Search of human proteins with 33147089

Search of human proteins with 33147089

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|33147089 apolipoprotein B mRNA editing enzyme, catalytic
polypeptide-like 3H [Homo sapiens]
         (183 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33147089 apolipoprotein B mRNA editing enzyme, catalytic poly...   394   e-110
gi|22907044 apolipoprotein B mRNA editing enzyme, catalytic poly...   112   2e-25
gi|10190700 activation-induced cytidine deaminase [Homo sapiens]      109   2e-24
gi|13399304 apolipoprotein B mRNA editing enzyme, catalytic poly...   107   7e-24
gi|22907039 apolipoprotein B mRNA editing enzyme, catalytic poly...   107   7e-24
gi|187608816 apolipoprotein B mRNA editing enzyme, catalytic pol...   106   1e-23
gi|22907025 apolipoprotein B mRNA editing enzyme, catalytic poly...    97   6e-21
gi|21955158 phorbolin 1 [Homo sapiens]                                 97   8e-21
gi|61743957 apolipoprotein B mRNA editing enzyme [Homo sapiens]        71   6e-13
gi|5802978 apolipoprotein B mRNA editing enzyme, catalytic polyp...    66   1e-11
gi|4503835 frizzled 9 [Homo sapiens]                                   31   0.68 
gi|91982767 semaphorin 5B isoform 1 [Homo sapiens]                     29   2.6  
gi|4507565 tumor necrosis factor receptor superfamily, member 11...    28   3.4  
gi|134142826 pericentriolar material 1 [Homo sapiens]                  28   4.4  
gi|42476083 interferon, alpha 8 [Homo sapiens]                         28   5.7  
gi|32880208 diaphanous homolog 3 isoform b [Homo sapiens]              27   7.5  
gi|110225351 diaphanous homolog 3 isoform a [Homo sapiens]             27   7.5  
gi|10880985 interferon, alpha 17 [Homo sapiens]                        27   9.8  
gi|169791013 interferon, alpha 21 [Homo sapiens]                       27   9.8  

>gi|33147089 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 3H [Homo sapiens]
          Length = 183

 Score =  394 bits (1012), Expect = e-110
 Identities = 183/183 (100%), Positives = 183/183 (100%)

Query: 1   MALLTAETFRLQFNNKRRLRRPYYPRKALLCYQLTPQNGSTPTRGYFENKKKCHAEICFI 60
           MALLTAETFRLQFNNKRRLRRPYYPRKALLCYQLTPQNGSTPTRGYFENKKKCHAEICFI
Sbjct: 1   MALLTAETFRLQFNNKRRLRRPYYPRKALLCYQLTPQNGSTPTRGYFENKKKCHAEICFI 60

Query: 61  NEIKSMGLDETQCYQVTCYLTWSPCSSCAWELVDFIKAHDHLNLGIFASRLYYHWCKPQQ 120
           NEIKSMGLDETQCYQVTCYLTWSPCSSCAWELVDFIKAHDHLNLGIFASRLYYHWCKPQQ
Sbjct: 61  NEIKSMGLDETQCYQVTCYLTWSPCSSCAWELVDFIKAHDHLNLGIFASRLYYHWCKPQQ 120

Query: 121 KGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPYKMLEELDKNSRAIKRRLERI 180
           KGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPYKMLEELDKNSRAIKRRLERI
Sbjct: 121 KGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPYKMLEELDKNSRAIKRRLERI 180

Query: 181 KQS 183
           KQS
Sbjct: 181 KQS 183


>gi|22907044 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 3F isoform a [Homo sapiens]
          Length = 373

 Score =  112 bits (279), Expect = 2e-25
 Identities = 63/171 (36%), Positives = 89/171 (52%), Gaps = 11/171 (6%)

Query: 1   MALLTAETFRLQFNNKRRLRRPYYPRKALLCYQLTPQNGSTPT---RGYFENK----KKC 53
           M  +    F   F N   LR+ Y   ++ LC+ +      +P    RG F N+      C
Sbjct: 192 MEAMYPHIFYFHFKN---LRKAYGRNESWLCFTMEVVKHHSPVSWKRGVFRNQVDPETHC 248

Query: 54  HAEICFINEIKSMGLDETQCYQVTCYLTWSPCSSCAWELVDFIKAHDHLNLGIFASRLYY 113
           HAE CF++      L     Y+VT Y +WSPC  CA E+ +F+  H ++NL IF +RLYY
Sbjct: 249 HAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLYY 308

