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Search of human proteins with 33469937
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33469937 EGF-like, fibronectin type III and laminin G
domains isoform 4 [Homo sapiens]
(152 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33469937 EGF-like, fibronectin type III and laminin G domains... 313 5e-86
gi|33469935 EGF-like, fibronectin type III and laminin G domains... 313 5e-86
gi|33469931 EGF-like, fibronectin type III and laminin G domains... 313 5e-86
gi|33469929 EGF-like, fibronectin type III and laminin G domains... 313 5e-86
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens] 110 6e-25
gi|54873613 agrin [Homo sapiens] 83 8e-17
gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo s... 69 1e-12
gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sa... 69 1e-12
gi|224451128 eyes shut homolog isoform 1 [Homo sapiens] 62 1e-10
gi|14149613 neurexin 1 isoform alpha1 precursor [Homo sapiens] 62 2e-10
gi|157419126 laminin, alpha 4 isoform 2 precursor [Homo sapiens] 60 5e-10
gi|157419124 laminin, alpha 4 isoform 1 precursor [Homo sapiens] 60 5e-10
gi|157419122 laminin, alpha 4 isoform 2 precursor [Homo sapiens] 60 5e-10
gi|208609951 neurexin 1 isoform alpha2 precursor [Homo sapiens] 59 1e-09
gi|21166380 neurexin 2 isoform alpha-2 precursor [Homo sapiens] 59 2e-09
gi|38788416 laminin, alpha 1 precursor [Homo sapiens] 58 3e-09
gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens] 57 5e-09
gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens] 57 5e-09
gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens] 57 5e-09
gi|38045908 laminin alpha 3 subunit isoform 2 [Homo sapiens] 57 5e-09
gi|21070969 neurexin 3 isoform 1 precursor [Homo sapiens] 57 8e-09
gi|14211536 neurexin 2 isoform alpha-1 precursor [Homo sapiens] 56 1e-08
gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo sap... 56 1e-08
gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo sap... 56 1e-08
gi|4505463 contactin associated protein 1 precursor [Homo sapiens] 56 1e-08
gi|165932370 FAT tumor suppressor homolog 4 [Homo sapiens] 55 2e-08
gi|239743797 PREDICTED: similar to cell recognition molecule CAS... 53 1e-07
gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1... 53 1e-07
gi|47519929 cell recognition molecule CASPR3 [Homo sapiens] 53 1e-07
gi|66346693 FAT tumor suppressor 1 precursor [Homo sapiens] 52 2e-07
>gi|33469937 EGF-like, fibronectin type III and laminin G domains
isoform 4 [Homo sapiens]
Length = 152
Score = 313 bits (801), Expect = 5e-86
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW
Sbjct: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLV 120
HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLV
Sbjct: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLV 120
Query: 121 GCISHFTLSTDYHISLVEDAVDGKNINTCGAK 152
GCISHFTLSTDYHISLVEDAVDGKNINTCGAK
Sbjct: 121 GCISHFTLSTDYHISLVEDAVDGKNINTCGAK 152
>gi|33469935 EGF-like, fibronectin type III and laminin G domains
isoform 3 [Homo sapiens]
Length = 375
Score = 313 bits (801), Expect = 5e-86
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW
Sbjct: 224 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 283
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLV 120
HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLV
Sbjct: 284 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLV 343
Query: 121 GCISHFTLSTDYHISLVEDAVDGKNINTCGAK 152
GCISHFTLSTDYHISLVEDAVDGKNINTCGAK
Sbjct: 344 GCISHFTLSTDYHISLVEDAVDGKNINTCGAK 375
Score = 56.6 bits (135), Expect = 8e-09
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Query: 3 FKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHR 62
F+ + DG+LL+ D+ + DF+S+ L G + F ++ GSG + G WH
Sbjct: 7 FRPDSGDGVLLYSYDTGSK---DFLSINLAGGHVEFRFDCGSGTGVLRSEDPLTLGNWHE 63
Query: 63 VKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEI-ALHTNRQYMRGLVG 121
++ R ++G + VD G + G Q+ N +++GG+ + N ++ G
Sbjct: 64 LRVSRTAKNGILQVDKQKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGVLKPFSG 123
Query: 122 CISHFTLSTDYHISLVEDAVDGKNI 146
I L+ D I + D G N+
Sbjct: 124 SIQKIILN-DRTIHVKHDFTSGVNV 147
>gi|33469931 EGF-like, fibronectin type III and laminin G domains
isoform 2 [Homo sapiens]
Length = 775
Score = 313 bits (801), Expect = 5e-86
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW
Sbjct: 624 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 683
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLV 120
HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLV
Sbjct: 684 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLV 743
Query: 121 GCISHFTLSTDYHISLVEDAVDGKNINTCGAK 152
GCISHFTLSTDYHISLVEDAVDGKNINTCGAK
Sbjct: 744 GCISHFTLSTDYHISLVEDAVDGKNINTCGAK 775
Score = 69.3 bits (168), Expect = 1e-12
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
+ F+ A+DGLLL+ G++ DF+SL + +L F +N G+GVA I+ G W
Sbjct: 179 LEFRAEAEDGLLLYCGENE-HGRGDFMSLAIIRRSLQFRFNCGTGVAIIVSETKIKLGGW 237
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEI-----ALHTNRQY 115
H V RDG +G + +++ TG+S G ++ LY+GG A TN
Sbjct: 238 HTVMLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGGAPSAYWLVRATGTN--- 294
Query: 116 MRGLVGCISHFTLS---TDYHISLVEDAVDGKNINTCGA 151
RG GC+ ++ D + A+ G ++ C +
Sbjct: 295 -RGFQGCVQSLAVNGRRIDMRPWPLGKALSGADVGECSS 332
Score = 56.6 bits (135), Expect = 8e-09
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Query: 3 FKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHR 62
F+ + DG+LL+ D+ + DF+S+ L G + F ++ GSG + G WH
Sbjct: 407 FRPDSGDGVLLYSYDTGSK---DFLSINLAGGHVEFRFDCGSGTGVLRSEDPLTLGNWHE 463
Query: 63 VKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEI-ALHTNRQYMRGLVG 121
++ R ++G + VD G + G Q+ N +++GG+ + N ++ G
Sbjct: 464 LRVSRTAKNGILQVDKQKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGVLKPFSG 523
Query: 122 CISHFTLSTDYHISLVEDAVDGKNI 146
I L+ D I + D G N+
Sbjct: 524 SIQKIILN-DRTIHVKHDFTSGVNV 547
>gi|33469929 EGF-like, fibronectin type III and laminin G domains
isoform 1 [Homo sapiens]
Length = 1009
Score = 313 bits (801), Expect = 5e-86
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW
Sbjct: 858 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 917
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLV 120
HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLV
Sbjct: 918 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLV 977
Query: 121 GCISHFTLSTDYHISLVEDAVDGKNINTCGAK 152
GCISHFTLSTDYHISLVEDAVDGKNINTCGAK
Sbjct: 978 GCISHFTLSTDYHISLVEDAVDGKNINTCGAK 1009
Score = 69.3 bits (168), Expect = 1e-12
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
