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Search of human proteins with 32967586
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32967586 protein phosphatase 2, regulatory subunit B'',
alpha isoform 2 [Homo sapiens]
(529 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32967586 protein phosphatase 2, regulatory subunit B'', alpha... 1090 0.0
gi|19923229 protein phosphatase 2, regulatory subunit B'', alpha... 1004 0.0
gi|33695078 protein phosphatase 2, regulatory subunit B'', beta ... 601 e-172
gi|41349491 protein phosphatase 2, regulatory subunit B'', beta ... 191 2e-48
gi|239758164 PREDICTED: similar to protein phosphatase 2A 48 kDa... 151 2e-36
gi|31542242 serine/threonine-protein phosphatase 2A regulatory s... 123 4e-28
gi|22027634 diacylglycerol kinase, beta isoform 2 [Homo sapiens] 40 0.005
gi|22027632 diacylglycerol kinase, beta isoform 1 [Homo sapiens] 40 0.005
gi|4507127 small nuclear ribonucleoprotein polypeptide C [Homo s... 36 0.099
gi|169636435 caudal type homeobox 2 [Homo sapiens] 35 0.17
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 35 0.17
gi|122056619 LIM domain binding 3 isoform 4 [Homo sapiens] 35 0.22
gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens] 35 0.22
gi|169167975 PREDICTED: hypothetical protein LOC100129566 [Homo ... 35 0.22
gi|169167690 PREDICTED: hypothetical protein LOC100129566 [Homo ... 35 0.22
gi|209977097 tripartite motif-containing 66 [Homo sapiens] 34 0.29
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 34 0.38
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 34 0.38
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 34 0.38
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 34 0.38
gi|169168212 PREDICTED: hypothetical protein LOC100129566 [Homo ... 34 0.38
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 34 0.38
gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo ... 33 0.49
gi|59710093 G-protein coupled receptor 112 [Homo sapiens] 33 0.49
gi|146134388 YLP motif containing 1 [Homo sapiens] 33 0.49
gi|124256482 diacylglycerol kinase gamma isoform 3 [Homo sapiens] 33 0.64
gi|124256474 diacylglycerol kinase gamma isoform 2 [Homo sapiens] 33 0.64
gi|124256476 diacylglycerol kinase gamma isoform 1 [Homo sapiens] 33 0.64
gi|19923345 RNA binding motif protein 12 [Homo sapiens] 33 0.64
gi|23510462 RNA binding motif protein 12 [Homo sapiens] 33 0.64
>gi|32967586 protein phosphatase 2, regulatory subunit B'', alpha
isoform 2 [Homo sapiens]
Length = 529
Score = 1090 bits (2820), Expect = 0.0
Identities = 529/529 (100%), Positives = 529/529 (100%)
Query: 1 MMIKETSLRRDPDLRGELAFLARGCDFVLPSRFKKRLKSFQQTQIQNKPEKKPGTPLPPP 60
MMIKETSLRRDPDLRGELAFLARGCDFVLPSRFKKRLKSFQQTQIQNKPEKKPGTPLPPP
Sbjct: 1 MMIKETSLRRDPDLRGELAFLARGCDFVLPSRFKKRLKSFQQTQIQNKPEKKPGTPLPPP 60
Query: 61 ATSPSSPRPLSPVPHVNNVVNAPLSINIPRFYFPEGLPDTCSNHEQTLSRIETAFMDIEE 120
ATSPSSPRPLSPVPHVNNVVNAPLSINIPRFYFPEGLPDTCSNHEQTLSRIETAFMDIEE