Query: 114 HWCKPQQKGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPYKMLE 164
            W    Q+GLR L      VE+MG+ +F  CWENFV ++    F P+K L+
Sbjct: 309 FWDTDYQEGLRSLSQEGASVEIMGYKDFKYCWENFVYNDDE-PFKPWKGLK 358



 Score = 99.0 bits (245), Expect = 2e-21
 Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 13/180 (7%)

Query: 7   ETFRLQFNNKRRLRRPYYPRKALLCYQLTPQNGSTPT------RGYFENKKKCHAEICFI 60
           +TF   F N+  L R        LCY++  +  S P       RG   ++ + HAE+CF+
Sbjct: 15  DTFSYNFYNRPILSRR---NTVWLCYEVKTKGPSRPRLDAKIFRGQVYSQPEHHAEMCFL 71

Query: 61  NEIKSMGLDETQCYQVTCYLTWSPCSSCAWELVDFIKAHDHLNLGIFASRLYYHWCKPQQ 120
           +      L   +C+Q+T +++W+PC  C  +L +F+  H ++ L I A+RLYY+W +  +
Sbjct: 72  SWFCGNQLPAYKCFQITWFVSWTPCPDCVAKLAEFLAEHPNVTLTISAARLYYYWERDYR 131

Query: 121 KGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPYKMLEELDKNSRAIKRRLERI 180
           + L  L  +   V++M   EFA CWENFV  E      P+    + D N   + R L+ I
Sbjct: 132 RALCRLSQAGARVKIMDDEEFAYCWENFVYSEG----QPFMPWYKFDDNYAFLHRTLKEI 187


>gi|10190700 activation-induced cytidine deaminase [Homo sapiens]
          Length = 198

 Score =  109 bits (272), Expect = 2e-24
 Identities = 63/184 (34%), Positives = 98/184 (53%), Gaps = 15/184 (8%)

Query: 3   LLTAETFRLQFNNKRRLRRPYYPRKALLCYQLTPQNGSTPTR---GYFENKKKCHAEICF 59
           L+    F  QF N R  +     R+  LCY +  ++ +T      GY  NK  CH E+ F
Sbjct: 5   LMNRRKFLYQFKNVRWAKGR---RETYLCYVVKRRDSATSFSLDFGYLRNKNGCHVELLF 61

Query: 60  INEIKSMGLDETQCYQVTCYLTWSPCSSCAWELVDFIKAHDHLNLGIFASRLYYHWC--- 116
           +  I    LD  +CY+VT + +WSPC  CA  + DF++ + +L+L IF +RLY+  C   
Sbjct: 62  LRYISDWDLDPGRCYRVTWFTSWSPCYDCARHVADFLRGNPNLSLRIFTARLYF--CEDR 119

Query: 117 KPQQKGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPYKMLEELDKNSRAIKRR 176
           K + +GLR L  + V + +M F ++  CW  FV++ +      +K  E L +NS  + R+
Sbjct: 120 KAEPEGLRRLHRAGVQIAIMTFKDYFYCWNTFVENHE----RTFKAWEGLHENSVRLSRQ 175

Query: 177 LERI 180
           L RI
Sbjct: 176 LRRI 179


>gi|13399304 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 3G [Homo sapiens]
          Length = 384

 Score =  107 bits (266), Expect = 7e-24
 Identities = 64/189 (33%), Positives = 102/189 (53%), Gaps = 21/189 (11%)

Query: 8   TFRLQFNNKRRLRRPYYPRKALLCYQLTPQNGST-----PTRGYFENK--------KKCH 54
           TF   FNN+  +R  +   +  LCY++   +  T       RG+  N+        +  H
Sbjct: 201 TFTFNFNNEPWVRGRH---ETYLCYEVERMHNDTWVLLNQRRGFLCNQAPHKHGFLEGRH 257

Query: 55  AEICFINEIKSMGLDETQCYQVTCYLTWSPCSSCAWELVDFIKAHDHLNLGIFASRLYYH 114
           AE+CF++ I    LD  Q Y+VTC+ +WSPC SCA E+  FI  + H++L IF +R+Y  
Sbjct: 258 AELCFLDVIPFWKLDLDQDYRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIFTARIYDD 317