+ F+ A+DGLLL+ G++ DF+SL + +L F +N G+GVA I+ G W
Sbjct: 413 LEFRAEAEDGLLLYCGENE-HGRGDFMSLAIIRRSLQFRFNCGTGVAIIVSETKIKLGGW 471
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEI-----ALHTNRQY 115
H V RDG +G + +++ TG+S G ++ LY+GG A TN
Sbjct: 472 HTVMLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGGAPSAYWLVRATGTN--- 528
Query: 116 MRGLVGCISHFTLS---TDYHISLVEDAVDGKNINTCGA 151
RG GC+ ++ D + A+ G ++ C +
Sbjct: 529 -RGFQGCVQSLAVNGRRIDMRPWPLGKALSGADVGECSS 566
Score = 56.6 bits (135), Expect = 8e-09
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Query: 3 FKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHR 62
F+ + DG+LL+ D+ + DF+S+ L G + F ++ GSG + G WH
Sbjct: 641 FRPDSGDGVLLYSYDTGSK---DFLSINLAGGHVEFRFDCGSGTGVLRSEDPLTLGNWHE 697
Query: 63 VKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEI-ALHTNRQYMRGLVG 121
++ R ++G + VD G + G Q+ N +++GG+ + N ++ G
Sbjct: 698 LRVSRTAKNGILQVDKQKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGVLKPFSG 757
Query: 122 CISHFTLSTDYHISLVEDAVDGKNI 146
I L+ D I + D G N+
Sbjct: 758 SIQKIILN-DRTIHVKHDFTSGVNV 781
>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
Length = 4391
Score = 110 bits (274), Expect = 6e-25
Identities = 54/130 (41%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Query: 1 MRFKTTAKDGLLLWRGDS--PMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDG 58
+ +T+ GLLLW+G DFISLGL+DG LVF Y LGSG A ++ NDG
Sbjct: 4232 LEVRTSTASGLLLWQGVEVGEAGQGKDFISLGLQDGHLVFRYQLGSGEARLVSEDPINDG 4291
Query: 59 RWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRG 118
WHRV A+R+G+ G I VD +G+SPG +N G++Y+GG ++A T ++ G
Sbjct: 4292 EWHRVTALREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGGAPDVATLTGGRFSSG 4351
Query: 119 LVGCISHFTL 128
+ GC+ + L
Sbjct: 4352 ITGCVKNLVL 4361
Score = 72.4 bits (176), Expect = 1e-13
Identities = 48/128 (37%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
+ FK A DG+LL+ G P DF+SL + G L F Y LGSG+A + GRW
Sbjct: 3955 VEFKPLAPDGVLLFSGGKS-GPVEDFVSLAMVGGHLEFRYELGSGLAVLRSAEPLALGRW 4013
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMK---EIALHTNRQ-YM 116
HRV A R + G + V+ SPG + LN++ LY+GG++ ++ TN +
Sbjct: 4014 HRVSAERLNKDGSLRVNGGRPVLRSSPGKSQGLNLHTLLYLGGVEPSVPLSPATNMSAHF 4073
Query: 117 RGLVGCIS 124
RG VG +S
Sbjct: 4074 RGCVGEVS 4081
Score = 62.8 bits (151), Expect = 1e-10
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Query: 3 FKTTAKDGLLLWRGDS--PMRPNS------DFISLGLRDGALVFSYNLGSGVASIMVNGS 54
F+ + DG+LL+ G P P + DFIS GL G F ++ GSG+A+I
Sbjct: 3692 FRPDSADGMLLYNGQKRVPGSPTNLANRQPDFISFGLVGGRPEFRFDAGSGMATIRHPTP 3751
Query: 55 FNDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQ 114
G +H V +R G + V D G S G + L++N LY+GG +
Sbjct: 3752 LALGHFHTVTLLRSLTQGSLIVGDLAPVNGTSQGKFQGLDLNEELYLGGYPDYGAIPKAG 3811
Query: 115 YMRGLVGCI 123
G +GC+
Sbjct: 3812 LSSGFIGCV 3820
>gi|54873613 agrin [Homo sapiens]
Length = 2045
Score = 83.2 bits (204), Expect = 8e-17
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 5/151 (3%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
+ +T A GL+LW G + R +D+++L + DG L SYNLGS + N RW
Sbjct: 1895 LSLRTEATQGLVLWSGKATER--ADYVALAIVDGHLQLSYNLGSQPVVLRSTVPVNTNRW 1952
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIAL--HTNRQYMRG 118
RV A R+ + G + V + TG SP QL+ +GAL++GG+ E+ + + Y G
Sbjct: 1953 LRVVAHREQREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLPELPVGPALPKAYGTG 2012
Query: 119 LVGCISHFTLSTDYHISLVEDAVDGKNINTC 149
VGC+ + + + L+EDAV + C
Sbjct: 2013 FVGCLRDVVVGR-HPLHLLEDAVTKPELRPC 2042
Score = 64.3 bits (155), Expect = 4e-11
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
+ F+ GLLL+ G++ DF++L L DG + ++ GSG A + G+W
Sbjct: 1398 LEFRALEPQGLLLYNGNAR---GKDFLALALLDGRVQLRFDTGSGPAVLTSAVPVEPGQW 1454
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKE--IALHTNRQYM-R 117
HR++ R + G ++VD G+SP LN++ L+VGG+ E A+ R ++
Sbjct: 1455 HRLELSRHWRRGTLSVDGETPVLGESPSGTDGLNLDTDLFVGGVPEDQAAVALERTFVGA 1514
Query: 118 GLVGCI 123
GL GCI
Sbjct: 1515 GLRGCI 1520
Score = 64.3 bits (155), Expect = 4e-11
Identities = 40/106 (37%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 3 FKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHR 62
F GLLL+ G DF+SL LRD L F Y+LG G A I G W R
Sbjct: 1668 FLARGPSGLLLYNGQKT-DGKGDFVSLALRDRRLEFRYDLGKGAAVIRSREPVTLGAWTR 1726
Query: 63 VKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIA 108
V R+G+ G + V D G+SP LN+ LYVGG + +
Sbjct: 1727 VSLERNGRKGALRVGDGPRVLGESPVPHTVLNLKEPLYVGGAPDFS 1772
>gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo
sapiens]
Length = 3118
Score = 69.3 bits (168), Expect = 1e-12
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
+ +T A+ GLL + ++DF ++ LR+G FSY+LGSG M+ NDG+W
Sbjct: 2787 LEVRTEAESGLLFYMARIN---HADFATVQLRNGLPYFSYDLGSGDTHTMIPTKINDGQW 2843
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGM 104
H++K +R Q G + VD RT SP L++ G LYVGG+
Sbjct: 2844 HKIKIMRSKQEGILYVDGASNRT-ISPKKADILDVVGMLYVGGL 2886
Score = 57.4 bits (137), Expect = 5e-09
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 2 RFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWH 61
+F+T + LL++ +R DF+S+ L DG + SY+LGSG+AS++ N + NDG+W
Sbjct: 2367 KFRTFSSSALLMYLATRDLR---DFMSVELTDGHIKVSYDLGSGMASVVSNQNHNDGKWK 2423
Query: 62 RVKAVRDGQSGKITVDDYG-------ARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQ 114
R + I++ D A + L + +Y GG+ +
Sbjct: 2424 SFTLSRIQKQANISIVDIDTNQEENIATSSSGNNFGLDLKADDKIYFGGLPTLRNLRPEV 2483
Query: 115 YMRGLVGCISHFTLS-TDYHISLVEDAV 141
++ GC+ +S T Y+I D V
Sbjct: 2484 NLKKYSGCLKDIEISRTPYNILSSPDYV 2511
Score = 44.7 bits (104), Expect = 3e-05
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 4 KTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASI-MVNGSFNDGRWHR 62
KT D LL + G + DF+++ +R G + F +++GSGV + + + +D W+R
Sbjct: 2175 KTAVADNLLFYLGSAKF---IDFLAIEMRKGKVSFLWDVGSGVGRVEYPDLTIDDSYWYR 2231
Query: 63 VKAVRDGQSGKITVDDYGA----------RTGKSPG-MMRQLNINGALYVGGM 104
+ A R G++G I+V + PG + ++ N L+VGG+
Sbjct: 2232 IVASRTGRNGTISVRALDGPKASIVPSTHHSTSPPGYTILDVDANAMLFVGGL 2284
Score = 39.3 bits (90), Expect = 0.001
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 3 FKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSG----VASIMVNGSFNDG 58
F+TT G+LL M D + + + D L+F + G+G V V G DG
Sbjct: 2964 FRTTTTTGVLLGISSQKM----DGMGIEMIDEKLMFHVDNGAGRFTAVYDAGVPGHLCDG 3019
Query: 59 RWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGG----MKEIALHTNRQ 114
+WH+V A + ++TVD + N ++VGG +K+ L T+
Sbjct: 3020 QWHKVTANKIKHRIELTVDGNQVEAQSPNPASTSADTNDPVFVGGFPDDLKQFGLTTSIP 3079
Query: 115 YMRGLVGCISHFTLS 129
+ GCI L+
Sbjct: 3080 FR----GCIRSLKLT 3090
>gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo
sapiens]
Length = 3122
Score = 69.3 bits (168), Expect = 1e-12
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
+ +T A+ GLL + ++DF ++ LR+G FSY+LGSG M+ NDG+W
Sbjct: 2791 LEVRTEAESGLLFYMARIN---HADFATVQLRNGLPYFSYDLGSGDTHTMIPTKINDGQW 2847
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGM 104
H++K +R Q G + VD RT SP L++ G LYVGG+
Sbjct: 2848 HKIKIMRSKQEGILYVDGASNRT-ISPKKADILDVVGMLYVGGL 2890
Score = 54.7 bits (130), Expect = 3e-08
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 15/152 (9%)
Query: 2 RFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWH 61
+F+T + LL++ +R DF+S+ L DG + SY+LGSG+AS++ N + NDG+W
Sbjct: 2367 KFRTFSSSALLMYLATRDLR---DFMSVELTDGHIKVSYDLGSGMASVVSNQNHNDGKWK 2423
Query: 62 RVKAVRDGQSGKITVDDYG-------ARTGKSPGMMRQLNINGALYVGG---MKEIALHT 111
R + I++ D A + L + +Y GG ++ +++
Sbjct: 2424 SFTLSRIQKQANISIVDIDTNQEENIATSSSGNNFGLDLKADDKIYFGGLPTLRNLSMKA 2483
Query: 112 NRQY-MRGLVGCISHFTLS-TDYHISLVEDAV 141
+ ++ GC+ +S T Y+I D V
Sbjct: 2484 RPEVNLKKYSGCLKDIEISRTPYNILSSPDYV 2515
Score = 44.7 bits (104), Expect = 3e-05
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 4 KTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASI-MVNGSFNDGRWHR 62
KT D LL + G + DF+++ +R G + F +++GSGV + + + +D W+R
Sbjct: 2175 KTAVADNLLFYLGSAKF---IDFLAIEMRKGKVSFLWDVGSGVGRVEYPDLTIDDSYWYR 2231
Query: 63 VKAVRDGQSGKITVDDYGA----------RTGKSPG-MMRQLNINGALYVGGM 104
+ A R G++G I+V + PG + ++ N L+VGG+
Sbjct: 2232 IVASRTGRNGTISVRALDGPKASIVPSTHHSTSPPGYTILDVDANAMLFVGGL 2284
Score = 39.3 bits (90), Expect = 0.001
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 3 FKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSG----VASIMVNGSFNDG 58
F+TT G+LL M D + + + D L+F + G+G V V G DG
Sbjct: 2968 FRTTTTTGVLLGISSQKM----DGMGIEMIDEKLMFHVDNGAGRFTAVYDAGVPGHLCDG 3023
Query: 59 RWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGG----MKEIALHTNRQ 114
+WH+V A + ++TVD + N ++VGG +K+ L T+
Sbjct: 3024 QWHKVTANKIKHRIELTVDGNQVEAQSPNPASTSADTNDPVFVGGFPDDLKQFGLTTSIP 3083
Query: 115 YMRGLVGCISHFTLS 129
+ GCI L+
Sbjct: 3084 FR----GCIRSLKLT 3094
>gi|224451128 eyes shut homolog isoform 1 [Homo sapiens]
Length = 3144
Score = 62.4 bits (150), Expect = 1e-10
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 25 DFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRVKAVRDGQSGKITVDDYGARTG 84
DF+++GL +G++V+SYNLGSG+ASI H V + Q G + VDD+ ++
Sbjct: 2476 DFLAVGLLNGSVVYSYNLGSGIASIRSEPLNLSLGVHTVHLGKFFQEGWLKVDDHKNKSI 2535
Query: 85 KSPGMMRQLNINGALYVGGMKEIA---LHTNRQYMRGLVGCISHFTL 128
+PG + LN+ YVGG E L + G GCI FTL
Sbjct: 2536 IAPGRLVGLNVFSQFYVGGYSEYTPDLLPNGADFKNGFQGCI--FTL 2580
Score = 55.5 bits (132), Expect = 2e-08
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSG--VASIMVNGSFNDG 58
++F+ A DG+L + + DF+ + L + ++ YNLG + + + N
Sbjct: 2722 LQFQPLAADGILFYAAQHLKAQSGDFLCISLVNSSVQLRYNLGDRTIILETLQKVTINGS 2781
Query: 59 RWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMR- 117
WH +KA R G G + +D T K+ M L+ N Y+GG+ + L N +
Sbjct: 2782 TWHIIKAGRVGAEGYLDLDGINV-TEKASTKMSSLDTNTDFYIGGVSSLNL-VNPMAIEN 2839
Query: 118 ---GLVGCISHFTLSTDYHISLVE-DAVDGKNINTC 149
G GCI ++ + + L E A G N+ C
Sbjct: 2840 EPVGFQGCIRQVIIN-NQELQLTEFGAKGGSNVGDC 2874
Score = 46.6 bits (109), Expect = 8e-06
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMV--NGSFNDG 58
+ F TT +GL++W G + N DF+++GL + L + NLG ++ M NG+F
Sbjct: 2984 LNFSTTKTEGLIVWMGIAQNEEN-DFLAIGLHNQTLKIAVNLGERISVPMSYNNGTFCCN 3042
Query: 59 RWHRVKAVRDGQSGKITVDDYGARTGKSPGMMR--QLNINGALYVGGM---KEIALHTNR 113
+WH V +++ K +++ + LN +G Y+GG +++ + T
Sbjct: 3043 KWHHVVVIQNQTLIKAYINNSLILSEDIDPHKNFVALNYDGICYLGGFEYGRKVNIVTQE 3102
Query: 114 QYMRGLVGCI 123
+ VG I
Sbjct: 3103 IFKTNFVGKI 3112
>gi|14149613 neurexin 1 isoform alpha1 precursor [Homo sapiens]
Length = 1477
Score = 61.6 bits (148), Expect = 2e-10
Identities = 44/134 (32%), Positives = 62/134 (46%), Gaps = 16/134 (11%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMV---NGSFND 57
+ FKT ++GL+L G S +D+++L L++GA+ NLGSG +V NG FND
Sbjct: 310 LSFKTLQRNGLMLHTGKS-----ADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFND 364
Query: 58 GRWHRVKAVRD--GQSG------KITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIAL 109
WH VK R+ SG I+VD TG + L + YVGG A
Sbjct: 365 NAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTAD 424
Query: 110 HTNRQYMRGLVGCI 123
+GC+
Sbjct: 425 LPGSPVSNNFMGCL 438
Score = 55.8 bits (133), Expect = 1e-08
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
Query: 3 FKTTAKDGLLLWRGDSPMRPNS---------DFISLGLRDGALVFSYNLGSGVASIM-VN 52
F+TT +GL+L+ P DF ++ + DG L ++GSG I +
Sbjct: 508 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALL 567
Query: 53 GSFNDGRWHRVKAVRDGQSGKITVDDYGARTG-KSPGMMRQLNINGALYVGGMKE 106
NDG W+ V RDG+SG I+V+ RT +PG L+++ LY+GG+ E
Sbjct: 568 KKVNDGEWYHVDFQRDGRSGTISVNT--LRTPYTAPGESEILDLDDELYLGGLPE 620
Score = 50.8 bits (120), Expect = 4e-07
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 2 RFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIM--VNGSFNDGR 59
+FKTT+ DGL+L+ +DFI + L G L + ++LG+G I N ND +
Sbjct: 932 QFKTTSLDGLILYNSGD----GNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQ 987
Query: 60 WHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYM--- 116
WH V RD + D T + G R L++ LY+GG+ + + + +
Sbjct: 988 WHNVMISRDTSNLHTVKIDTKITTQITAG-ARNLDLKSDLYIGGVAKETYKSLPKLVHAK 1046
Query: 117 RGLVGCISHFTLS 129
G GC++ L+
Sbjct: 1047 EGFQGCLASVDLN 1059
Score = 50.1 bits (118), Expect = 7e-07
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 23/152 (15%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNL---------GSGVASIMV 51
+RF++ G+L+ + R ++D + L L G + + NL G ++
Sbjct: 744 LRFRSQRAYGILM---ATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETLFA 800
Query: 52 NGSFNDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHT 111
+ ND WH V+ VR G+S K+TVDD A TG+ G +L + E + T
Sbjct: 801 GYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNI-------ETGIIT 853
Query: 112 NRQYMRGL----VGCISHFTLSTDYHISLVED 139
R+Y+ + +G + T + +I L ++
Sbjct: 854 ERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKN 885
Score = 42.4 bits (98), Expect = 2e-04
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 2 RFKTTAKDGLLLWRGDSPMRPNSDFISLGL-RDGALVFSYNLGSGV-ASIMVNGSFNDGR 59
+ KT + GL+L+ D DF+ L L R G L S+++ A+++ + NDG
Sbjct: 57 QLKTRSARGLVLYFDDEGF---CDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGA 113
Query: 60 WHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGM 104
WH V+ R ++ + +D A+ + R + + L+VGG+
Sbjct: 114 WHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGL 158
