72 LKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIK---EQLHKYVRELEQANDDLE-- 126
Query: 118 HGPHSAVARISRAQYNALTLTFQR-----AMHDYNQAEMKQRDNCKIRIQR 163
R RA +L QR + + ++E+ ++++ + +QR
Sbjct: 127 --------RAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQR 169
>gi|71284108 nudE nuclear distribution gene E homolog (A.
nidulans)-like 1 isoform A [Homo sapiens]
Length = 328
Score = 36.6 bits (83), Expect = 0.026
Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 1 MKDRLAELLDLSKQYDQQFPDGDDE---FDSPHEDIVFETDHILESLYRDIRDIQDENQL 57
+K+ A +LS +Y Q F + DE F ++ E + L + RD+Q +NQ
Sbjct: 12 LKEETAYWKELSLKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRNRDLQADNQR 71
Query: 58 LVADVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQ 117
L +V+ L ++ + S+ D S +AIK E +H +R +++ ++ E
Sbjct: 72 LKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIK---EQLHKYVRELEQANDDLE-- 126
Query: 118 HGPHSAVARISRAQYNALTLTFQR-----AMHDYNQAEMKQRDNCKIRIQR 163
R RA +L QR + + ++E+ ++++ + +QR
Sbjct: 127 --------RAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQR 169
>gi|118498362 kinectin 1 isoform b [Homo sapiens]
Length = 1306
Score = 36.2 bits (82), Expect = 0.034
Identities = 41/221 (18%), Positives = 86/221 (38%), Gaps = 14/221 (6%)
Query: 31 EDIVFETDHILESLYRDIRDIQDENQLLVADVKRLGKQNARFLTSMRRLSSIKRDTNSIA 90
E ++ E + L S + ++D+QDEN+L + +++L +QN + +S +
Sbjct: 923 EAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSF-------PPHEELL 975
Query: 91 KAIKARGEVIHCKLRAMKELSEAAEAQHGPHSAVARISRAQYNALTLTFQRAMHDYNQAE 150
K I R + I + L +A E Q ++ + + AL T + N+
Sbjct: 976 KVISEREKEISGLWNELDSLKDAVEHQRKKNNDLREKNWEAMEALASTEKMLQDKVNKTS 1035
Query: 151 MKQRDNCKIRIQRQLEIMGKEVSGDQIEDMFEQGKWDVFSENLLADVKGARAALNEIESR 210
+++ + E++ K + G+W E + + E++
Sbjct: 1036 KERQQQVEAVELEAKEVLKKLFPKVSVPSNLSYGEWLHGFEKKAKECMAGTSGSEEVKV- 1094
Query: 211 HRELLRLESRIRDVHELFLQMAVLVEKQADTLNVIELNVQK 251
LE ++++ E+ + + EK L E +QK
Sbjct: 1095 ------LEHKLKEADEMHTLLQLECEKYKSVLAETEGILQK 1129
Score = 31.2 bits (69), Expect = 1.1
Identities = 54/255 (21%), Positives = 117/255 (45%), Gaps = 31/255 (12%)
Query: 27 DSPHEDIVFETDHILESLYRDIRDIQD--ENQLLVADVKR-----LGKQNARFLTSMRRL 79
+ P++D+V + + ++ ++ +++ E L+ K + +N+ ++ L
Sbjct: 723 EQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDL 782
Query: 80 SSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGPHSAVARISRAQYNALTLTF 139
+ + D S A ++ +VIH K +K + E EA+ + ++ + L++T
Sbjct: 783 KAKQNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAE-----LLKVANKEKTVQLSIT- 836
Query: 140 QRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDMFEQGKW--DVFSEN--LLA 195
