Guide to the Human Genome
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Search of human proteins with 33386693

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|33386693 poly(A) binding protein interacting protein 1
isoform 2 [Homo sapiens]
         (400 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33386693 poly(A) binding protein interacting protein 1 isofor...   811   0.0  
gi|17511255 poly(A) binding protein interacting protein 1 isofor...   795   0.0  
gi|169212085 PREDICTED: similar to poly(A) binding protein inter...   780   0.0  
gi|239752553 PREDICTED: similar to poly(A) binding protein inter...   780   0.0  
gi|89041275 PREDICTED: similar to poly(A) binding protein intera...   780   0.0  
gi|34452730 poly(A) binding protein interacting protein 1 isofor...   745   0.0  
gi|38201621 eukaryotic translation initiation factor 4 gamma, 1 ...    81   2e-15
gi|38201627 eukaryotic translation initiation factor 4 gamma, 1 ...    81   2e-15
gi|38201625 eukaryotic translation initiation factor 4 gamma, 1 ...    81   2e-15
gi|38201623 eukaryotic translation initiation factor 4 gamma, 1 ...    81   2e-15
gi|38201619 eukaryotic translation initiation factor 4 gamma, 1 ...    81   2e-15
gi|215422401 hypothetical protein LOC9811 isoform 2 [Homo sapiens]     75   1e-13
gi|7662112 hypothetical protein LOC9811 isoform 1 [Homo sapiens]       75   1e-13
gi|10092601 eukaryotic translation initiation factor 4 gamma, 3 ...    68   2e-11
gi|110630018 eukaryotic translation initiation factor 4 gamma, 2...    43   6e-04
gi|4503539 eukaryotic translation initiation factor 4 gamma, 2 i...    43   6e-04
gi|118498362 kinectin 1 isoform b [Homo sapiens]                       35   0.16 
gi|118498356 kinectin 1 isoform a [Homo sapiens]                       35   0.16 
gi|118498368 kinectin 1 isoform c [Homo sapiens]                       35   0.16 
gi|33620775 kinectin 1 isoform a [Homo sapiens]                        35   0.16 
gi|55749769 CWC22 spliceosome-associated protein homolog [Homo s...    34   0.27 
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]                33   0.60 
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]                33   0.60 
gi|211059433 coiled-coil domain containing 79 [Homo sapiens]           33   0.60 
gi|153945846 inositol 1,4,5-triphosphate receptor, type 3 [Homo ...    32   0.78 
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]    32   1.0  
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]     32   1.0  
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]     32   1.0  
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]    32   1.0  
gi|23510352 MIF4G domain containing [Homo sapiens]                     32   1.0  

>gi|33386693 poly(A) binding protein interacting protein 1 isoform 2
           [Homo sapiens]
          Length = 400

 Score =  811 bits (2095), Expect = 0.0
 Identities = 400/400 (100%), Positives = 400/400 (100%)

Query: 1   MSDGFDRAPEQTRPLRAPPSSQDKIPQQNSESAMAKPQVVVAPVLMSKLSVNAPEFYPSG 60
           MSDGFDRAPEQTRPLRAPPSSQDKIPQQNSESAMAKPQVVVAPVLMSKLSVNAPEFYPSG
Sbjct: 1   MSDGFDRAPEQTRPLRAPPSSQDKIPQQNSESAMAKPQVVVAPVLMSKLSVNAPEFYPSG 60

Query: 61  YSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQE 120
           YSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQE
Sbjct: 61  YSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQE 120

Query: 121 LVELIYQQATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKG 180
           LVELIYQQATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKG
Sbjct: 121 LVELIYQQATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKG 180

Query: 181 DEVTRKRFHAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICA 240
           DEVTRKRFHAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICA
Sbjct: 181 DEVTRKRFHAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICA 240

Query: 241 VKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNWGR 300
           VKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNWGR
Sbjct: 241 VKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNWGR 300

Query: 301 VHATSTYREATPENDPNYFMNEPTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEEN 360
           VHATSTYREATPENDPNYFMNEPTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEEN
Sbjct: 301 VHATSTYREATPENDPNYFMNEPTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEEN 360

Query: 361 GTDLSGAGDPYLDDIDDEMDPEIEEAYEKFCLESERKRKQ 400
           GTDLSGAGDPYLDDIDDEMDPEIEEAYEKFCLESERKRKQ
Sbjct: 361 GTDLSGAGDPYLDDIDDEMDPEIEEAYEKFCLESERKRKQ 400


>gi|17511255 poly(A) binding protein interacting protein 1 isoform 1
           [Homo sapiens]
          Length = 479

 Score =  795 bits (2053), Expect = 0.0
 Identities = 392/392 (100%), Positives = 392/392 (100%)

Query: 9   PEQTRPLRAPPSSQDKIPQQNSESAMAKPQVVVAPVLMSKLSVNAPEFYPSGYSSSYTES 68
           PEQTRPLRAPPSSQDKIPQQNSESAMAKPQVVVAPVLMSKLSVNAPEFYPSGYSSSYTES
Sbjct: 88  PEQTRPLRAPPSSQDKIPQQNSESAMAKPQVVVAPVLMSKLSVNAPEFYPSGYSSSYTES 147

Query: 69  YEDGCEDYPTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQ 128
           YEDGCEDYPTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQ
Sbjct: 148 YEDGCEDYPTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQ 207

Query: 129 ATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRF 188
           ATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRF
Sbjct: 208 ATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRF 267

Query: 189 HAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTG 248
           HAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTG
Sbjct: 268 HAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTG 327

Query: 249 SVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYR 308
           SVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYR
Sbjct: 328 SVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYR 387

Query: 309 EATPENDPNYFMNEPTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEENGTDLSGAG 368
           EATPENDPNYFMNEPTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEENGTDLSGAG
Sbjct: 388 EATPENDPNYFMNEPTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEENGTDLSGAG 447

Query: 369 DPYLDDIDDEMDPEIEEAYEKFCLESERKRKQ 400
           DPYLDDIDDEMDPEIEEAYEKFCLESERKRKQ
Sbjct: 448 DPYLDDIDDEMDPEIEEAYEKFCLESERKRKQ 479


>gi|169212085 PREDICTED: similar to poly(A) binding protein
           interacting protein 1 [Homo sapiens]
          Length = 516

 Score =  780 bits (2015), Expect = 0.0
 Identities = 386/392 (98%), Positives = 386/392 (98%)

Query: 9   PEQTRPLRAPPSSQDKIPQQNSESAMAKPQVVVAPVLMSKLSVNAPEFYPSGYSSSYTES 68
           PEQTR LRAPPSSQDKIPQQNSESAMAKPQVVVAPVL SKLSVNAPEFYPSGYSSSYTES
Sbjct: 125 PEQTRSLRAPPSSQDKIPQQNSESAMAKPQVVVAPVLRSKLSVNAPEFYPSGYSSSYTES 184

Query: 69  YEDGCEDYPTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQ 128
           YE GCEDYPT SEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQEL ELIYQQ
Sbjct: 185 YEVGCEDYPTPSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELAELIYQQ 244

Query: 129 ATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRF 188
           ATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRF
Sbjct: 245 ATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRF 304

Query: 189 HAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTG 248
           HAFV FLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTG
Sbjct: 305 HAFVFFLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTG 364

Query: 249 SVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYR 308
           SVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYR
Sbjct: 365 SVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYR 424

Query: 309 EATPENDPNYFMNEPTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEENGTDLSGAG 368
           EATPENDPNYFMNEPTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEENGTDLSGAG
Sbjct: 425 EATPENDPNYFMNEPTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEENGTDLSGAG 484

Query: 369 DPYLDDIDDEMDPEIEEAYEKFCLESERKRKQ 400
           DPYLDDIDDEMDPEIEEAYEKFCLESERKRKQ
Sbjct: 485 DPYLDDIDDEMDPEIEEAYEKFCLESERKRKQ 516


>gi|239752553 PREDICTED: similar to poly(A) binding protein
           interacting protein 1 [Homo sapiens]
          Length = 457

 Score =  780 bits (2015), Expect = 0.0
 Identities = 386/392 (98%), Positives = 386/392 (98%)

Query: 9   PEQTRPLRAPPSSQDKIPQQNSESAMAKPQVVVAPVLMSKLSVNAPEFYPSGYSSSYTES 68
           PEQTR LRAPPSSQDKIPQQNSESAMAKPQVVVAPVL SKLSVNAPEFYPSGYSSSYTES
Sbjct: 66  PEQTRSLRAPPSSQDKIPQQNSESAMAKPQVVVAPVLRSKLSVNAPEFYPSGYSSSYTES 125

Query: 69  YEDGCEDYPTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQ 128
           YE GCEDYPT SEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQEL ELIYQQ
Sbjct: 126 YEVGCEDYPTPSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELAELIYQQ 185

Query: 129 ATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRF 188
           ATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRF
Sbjct: 186 ATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRF 245

Query: 189 HAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTG 248
           HAFV FLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTG
Sbjct: 246 HAFVFFLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTG 305

Query: 249 SVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYR 308
           SVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYR
Sbjct: 306 SVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYR 365

Query: 309 EATPENDPNYFMNEPTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEENGTDLSGAG 368
           EATPENDPNYFMNEPTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEENGTDLSGAG
Sbjct: 366 EATPENDPNYFMNEPTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEENGTDLSGAG 425

Query: 369 DPYLDDIDDEMDPEIEEAYEKFCLESERKRKQ 400
           DPYLDDIDDEMDPEIEEAYEKFCLESERKRKQ
Sbjct: 426 DPYLDDIDDEMDPEIEEAYEKFCLESERKRKQ 457


>gi|89041275 PREDICTED: similar to poly(A) binding protein
           interacting protein 1 [Homo sapiens]
          Length = 488

 Score =  780 bits (2015), Expect = 0.0
 Identities = 386/392 (98%), Positives = 386/392 (98%)

Query: 9   PEQTRPLRAPPSSQDKIPQQNSESAMAKPQVVVAPVLMSKLSVNAPEFYPSGYSSSYTES 68
           PEQTR LRAPPSSQDKIPQQNSESAMAKPQVVVAPVL SKLSVNAPEFYPSGYSSSYTES
Sbjct: 97  PEQTRSLRAPPSSQDKIPQQNSESAMAKPQVVVAPVLRSKLSVNAPEFYPSGYSSSYTES 156

Query: 69  YEDGCEDYPTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQ 128
           YE GCEDYPT SEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQEL ELIYQQ
Sbjct: 157 YEVGCEDYPTPSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELAELIYQQ 216

Query: 129 ATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRF 188
           ATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRF
Sbjct: 217 ATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRF 276

Query: 189 HAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTG 248
           HAFV FLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTG
Sbjct: 277 HAFVFFLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTG 336

Query: 249 SVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYR 308
           SVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYR
Sbjct: 337 SVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYR 396

Query: 309 EATPENDPNYFMNEPTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEENGTDLSGAG 368
           EATPENDPNYFMNEPTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEENGTDLSGAG
Sbjct: 397 EATPENDPNYFMNEPTFYTSDGVPFTAADPDYQEKYQELLEREDFFPDYEENGTDLSGAG 456