Sbjct: 61 ATSPSSPRPLSPVPHVNNVVNAPLSINIPRFYFPEGLPDTCSNHEQTLSRIETAFMDIEE 120
Query: 121 QKADIYEMGKIAKVCGCPLYWKAPMFRAAGGEKTGFVTAQSFIAMWRKLLNNHHDDASKF 180
QKADIYEMGKIAKVCGCPLYWKAPMFRAAGGEKTGFVTAQSFIAMWRKLLNNHHDDASKF
Sbjct: 121 QKADIYEMGKIAKVCGCPLYWKAPMFRAAGGEKTGFVTAQSFIAMWRKLLNNHHDDASKF 180
Query: 181 ICLLAKPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNRSW 240
ICLLAKPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNRSW
Sbjct: 181 ICLLAKPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNRSW 240
Query: 241 SGKITSTEIRKSNFLQTLALLEEEEDINQITDYFSYEHFYVIYCKFWELDTDHDLYISQA 300
SGKITSTEIRKSNFLQTLALLEEEEDINQITDYFSYEHFYVIYCKFWELDTDHDLYISQA
Sbjct: 241 SGKITSTEIRKSNFLQTLALLEEEEDINQITDYFSYEHFYVIYCKFWELDTDHDLYISQA 300
Query: 301 DLSRYNDQASSSRIIERIFSGAVTRGKTIQKEGRMSYADFVWFLISEEDKRNPTSIEYWF 360
DLSRYNDQASSSRIIERIFSGAVTRGKTIQKEGRMSYADFVWFLISEEDKRNPTSIEYWF
Sbjct: 301 DLSRYNDQASSSRIIERIFSGAVTRGKTIQKEGRMSYADFVWFLISEEDKRNPTSIEYWF 360
Query: 361 RCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRD 420
RCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRD
Sbjct: 361 RCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRD 420
Query: 421 LKRCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPSDWDRFAAEEYETLVAEE 480
LKRCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPSDWDRFAAEEYETLVAEE
Sbjct: 421 LKRCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPSDWDRFAAEEYETLVAEE 480
Query: 481 SAQAQFQEGFEDYETDEPASPSEFGNKSNKILSASLPEKCGKLQSVDEE 529
SAQAQFQEGFEDYETDEPASPSEFGNKSNKILSASLPEKCGKLQSVDEE
Sbjct: 481 SAQAQFQEGFEDYETDEPASPSEFGNKSNKILSASLPEKCGKLQSVDEE 529
>gi|19923229 protein phosphatase 2, regulatory subunit B'', alpha
isoform 1 [Homo sapiens]
Length = 1150
Score = 1004 bits (2597), Expect = 0.0
Identities = 485/486 (99%), Positives = 486/486 (100%)
Query: 44 QIQNKPEKKPGTPLPPPATSPSSPRPLSPVPHVNNVVNAPLSINIPRFYFPEGLPDTCSN 103
+IQNKPEKKPGTPLPPPATSPSSPRPLSPVPHVNNVVNAPLSINIPRFYFPEGLPDTCSN
Sbjct: 665 KIQNKPEKKPGTPLPPPATSPSSPRPLSPVPHVNNVVNAPLSINIPRFYFPEGLPDTCSN 724
Query: 104 HEQTLSRIETAFMDIEEQKADIYEMGKIAKVCGCPLYWKAPMFRAAGGEKTGFVTAQSFI 163
HEQTLSRIETAFMDIEEQKADIYEMGKIAKVCGCPLYWKAPMFRAAGGEKTGFVTAQSFI
Sbjct: 725 HEQTLSRIETAFMDIEEQKADIYEMGKIAKVCGCPLYWKAPMFRAAGGEKTGFVTAQSFI 784
Query: 164 AMWRKLLNNHHDDASKFICLLAKPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSR 223
AMWRKLLNNHHDDASKFICLLAKPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSR
Sbjct: 785 AMWRKLLNNHHDDASKFICLLAKPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSR 844
Query: 224 YITTVIQRIFYTVNRSWSGKITSTEIRKSNFLQTLALLEEEEDINQITDYFSYEHFYVIY 283
YITTVIQRIFYTVNRSWSGKITSTEIRKSNFLQTLALLEEEEDINQITDYFSYEHFYVIY
Sbjct: 845 YITTVIQRIFYTVNRSWSGKITSTEIRKSNFLQTLALLEEEEDINQITDYFSYEHFYVIY 904
Query: 284 CKFWELDTDHDLYISQADLSRYNDQASSSRIIERIFSGAVTRGKTIQKEGRMSYADFVWF 343
CKFWELDTDHDLYISQADLSRYNDQASSSRIIERIFSGAVTRGKTIQKEGRMSYADFVWF
Sbjct: 905 CKFWELDTDHDLYISQADLSRYNDQASSSRIIERIFSGAVTRGKTIQKEGRMSYADFVWF 964
Query: 344 LISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQ 403
LISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQ
Sbjct: 965 LISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQ 1024
Query: 404 MLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPS 463
MLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPS
Sbjct: 1025 MLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPS 1084
Query: 464 DWDRFAAEEYETLVAEESAQAQFQEGFEDYETDEPASPSEFGNKSNKILSASLPEKCGKL 523
DWDRFAAEEYETLVAEESAQAQFQEGFEDYETDEPASPSEFGNKSNKILSASLPEKCGKL
Sbjct: 1085 DWDRFAAEEYETLVAEESAQAQFQEGFEDYETDEPASPSEFGNKSNKILSASLPEKCGKL 1144
Query: 524 QSVDEE 529
QSVDEE
Sbjct: 1145 QSVDEE 1150
>gi|33695078 protein phosphatase 2, regulatory subunit B'', beta
isoform 1 [Homo sapiens]
Length = 575
Score = 601 bits (1550), Expect = e-172
Identities = 285/458 (62%), Positives = 356/458 (77%), Gaps = 22/458 (4%)
Query: 53 PGTPLPPPAT---SPSSPRPLSPVPHVNNVVNA------------PL----SINIPRFYF 93
PGTP P PA + SSPR PHV + PL S +IP FYF
Sbjct: 74 PGTPGPGPALPLGAASSPRN---APHVRGTRRSAGTRVVQTRKEEPLPPATSQSIPTFYF 130
Query: 94 PEGLPDTCSNHEQTLSRIETAFMDIEEQKADIYEMGKIAKVCGCPLYWKAPMFRAAGGEK 153
P G P N + +S+IE+ F ++A + +MG +AK CGCPLYWK P+F AGGE+
Sbjct: 131 PRGRPQDSVNVDAVISKIESTFARFPHERATMDDMGLVAKACGCPLYWKGPLFYGAGGER 190
Query: 154 TGFVTAQSFIAMWRKLLNNHHDDASKFICLLAKPNCSSLEQEDFIPLLQDVVDTHPGLTF 213
TG V+ F+AMWRK+L N HDDA+KF+ LL P C+ L QEDF+P LQDVV+THPGL+F
Sbjct: 191 TGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQDVVNTHPGLSF 250
Query: 214 LKDAPEFHSRYITTVIQRIFYTVNRSWSGKITSTEIRKSNFLQTLALLEEEEDINQITDY 273
LK+A EFHSRYITTVIQRIFY VNRSWSG+IT E+R+S+FLQ +ALLEEE DINQ+T++
Sbjct: 251 LKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEEEADINQLTEF 310
Query: 274 FSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQASSSRIIERIFSGAVTRGKTIQKEG 333
FSYEHFYVIYCKFWELDTDHDL I DL+R+ND A S+++I+RIFSGAVTRG+ +QKEG
Sbjct: 311 FSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGRKVQKEG 370
Query: 334 RMSYADFVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAMGIE 393
++SYADFVWFLISEEDK+ PTSIEYWFRCMD+DGDG LSM+ELEYFYEEQC R+++M IE
Sbjct: 371 KISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIE 430
Query: 394 PLPFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDHEQRDPFAVQK 453
LPF D LCQMLDLVKP +GKITL+DLKRC++A++F+DTFFN+EKYLDHEQ++ ++ +
Sbjct: 431 ALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQKEQISLLR 490
Query: 454 DVENDGPEPSDWDRFAAEEYETLVAEESAQAQFQEGFE 491
D ++ GPE SDW+++AAEEY+ LVAEE+A +++GFE
Sbjct: 491 DGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFE 528
>gi|41349491 protein phosphatase 2, regulatory subunit B'', beta
isoform 2 [Homo sapiens]
Length = 176
Score = 191 bits (484), Expect = 2e-48
Identities = 83/129 (64%), Positives = 111/129 (86%)
Query: 363 MDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLK 422
MD+DGDG LSM+ELEYFYEEQC R+++M IE LPF D LCQMLDLVKP +GKITL+DLK
Sbjct: 1 MDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLK 60
Query: 423 RCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPSDWDRFAAEEYETLVAEESA 482