+++++ N + Q+ M K V ++ +D+ GKW D+ EN L A
Sbjct: 837 ---------SKVQELQNLLKGKEEQMNTM-KAVLEEKEKDLANTGKWLQDLQEENESLKA 886
Query: 196 DVKG-ARAALNEIESRHR-ELLRLESRIRDVHELFLQMAVLVEKQADTLNVIELNVQKTV 253
V+ A+ L E S + E L + + ++ +EL A+L E+++D + +L +Q
Sbjct: 887 HVQEVAQHNLKEASSASQFEELEIVLKEKE-NELKRLEAMLKERESDLSSKTQL-LQDVQ 944
Query: 254 DYTGQAKAQVRKAVQ 268
D K+Q+ + Q
Sbjct: 945 DENKLFKSQIEQLKQ 959
Score = 28.5 bits (62), Expect = 7.1
Identities = 36/187 (19%), Positives = 82/187 (43%), Gaps = 19/187 (10%)
Query: 2 KDRLAELLDLSKQYD-QQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVA 60
K++ +L SK + Q G +E + + ++ E + L + + ++D+Q+EN+ L A
Sbjct: 827 KEKTVQLSITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKA 886
Query: 61 DVKRLGKQNARFLTS---MRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQ 117
V+ + + N + +S L + ++ + K ++A + L + +L + + +
Sbjct: 887 HVQEVAQHNLKEASSASQFEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDE 946
Query: 118 HGPHSAVARISRAQYNALTLTFQRAMHDYNQAEM--KQRDNCKIRIQRQLEIMGKEVSGD 175
+ ++ ++Q Q +Y QA + K+ +R+ EI G D
Sbjct: 947 N-------KLFKSQIE------QLKQQNYQQASSFPPHEELLKVISEREKEISGLWNELD 993
Query: 176 QIEDMFE 182
++D E
Sbjct: 994 SLKDAVE 1000
>gi|118498356 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 36.2 bits (82), Expect = 0.034
Identities = 41/221 (18%), Positives = 86/221 (38%), Gaps = 14/221 (6%)
Query: 31 EDIVFETDHILESLYRDIRDIQDENQLLVADVKRLGKQNARFLTSMRRLSSIKRDTNSIA 90
E ++ E + L S + ++D+QDEN+L + +++L +QN + +S +
Sbjct: 946 EAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSF-------PPHEELL 998
Query: 91 KAIKARGEVIHCKLRAMKELSEAAEAQHGPHSAVARISRAQYNALTLTFQRAMHDYNQAE 150
K I R + I + L +A E Q ++ + + AL T + N+
Sbjct: 999 KVISEREKEISGLWNELDSLKDAVEHQRKKNNDLREKNWEAMEALASTEKMLQDKVNKTS 1058
Query: 151 MKQRDNCKIRIQRQLEIMGKEVSGDQIEDMFEQGKWDVFSENLLADVKGARAALNEIESR 210
+++ + E++ K + G+W E + + E++
Sbjct: 1059 KERQQQVEAVELEAKEVLKKLFPKVSVPSNLSYGEWLHGFEKKAKECMAGTSGSEEVKV- 1117
Query: 211 HRELLRLESRIRDVHELFLQMAVLVEKQADTLNVIELNVQK 251
LE ++++ E+ + + EK L E +QK
Sbjct: 1118 ------LEHKLKEADEMHTLLQLECEKYKSVLAETEGILQK 1152
Score = 31.2 bits (69), Expect = 1.1
Identities = 55/263 (20%), Positives = 118/263 (44%), Gaps = 24/263 (9%)
Query: 27 DSPHEDIVFETDHILESLYRDIRDIQD--ENQLLVADVKR-----LGKQNARFLTSMRRL 79
+ P++D+V + + ++ ++ +++ E L+ K + +N+ ++ L
Sbjct: 723 EQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDL 782
Query: 80 SSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQ---HGPHSAVARISRAQYNAL- 135
+ + D S A ++ +VIH K +K + E EA+ + + + AL
Sbjct: 783 KAKQNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALK 842