Query: 369 DPYLDDIDDEMDPEIEEAYEKFCLESERKRKQ 400
           DPYLDDIDDEMDPEIEEAYEKFCLESERKRKQ
Sbjct: 457 DPYLDDIDDEMDPEIEEAYEKFCLESERKRKQ 488


>gi|34452730 poly(A) binding protein interacting protein 1 isoform 3
           [Homo sapiens]
          Length = 367

 Score =  745 bits (1924), Expect = 0.0
 Identities = 367/367 (100%), Positives = 367/367 (100%)

Query: 34  MAKPQVVVAPVLMSKLSVNAPEFYPSGYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQ 93
           MAKPQVVVAPVLMSKLSVNAPEFYPSGYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQ
Sbjct: 1   MAKPQVVVAPVLMSKLSVNAPEFYPSGYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQ 60

Query: 94  PGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHHLTIS 153
           PGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHHLTIS
Sbjct: 61  PGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHHLTIS 120

Query: 154 PQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLEIKGTNGQVTR 213
           PQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLEIKGTNGQVTR
Sbjct: 121 PQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLEIKGTNGQVTR 180

Query: 214 ADILQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENV 273
           ADILQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENV
Sbjct: 181 ADILQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENV 240

Query: 274 VLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYREATPENDPNYFMNEPTFYTSDGVPF 333
           VLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYREATPENDPNYFMNEPTFYTSDGVPF
Sbjct: 241 VLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYREATPENDPNYFMNEPTFYTSDGVPF 300

Query: 334 TAADPDYQEKYQELLEREDFFPDYEENGTDLSGAGDPYLDDIDDEMDPEIEEAYEKFCLE 393
           TAADPDYQEKYQELLEREDFFPDYEENGTDLSGAGDPYLDDIDDEMDPEIEEAYEKFCLE
Sbjct: 301 TAADPDYQEKYQELLEREDFFPDYEENGTDLSGAGDPYLDDIDDEMDPEIEEAYEKFCLE 360

Query: 394 SERKRKQ 400
           SERKRKQ
Sbjct: 361 SERKRKQ 367


>gi|38201621 eukaryotic translation initiation factor 4 gamma, 1
           isoform 1 [Homo sapiens]
          Length = 1599

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 73/310 (23%), Positives = 141/310 (45%), Gaps = 57/310 (18%)

Query: 26  PQQNSESAMAKPQVVVAPVLMSK-LSVNAPEFYPSGYSSSYTESYEDGCEDYP-----TL 79
           P+++ +    +P+ ++A VLM++ + +N  E      S       + G ED        L
Sbjct: 701 PRRSQQGPRKEPRKIIATVLMTEDIKLNKAEKAWKPSSKRTAADKDRGEEDADGSKTQDL 760

Query: 80  SEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMG 139
              V+  LN LT  P  F+  ++Q  +     + T++ L+ +++LI+++A S PNFS   
Sbjct: 761 FRRVRSILNKLT--PQMFQQLMKQVTQL---AIDTEERLKGVIDLIFEKAISEPNFSVAY 815

Query: 140 ARLCNYLSHHLTISPQSG----NFRQLLLQRCRTEYE----------------------- 172
           A +C  L      + +      NFR+LLL RC+ E+E                       
Sbjct: 816 ANMCRCLMALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDKDDDEVFEKKQKEMDEAATAE 875

Query: 173 ----VKDQAAKGDEVTRKRFHAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNAL 228
               +K++  +  ++ R+R    + F+GEL+  L++           + +  + + +  L
Sbjct: 876 ERGRLKEELEEARDIARRRSLGNIKFIGELF-KLKM-----------LTEAIMHDCVVKL 923

Query: 229 FSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLL 288
             N  +++L C  +LL   G  L+    EK K  M++   ++E ++ +   S  ++ ML 
Sbjct: 924 LKNHDEESLECLCRLLTTIGKDLDF---EKAKPRMDQYFNQMEKIIKEKKTSSRIRFMLQ 980

Query: 289 KLVELRSSNW 298
            +++LR SNW
Sbjct: 981 DVLDLRGSNW 990


>gi|38201627 eukaryotic translation initiation factor 4 gamma, 1
           isoform 2 [Homo sapiens]
          Length = 1512

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 73/310 (23%), Positives = 141/310 (45%), Gaps = 57/310 (18%)

Query: 26  PQQNSESAMAKPQVVVAPVLMSK-LSVNAPEFYPSGYSSSYTESYEDGCEDYP-----TL 79
           P+++ +    +P+ ++A VLM++ + +N  E      S       + G ED        L
Sbjct: 614 PRRSQQGPRKEPRKIIATVLMTEDIKLNKAEKAWKPSSKRTAADKDRGEEDADGSKTQDL 673

Query: 80  SEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMG 139
              V+  LN LT  P  F+  ++Q  +     + T++ L+ +++LI+++A S PNFS   
Sbjct: 674 FRRVRSILNKLT--PQMFQQLMKQVTQL---AIDTEERLKGVIDLIFEKAISEPNFSVAY 728

Query: 140 ARLCNYLSHHLTISPQSG----NFRQLLLQRCRTEYE----------------------- 172
           A +C  L      + +      NFR+LLL RC+ E+E                       
Sbjct: 729 ANMCRCLMALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDKDDDEVFEKKQKEMDEAATAE 788

Query: 173 ----VKDQAAKGDEVTRKRFHAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNAL 228
               +K++  +  ++ R+R    + F+GEL+  L++           + +  + + +  L
Sbjct: 789 ERGRLKEELEEARDIARRRSLGNIKFIGELF-KLKM-----------LTEAIMHDCVVKL 836