Score = 37.0 bits (84), Expect = 0.006
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 3 FKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSG-VASIMVNGSFNDGRWH 61
F T K+ +L+ R DS D++ L + G + +N+G+ +A N NDG++H
Sbjct: 1156 FSTVQKEAVLV-RVDSSSGLG-DYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYH 1213
Query: 62 RVKAVRDGQSGKITVDDYGARTGKSPGMMRQL---NINGALYVGGMKE 106
V+ R G + + VD + G RQL N + +GG ++
Sbjct: 1214 VVRFTRSGGNATLQVDSWPVIERYPAG--RQLTIFNSQATIIIGGKEQ 1259
>gi|157419126 laminin, alpha 4 isoform 2 precursor [Homo sapiens]
Length = 1816
Score = 60.5 bits (145), Expect = 5e-10
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
+R +T + G++ + D + +DF++L L G LV+ +N+G I +NDG W
Sbjct: 1490 IRLRTRSSHGMIFYVSD---QEENDFMTLFLAHGRLVYMFNVGHKKLKIRSQEKYNDGLW 1546
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQY--MRG 118
H V +R+ SG++ +D P I G +Y+GG+ N Q +
Sbjct: 1547 HDVIFIRERSSGRLVIDGLRVLEESLPPTEATWKIKGPIYLGGVAPGKAVKNVQINSIYS 1606
Query: 119 LVGCISHFTLS 129
GC+S+ L+
Sbjct: 1607 FSGCLSNLQLN 1617
Score = 48.5 bits (114), Expect = 2e-06
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 14/137 (10%)
Query: 23 NSDFISLGLRDGALVFSYNLG--SGVASIMVNGSFNDGRWHRVKAVRDGQSGKITVDDYG 80
N +++++ +++G ++ N G S+ S DGRWHR+ +RD ++ VD
Sbjct: 1685 NGEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDS-E 1743
Query: 81 ARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLVGCISHFTLSTDYH------I 134
P + ++ ++VGG+ E L + GCI HF + D H
Sbjct: 1744 VNHVVGPLNPKPIDHREPVFVGGVPESLLTPRLAPSKPFTGCIRHFVI--DGHPVSFSKA 1801
Query: 135 SLVEDAVDGKNINTCGA 151
+LV AV +IN+C A
Sbjct: 1802 ALVSGAV---SINSCPA 1815
Score = 34.3 bits (77), Expect = 0.042
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 5 TTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNG---SFNDGRWH 61
T D +L+ G + +++ L +++ LV+ YNLG+ I ++ S +
Sbjct: 868 TETADQFILYLGSKNAK--KEYMGLAIKNDNLVYVYNLGTKDVEIPLDSKPVSSWPAYFS 925
Query: 62 RVKAVRDGQSGKI---------TVDDYGARTGKSPGMMRQLNI---NGALYVGGMKEIAL 109
VK R G+ GK+ T ++ + G+ G L++ + YVGG+
Sbjct: 926 IVKIERVGKHGKVFLTVPSLSSTAEEKFIKKGEFSGDDSLLDLDPEDTVFYVGGVPSNFK 985
Query: 110 HTNRQYMRGLVGCISHFTLSTD 131
+ G VGC+ TL+ D
Sbjct: 986 LPTSLNLPGFVGCLELATLNND 1007
>gi|157419124 laminin, alpha 4 isoform 1 precursor [Homo sapiens]
Length = 1823
Score = 60.5 bits (145), Expect = 5e-10
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
+R +T + G++ + D + +DF++L L G LV+ +N+G I +NDG W
Sbjct: 1497 IRLRTRSSHGMIFYVSD---QEENDFMTLFLAHGRLVYMFNVGHKKLKIRSQEKYNDGLW 1553
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQY--MRG 118
H V +R+ SG++ +D P I G +Y+GG+ N Q +
Sbjct: 1554 HDVIFIRERSSGRLVIDGLRVLEESLPPTEATWKIKGPIYLGGVAPGKAVKNVQINSIYS 1613
Query: 119 LVGCISHFTLS 129
GC+S+ L+
Sbjct: 1614 FSGCLSNLQLN 1624
Score = 48.5 bits (114), Expect = 2e-06
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 14/137 (10%)
Query: 23 NSDFISLGLRDGALVFSYNLG--SGVASIMVNGSFNDGRWHRVKAVRDGQSGKITVDDYG 80
N +++++ +++G ++ N G S+ S DGRWHR+ +RD ++ VD
Sbjct: 1692 NGEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDS-E 1750
Query: 81 ARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLVGCISHFTLSTDYH------I 134
P + ++ ++VGG+ E L + GCI HF + D H
Sbjct: 1751 VNHVVGPLNPKPIDHREPVFVGGVPESLLTPRLAPSKPFTGCIRHFVI--DGHPVSFSKA 1808
Query: 135 SLVEDAVDGKNINTCGA 151
+LV AV +IN+C A
Sbjct: 1809 ALVSGAV---SINSCPA 1822
Score = 34.3 bits (77), Expect = 0.042
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 5 TTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNG---SFNDGRWH 61
T D +L+ G + +++ L +++ LV+ YNLG+ I ++ S +
Sbjct: 875 TETADQFILYLGSKNAK--KEYMGLAIKNDNLVYVYNLGTKDVEIPLDSKPVSSWPAYFS 932
Query: 62 RVKAVRDGQSGKI---------TVDDYGARTGKSPGMMRQLNI---NGALYVGGMKEIAL 109
VK R G+ GK+ T ++ + G+ G L++ + YVGG+
Sbjct: 933 IVKIERVGKHGKVFLTVPSLSSTAEEKFIKKGEFSGDDSLLDLDPEDTVFYVGGVPSNFK 992
Query: 110 HTNRQYMRGLVGCISHFTLSTD 131
+ G VGC+ TL+ D
Sbjct: 993 LPTSLNLPGFVGCLELATLNND 1014
>gi|157419122 laminin, alpha 4 isoform 2 precursor [Homo sapiens]
Length = 1816
Score = 60.5 bits (145), Expect = 5e-10
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
+R +T + G++ + D + +DF++L L G LV+ +N+G I +NDG W
Sbjct: 1490 IRLRTRSSHGMIFYVSD---QEENDFMTLFLAHGRLVYMFNVGHKKLKIRSQEKYNDGLW 1546
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQY--MRG 118
H V +R+ SG++ +D P I G +Y+GG+ N Q +
Sbjct: 1547 HDVIFIRERSSGRLVIDGLRVLEESLPPTEATWKIKGPIYLGGVAPGKAVKNVQINSIYS 1606
Query: 119 LVGCISHFTLS 129
GC+S+ L+
Sbjct: 1607 FSGCLSNLQLN 1617
Score = 48.5 bits (114), Expect = 2e-06
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 14/137 (10%)
Query: 23 NSDFISLGLRDGALVFSYNLG--SGVASIMVNGSFNDGRWHRVKAVRDGQSGKITVDDYG 80
N +++++ +++G ++ N G S+ S DGRWHR+ +RD ++ VD
Sbjct: 1685 NGEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDS-E 1743
Query: 81 ARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLVGCISHFTLSTDYH------I 134
P + ++ ++VGG+ E L + GCI HF + D H
Sbjct: 1744 VNHVVGPLNPKPIDHREPVFVGGVPESLLTPRLAPSKPFTGCIRHFVI--DGHPVSFSKA 1801
Query: 135 SLVEDAVDGKNINTCGA 151
+LV AV +IN+C A
Sbjct: 1802 ALVSGAV---SINSCPA 1815
Score = 34.3 bits (77), Expect = 0.042
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 5 TTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNG---SFNDGRWH 61
T D +L+ G + +++ L +++ LV+ YNLG+ I ++ S +
Sbjct: 868 TETADQFILYLGSKNAK--KEYMGLAIKNDNLVYVYNLGTKDVEIPLDSKPVSSWPAYFS 925
Query: 62 RVKAVRDGQSGKI---------TVDDYGARTGKSPGMMRQLNI---NGALYVGGMKEIAL 109
VK R G+ GK+ T ++ + G+ G L++ + YVGG+
Sbjct: 926 IVKIERVGKHGKVFLTVPSLSSTAEEKFIKKGEFSGDDSLLDLDPEDTVFYVGGVPSNFK 985
Query: 110 HTNRQYMRGLVGCISHFTLSTD 131
+ G VGC+ TL+ D
Sbjct: 986 LPTSLNLPGFVGCLELATLNND 1007
>gi|208609951 neurexin 1 isoform alpha2 precursor [Homo sapiens]
Length = 1547
Score = 59.3 bits (142), Expect = 1e-09
Identities = 43/141 (30%), Positives = 62/141 (43%), Gaps = 23/141 (16%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMV---NGSFND 57
+ FKT ++GL+L G S +D+++L L++GA+ NLGSG +V NG FND
Sbjct: 343 LSFKTLQRNGLMLHTGKS-----ADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFND 397
Query: 58 GRWHRVKAVRDGQ---------------SGKITVDDYGARTGKSPGMMRQLNINGALYVG 102
WH VK R+ + S I+VD TG + L + YVG
Sbjct: 398 NAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYVG 457
Query: 103 GMKEIALHTNRQYMRGLVGCI 123
G A +GC+
Sbjct: 458 GSPSTADLPGSPVSNNFMGCL 478
Score = 55.8 bits (133), Expect = 1e-08
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
Query: 3 FKTTAKDGLLLWRGDSPMRPNS---------DFISLGLRDGALVFSYNLGSGVASIM-VN 52
F+TT +GL+L+ P DF ++ + DG L ++GSG I +
Sbjct: 548 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALL 607