Query: 136 ----TLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDMFEQGKW--DVF 189
+ ++A +++++ N + Q+ M K V ++ +D+ GKW D+
Sbjct: 843 EEIGNVQLEKAQQLSITSKVQELQNLLKGKEEQMNTM-KAVLEEKEKDLANTGKWLQDLQ 901
Query: 190 SEN--LLADVKG-ARAALNEIESRHR-ELLRLESRIRDVHELFLQMAVLVEKQADTLNVI 245
EN L A V+ A+ L E S + E L + + ++ +EL A+L E+++D +
Sbjct: 902 EENESLKAHVQEVAQHNLKEASSASQFEELEIVLKEKE-NELKRLEAMLKERESDLSSKT 960
Query: 246 ELNVQKTVDYTGQAKAQVRKAVQ 268
+L +Q D K+Q+ + Q
Sbjct: 961 QL-LQDVQDENKLFKSQIEQLKQ 982
>gi|33620775 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 36.2 bits (82), Expect = 0.034
Identities = 41/221 (18%), Positives = 86/221 (38%), Gaps = 14/221 (6%)
Query: 31 EDIVFETDHILESLYRDIRDIQDENQLLVADVKRLGKQNARFLTSMRRLSSIKRDTNSIA 90
E ++ E + L S + ++D+QDEN+L + +++L +QN + +S +
Sbjct: 946 EAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSF-------PPHEELL 998
Query: 91 KAIKARGEVIHCKLRAMKELSEAAEAQHGPHSAVARISRAQYNALTLTFQRAMHDYNQAE 150
K I R + I + L +A E Q ++ + + AL T + N+
Sbjct: 999 KVISEREKEISGLWNELDSLKDAVEHQRKKNNDLREKNWEAMEALASTEKMLQDKVNKTS 1058
Query: 151 MKQRDNCKIRIQRQLEIMGKEVSGDQIEDMFEQGKWDVFSENLLADVKGARAALNEIESR 210
+++ + E++ K + G+W E + + E++
Sbjct: 1059 KERQQQVEAVELEAKEVLKKLFPKVSVPSNLSYGEWLHGFEKKAKECMAGTSGSEEVKV- 1117
Query: 211 HRELLRLESRIRDVHELFLQMAVLVEKQADTLNVIELNVQK 251
LE ++++ E+ + + EK L E +QK
Sbjct: 1118 ------LEHKLKEADEMHTLLQLECEKYKSVLAETEGILQK 1152
Score = 31.2 bits (69), Expect = 1.1
Identities = 55/263 (20%), Positives = 118/263 (44%), Gaps = 24/263 (9%)
Query: 27 DSPHEDIVFETDHILESLYRDIRDIQD--ENQLLVADVKR-----LGKQNARFLTSMRRL 79
+ P++D+V + + ++ ++ +++ E L+ K + +N+ ++ L
Sbjct: 723 EQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDL 782
Query: 80 SSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQ---HGPHSAVARISRAQYNAL- 135
+ + D S A ++ +VIH K +K + E EA+ + + + AL
Sbjct: 783 KAKQNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALK 842
Query: 136 ----TLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDMFEQGKW--DVF 189
+ ++A +++++ N + Q+ M K V ++ +D+ GKW D+
Sbjct: 843 EEIGNVQLEKAQQLSITSKVQELQNLLKGKEEQMNTM-KAVLEEKEKDLANTGKWLQDLQ 901
Query: 190 SEN--LLADVKG-ARAALNEIESRHR-ELLRLESRIRDVHELFLQMAVLVEKQADTLNVI 245
EN L A V+ A+ L E S + E L + + ++ +EL A+L E+++D +
Sbjct: 902 EENESLKAHVQEVAQHNLKEASSASQFEELEIVLKEKE-NELKRLEAMLKERESDLSSKT 960
Query: 246 ELNVQKTVDYTGQAKAQVRKAVQ 268
+L +Q D K+Q+ + Q
Sbjct: 961 QL-LQDVQDENKLFKSQIEQLKQ 982
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 34.7 bits (78), Expect = 0.099
Identities = 52/277 (18%), Positives = 125/277 (45%), Gaps = 26/277 (9%)