Query: 229 FSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLL 288
             N  +++L C  +LL   G  L+    EK K  M++   ++E ++ +   S  ++ ML 
Sbjct: 837 LKNHDEESLECLCRLLTTIGKDLDF---EKAKPRMDQYFNQMEKIIKEKKTSSRIRFMLQ 893

Query: 289 KLVELRSSNW 298
            +++LR SNW
Sbjct: 894 DVLDLRGSNW 903


>gi|38201625 eukaryotic translation initiation factor 4 gamma, 1
           isoform 3 [Homo sapiens]
          Length = 1435

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 73/310 (23%), Positives = 141/310 (45%), Gaps = 57/310 (18%)

Query: 26  PQQNSESAMAKPQVVVAPVLMSK-LSVNAPEFYPSGYSSSYTESYEDGCEDYP-----TL 79
           P+++ +    +P+ ++A VLM++ + +N  E      S       + G ED        L
Sbjct: 537 PRRSQQGPRKEPRKIIATVLMTEDIKLNKAEKAWKPSSKRTAADKDRGEEDADGSKTQDL 596

Query: 80  SEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMG 139
              V+  LN LT  P  F+  ++Q  +     + T++ L+ +++LI+++A S PNFS   
Sbjct: 597 FRRVRSILNKLT--PQMFQQLMKQVTQL---AIDTEERLKGVIDLIFEKAISEPNFSVAY 651

Query: 140 ARLCNYLSHHLTISPQSG----NFRQLLLQRCRTEYE----------------------- 172
           A +C  L      + +      NFR+LLL RC+ E+E                       
Sbjct: 652 ANMCRCLMALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDKDDDEVFEKKQKEMDEAATAE 711

Query: 173 ----VKDQAAKGDEVTRKRFHAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNAL 228
               +K++  +  ++ R+R    + F+GEL+  L++           + +  + + +  L
Sbjct: 712 ERGRLKEELEEARDIARRRSLGNIKFIGELF-KLKM-----------LTEAIMHDCVVKL 759

Query: 229 FSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLL 288
             N  +++L C  +LL   G  L+    EK K  M++   ++E ++ +   S  ++ ML 
Sbjct: 760 LKNHDEESLECLCRLLTTIGKDLDF---EKAKPRMDQYFNQMEKIIKEKKTSSRIRFMLQ 816

Query: 289 KLVELRSSNW 298
            +++LR SNW
Sbjct: 817 DVLDLRGSNW 826


>gi|38201623 eukaryotic translation initiation factor 4 gamma, 1
           isoform 1 [Homo sapiens]
          Length = 1599

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 73/310 (23%), Positives = 141/310 (45%), Gaps = 57/310 (18%)

Query: 26  PQQNSESAMAKPQVVVAPVLMSK-LSVNAPEFYPSGYSSSYTESYEDGCEDYP-----TL 79
           P+++ +    +P+ ++A VLM++ + +N  E      S       + G ED        L
Sbjct: 701 PRRSQQGPRKEPRKIIATVLMTEDIKLNKAEKAWKPSSKRTAADKDRGEEDADGSKTQDL 760

Query: 80  SEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMG 139
              V+  LN LT  P  F+  ++Q  +     + T++ L+ +++LI+++A S PNFS   
Sbjct: 761 FRRVRSILNKLT--PQMFQQLMKQVTQL---AIDTEERLKGVIDLIFEKAISEPNFSVAY 815

Query: 140 ARLCNYLSHHLTISPQSG----NFRQLLLQRCRTEYE----------------------- 172
           A +C  L      + +      NFR+LLL RC+ E+E                       
Sbjct: 816 ANMCRCLMALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDKDDDEVFEKKQKEMDEAATAE 875

Query: 173 ----VKDQAAKGDEVTRKRFHAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNAL 228
               +K++  +  ++ R+R    + F+GEL+  L++           + +  + + +  L
Sbjct: 876 ERGRLKEELEEARDIARRRSLGNIKFIGELF-KLKM-----------LTEAIMHDCVVKL 923

Query: 229 FSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLL 288
             N  +++L C  +LL   G  L+    EK K  M++   ++E ++ +   S  ++ ML 
Sbjct: 924 LKNHDEESLECLCRLLTTIGKDLDF---EKAKPRMDQYFNQMEKIIKEKKTSSRIRFMLQ 980

Query: 289 KLVELRSSNW 298
            +++LR SNW
Sbjct: 981 DVLDLRGSNW 990


>gi|38201619 eukaryotic translation initiation factor 4 gamma, 1
           isoform 4 [Homo sapiens]
          Length = 1403

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 73/310 (23%), Positives = 141/310 (45%), Gaps = 57/310 (18%)

Query: 26  PQQNSESAMAKPQVVVAPVLMSK-LSVNAPEFYPSGYSSSYTESYEDGCEDYP-----TL 79
           P+++ +    +P+ ++A VLM++ + +N  E      S       + G ED        L
Sbjct: 505 PRRSQQGPRKEPRKIIATVLMTEDIKLNKAEKAWKPSSKRTAADKDRGEEDADGSKTQDL 564

Query: 80  SEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMG 139
              V+  LN LT  P  F+  ++Q  +     + T++ L+ +++LI+++A S PNFS   
Sbjct: 565 FRRVRSILNKLT--PQMFQQLMKQVTQL---AIDTEERLKGVIDLIFEKAISEPNFSVAY 619

Query: 140 ARLCNYLSHHLTISPQSG----NFRQLLLQRCRTEYE----------------------- 172
           A +C  L      + +      NFR+LLL RC+ E+E                       
Sbjct: 620 ANMCRCLMALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDKDDDEVFEKKQKEMDEAATAE 679