Query: 115 WCKPQQKGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPYKMLEELDKNSRAIK 174
             + Q+ GLR L  +   + +M + EF  CW+ FVDH+      P++  + LD++S+ + 
Sbjct: 318 QGRCQE-GLRTLAEAGAKISIMTYSEFKHCWDTFVDHQG----CPFQPWDGLDEHSQDLS 372

Query: 175 RRLERIKQS 183
            RL  I Q+
Sbjct: 373 GRLRAILQN 381



 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 15/168 (8%)

Query: 7   ETFRLQFNNKRRLRRPYYPRKALLCYQLTPQNGSTPT------RGYFENKKKCHAEICFI 60
           +TF   F N+  L R        LCY++  +  S P       RG   ++ K H E+ F 
Sbjct: 15  DTFSYNFYNRPILSRR---NTVWLCYEVKTKGPSRPPLDAKIFRGQVYSELKYHPEMRFF 71

Query: 61  NEI-KSMGLDETQCYQVTCYLTWSPCSSCAWELVDFIKAHDHLNLGIFASRLYYHWCKPQ 119
           +   K   L   Q Y+VT Y++WSPC+ C  ++  F+     + L IF +RLYY W    
Sbjct: 72  HWFSKWRKLHRDQEYEVTWYISWSPCTKCTRDMATFLAEDPKVTLTIFVARLYYFWDPDY 131

Query: 120 QKGLRLLC----GSQVPVEVMGFPEFADCWENFVDHEKPLSFNPYKML 163
           Q+ LR LC    G +  +++M + EF  CW  FV  ++ L F P+  L
Sbjct: 132 QEALRSLCQKRDGPRATMKIMNYDEFQHCWSKFVYSQREL-FEPWNNL 178


>gi|22907039 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 3C [Homo sapiens]
          Length = 190

 Score =  107 bits (266), Expect = 7e-24
 Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 4/139 (2%)

Query: 44  RGYFENKKKCHAEICFINEIKSMGLDETQCYQVTCYLTWSPCSSCAWELVDFIKAHDHLN 103
           R   +++  CHAE CF++      L     YQVT Y +WSPC  CA E+ +F+  H ++N
Sbjct: 56  RNQVDSETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVN 115

Query: 104 LGIFASRLYYHWCKPQQKGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPYKML 163
           L IF +RLYY      Q+GLR L    V VE+M + +F  CWENFV ++      P+K  
Sbjct: 116 LTIFTARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDN----EPFKPW 171

Query: 164 EELDKNSRAIKRRLERIKQ 182
           + L  N R +KRRL    Q
Sbjct: 172 KGLKTNFRLLKRRLRESLQ 190


>gi|187608816 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 3D [Homo sapiens]
          Length = 386

 Score =  106 bits (264), Expect = 1e-23
 Identities = 56/143 (39%), Positives = 77/143 (53%), Gaps = 8/143 (5%)

Query: 44  RGYFENK----KKCHAEICFINEIKSMGLDETQCYQVTCYLTWSPCSSCAWELVDFIKAH 99
           RG F N+      CHAE CF++      L     Y+VT Y +WSPC  CA E+ +F+  H
Sbjct: 248 RGVFRNQVDPETHCHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARH 307

Query: 100 DHLNLGIFASRLYYHWCKPQQKGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNP 159
            ++NL IF +RL Y W    Q+GL  L      V++MG+ +F  CW+NFV  +      P
Sbjct: 308 SNVNLTIFTARLCYFWDTDYQEGLCSLSQEGASVKIMGYKDFVSCWKNFVYSDD----EP 363

Query: 160 YKMLEELDKNSRAIKRRLERIKQ 182
           +K  + L  N R +KRRL  I Q
Sbjct: 364 FKPWKGLQTNFRLLKRRLREILQ 386



 Score = 77.4 bits (189), Expect = 6e-15
 Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 8/134 (5%)

Query: 47  FENKKKCHAEICFINEIKSMGLDETQCYQVTCYLTWSPCSSCAWELVDFIKAHDHLNLGI 106
           FEN    HAE+CF++      L   + +Q+T +++W+PC  C  ++  F+  H ++ L I
Sbjct: 75  FEN----HAEMCFLSWFCGNRLPANRRFQITWFVSWNPCLPCVVKVTKFLAEHPNVTLTI 130

Query: 107 FASRLYYHWCKPQQKGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPYKMLEEL 166
            A+RLYY+  +  +  L  L  +   V++M + +FA CWENFV +E      P+    + 
Sbjct: 131 SAARLYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYCWENFVCNEG----QPFMPWYKF 186

Query: 167 DKNSRAIKRRLERI 180
           D N  ++ R L+ I
Sbjct: 187 DDNYASLHRTLKEI 200


>gi|22907025 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 3B [Homo sapiens]
          Length = 382

 Score = 97.4 bits (241), Expect = 6e-21
 Identities = 59/187 (31%), Positives = 94/187 (50%), Gaps = 14/187 (7%)

Query: 1   MALLTAETFRLQFNNKRRLRRPYYPRKALLCYQLTPQNGSTPT-------RGYFENKKKC 53
           M  +  +TF   F N+  L    Y     LCY++  + G +         RG    K + 
Sbjct: 9   MERMYRDTFYDNFENEPILYGRSY---TWLCYEVKIKRGRSNLLWDTGVFRGQVYFKPQY 65

Query: 54  HAEICFINEIKSMGLDETQCYQVTCYLTWSPCSSCAWELVDFIKAHDHLNLGIFASRLYY 113
           HAE+CF++      L   +C+Q+T +++W+PC  C  +L +F+  H ++ L I A+RLYY
Sbjct: 66  HAEMCFLSWFCGNQLPAYKCFQITWFVSWTPCPDCVAKLAEFLSEHPNVTLTISAARLYY 125

Query: 114 HWCKPQQKGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPYKMLEELDKNSRAI 173
           +W +  ++ L  L  +   V +M + EFA CWENFV +E       YK     D+N   +
Sbjct: 126 YWERDYRRALCRLSQAGARVTIMDYEEFAYCWENFVYNEGQQFMPWYK----FDENYAFL 181

Query: 174 KRRLERI 180
            R L+ I
Sbjct: 182 HRTLKEI 188



 Score = 91.7 bits (226), Expect = 3e-19
 Identities = 64/196 (32%), Positives = 105/196 (53%), Gaps = 23/196 (11%)

Query: 3   LLTAETFRLQFNNKRRLRRPYYPRKALLCYQLTPQNGST-----PTRGYFENKKK---C- 53
           L+  +TF   FNN   + R    R+  LCY++   +  T        G+  N+ K   C 
Sbjct: 192 LMDPDTFTFNFNNDPLVLRR---RQTYLCYEVERLDNGTWVLMDQHMGFLCNEAKNLLCG 248

Query: 54  ----HAEICFINEIKSMGLDETQCYQVTCYLTWSPCSS--CAWELVDFIKAHDHLNLGIF 107
               HAE+ F++ + S+ LD  Q Y+VT +++WSPC S  CA E+  F++ + H+ L IF
Sbjct: 249 FYGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIF 308

Query: 108 ASRLYYHWCKPQQKGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPYKMLEELD 167
           A+R+ Y +    ++ L++L  +   V +M + EF  CW+ FV + +   F P+  LEE  
Sbjct: 309 AARI-YDYDPLYKEALQMLRDAGAQVSIMTYDEFEYCWDTFV-YRQGCPFQPWDGLEE-- 364

Query: 168 KNSRAIKRRLERIKQS 183
            +S+A+  RL  I Q+
Sbjct: 365 -HSQALSGRLRAILQN 379


>gi|21955158 phorbolin 1 [Homo sapiens]
          Length = 199

 Score = 97.1 bits (240), Expect = 8e-21
 Identities = 63/196 (32%), Positives = 104/196 (53%), Gaps = 26/196 (13%)

Query: 3   LLTAETFRLQFNNKRRLRRPYYPRKALLCYQLTPQNGSTPT-----RGYFENKKK---C- 53
           L+    F   FNN     + Y      LCY++   +  T       RG+  N+ K   C 
Sbjct: 12  LMDPHIFTSNFNNGIGRHKTY------LCYEVERLDNGTSVKMDQHRGFLHNQAKNLLCG 65

Query: 54  ----HAEICFINEIKSMGLDETQCYQVTCYLTWSPCSS--CAWELVDFIKAHDHLNLGIF 107
               HAE+ F++ + S+ LD  Q Y+VT +++WSPC S  CA E+  F++ + H+ L IF
Sbjct: 66  FYGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIF 125

Query: 108 ASRLYYHWCKPQQKGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPYKMLEELD 167
           A+R+ Y +    ++ L++L  +   V +M + EF  CW+ FVDH+      P++  + LD
Sbjct: 126 AARI-YDYDPLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQG----CPFQPWDGLD 180

Query: 168 KNSRAIKRRLERIKQS 183
           ++S+A+  RL  I Q+
Sbjct: 181 EHSQALSGRLRAILQN 196


>gi|61743957 apolipoprotein B mRNA editing enzyme [Homo sapiens]
          Length = 236

 Score = 70.9 bits (172), Expect = 6e-13
 Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 1/99 (1%)

Query: 54  HAEICFINEIKS-MGLDETQCYQVTCYLTWSPCSSCAWELVDFIKAHDHLNLGIFASRLY 112
           H E+ FI +  S      +    +T +L+WSPC  C+  + +F+  H  + L I+ +RL+
Sbjct: 61  HVEVNFIKKFTSERDFHPSMSCSITWFLSWSPCWECSQAIREFLSRHPGVTLVIYVARLF 120

Query: 113 YHWCKPQQKGLRLLCGSQVPVEVMGFPEFADCWENFVDH 151
           +H  +  ++GLR L  S V +++M   E+  CW NFV++
Sbjct: 121 WHMDQQNRQGLRDLVNSGVTIQIMRASEYYHCWRNFVNY 159


>gi|5802978 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 2 [Homo sapiens]
          Length = 224

 Score = 66.2 bits (160), Expect = 1e-11
 Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 12/169 (7%)

Query: 4   LTAETFRLQFNNKRRLRRPYYPRKALLCYQLTPQNGS---TPTRGYFENKKKC-HAEICF 59
           L A  F+ QF N   +       K  LCY +  Q        +RGY E++    HAE  F
Sbjct: 47  LPANFFKFQFRN---VEYSSGRNKTFLCYVVEAQGKGGQVQASRGYLEDEHAAAHAEEAF 103

Query: 60  INEIKSMGLDETQCYQVTCYLTWSPCSSCAWELVDFIKAHDHLNLGIFASRLYYHWCKPQ 119
            N I     D    Y VT Y++ SPC++CA  ++  +    +L L I   RL+  W +P+
Sbjct: 104 FNTILP-AFDPALRYNVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRLFM-WEEPE 161

Query: 120 -QKGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLS--FNPYKMLEE 165
            Q  L+ L  +   + +M   +F   W+NFV+ E+  S  F P++ ++E
Sbjct: 162 IQAALKKLKEAGCKLRIMKPQDFEYVWQNFVEQEEGESKAFQPWEDIQE 210


>gi|4503835 frizzled 9 [Homo sapiens]
          Length = 591

 Score = 30.8 bits (68), Expect = 0.68
 Identities = 35/161 (21%), Positives = 62/161 (38%), Gaps = 20/161 (12%)

Query: 26  RKALLCYQLTPQNGSTPTRGYFENKKKCHAEICFINEI---KSMGLDETQCYQVTCYLTW 82
           R ALL +QL    G+    G F+ ++   A  C   EI   + +G + T+   +  + + 
Sbjct: 7   RGALLLWQLLAAGGAALEIGRFDPERGRGAAPCQAVEIPMCRGIGYNLTRMPNLLGHTSQ 66

Query: 83  SPCSSCAWELVDFIKAHDHLNLGIFASRLYYHWC-----------KPQQKGLRLLCGSQV 131
              ++   E    ++   H +L  F   LY   C           +P  +  RL C   +
Sbjct: 67  GEAAAELAEFAPLVQYGCHSHLRFFLCSLYAPMCTDQVSTPIPACRPMCEQARLRCAPIM 126

Query: 132 PVEVMGFPEFADCWENFVDHEKPLSFNPYKMLEELDKNSRA 172
                G+P+  DC         P   +P+ +  E  +N+ A
Sbjct: 127 EQFNFGWPDSLDC------ARLPTRNDPHALCMEAPENATA 161


>gi|91982767 semaphorin 5B isoform 1 [Homo sapiens]
          Length = 1151

 Score = 28.9 bits (63), Expect = 2.6
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 12/57 (21%)