Query: 15 YDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVADVKRL----GKQNA 70
+++Q + D D ++++ ++ L+ L + + IQ+E +LL + + G
Sbjct: 1934 FERQIQEKTDIIDRLEQELLCASNR-LQELEAEQQQIQEERELLSRQKEAMKAEAGPVEQ 1992
Query: 71 RFLTSMRRLSSIKRDTNSIAKAIK--ARGEVIHCKLRAMKELSEAAEAQHGPHSAVARIS 128
+ L +L K + A+ ++ + +V ++ +++S E + ++ + +
Sbjct: 1993 QLLQETEKLMKEKLEVQCQAEKVRDDLQKQVKALEIDVEEQVSRFIELEQEKNTELMDL- 2051
Query: 129 RAQYNALTLTFQR--------AMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDM 180
R Q AL ++ A+ ++ ++ Q++ K+ Q ++ + +S Q ++
Sbjct: 2052 RQQNQALEKQLEKMRKFLDEQAIDREHERDVFQQEIQKLEQQLKVVPRFQPISEHQTREV 2111
Query: 181 FE-----QGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLV 235
+ + K D SE LL+ + R +I+ R+ E+ +LE R+R++ + L A
Sbjct: 2112 EQLANHLKEKTDKCSELLLSKEQLQR----DIQERNEEIEKLEFRVRELEQALLVSADTF 2167
Query: 236 EKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQYEEK 272
+K D + + + + Q +A+ R A+ +EK
Sbjct: 2168 QKVEDRKHFGAVEAKPELSLEVQLQAE-RDAIDRKEK 2203
>gi|61966741 TMF regulated nuclear protein [Homo sapiens]
Length = 227
Score = 34.7 bits (78), Expect = 0.099
Identities = 19/66 (28%), Positives = 36/66 (54%)
Query: 200 ARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQADTLNVIELNVQKTVDYTGQA 259
AR L E+E R R + LESR+ +H +FL + + +A++L+ + V + Y
Sbjct: 106 ARRRLLEVEGRRRLVSELESRVLQLHRVFLAAELRLAHRAESLSRLSGGVAQAELYLAAH 165
Query: 260 KAQVRK 265
++++K
Sbjct: 166 GSRLKK 171
>gi|95089461 discs large homolog 5 [Homo sapiens]
Length = 1919
Score = 34.3 bits (77), Expect = 0.13
Identities = 46/259 (17%), Positives = 113/259 (43%), Gaps = 29/259 (11%)
Query: 39 HILESLYRDIRDIQDENQLLVADVKRLGKQ-----------NARFLTSMRRLSSIKRDTN 87
++L+ + D++ + +E+Q + D++ +Q N + T+M +L +K+D +
Sbjct: 259 NLLQQSWEDMKRLHEEDQKEIGDLRAQQQQVLKHNGSSEILNKLYDTAMDKLEVVKKDYD 318
Query: 88 SIAKAIKARGEVIHCKLRAMKELSE-----AAEAQHGPHSAVARISRAQYNALTL-TFQR 141
++ K + + + L +++L E + + I AL+L F+
Sbjct: 319 ALRKRYSEKVAIHNADLSRLEQLGEENQRLLKQTEMLTQQRDTAIQLQHQCALSLRRFEA 378
Query: 142 AMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDMFEQGKWDVFSENLLADVKGAR 201
H+ N+A + +D +Q ++E++ E++ + + + + + E A +
Sbjct: 379 IHHELNKATAQNKD-----LQWEMELLQSELTELRTTQVKTAKESEKYREERDAVYSEYK 433
Query: 202 AALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQADTLNVIELNVQKTVDY-TGQAK 260
++E + EL +L++ + ++ E L+ + +K A+ ++ TV G+A
Sbjct: 434 LIMSERDQVISELDKLQTEV-ELAESKLKSSTSEKKAANEEMEALRQIKDTVTMDAGRAN 492
Query: 261 AQVRKAVQYEEKNPCRTLC 279
+V + C+ LC
Sbjct: 493 KEVEIL-----RKQCKALC 506
>gi|109659847 filamin A interacting protein 1-like isoform 3 [Homo
sapiens]
Length = 1133
Score = 33.9 bits (76), Expect = 0.17