Query: 173 ----VKDQAAKGDEVTRKRFHAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNAL 228
               +K++  +  ++ R+R    + F+GEL+  L++           + +  + + +  L
Sbjct: 680 ERGRLKEELEEARDIARRRSLGNIKFIGELF-KLKM-----------LTEAIMHDCVVKL 727

Query: 229 FSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLL 288
             N  +++L C  +LL   G  L+    EK K  M++   ++E ++ +   S  ++ ML 
Sbjct: 728 LKNHDEESLECLCRLLTTIGKDLDF---EKAKPRMDQYFNQMEKIIKEKKTSSRIRFMLQ 784

Query: 289 KLVELRSSNW 298
            +++LR SNW
Sbjct: 785 DVLDLRGSNW 794


>gi|215422401 hypothetical protein LOC9811 isoform 2 [Homo sapiens]
          Length = 600

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 53/216 (24%), Positives = 111/216 (51%), Gaps = 16/216 (7%)

Query: 85  DFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCN 144
           + LN +       +T++  F E       +++ L E+V  IYQ+A S  +F++  A+LC+
Sbjct: 379 EILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIYQKAVSDRSFAFTAAKLCD 438

Query: 145 YLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLEI 204
            ++  +    +   FR LLL   + ++ V+++  + D    +R+  F+ FL E++  +  
Sbjct: 439 KMALFMV---EGTKFRSLLLNMLQKDFTVREELQQQDV---ERWLGFITFLCEVFGTM-- 490

Query: 205 KGTNGQVTRADI--LQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMD 262
           + + G+  R  +  +   LRELL +   +  +D ++C    L+ TG +LE+   E     
Sbjct: 491 RSSTGEPFRVLVCPIYTCLRELLQS--QDVKEDAVLCCSMELQSTGRLLEEQLPEM---- 544

Query: 263 MEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNW 298
           M E++    + +L  + S   + +LL+++EL +++W
Sbjct: 545 MTELLASARDKMLCPSESMLTRSLLLEVIELHANSW 580


>gi|7662112 hypothetical protein LOC9811 isoform 1 [Homo sapiens]
          Length = 598

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 53/216 (24%), Positives = 111/216 (51%), Gaps = 16/216 (7%)

Query: 85  DFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCN 144
           + LN +       +T++  F E       +++ L E+V  IYQ+A S  +F++  A+LC+
Sbjct: 377 EILNSMRNNSSDVDTKLTTFMEEAQNSTNSEEMLGEIVRTIYQKAVSDRSFAFTAAKLCD 436

Query: 145 YLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLEI 204
            ++  +    +   FR LLL   + ++ V+++  + D    +R+  F+ FL E++  +  
Sbjct: 437 KMALFMV---EGTKFRSLLLNMLQKDFTVREELQQQDV---ERWLGFITFLCEVFGTM-- 488

Query: 205 KGTNGQVTRADI--LQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMD 262
           + + G+  R  +  +   LRELL +   +  +D ++C    L+ TG +LE+   E     
Sbjct: 489 RSSTGEPFRVLVCPIYTCLRELLQS--QDVKEDAVLCCSMELQSTGRLLEEQLPEM---- 542

Query: 263 MEEIIQRIENVVLDANCSRDVKQMLLKLVELRSSNW 298
           M E++    + +L  + S   + +LL+++EL +++W
Sbjct: 543 MTELLASARDKMLCPSESMLTRSLLLEVIELHANSW 578


>gi|10092601 eukaryotic translation initiation factor 4 gamma, 3
           [Homo sapiens]
          Length = 1585

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 65/270 (24%), Positives = 122/270 (45%), Gaps = 55/270 (20%)

Query: 63  SSYTESYEDGCEDYPT--LSEYVQDFLNHLTEQPGSFETEIEQFAETLNGC-VTTDDALQ 119
           S   +S  D  E+  T  L   V+  LN LT Q         Q  + ++G  V T++ L+
Sbjct: 736 SQKRDSQADDPENIKTQELFRKVRSILNKLTPQM------FNQLMKQVSGLTVDTEERLK 789

Query: 120 ELVELIYQQATSIPNFSYMGARLCNYL-SHHLTISPQSGN---FRQLLLQRCRTEYE--- 172
            +++L++++A   P+FS   A +C  L +  + ++ + GN   FR+LLL RC+ E+E   
Sbjct: 790 GVIDLVFEKAIDEPSFSVAYANMCRCLVTLKVPMADKPGNTVNFRKLLLNRCQKEFEKDK 849

Query: 173 ------------------------VKDQAAKGDEVTRKRFHAFVLFLGELYLNLEIKGTN 208
                                   + D+  +  +  R+R    + F+GEL+  L++    
Sbjct: 850 ADDDVFEKKQKELEAASAPEERTRLHDELEEAKDKARRRSIGNIKFIGELF-KLKM---- 904

Query: 209 GQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQ 268
                  + +  + + +  L  N  +++L C  +LL   G  L+    EK K  M++   
Sbjct: 905 -------LTEAIMHDCVVKLLKNHDEESLECLCRLLTTIGKDLDF---EKAKPRMDQYFN 954

Query: 269 RIENVVLDANCSRDVKQMLLKLVELRSSNW 298
           ++E +V +   S  ++ ML  +++LR  NW
Sbjct: 955 QMEKIVKERKTSSRIRFMLQDVIDLRLCNW 984


>gi|110630018 eukaryotic translation initiation factor 4 gamma, 2
           isoform 2 [Homo sapiens]
          Length = 869

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 37/250 (14%)