Query: 53 GSFNDGRWHRVKAVRDGQSGKITVDDYGARTG-KSPGMMRQLNINGALYVGGMKE 106
NDG W+ V RDG+SG I+V+ RT +PG L+++ LY+GG+ E
Sbjct: 608 KKVNDGEWYHVDFQRDGRSGTISVNT--LRTPYTAPGESEILDLDDELYLGGLPE 660
Score = 50.8 bits (120), Expect = 4e-07
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 2 RFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIM--VNGSFNDGR 59
+FKTT+ DGL+L+ +DFI + L G L + ++LG+G I N ND +
Sbjct: 972 QFKTTSLDGLILYNSGD----GNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQ 1027
Query: 60 WHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYM--- 116
WH V RD + D T + G R L++ LY+GG+ + + + +
Sbjct: 1028 WHNVMISRDTSNLHTVKIDTKITTQITAG-ARNLDLKSDLYIGGVAKETYKSLPKLVHAK 1086
Query: 117 RGLVGCISHFTLS 129
G GC++ L+
Sbjct: 1087 EGFQGCLASVDLN 1099
Score = 50.1 bits (118), Expect = 7e-07
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 23/152 (15%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNL---------GSGVASIMV 51
+RF++ G+L+ + R ++D + L L G + + NL G ++
Sbjct: 784 LRFRSQRAYGILM---ATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETLFA 840
Query: 52 NGSFNDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHT 111
+ ND WH V+ VR G+S K+TVDD A TG+ G +L + E + T
Sbjct: 841 GYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNI-------ETGIIT 893
Query: 112 NRQYMRGL----VGCISHFTLSTDYHISLVED 139
R+Y+ + +G + T + +I L ++
Sbjct: 894 ERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKN 925
Score = 42.4 bits (98), Expect = 2e-04
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 2 RFKTTAKDGLLLWRGDSPMRPNSDFISLGL-RDGALVFSYNLGSGV-ASIMVNGSFNDGR 59
+ KT + GL+L+ D DF+ L L R G L S+++ A+++ + NDG
Sbjct: 57 QLKTRSARGLVLYFDDEGF---CDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGA 113
Query: 60 WHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGM 104
WH V+ R ++ + +D A+ + R + + L+VGG+
Sbjct: 114 WHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGL 158
Score = 35.8 bits (81), Expect = 0.014
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 3 FKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSG-VASIMVNGSFNDGRWH 61
F T K+ +L+ R DS D++ L + G + +N+G+ +A N NDG++H
Sbjct: 1196 FSTVQKEAVLV-RVDSSSGLG-DYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYH 1253
Query: 62 RVKAVRDGQSGKITVDDY 79
V+ R G + + VD +
Sbjct: 1254 VVRFTRSGGNATLQVDSW 1271
>gi|21166380 neurexin 2 isoform alpha-2 precursor [Homo sapiens]
Length = 1642
Score = 58.9 bits (141), Expect = 2e-09
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMV---NGSFND 57
+ F+T ++GL+L G S +D+++L L+ GA+ NLGSG +V NG FND
Sbjct: 292 LAFRTLQRNGLMLHTGKS-----ADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFND 346
Query: 58 GRWHRVKAVRDGQSG--------KITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIAL 109
WH V+ R+ + I+VD TG + L + Y+GG A
Sbjct: 347 NAWHDVRVTRNLRQHAGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTAD 406
Query: 110 HTNRQYMRGLVGCISHFTL-STDYHISLVEDAVDG 143
+GC+ + D+ + L A +G
Sbjct: 407 LPGSPVSNNFMGCLKDVVYKNNDFKLELSRLAKEG 441
Score = 55.5 bits (132), Expect = 2e-08
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 2 RFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGS--FNDGR 59
+FKTTA DGLLL+ + +DFI + L G + + ++LG+G + + N ND +
Sbjct: 905 QFKTTAPDGLLLFNSGN----GNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQ 960
Query: 60 WHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKE 106
WH V RD + D T S G R L++ G LY+GG+ +
Sbjct: 961 WHNVVVSRDPGNVHTLKIDSRTVTQHSNG-ARNLDLKGELYIGGLSK 1006
Score = 49.7 bits (117), Expect = 1e-06
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 3 FKTTAKDGLLLWR---------GDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNG 53
F+TT +GLLL+ G +D+ ++ L DG L ++GSG + +
Sbjct: 490 FRTTEPNGLLLFSQGRRAGGGAGSHSSAQRADYFAMELLDGHLYLLLDMGSGGIKLRASS 549
Query: 54 -SFNDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKE 106
NDG W V RDG+ G I+V+ + + G L++ LY+GG+ E
Sbjct: 550 RKVNDGEWCHVDFQRDGRKGSISVNS-RSTPFLATGDSEILDLESELYLGGLPE 602
Score = 46.2 bits (108), Expect = 1e-05
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
+RF + GL++ + R ++D + L L G + + NLG G ++ ND W
Sbjct: 727 LRFMSQRAYGLMM---ATTSRESADTLRLELDGGQMKLTVNLGKGPETLFAGHKLNDNEW 783
Query: 61 HRVKAVRDGQSGKITVDD 78
H V+ VR G+S +++VD+
Sbjct: 784 HTVRVVRRGKSLQLSVDN 801
Score = 43.1 bits (100), Expect = 9e-05
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 4 KTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGV-ASIMVNGSFNDGRWHR 62
+T A LLL+ D + DF+ L L DG L + L A++ ++ D RWH
Sbjct: 58 RTNATRALLLYLDDGG---DCDFLELLLVDGRLRLRFTLSCAEPATLQLDTPVADDRWHM 114
Query: 63 VKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGM 104
V RD + + VD AR + R++ + L+VGG+
Sbjct: 115 VLLTRDARRTALAVDG-EARAAEVRSKRREMQVASDLFVGGI 155
Score = 32.7 bits (73), Expect = 0.12
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 25 DFISLGLRDGALVFSYNLGSGVASI-MVNGSFNDGRWHRVKAVRDGQSGKITVDDYGART 83
D++ L + G + +N+G+ +I N +DG++H V+ R G + + VD +
Sbjct: 1149 DYLQLHIDQGTVGVIFNVGTDDITIDEPNAIVSDGKYHVVRFTRSGGNATLQVDSWPVNE 1208
Query: 84 GKSPGMMRQL---NINGALYVGG 103
G RQL N A+ +GG
Sbjct: 1209 RYPAG--RQLTIFNSQAAIKIGG 1229
>gi|38788416 laminin, alpha 1 precursor [Homo sapiens]
Length = 3075
Score = 58.2 bits (139), Expect = 3e-09
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASI-MVNGSFNDGR 59
+ KT D LL + G S SDF+++ +R G + F ++LGSG + + +D R
Sbjct: 2144 LNVKTQEPDNLLFYLGSSTA---SDFLAVEMRRGRVAFLWDLGSGSTRLEFPDFPIDDNR 2200
Query: 60 WHRVKAVRDGQSGKITVDDYGA------RTGKSPGMMRQLNINGA--LYVGGM 104
WH + R G G ++V + + +T KSPG L++N + ++VGG+
Sbjct: 2201 WHSIHVARFGNIGSLSVKEMSSNQKSPTKTSKSPGTANVLDVNNSTLMFVGGL 2253
Score = 58.2 bits (139), Expect = 3e-09
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
M F T + +GLLL+ G + DF+S+ L G + +LGSG +++ + +N+G W
Sbjct: 2331 MLFNTFSPNGLLLYLGSYGTK---DFLSIELFRGRVKVMTDLGSGPITLLTDRRYNNGTW 2387
Query: 61 HRVKAVRDGQSGKITV-DDYG-----ARTGKSPGMMRQLN--INGALYVGGMKEIALHTN 112
+++ R+ + G + V D Y + G++PG LN +YVGG+ +
Sbjct: 2388 YKIAFQRNRKQGVLAVIDAYNTSNKETKQGETPGASSDLNRLDKDPIYVGGLPRSRVVRR 2447
Query: 113 RQYMRGLVGCISHFTLS 129
+ VGCI + +S
Sbjct: 2448 GVTTKSFVGCIKNLEIS 2464
Score = 51.6 bits (122), Expect = 3e-07
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
+ +T A GL+ + + +D+ L L G L F ++LG G + +DG+W
Sbjct: 2741 LSIRTFASSGLIYYMAH---QNQADYAVLQLHGGRLHFMFDLGKGRTKVSHPALLSDGKW 2797
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLV 120
H VK + G ITVD + G L++ G Y+GG+ QY +
Sbjct: 2798 HTVKTDYVKRKGFITVDGRESPMVTVVGDGTMLDVEGLFYLGGLPS-------QYQARKI 2850
Query: 121 GCISH 125
G I+H
Sbjct: 2851 GNITH 2855
Score = 38.9 bits (89), Expect = 0.002
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGS----FN 56