Query: 31  CYQLTPQNGSTPTRGYFENKKKCHAEICFINEIKSMGLDETQCYQVTCYLTWSPCSS 87
           C    P+NG  P  G     + C+ + C +    S            C+ +WSPCS+
Sbjct: 880 CTNPEPRNGGLPCVGDAAEYQDCNPQACPVRGAWS------------CWTSWSPCSA 924


>gi|4507565 tumor necrosis factor receptor superfamily, member 11a
           precursor [Homo sapiens]
          Length = 616

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 18/81 (22%), Positives = 28/81 (34%)

Query: 7   ETFRLQFNNKRRLRRPYYPRKALLCYQLTPQNGSTPTRGYFENKKKCHAEICFINEIKSM 66
           ++FR        + RP  P   LL         + P     E  +      CF     ++
Sbjct: 338 DSFRQMPTEDEYMDRPSQPTDQLLFLTEPGSKSTPPFSEPLEVGENDSLSQCFTGTQSTV 397

Query: 67  GLDETQCYQVTCYLTWSPCSS 87
           G +   C +  C   W+P SS
Sbjct: 398 GSESCNCTEPLCRTDWTPMSS 418


>gi|134142826 pericentriolar material 1 [Homo sapiens]
          Length = 2024

 Score = 28.1 bits (61), Expect = 4.4
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 3/40 (7%)

Query: 143  DCWENFVDHEKPLSFNP---YKMLEELDKNSRAIKRRLER 179
            DC E+ +     + FN    +K++++LD NS  +K+R +R
Sbjct: 1667 DCGEDLLVEISEVLFNELAFFKLMQDLDNNSITVKQRCKR 1706


>gi|42476083 interferon, alpha 8 [Homo sapiens]
          Length = 189

 Score = 27.7 bits (60), Expect = 5.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)

Query: 75  QVTCYLTWSPCSSCAWELV 93
           ++T YLT    SSCAWE+V
Sbjct: 149 RITLYLTEKKYSSCAWEVV 167


>gi|32880208 diaphanous homolog 3 isoform b [Homo sapiens]
          Length = 849

 Score = 27.3 bits (59), Expect = 7.5
 Identities = 13/36 (36%), Positives = 23/36 (63%)

Query: 147 NFVDHEKPLSFNPYKMLEELDKNSRAIKRRLERIKQ 182
           NFVD  +PL       +E L+KN R + R+L+++++
Sbjct: 636 NFVDDLEPLDKASKVSVETLEKNLRQMGRQLQQLEK 671


>gi|110225351 diaphanous homolog 3 isoform a [Homo sapiens]
          Length = 1193

 Score = 27.3 bits (59), Expect = 7.5
 Identities = 13/36 (36%), Positives = 23/36 (63%)

Query: 147 NFVDHEKPLSFNPYKMLEELDKNSRAIKRRLERIKQ 182
           NFVD  +PL       +E L+KN R + R+L+++++
Sbjct: 899 NFVDDLEPLDKASKVSVETLEKNLRQMGRQLQQLEK 934


>gi|10880985 interferon, alpha 17 [Homo sapiens]
          Length = 189

 Score = 26.9 bits (58), Expect = 9.8
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 16/51 (31%)

Query: 56  EICFINEIKSMGLDETQCY-------------QVTCYLTWSPCSSCAWELV 93
           E C I E+   G++ET                ++T YLT    S CAWE+V
Sbjct: 120 EACVIQEV---GMEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVV 167


>gi|169791013 interferon, alpha 21 [Homo sapiens]
          Length = 189

 Score = 26.9 bits (58), Expect = 9.8
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 16/58 (27%)

Query: 49  NKKKCHAEICFINEIKSMGLDETQCYQV-------------TCYLTWSPCSSCAWELV 93
           N++    E C I E+   G++ET    V             T YLT    S CAWE+V
Sbjct: 113 NQQLNDLEACVIQEV---GVEETPLMNVDSILAVKKYFQRITLYLTEKKYSPCAWEVV 167


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.138    0.455 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,532,048
Number of Sequences: 37866
Number of extensions: 337820
Number of successful extensions: 924
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 894
Number of HSP's gapped (non-prelim): 24
length of query: 183
length of database: 18,247,518
effective HSP length: 96
effective length of query: 87
effective length of database: 14,612,382
effective search space: 1271277234
effective search space used: 1271277234
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.