Query: 74  EDYPTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIP 133
           E +  +   V+  LN LT  P  F+   +   E LN  V +   L+ ++ LI  +A   P
Sbjct: 72  ERHDAIFRKVRGILNKLT--PEKFD---KLCLELLNVGVESKLILKGVILLIVDKALEEP 126

Query: 134 NFSYMGARLCNYLSHHLTI-----------SPQSGNFRQLLLQRCRTEYEVK----DQAA 178
            +S + A+LC  L+                  QS  FR+LL+ + + E+E +    D   
Sbjct: 127 KYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQSTTFRRLLISKLQDEFENRTRNVDVYD 186

Query: 179 KGD-----EVTRKRFHAFVLFLGELYLNLEIKGTNGQVT--RADILQVGLRELLNA---L 228
           K +     E   +R  A +  LG    N++  G  G++      IL   ++ LL     +
Sbjct: 187 KRENPLLPEEEEQRAIAKIKMLG----NIKFIGELGKLDLIHESILHKCIKTLLEKKKRV 242

Query: 229 FSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLL 288
               M ++L C  ++++  G  L+    E+ K  M++   R+ +++L       ++ +L 
Sbjct: 243 QLKDMGEDLECLCQIMRTVGPRLDH---ERAKSLMDQYFARMCSLMLSKELPARIRFLLQ 299

Query: 289 KLVELRSSNW 298
             VELR  +W
Sbjct: 300 DTVELREHHW 309


>gi|4503539 eukaryotic translation initiation factor 4 gamma, 2
           isoform 1 [Homo sapiens]
          Length = 907

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 37/250 (14%)

Query: 74  EDYPTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIP 133
           E +  +   V+  LN LT  P  F+   +   E LN  V +   L+ ++ LI  +A   P
Sbjct: 72  ERHDAIFRKVRGILNKLT--PEKFD---KLCLELLNVGVESKLILKGVILLIVDKALEEP 126

Query: 134 NFSYMGARLCNYLSHHLTI-----------SPQSGNFRQLLLQRCRTEYEVK----DQAA 178
            +S + A+LC  L+                  QS  FR+LL+ + + E+E +    D   
Sbjct: 127 KYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQSTTFRRLLISKLQDEFENRTRNVDVYD 186

Query: 179 KGD-----EVTRKRFHAFVLFLGELYLNLEIKGTNGQVT--RADILQVGLRELLNA---L 228
           K +     E   +R  A +  LG    N++  G  G++      IL   ++ LL     +
Sbjct: 187 KRENPLLPEEEEQRAIAKIKMLG----NIKFIGELGKLDLIHESILHKCIKTLLEKKKRV 242

Query: 229 FSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLL 288
               M ++L C  ++++  G  L+    E+ K  M++   R+ +++L       ++ +L 
Sbjct: 243 QLKDMGEDLECLCQIMRTVGPRLDH---ERAKSLMDQYFARMCSLMLSKELPARIRFLLQ 299

Query: 289 KLVELRSSNW 298
             VELR  +W
Sbjct: 300 DTVELREHHW 309


>gi|118498362 kinectin 1 isoform b [Homo sapiens]
          Length = 1306

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 34/134 (25%), Positives = 54/134 (40%), Gaps = 14/134 (10%)

Query: 196 GELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAW 255
           G   L  E    N +V   D L      L   +FS   +D  +C V LLK    V++DA 
Sbjct: 267 GTKKLKTETDKENAEVKFKDFLL----SLKTMMFS---EDEALCVVDLLKEKSGVIQDAL 319

Query: 256 KEKGKMDMEEIIQRIEN-------VVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYR 308
           K+  K ++  +I +++        V  DA  ++D  + L + +         V      R
Sbjct: 320 KKSSKGELTTLIHQLQEKDKLLAAVKEDAAATKDRCKQLTQEMMTEKERSNVVITRMKDR 379

Query: 309 EATPENDPNYFMNE 322
             T E + N F N+
Sbjct: 380 IGTLEKEHNVFQNK 393


>gi|118498356 kinectin 1 isoform a [Homo sapiens]
          Length = 1357

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 34/134 (25%), Positives = 54/134 (40%), Gaps = 14/134 (10%)

Query: 196 GELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAW 255
           G   L  E    N +V   D L      L   +FS   +D  +C V LLK    V++DA 
Sbjct: 267 GTKKLKTETDKENAEVKFKDFLL----SLKTMMFS---EDEALCVVDLLKEKSGVIQDAL 319

Query: 256 KEKGKMDMEEIIQRIEN-------VVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYR 308
           K+  K ++  +I +++        V  DA  ++D  + L + +         V      R
Sbjct: 320 KKSSKGELTTLIHQLQEKDKLLAAVKEDAAATKDRCKQLTQEMMTEKERSNVVITRMKDR 379

Query: 309 EATPENDPNYFMNE 322
             T E + N F N+
Sbjct: 380 IGTLEKEHNVFQNK 393


>gi|118498368 kinectin 1 isoform c [Homo sapiens]
          Length = 1300

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 34/134 (25%), Positives = 54/134 (40%), Gaps = 14/134 (10%)

Query: 196 GELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAW 255
           G   L  E    N +V   D L      L   +FS   +D  +C V LLK    V++DA 
Sbjct: 267 GTKKLKTETDKENAEVKFKDFLL----SLKTMMFS---EDEALCVVDLLKEKSGVIQDAL 319

Query: 256 KEKGKMDMEEIIQRIEN-------VVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYR 308
           K+  K ++  +I +++        V  DA  ++D  + L + +         V      R
Sbjct: 320 KKSSKGELTTLIHQLQEKDKLLAAVKEDAAATKDRCKQLTQEMMTEKERSNVVITRMKDR 379