+ F+T++++G+LL + + D I L L DG ++F N G+G +
Sbjct: 2918 LEFRTSSQNGVLLGISTAKV----DAIGLELVDGKVLFHVNNGAGRITAAYEPKTATVLC 2973
Query: 57 DGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGG 103
DG+WH ++A + + VD ++ N +YVGG
Sbjct: 2974 DGKWHTLQANKSKHRITLIVDGNAVGAESPHTQSTSVDTNNPIYVGG 3020
>gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens]
Length = 3333
Score = 57.4 bits (137), Expect = 5e-09
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 4 KTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRV 63
+TT+ GL+ G + F++L L G LVF+ I NDG+WH V
Sbjct: 3017 QTTSSRGLVFHTGTK-----NSFMALYLSKGRLVFALGTDGKKLRIKSKEKCNDGKWHTV 3071
Query: 64 KAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGM---KEIALHTNRQYMRGLV 120
DG+ G++ VD AR G PG ++I +Y+G K +L TN V
Sbjct: 3072 VFGHDGEKGRLVVDGLRAREGSLPG-NSTISIRAPVYLGSPPSGKPKSLPTN-----SFV 3125
Query: 121 GCISHFTLST 130
GC+ +F L +
Sbjct: 3126 GCLKNFQLDS 3135
Score = 29.3 bits (64), Expect = 1.4
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 4 KTTAKDGLLLWRGDSPMRPNSD-FISLGLRDGALVFSYNLGSGVASIM-VNGSFNDGRWH 61
+TT GLL + N D FISL + DG L+ Y L S + V + N+GR H
Sbjct: 2627 QTTVDRGLLFFA------ENGDRFISLNIEDGKLMVRYKLNSELPKERGVGDAINNGRDH 2680
Query: 62 RVK 64
++
Sbjct: 2681 SIQ 2683
>gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens]
Length = 1668
Score = 57.4 bits (137), Expect = 5e-09
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 4 KTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRV 63
+TT+ GL+ G + F++L L G LVF+ I NDG+WH V
Sbjct: 1352 QTTSSRGLVFHTGTK-----NSFMALYLSKGRLVFALGTDGKKLRIKSKEKCNDGKWHTV 1406
Query: 64 KAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGM---KEIALHTNRQYMRGLV 120
DG+ G++ VD AR G PG ++I +Y+G K +L TN V
Sbjct: 1407 VFGHDGEKGRLVVDGLRAREGSLPG-NSTISIRAPVYLGSPPSGKPKSLPTN-----SFV 1460
Query: 121 GCISHFTLST 130
GC+ +F L +
Sbjct: 1461 GCLKNFQLDS 1470
Score = 29.3 bits (64), Expect = 1.4
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 4 KTTAKDGLLLWRGDSPMRPNSD-FISLGLRDGALVFSYNLGSGVASIM-VNGSFNDGRWH 61
+TT GLL + N D FISL + DG L+ Y L S + V + N+GR H
Sbjct: 962 QTTVDRGLLFFA------ENGDRFISLNIEDGKLMVRYKLNSELPKERGVGDAINNGRDH 1015
Query: 62 RVK 64
++
Sbjct: 1016 SIQ 1018
>gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens]
Length = 3277
Score = 57.4 bits (137), Expect = 5e-09
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 4 KTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRV 63
+TT+ GL+ G + F++L L G LVF+ I NDG+WH V
Sbjct: 2961 QTTSSRGLVFHTGTK-----NSFMALYLSKGRLVFALGTDGKKLRIKSKEKCNDGKWHTV 3015
Query: 64 KAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGM---KEIALHTNRQYMRGLV 120
DG+ G++ VD AR G PG ++I +Y+G K +L TN V
Sbjct: 3016 VFGHDGEKGRLVVDGLRAREGSLPG-NSTISIRAPVYLGSPPSGKPKSLPTN-----SFV 3069
Query: 121 GCISHFTLST 130
GC+ +F L +
Sbjct: 3070 GCLKNFQLDS 3079
Score = 29.3 bits (64), Expect = 1.4
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 4 KTTAKDGLLLWRGDSPMRPNSD-FISLGLRDGALVFSYNLGSGVASIM-VNGSFNDGRWH 61
+TT GLL + N D FISL + DG L+ Y L S + V + N+GR H
Sbjct: 2571 QTTVDRGLLFFA------ENGDRFISLNIEDGKLMVRYKLNSELPKERGVGDAINNGRDH 2624
Query: 62 RVK 64
++
Sbjct: 2625 SIQ 2627
>gi|38045908 laminin alpha 3 subunit isoform 2 [Homo sapiens]
Length = 1724
Score = 57.4 bits (137), Expect = 5e-09
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 4 KTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRV 63
+TT+ GL+ G + F++L L G LVF+ I NDG+WH V
Sbjct: 1408 QTTSSRGLVFHTGTK-----NSFMALYLSKGRLVFALGTDGKKLRIKSKEKCNDGKWHTV 1462
Query: 64 KAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGM---KEIALHTNRQYMRGLV 120
DG+ G++ VD AR G PG ++I +Y+G K +L TN V
Sbjct: 1463 VFGHDGEKGRLVVDGLRAREGSLPG-NSTISIRAPVYLGSPPSGKPKSLPTN-----SFV 1516
Query: 121 GCISHFTLST 130
GC+ +F L +
Sbjct: 1517 GCLKNFQLDS 1526
Score = 29.3 bits (64), Expect = 1.4
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 4 KTTAKDGLLLWRGDSPMRPNSD-FISLGLRDGALVFSYNLGSGVASIM-VNGSFNDGRWH 61
+TT GLL + N D FISL + DG L+ Y L S + V + N+GR H
Sbjct: 1018 QTTVDRGLLFFA------ENGDRFISLNIEDGKLMVRYKLNSELPKERGVGDAINNGRDH 1071
Query: 62 RVK 64
++
Sbjct: 1072 SIQ 1074
>gi|21070969 neurexin 3 isoform 1 precursor [Homo sapiens]
Length = 1061
Score = 56.6 bits (135), Expect = 8e-09
Identities = 49/158 (31%), Positives = 80/158 (50%), Gaps = 23/158 (14%)
Query: 3 FKTTAKDGLLLW-------RGDSPMRPNS--DFISLGLRDGALVFSYNLGSGVASIMVNG 53
F+TT +GL+L+ R D+ + N+ DF ++ L DG L ++GSG +
Sbjct: 102 FRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQ 161
Query: 54 S-FNDGRWHRVKAVRDGQSGKITVDDYGARTG-KSPGMMRQLNINGALYVGGMKEIALHT 111
NDG W+ V RDG+SG I+V+ RT + G L++ G +Y+GG+ E
Sbjct: 162 KKANDGEWYHVDIQRDGRSGTISVN--SRRTPFTASGESEILDLEGDMYLGGLPE----- 214
Query: 112 NRQYMRGLVGCISHFTLSTDY-HISLVEDA-VDGKNIN 147
NR GL+ +T +Y ++ + D +DG++ N
Sbjct: 215 NR---AGLILPTELWTAMLNYGYVGCIRDLFIDGRSKN 249
Score = 48.5 bits (114), Expect = 2e-06
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 2 RFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGS--FNDGR 59
+FKTT+ DG +L+ +DFI++ L G + + ++LG+G I N ND +
Sbjct: 525 QFKTTSPDGFILFNSGD----GNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQ 580
Query: 60 WHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYM--- 116
WH V RD + D T G + L++ G LY+ G+ + +++N +
Sbjct: 581 WHNVVITRDNSNTHSLKVDTKVVTQVING-AKNLDLKGDLYMAGLAQ-GMYSNLPKLVAS 638
Query: 117 -RGLVGCISHFTLS 129
G GC++ L+
Sbjct: 639 RDGFQGCLASVDLN 652
Score = 43.9 bits (102), Expect = 5e-05
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 3 FKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGS-FNDGRWH 61
F TT KDG+L+ +P DF+ L + G + +N+G+ SI + NDG++H
Sbjct: 749 FSTTVKDGILVRIDSAPGL--GDFLQLHIEQGKIGVVFNIGTVDISIKEERTPVNDGKYH 806
Query: 62 RVKAVRDGQSGKITVDDYGARTGKSPGMMRQL---NINGALYVGG 103
V+ R+G + + VD++ G RQL N + +GG
Sbjct: 807 VVRFTRNGGNATLQVDNWPVNEHYPTG--RQLTIFNTQAQIAIGG 849
Score = 39.3 bits (90), Expect = 0.001
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 12/86 (13%)
Query: 2 RFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNL---------GSGVASIMVN 52
RF + GLL+ + R ++D + L L G + NL G ++
Sbjct: 339 RFMSQRAYGLLV---ATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGPETLYAG 395
Query: 53 GSFNDGRWHRVKAVRDGQSGKITVDD 78
ND WH V+ VR G+S K+TVDD
Sbjct: 396 QKLNDNEWHTVRVVRRGKSLKLTVDD 421
>gi|14211536 neurexin 2 isoform alpha-1 precursor [Homo sapiens]
Length = 1712
Score = 56.2 bits (134), Expect = 1e-08
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 24/162 (14%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMV---NGSFND 57
+ F+T ++GL+L G S +D+++L L+ GA+ NLGSG +V NG FND