Identities = 44/249 (17%), Positives = 112/249 (44%), Gaps = 37/249 (14%)
Query: 2 KDRLAELLDLS--KQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLV 59
K R +L+L K+ +++ + DEF E E + + + + ++I+ +++ Q
Sbjct: 166 KSRRQTILELEEEKRKHKEYMEKSDEFICLLEQ---ECERLKKLIDQEIKSQEEKEQ--- 219
Query: 60 ADVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHG 119
++ R T L+ +K + + + + + ++EL+ A+ H
Sbjct: 220 -------EKEKRVTTLKEELTKLKSFALMVVDEQQRLTAQLTLQRQKIQELTTNAKETHT 272
Query: 120 PHS-AVARISRAQYNALTL-----TFQRAMH---DYNQAEMKQRDNCKIRIQRQLEIMGK 170
+ A AR+ + A L T H D A++ D+ ++Q++L + +
Sbjct: 273 KLALAEARVQEEEQKATRLEKELQTQTTKFHQDQDTIMAKLTNEDSQNRQLQQKLAALSR 332
Query: 171 EV------------SGDQIEDMFEQ-GKWDVFSENLLADVKGARAALNEIESRHRELLRL 217
++ + ++++D+ E+ K + + ++A+V+ R + ++E + EL+++
Sbjct: 333 QIDELEETNRSLRKAEEELQDIKEKISKGEYGNAGIMAEVEELRKRVLDMEGKDEELIKM 392
Query: 218 ESRIRDVHE 226
E + RD+++
Sbjct: 393 EEQCRDLNK 401
>gi|109659845 filamin A interacting protein 1-like isoform 1 [Homo
sapiens]
Length = 1135
Score = 33.9 bits (76), Expect = 0.17
Identities = 44/249 (17%), Positives = 112/249 (44%), Gaps = 37/249 (14%)
Query: 2 KDRLAELLDLS--KQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLV 59
K R +L+L K+ +++ + DEF E E + + + + ++I+ +++ Q
Sbjct: 166 KSRRQTILELEEEKRKHKEYMEKSDEFICLLEQ---ECERLKKLIDQEIKSQEEKEQ--- 219
Query: 60 ADVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHG 119
++ R T L+ +K + + + + + ++EL+ A+ H
Sbjct: 220 -------EKEKRVTTLKEELTKLKSFALMVVDEQQRLTAQLTLQRQKIQELTTNAKETHT 272
Query: 120 PHS-AVARISRAQYNALTL-----TFQRAMH---DYNQAEMKQRDNCKIRIQRQLEIMGK 170
+ A AR+ + A L T H D A++ D+ ++Q++L + +
Sbjct: 273 KLALAEARVQEEEQKATRLEKELQTQTTKFHQDQDTIMAKLTNEDSQNRQLQQKLAALSR 332
Query: 171 EV------------SGDQIEDMFEQ-GKWDVFSENLLADVKGARAALNEIESRHRELLRL 217
++ + ++++D+ E+ K + + ++A+V+ R + ++E + EL+++
Sbjct: 333 QIDELEETNRSLRKAEEELQDIKEKISKGEYGNAGIMAEVEELRKRVLDMEGKDEELIKM 392
Query: 218 ESRIRDVHE 226
E + RD+++
Sbjct: 393 EEQCRDLNK 401
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 33.9 bits (76), Expect = 0.17
Identities = 61/272 (22%), Positives = 120/272 (44%), Gaps = 79/272 (29%)
Query: 5 LAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVADVKR 64
+ L ++ K Y+QQ D H+++V + H ++++ + +D N++ A+ K
Sbjct: 1541 IESLNEVLKNYNQQK-------DIEHKELVQKLQH-----FQELGEEKD-NRVKEAEEKI 1587
Query: 65 LGKQNARFLTSMR-RLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGPHSA 123
L +N + SM+ L + K++ + ++K++ E +L+A+++ E+ A
Sbjct: 1588 LTLENQVY--SMKAELETKKKELEHVNLSVKSKEE----ELKALEDRLESESAA------ 1635
Query: 124 VARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIR-IQRQLEIMGKEVSGDQIEDMFE 182