Query: 309 EATPENDPNYFMNE 322
             T E + N F N+
Sbjct: 380 IGTLEKEHNVFQNK 393


>gi|33620775 kinectin 1 isoform a [Homo sapiens]
          Length = 1357

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 34/134 (25%), Positives = 54/134 (40%), Gaps = 14/134 (10%)

Query: 196 GELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAW 255
           G   L  E    N +V   D L      L   +FS   +D  +C V LLK    V++DA 
Sbjct: 267 GTKKLKTETDKENAEVKFKDFLL----SLKTMMFS---EDEALCVVDLLKEKSGVIQDAL 319

Query: 256 KEKGKMDMEEIIQRIEN-------VVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYR 308
           K+  K ++  +I +++        V  DA  ++D  + L + +         V      R
Sbjct: 320 KKSSKGELTTLIHQLQEKDKLLAAVKEDAAATKDRCKQLTQEMMTEKERSNVVITRMKDR 379

Query: 309 EATPENDPNYFMNE 322
             T E + N F N+
Sbjct: 380 IGTLEKEHNVFQNK 393


>gi|55749769 CWC22 spliceosome-associated protein homolog [Homo
           sapiens]
          Length = 908

 Score = 33.9 bits (76), Expect = 0.27
 Identities = 34/178 (19%), Positives = 75/178 (42%), Gaps = 11/178 (6%)

Query: 223 ELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRD 282
           E+L  L   P DD++  A+  LK  G  L     +     +  I +R+ N++ ++   + 
Sbjct: 276 EMLTLLLERPTDDSVEVAIGFLKECGLKL----TQVSPRGINAIFERLRNILHESEIDKR 331

Query: 283 VKQMLLKLVELRSSNWGRVHATSTYREATPENDPNYFM--NEPTFYTSDGVPFTAADPDY 340
           V+ M+  +  +R   +          +   E+D    M   E  +   D +     DP++
Sbjct: 332 VQYMIEVMFAVRKDGFKDHPIILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNF 391

Query: 341 ---QEKYQELLEREDFFPDYEENGTDLSGAGDPYLDDIDDEMDPEIEEAYEKFCLESE 395
              +EKY+ +  +++   + + +      AG    D+ ++E + E +E  +K  +  +
Sbjct: 392 MENEEKYKAI--KKEILDEGDTDSNTDQDAGSSEEDEEEEEEEGEEDEEGQKVTIHDK 447


>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
          Length = 1240

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 4/80 (5%)

Query: 102 EQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQ 161
           EQ+ E L   ++   AL EL E I Q+   + ++    A+    LS   T S     FR 
Sbjct: 863 EQYTERLQASISAFRALDELFEAIEQKQRELADYLCEDAQ---QLSLEDTFSTMKA-FRD 918

Query: 162 LLLQRCRTEYEVKDQAAKGD 181
           L L+  +   + K+QAAK +
Sbjct: 919 LFLRALKENKDRKEQAAKAE 938


>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
          Length = 1249

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 4/80 (5%)

Query: 102 EQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQ 161
           EQ+ E L   ++   AL EL E I Q+   + ++    A+    LS   T S     FR 
Sbjct: 863 EQYTERLQASISAFRALDELFEAIEQKQRELADYLCEDAQ---QLSLEDTFSTMKA-FRD 918

Query: 162 LLLQRCRTEYEVKDQAAKGD 181
           L L+  +   + K+QAAK +
Sbjct: 919 LFLRALKENKDRKEQAAKAE 938


>gi|211059433 coiled-coil domain containing 79 [Homo sapiens]
          Length = 727

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 9/116 (7%)

Query: 232 PMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENVVLDAN---CSRDVKQMLL 288
           P D+N    +K + +  + LE+ W++      +EI+ RIE +  + N     R+  Q  +
Sbjct: 382 PFDENETQQLKDISVKENNLEEHWRKA-----KEILHRIEQLEREGNEEEIQRENYQDNI 436

Query: 289 KLVELRSSN-WGRVHATSTYREATPENDPNYFMNEPTFYTSDGVPFTAADPDYQEK 343
             + +   N W  +HA    R +  E++      +   Y S GV   A   D Q K
Sbjct: 437 SSMNISIQNTWKHLHADRIGRGSKAEDEDKSHSRQLQSYKSHGVMSKACTNDDQMK 492


>gi|153945846 inositol 1,4,5-triphosphate receptor, type 3 [Homo
           sapiens]
          Length = 2671

 Score = 32.3 bits (72), Expect = 0.78
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 37  PQVVVAPVLMSKLSVNAPEFYP-SGYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQPG 95
           PQ +V PV  ++L    P       Y S+   S +D    +    E+V+D+LN++  +  
Sbjct: 790 PQELVTPVKFARLWTEIPTAITIKDYDSNLNASRDDKKNKFANTMEFVEDYLNNVVSEAV 849

Query: 96  SFETE 100
            F  E
Sbjct: 850 PFANE 854


>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
          Length = 1126

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 40/187 (21%), Positives = 73/187 (39%), Gaps = 26/187 (13%)

Query: 9   PEQTRPLRAPP---------SSQDKIPQQNSESAMAKPQVVVAPVLMSKLSVNAPEFYPS 59
           P+ ++P   PP         SSQ   P + SE+   +P  + A  +  +     PE  P 
Sbjct: 191 PQHSQPPPQPPAVTPEPVALSSQTSEPVE-SEAPPREP--MEAEEVEERAPAQNPELTPG 247