Sbjct: 316 LAFRTLQRNGLMLHTGKS-----ADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFND 370
Query: 58 GRWHRVKAVRDGQSG---------------KITVDDYGARTGKSPGMMRQLNINGALYVG 102
WH V+ R+ + I+VD TG + L + Y+G
Sbjct: 371 NAWHDVRVTRNLRQHAGIGHAMVNKLHYLVTISVDGILTTTGYTQEDYTMLGSDDFFYIG 430
Query: 103 GMKEIALHTNRQYMRGLVGCISHFTL-STDYHISLVEDAVDG 143
G A +GC+ + D+ + L A +G
Sbjct: 431 GSPNTADLPGSPVSNNFMGCLKDVVYKNNDFKLELSRLAKEG 472
Score = 55.5 bits (132), Expect = 2e-08
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 2 RFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGS--FNDGR 59
+FKTTA DGLLL+ + +DFI + L G + + ++LG+G + + N ND +
Sbjct: 945 QFKTTAPDGLLLFNSGN----GNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQ 1000
Query: 60 WHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKE 106
WH V RD + D T S G R L++ G LY+GG+ +
Sbjct: 1001 WHNVVVSRDPGNVHTLKIDSRTVTQHSNG-ARNLDLKGELYIGGLSK 1046
Score = 49.7 bits (117), Expect = 1e-06
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 3 FKTTAKDGLLLWR---------GDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNG 53
F+TT +GLLL+ G +D+ ++ L DG L ++GSG + +
Sbjct: 521 FRTTEPNGLLLFSQGRRAGGGAGSHSSAQRADYFAMELLDGHLYLLLDMGSGGIKLRASS 580
Query: 54 -SFNDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKE 106
NDG W V RDG+ G I+V+ + + G L++ LY+GG+ E
Sbjct: 581 RKVNDGEWCHVDFQRDGRKGSISVNS-RSTPFLATGDSEILDLESELYLGGLPE 633
Score = 43.1 bits (100), Expect = 9e-05
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 4 KTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGV-ASIMVNGSFNDGRWHR 62
+T A LLL+ D + DF+ L L DG L + L A++ ++ D RWH
Sbjct: 58 RTNATRALLLYLDDGG---DCDFLELLLVDGRLRLRFTLSCAEPATLQLDTPVADDRWHM 114
Query: 63 VKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGM 104
V RD + + VD AR + R++ + L+VGG+
Sbjct: 115 VLLTRDARRTALAVDG-EARAAEVRSKRREMQVASDLFVGGI 155
Score = 36.2 bits (82), Expect = 0.011
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNL---------GSGVASIMV 51
+RF + GL++ + R ++D + L L G + + NL G ++
Sbjct: 758 LRFMSQRAYGLMM---ATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPSKGPETLFA 814
Query: 52 NGSFNDGRWHRVKAVRDGQSGKITVDD 78
ND WH V+ VR G+S +++VD+
Sbjct: 815 GHKLNDNEWHTVRVVRRGKSLQLSVDN 841
Score = 30.0 bits (66), Expect = 0.79
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 25 DFISLGLRDGALVFSYNLGSGVASI-MVNGSFNDGRWHRVKAVRDGQSGKITVDDY 79
D++ L + G + +N+G+ +I N +DG++H V+ R G + + VD +
Sbjct: 1189 DYLQLHIDQGTVGVIFNVGTDDITIDEPNAIVSDGKYHVVRFTRSGGNATLQVDSW 1244
>gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo
sapiens]
Length = 1235
Score = 56.2 bits (134), Expect = 1e-08
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 17/131 (12%)
Query: 3 FKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALV-FSYNLGSGVASIMVNGS--FNDGR 59
FKTTA G+ L +DFI + LR +V FS+++G+G I V FND +
Sbjct: 748 FKTTASSGVFLENLGI-----ADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQ 802
Query: 60 WHRVKAVRDGQSGKITVDDYGARTGKSPGMMR-QLNINGALYVGGMKEIALHTNRQYMRG 118
WH V+ R+ + + VD +T +P L +N L+VGG RQ RG
Sbjct: 803 WHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGT------ATRQ--RG 854
Query: 119 LVGCISHFTLS 129
+GCI L+
Sbjct: 855 FLGCIRSLQLN 865
Score = 42.4 bits (98), Expect = 2e-04
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLG-------SGVASIMVNG 53
++FKT DG+LL R PN D I+L LR L N G S + ++ +
Sbjct: 185 LKFKTMQSDGILLHREG----PNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGS 240
Query: 54 SFNDGRWHRVKAVRDGQSGKITVDDY 79
+D WH V R G+ TVD++
Sbjct: 241 LLDDQHWHSVLIQRLGKQVNFTVDEH 266
Score = 38.5 bits (88), Expect = 0.002
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 6/130 (4%)
Query: 2 RFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFS-YNLGSGVASIMVNGSFNDGRW 60
+F+T K GLLL+ S ++ S I L L DG L + Y G + I NDG+W
Sbjct: 324 QFRTWNKAGLLLF---SELQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVELNDGQW 380
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTN-RQYMRGL 119
H V + VD A G Q+ G Y GG + + + + + G
Sbjct: 381 HSVSLSAKKNHLSVAVDGQMASAAPLLG-PEQIYSGGTYYFGGCPDKSFGSKCKSPLGGF 439
Query: 120 VGCISHFTLS 129
GC+ ++S
Sbjct: 440 QGCMRLISIS 449
>gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo
sapiens]
Length = 1308
Score = 56.2 bits (134), Expect = 1e-08
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 17/131 (12%)
Query: 3 FKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALV-FSYNLGSGVASIMVNGS--FNDGR 59
FKTTA G+ L +DFI + LR +V FS+++G+G I V FND +
Sbjct: 821 FKTTASSGVFLENLGI-----ADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQ 875
Query: 60 WHRVKAVRDGQSGKITVDDYGARTGKSPGMMR-QLNINGALYVGGMKEIALHTNRQYMRG 118
WH V+ R+ + + VD +T +P L +N L+VGG RQ RG
Sbjct: 876 WHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGT------ATRQ--RG 927
Query: 119 LVGCISHFTLS 129
+GCI L+
Sbjct: 928 FLGCIRSLQLN 938
Score = 42.7 bits (99), Expect = 1e-04
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 12/111 (10%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLG-------SGVASIMVNG 53
++FKT DG+LL R PN D I+L LR L N G S + ++ +
Sbjct: 210 LKFKTMQSDGILLHREG----PNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGS 265
Query: 54 SFNDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGM 104
+D WH V R G+ TVD++ + G +N++ + GG+
Sbjct: 266 LLDDQHWHSVLIQRLGKQVNFTVDEH-RHHFHARGEFNLMNLDYEISFGGI 315
Score = 38.5 bits (88), Expect = 0.002
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 6/130 (4%)
Query: 2 RFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFS-YNLGSGVASIMVNGSFNDGRW 60
+F+T K GLLL+ S ++ S I L L DG L + Y G + I NDG+W
Sbjct: 397 QFRTWNKAGLLLF---SELQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVELNDGQW 453
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTN-RQYMRGL 119
H V + VD A G Q+ G Y GG + + + + + G
Sbjct: 454 HSVSLSAKKNHLSVAVDGQMASAAPLLG-PEQIYSGGTYYFGGCPDKSFGSKCKSPLGGF 512
Query: 120 VGCISHFTLS 129
GC+ ++S
Sbjct: 513 QGCMRLISIS 522
>gi|4505463 contactin associated protein 1 precursor [Homo sapiens]
Length = 1384
Score = 55.8 bits (133), Expect = 1e-08
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 3 FKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGS-------GVASIMVNGSF 55
FKT KDGLLL + D+++L L L+ +LGS G ++ G
Sbjct: 203 FKTEEKDGLLLHAEGA----QGDYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSAGGVL 258
Query: 56 NDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQY 115
ND WH V+ R G+ T+D Y R + G +LN++ +++GG+ A N Y
Sbjct: 259 NDQHWHYVRVDRFGRDVNFTLDGYVQRFILN-GDFERLNLDTEMFIGGLVG-AARKNLAY 316
Query: 116 MRGLVGCISH 125
GCI +
Sbjct: 317 RHNFRGCIEN 326
Score = 35.0 bits (79), Expect = 0.025