AE+K++ KI I++QL Q+E+ E
Sbjct: 1636 -----------------------KLAELKRKAEQKIAAIKKQLL--------SQMEEKEE 1664
Query: 183 QGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVEKQADTL 242
Q K KG + L+E+ ++ L+ R R+VH L ++ + Q++TL
Sbjct: 1665 QYK------------KGTESHLSELNTK------LQEREREVHILEEKLKSVESSQSETL 1706
Query: 243 NVIELNVQKTVDYTGQAKAQVRKAVQ--YEEK 272
++ + + YT Q +A + VQ YEEK
Sbjct: 1707 -IVPRSAKNVAAYTEQEEADSQGCVQKTYEEK 1737
Score = 29.3 bits (64), Expect = 4.2
Identities = 49/243 (20%), Positives = 96/243 (39%), Gaps = 21/243 (8%)
Query: 2 KDRLAELLDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDENQLLVAD 61
K +++EL K D++F S HE +++ LE + + + +E L
Sbjct: 1168 KRKVSELTSKLKTTDEEF----QSLKSSHE----KSNKSLEDKSLEFKKLSEE---LAIQ 1216
Query: 62 VKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRA--MKELSEAAEAQHG 119
+ K+ L + + + + ++S AI +R + HC+ R +KE
Sbjct: 1217 LDICCKKTEALLEA--KTNELINISSSKTNAILSR--ISHCQHRTTKVKEALLIKTCTVS 1272
Query: 120 PHSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQ---RQLEIMGKEVSGDQ 176
A R + N L ++FQ+A H + E Q + K I+ + E + KE Q
Sbjct: 1273 ELEAQLRQLTEEQNTLNISFQQATHQLEEKE-NQIKSMKADIESLVTEKEALQKEGGNQQ 1331
Query: 177 IEDMFEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVLVE 236
++ + L ++ E++ + E+ L ++ D++ L E
Sbjct: 1332 QAASEKESCITQLKKELSENINAVTLMKEELKEKKVEISSLSKQLTDLNVQLQNSISLSE 1391
Query: 237 KQA 239
K+A
Sbjct: 1392 KEA 1394
Score = 28.5 bits (62), Expect = 7.1
Identities = 49/236 (20%), Positives = 96/236 (40%), Gaps = 15/236 (6%)
Query: 51 IQDENQLLVADVKRLGKQNARFL-TSMRRLSSIKRDTNSIAKA---IKARGEVIHCKLRA 106
++D+ + A ++ + ++ L L S+ + + + KA ++ V+ +
Sbjct: 657 LKDKEIIFQAHIEEMNEKTLEKLDVKQTELESLSSELSEVLKARHKLEEELSVLKDQTDK 716
Query: 107 MKELSEAAEAQHGPH--SAVARISRAQYNALTLTFQRAMHDYNQAEM--KQRDNCKIRIQ 162
MK+ EA + H V I + ++ T + NQ E+ K+RD Q
Sbjct: 717 MKQELEAKMDEQKNHHQQQVDSIIKEHEVSIQRTEKALKDQINQLELLLKERDKHLKEHQ 776
Query: 163 RQLEIMGKEVSGDQIEDMFEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESR-- 220
+E + ++ + E K DVF A + +A ++ ++LL LE+
Sbjct: 777 AHVENLEADIKRSEGELQQASAKLDVFQSYQSATHEQTKAYEEQLAQLQQKLLDLETERI 836
Query: 221 --IRDVHELFLQMA-VLVEKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQ-YEEK 272
+ V E+ Q V E A + V +L +Q+ + + +V+ Q YE K
Sbjct: 837 LLTKQVAEVEAQKKDVCTELDAHKIQVQDL-MQQLEKQNSEMEQKVKSLTQVYESK 891
>gi|75750474 spectrin domain with coiled-coils 1 NSP5a3b [Homo
sapiens]
Length = 987
Score = 33.1 bits (74), Expect = 0.29
Identities = 50/282 (17%), Positives = 115/282 (40%), Gaps = 54/282 (19%)
Query: 39 HILESLYRDIRDIQDENQLLVADVKRLGKQNAR---FLTSMRR---------------LS 80