RC++A++F+DTFFN+EKYLDHEQ++ ++ +D ++ GPE SDW+++AAEEY+ LVAEE+A
Sbjct: 61 RCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETA 120
Query: 483 QAQFQEGFE 491
+++GFE
Sbjct: 121 GEPWEDGFE 129
>gi|239758164 PREDICTED: similar to protein phosphatase 2A 48 kDa
regulatory subunit [Homo sapiens]
Length = 290
Score = 151 bits (381), Expect = 2e-36
Identities = 67/106 (63%), Positives = 82/106 (77%)
Query: 123 ADIYEMGKIAKVCGCPLYWKAPMFRAAGGEKTGFVTAQSFIAMWRKLLNNHHDDASKFIC 182
AD + + + CGCPLYWK P+F AGGE+TG V+ F+AMWRK+L N HDDA+KF+
Sbjct: 75 ADCPLLPSLPQACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVH 134
Query: 183 LLAKPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSRYITTV 228
LL P C+ L QEDF+P LQDVV+THPGL+FLK+A EFHSRYITTV
Sbjct: 135 LLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTV 180
>gi|31542242 serine/threonine-protein phosphatase 2A regulatory
subunit B'' gamma subunit [Homo sapiens]
Length = 453
Score = 123 bits (309), Expect = 4e-28
Identities = 75/277 (27%), Positives = 144/277 (51%), Gaps = 15/277 (5%)
Query: 192 LEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNRSWSGKITSTEIRK 251
L + D + +++ T P L L+ + F+S Y+ T +++ F+ ++ +GKI +I
Sbjct: 188 LRESDLENYILELIPTLPQLDGLEKS--FYSFYVCTAVRKFFFFLDPLRTGKIKIQDILA 245
Query: 252 SNFLQTLALLEEEE--DINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQA 309
+FL L L +EE +Q T++FS +Y ++ LD DH+ +S+ +LSRY
Sbjct: 246 CSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTAT 305
Query: 310 SSSRIIERIFSGAVTRGKTIQKEGRMSYADFVWFLISEEDKRNPTSIEYWFRCMDVDGDG 369
++ ++R+F +T +G M Y ++ F+++ E+++ P +++Y F+ +D++ G
Sbjct: 306 MTNVFLDRVFQECLTY------DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKG 359
Query: 370 VLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHI 429
L+++ L YF+ E M+ G +P+ F D+ ++ D+VKP KI+L+DL
Sbjct: 360 YLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDT 419
Query: 430 FYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPSDWD 466
+L + +E R+ V ND +D D
Sbjct: 420 VTTILIDLNGFWTYENREAL-----VANDSENSADLD 451
>gi|22027634 diacylglycerol kinase, beta isoform 2 [Homo sapiens]
Length = 773
Score = 40.0 bits (92), Expect = 0.005
Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 19/173 (10%)
Query: 263 EEEDINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQASSSRIIE------ 316
+++ +NQ D+ E F + F E + D + + +S N SS +++
Sbjct: 50 KQDILNQTIDF---EGFKLFMKTFLEAELPDD-FTAHLFMSFSNKFPHSSPMVKSKPALL 105
Query: 317 ----RIFSGAVTRGKTIQKEGRMS-----YADFVWFLISEEDKRNPTSIEYWFRCMDVDG 367
R+ GA+T +T S D V +L E R +E+ FR D DG
Sbjct: 106 SGGLRMNKGAITPPRTTSPANTCSPEVIHLKDIVCYLSLLERGRPEDKLEFMFRLYDTDG 165
Query: 368 DGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRD 420
+G L ELE + E + + + +L +M++ + DG ++L +
Sbjct: 166 NGFLDSSELENIISQMMHVAEYLEWDVTELNPILHEMMEEIDYDHDGTVSLEE 218
>gi|22027632 diacylglycerol kinase, beta isoform 1 [Homo sapiens]
Length = 804
Score = 40.0 bits (92), Expect = 0.005
Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 19/173 (10%)