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 3 FKTTAKDGLLLWRGDSPM----RPNSDFISLGLRDGA-LVFSYNLGSGVASIMVNGS--- 54
F+T+A G+ L P RP ++ + L +VF++++G+G ++ V+
Sbjct: 813 FRTSAPSGVFLENMGGPYCQWRRP---YVRVELNTSRDVVFAFDVGNGDENLTVHSDDFE 869
Query: 55 FNDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQ 114
FND WH V+A +I V R P ++R + + +++ + + + +
Sbjct: 870 FNDDEWHLVRA-------EINVKQARLRVDHRPWVLRPMPLQTYIWMEYDQPLYVGSAEL 922
Query: 115 YMRGLVGCISHFTLS 129
R VGC+ L+
Sbjct: 923 KRRPFVGCLRAMRLN 937
Score = 28.9 bits (63), Expect = 1.8
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Query: 2 RFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSY-NLGSGVASIMVNGSFNDGRW 60
RF+T GLLL+ S + + L L +G + S G NDG W
Sbjct: 388 RFRTWDLTGLLLF---SRLGDGLGHVELTLSEGQVNVSIAQSGRKKLQFAAGYRLNDGFW 444
Query: 61 HRVKAVRDGQSGKITVDD 78
H V V I++DD
Sbjct: 445 HEVNFVAQENHAVISIDD 462
>gi|165932370 FAT tumor suppressor homolog 4 [Homo sapiens]
Length = 4981
Score = 55.1 bits (131), Expect = 2e-08
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 16/143 (11%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRW 60
++F T LLL+ D+ ++F++L + + L FSYNLGSG + +DG +
Sbjct: 4000 VKFATIKSHALLLYNYDNQTGDRAEFLALEIAEERLRFSYNLGSGTYKLTTMKKVSDGHF 4059
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNI-----------NGALYVGGMKEIAL 109
H V A R G + +TVD + PG N+ + VGG++ +
Sbjct: 4060 HTVIARRAGMAASLTVD--SCSENQEPGYCTVSNVAVSDDWTLDVQPNRVTVGGIRSLEP 4117
Query: 110 HTNRQ---YMRGLVGCISHFTLS 129
R+ VGCI F ++
Sbjct: 4118 ILQRRGHVESHDFVGCIMEFAVN 4140
Score = 28.5 bits (62), Expect = 2.3
Identities = 29/130 (22%), Positives = 62/130 (47%), Gaps = 16/130 (12%)
Query: 1 MRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSG--VASIMVNGSFNDG 58
++F+T +++G+L+ ++ +S++ ++ +++G + F+ + G V + DG
Sbjct: 4248 VKFRTRSENGVLIH-----IQESSNYTTVKIKNGKVYFTSDAGIAGKVERNIPEVYVADG 4302
Query: 59 RWHRVKAVRDGQSGKITVDDYGARTGKSP----GMMRQLNINGALYVGGMKEIALHTNRQ 114
WH ++G + ++VD R P G + L I+ +GG+ H + Q
Sbjct: 4303 HWHTFLIGKNGTATVLSVDRIYNRDIIHPTQDFGGLDVLTIS----LGGIPPNQAHRDAQ 4358
Query: 115 YMRGLVGCIS 124
G GCI+
Sbjct: 4359 -TAGFDGCIA 4367
>gi|239743797 PREDICTED: similar to cell recognition molecule CASPR3
[Homo sapiens]
Length = 944
Score = 52.8 bits (125), Expect = 1e-07
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 19/132 (14%)
Query: 3 FKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALV-FSYNLGSGVASIMVNGS--FNDGR 59
FKTT G+ + +DFI + LR V FS+++G+G + V FND +
Sbjct: 554 FKTTVSSGVFMENLGI-----TDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQ 608
Query: 60 WHRVKAVRDGQSGKITVDDYGARTGKSP--GMMRQLNINGALYVGGMKEIALHTNRQYMR 117
WH V+A R+ + + VD + +P G +R L +N L++GG RQ R
Sbjct: 609 WHHVRAERNVKGASLQVDQLPQKMQPAPADGHVR-LQLNSQLFIGGT------ATRQ--R 659
Query: 118 GLVGCISHFTLS 129
G +GCI L+
Sbjct: 660 GFLGCIRSLQLN 671
>gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1
[Homo sapiens]
Length = 1288
Score = 52.8 bits (125), Expect = 1e-07
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 19/132 (14%)
Query: 3 FKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALV-FSYNLGSGVASIMVNGS--FNDGR 59
FKTT G+ + +DFI + LR V FS+++G+G + V FND +
Sbjct: 821 FKTTVSSGVFMENLGI-----TDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQ 875
Query: 60 WHRVKAVRDGQSGKITVDDYGARTGKSP--GMMRQLNINGALYVGGMKEIALHTNRQYMR 117
WH V+A R+ + + VD + +P G +R L +N L++GG RQ R
Sbjct: 876 WHHVRAERNVKGASLQVDQLPQKMQPAPADGHVR-LQLNSQLFIGGT------ATRQ--R 926
Query: 118 GLVGCISHFTLS 129
G +GCI L+
Sbjct: 927 GFLGCIRSLQLN 938
Score = 34.7 bits (78), Expect = 0.032
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 8/129 (6%)
Query: 2 RFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFS-YNLGSGVASIMVNGSFNDGRW 60
+F+T + G LL+ ++ S L L+DG L S + G ++ NDG+W
Sbjct: 397 QFRTWNRAGHLLF---GELQRGSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQW 453
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTN-RQYMRGL 119
H V + VDD T P + ++ Y GG + + + + G
Sbjct: 454 HSVSFSAKWSHMNVVVDD---DTAVQPLVAVLIDSGDTYYFGGCLGNSSGSGCKSPLGGF 510
Query: 120 VGCISHFTL 128
GC+ T+
Sbjct: 511 QGCLRLITI 519
>gi|47519929 cell recognition molecule CASPR3 [Homo sapiens]
Length = 1288
Score = 52.8 bits (125), Expect = 1e-07
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 19/132 (14%)
Query: 3 FKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALV-FSYNLGSGVASIMVNGS--FNDGR 59
FKTT G+ + +DFI + LR V FS+++G+G + V FND +
Sbjct: 821 FKTTVSSGVFMENLGI-----TDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQ 875
Query: 60 WHRVKAVRDGQSGKITVDDYGARTGKSP--GMMRQLNINGALYVGGMKEIALHTNRQYMR 117
WH V+A R+ + + VD + +P G +R L +N L++GG RQ R
Sbjct: 876 WHHVRAERNVKGASLQVDQLPQKMQPAPADGHVR-LQLNSQLFIGGT------ATRQ--R 926
Query: 118 GLVGCISHFTLS 129
G +GCI L+
Sbjct: 927 GFLGCIRSLQLN 938
Score = 37.0 bits (84), Expect = 0.006
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 8/129 (6%)
Query: 2 RFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFS-YNLGSGVASIMVNGSFNDGRW 60
+F+T + G LL+ +R S L L+DG L S + G ++ NDG+W
Sbjct: 397 QFRTWNRAGHLLF---GELRRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAGLNDGQW 453
Query: 61 HRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTN-RQYMRGL 119
H V + VDD T P + ++ Y GG + + + + + G
Sbjct: 454 HSVSFSAKWSHMNVVVDD---DTAVQPLVAVLIDSGDTYYFGGCLDNSSGSGCKSPLGGF 510
Query: 120 VGCISHFTL 128
GC+ T+
Sbjct: 511 QGCLRLITI 519
>gi|66346693 FAT tumor suppressor 1 precursor [Homo sapiens]
Length = 4588
Score = 52.0 bits (123), Expect = 2e-07
Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 1 MRFKTTAKDGLLLW-RGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNG-SFNDG 58
MR +T + ++++ RG +D+ L + G L + ++ GSG + V NDG
Sbjct: 3857 MRLRTYSTHAVVMYARG-------TDYSILEIHHGRLQYKFDCGSGPGIVSVQSIQVNDG 3909
Query: 59 RWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGG-MKEIALHTNR--QY 115
+WH V +G ++ +D +G +PG ++ LN++ ++ GG +++ R Q
Sbjct: 3910 QWHAVALEVNGNYARLVLDQVHTASGTAPGTLKTLNLDNYVFFGGHIRQQGTRHGRSPQV 3969
Query: 116 MRGLVGCISHFTLS 129
G GC+ L+
Sbjct: 3970 GNGFRGCMDSIYLN 3983
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.138 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,506,354
Number of Sequences: 37866
Number of extensions: 217135
Number of successful extensions: 544
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 360
Number of HSP's gapped (non-prelim): 147
length of query: 152
length of database: 18,247,518
effective HSP length: 93
effective length of query: 59
effective length of database: 14,725,980
effective search space: 868832820
effective search space used: 868832820
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.