Query: 60  GYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTD---- 115
              +  T + E    ++P+ +EYV + L  L       +  ++++ E L    TTD    
Sbjct: 248 PAPAGPTPAPETNAPNHPSPAEYV-EVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNN 306

Query: 116 ----DALQELVELIYQQATSIPN-FSYMGARLCNYL----SHHLTISPQSGNFRQLLLQR 166
               +  Q L+ L+ +    + N F  +    CN       H   + P S     ++LQ+
Sbjct: 307 HEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQ 366

Query: 167 CRTEYEV 173
                ++
Sbjct: 367 AAIPIQI 373


>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
          Length = 1126

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 40/187 (21%), Positives = 73/187 (39%), Gaps = 26/187 (13%)

Query: 9   PEQTRPLRAPP---------SSQDKIPQQNSESAMAKPQVVVAPVLMSKLSVNAPEFYPS 59
           P+ ++P   PP         SSQ   P + SE+   +P  + A  +  +     PE  P 
Sbjct: 191 PQHSQPPPQPPAVTPEPVALSSQTSEPVE-SEAPPREP--MEAEEVEERAPAQNPELTPG 247

Query: 60  GYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTD---- 115
              +  T + E    ++P+ +EYV + L  L       +  ++++ E L    TTD    
Sbjct: 248 PAPAGPTPAPETNAPNHPSPAEYV-EVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNN 306

Query: 116 ----DALQELVELIYQQATSIPN-FSYMGARLCNYL----SHHLTISPQSGNFRQLLLQR 166
               +  Q L+ L+ +    + N F  +    CN       H   + P S     ++LQ+
Sbjct: 307 HEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQ 366

Query: 167 CRTEYEV 173
                ++
Sbjct: 367 AAIPIQI 373


>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
          Length = 1126

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 40/187 (21%), Positives = 73/187 (39%), Gaps = 26/187 (13%)

Query: 9   PEQTRPLRAPP---------SSQDKIPQQNSESAMAKPQVVVAPVLMSKLSVNAPEFYPS 59
           P+ ++P   PP         SSQ   P + SE+   +P  + A  +  +     PE  P 
Sbjct: 191 PQHSQPPPQPPAVTPEPVALSSQTSEPVE-SEAPPREP--MEAEEVEERAPAQNPELTPG 247

Query: 60  GYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTD---- 115
              +  T + E    ++P+ +EYV + L  L       +  ++++ E L    TTD    
Sbjct: 248 PAPAGPTPAPETNAPNHPSPAEYV-EVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNN 306

Query: 116 ----DALQELVELIYQQATSIPN-FSYMGARLCNYL----SHHLTISPQSGNFRQLLLQR 166
               +  Q L+ L+ +    + N F  +    CN       H   + P S     ++LQ+
Sbjct: 307 HEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQ 366

Query: 167 CRTEYEV 173
                ++
Sbjct: 367 AAIPIQI 373


>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
          Length = 1132

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 40/187 (21%), Positives = 73/187 (39%), Gaps = 26/187 (13%)

Query: 9   PEQTRPLRAPP---------SSQDKIPQQNSESAMAKPQVVVAPVLMSKLSVNAPEFYPS 59
           P+ ++P   PP         SSQ   P + SE+   +P  + A  +  +     PE  P 
Sbjct: 197 PQHSQPPPQPPAVTPEPVALSSQTSEPVE-SEAPPREP--MEAEEVEERAPAQNPELTPG 253

Query: 60  GYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTD---- 115
              +  T + E    ++P+ +EYV + L  L       +  ++++ E L    TTD    
Sbjct: 254 PAPAGPTPAPETNAPNHPSPAEYV-EVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNN 312

Query: 116 ----DALQELVELIYQQATSIPN-FSYMGARLCNYL----SHHLTISPQSGNFRQLLLQR 166
               +  Q L+ L+ +    + N F  +    CN       H   + P S     ++LQ+
Sbjct: 313 HEGREEDQRLINLVGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQ 372

Query: 167 CRTEYEV 173
                ++
Sbjct: 373 AAIPIQI 379


>gi|23510352 MIF4G domain containing [Homo sapiens]
          Length = 256

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 39/196 (19%), Positives = 76/196 (38%), Gaps = 20/196 (10%)

Query: 118 LQELVELIYQQATSIPNFSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEVKDQA 177
           L+++  +I   +     FS    R+C  +    +       FR+ LL R + EY+ ++Q 
Sbjct: 68  LEKVANVIVDHSLQDCVFSKEAGRMCYAIIQAESKQAGQSVFRRGLLNRLQQEYQAREQL 127

Query: 178 AKGDEVTRKRFHAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPMDDNL 237
                 + + +  +V F+  ++  L +            +   +  + + LF     D+L
Sbjct: 128 RAR---SLQGWVCYVTFICNIFDYLRVNNMP--------MMALVNPVYDCLFRLAQPDSL 176

Query: 238 I------CAVKLLKLTGSVLEDAWKEKGKMDMEEIIQRIENVVLDANCSRDVKQMLLKLV 291
                  C V  L   G  LE   K  G+   E  +   +  +L    S   + +LL+++
Sbjct: 177 SKEEEVDCLVLQLHRVGEQLE---KMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEII 233

Query: 292 ELRSSNWGRVHATSTY 307
           E R++ W    A   Y
Sbjct: 234 EFRAAGWKTTPAAHKY 249


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.133    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,887,886
Number of Sequences: 37866
Number of extensions: 724518
Number of successful extensions: 1845
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1794
Number of HSP's gapped (non-prelim): 43
length of query: 400
length of database: 18,247,518
effective HSP length: 104
effective length of query: 296
effective length of database: 14,309,454
effective search space: 4235598384
effective search space used: 4235598384
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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