+I + L +R +++ENQ + +KRL ++N + FL R L
Sbjct: 405 NIQQQLTCSLRKVEEENQGALEMIKRLKEENEKLNEFLELERHNNNMMAKTLEECRVTLE 464
Query: 81 SIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGPHSAVARISRAQYNALTLTFQ 140
+K + S+ ++ + + A+++ +E+ E Q + +++RA+ + L L+
Sbjct: 465 GLKMENGSLKSHLQGEKQKA-TEASAVEQTAESCEVQE-----MLKVARAEKDLLELSCN 518
Query: 141 RAMHDYNQA--EMKQRDNCKIRIQRQLEIMGKEVSGDQIEDMFEQG-KWDVFSENLLADV 197
+ +A E+K + ++++ + KE+ Q E + K + A++
Sbjct: 519 ELRQELLKANGEIKHVSSLLAKVEKDYSYL-KEICDHQAEQLSRTSLKLQEKASESDAEI 577
Query: 198 KGARAALNEIE---SRHR---------------ELLRLESRIRDVHELFLQMAVLVEKQA 239
K + + E+E +HR +++LE + D+ + ++++
Sbjct: 578 KDMKETIFELEDQVEQHRAVKLHNNQLISELESSVIKLEEQKSDLERQLKTLTKQMKEET 637
Query: 240 DTLNVIELNVQKTVDYTGQAKAQV--------RKAVQYEEKN 273
+ + ++Q V K + RK ++ EEKN
Sbjct: 638 EEWRRFQADLQTAVVVANDIKCEAQQELRTVKRKLLEEEEKN 679
>gi|75750468 spectrin domain with coiled-coils 1 NSP5a3a [Homo
sapiens]
Length = 709
Score = 33.1 bits (74), Expect = 0.29
Identities = 50/282 (17%), Positives = 115/282 (40%), Gaps = 54/282 (19%)
Query: 39 HILESLYRDIRDIQDENQLLVADVKRLGKQNAR---FLTSMRR---------------LS 80
+I + L +R +++ENQ + +KRL ++N + FL R L
Sbjct: 405 NIQQQLTCSLRKVEEENQGALEMIKRLKEENEKLNEFLELERHNNNMMAKTLEECRVTLE 464
Query: 81 SIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAAEAQHGPHSAVARISRAQYNALTLTFQ 140
+K + S+ ++ + + A+++ +E+ E Q + +++RA+ + L L+
Sbjct: 465 GLKMENGSLKSHLQGEKQKA-TEASAVEQTAESCEVQE-----MLKVARAEKDLLELSCN 518
Query: 141 RAMHDYNQA--EMKQRDNCKIRIQRQLEIMGKEVSGDQIEDMFEQG-KWDVFSENLLADV 197
+ +A E+K + ++++ + KE+ Q E + K + A++
Sbjct: 519 ELRQELLKANGEIKHVSSLLAKVEKDYSYL-KEICDHQAEQLSRTSLKLQEKASESDAEI 577
Query: 198 KGARAALNEIE---SRHR---------------ELLRLESRIRDVHELFLQMAVLVEKQA 239
K + + E+E +HR +++LE + D+ + ++++
Sbjct: 578 KDMKETIFELEDQVEQHRAVKLHNNQLISELESSVIKLEEQKSDLERQLKTLTKQMKEET 637
Query: 240 DTLNVIELNVQKTVDYTGQAKAQV--------RKAVQYEEKN 273
+ + ++Q V K + RK ++ EEKN
Sbjct: 638 EEWRRFQADLQTAVVVANDIKCEAQQELRTVKRKLLEEEEKN 679
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.133 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,896,754
Number of Sequences: 37866
Number of extensions: 319359
Number of successful extensions: 1561
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 1485
Number of HSP's gapped (non-prelim): 155
length of query: 287
length of database: 18,247,518
effective HSP length: 101
effective length of query: 186
effective length of database: 14,423,052
effective search space: 2682687672
effective search space used: 2682687672
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.