Query: 263 EEEDINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQASSSRIIE------ 316
+++ +NQ D+ E F + F E + D + + +S N SS +++
Sbjct: 50 KQDILNQTIDF---EGFKLFMKTFLEAELPDD-FTAHLFMSFSNKFPHSSPMVKSKPALL 105
Query: 317 ----RIFSGAVTRGKTIQKEGRMS-----YADFVWFLISEEDKRNPTSIEYWFRCMDVDG 367
R+ GA+T +T S D V +L E R +E+ FR D DG
Sbjct: 106 SGGLRMNKGAITPPRTTSPANTCSPEVIHLKDIVCYLSLLERGRPEDKLEFMFRLYDTDG 165
Query: 368 DGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRD 420
+G L ELE + E + + + +L +M++ + DG ++L +
Sbjct: 166 NGFLDSSELENIISQMMHVAEYLEWDVTELNPILHEMMEEIDYDHDGTVSLEE 218
>gi|4507127 small nuclear ribonucleoprotein polypeptide C [Homo
sapiens]
Length = 159
Score = 35.8 bits (81), Expect = 0.099
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 31 SRFKKRLKSFQQTQIQNKPEKKP---GTPLPPPATSPSSPRP-LSPVPHVNNVVNAPLSI 86
S K +FQQ +I P P G +PPP + P PRP + P PH+ P+
Sbjct: 48 SLIDKTTAAFQQGKIPPTPFSAPPPAGAMIPPPPSLPGPPRPGMMPAPHMGGPPMMPMMG 107
Query: 87 NIPRFYFPEG 96
P P G
Sbjct: 108 PPPPGMMPVG 117
>gi|169636435 caudal type homeobox 2 [Homo sapiens]
Length = 313
Score = 35.0 bits (79), Expect = 0.17
Identities = 18/40 (45%), Positives = 20/40 (50%)
Query: 34 KKRLKSFQQTQIQNKPEKKPGTPLPPPATSPSSPRPLSPV 73
KK+L+ QQ Q P P P P P S P PLSPV
Sbjct: 246 KKKLQQQQQQQPPQPPPPPPQPPQPQPGPLRSVPEPLSPV 285
Score = 32.3 bits (72), Expect = 1.1
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 7 SLRRDPDLRGELAFLARGCDFVLPSRFKKRLKSFQQTQIQNKPEKKPGTPLPPPATSPSS 66
++RR +L L R +R K K ++ Q + ++ P P PPP
Sbjct: 212 TIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQQQQQPPQPPPPPPQPPQPQ 271
Query: 67 PRPLSPVPHVNNVVNAPLSINIP 89
P PL VP + V++ L ++P
Sbjct: 272 PGPLRSVPEPLSPVSS-LQASVP 293
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 35.0 bits (79), Expect = 0.17
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 41 QQTQIQNKPEKKPGTPLPPPATSPSSPRPLSPV--PHVNNVVNAPLSI 86
+QT+++ +P+K G P P TSP+SP+P V P N + P I
Sbjct: 1112 KQTKVEGEPQKGGGLPPAPSPTSPASPQPPPAVAAPSEKNSIPIPTII 1159
>gi|122056619 LIM domain binding 3 isoform 4 [Homo sapiens]
Length = 283
Score = 34.7 bits (78), Expect = 0.22
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 51 KKPGTPLPPPATSPSSPRPLSPVPHVNNVVNAPLSINIPRFYFPEGLPDTC-SNHE 105
+K P+P T+P PL +PH VVN+P + + + P L D+ S H+
Sbjct: 81 QKSKRPIPISTTAPPVQTPLPVIPHQKVVVNSPANADYQERFNPSALKDSALSTHK 136
>gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens]
Length = 617
Score = 34.7 bits (78), Expect = 0.22
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 51 KKPGTPLPPPATSPSSPRPLSPVPHVNNVVNAPLSINIPRFYFPEGLPDTC-SNHE 105
+K P+P T+P PL +PH VVN+P + + + P L D+ S H+
Sbjct: 81 QKSKRPIPISTTAPPVQTPLPVIPHQKVVVNSPANADYQERFNPSALKDSALSTHK 136
>gi|169167975 PREDICTED: hypothetical protein LOC100129566 [Homo
sapiens]
Length = 155
Score = 34.7 bits (78), Expect = 0.22
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 31 SRFKKRLKSFQQTQIQNKPEKKP---GTPLPPPATSPSSPRP-LSPVPHVNNVVNAPLSI 86
S K +FQQ +I P P G +PPP + P P P + P PH+ P+
Sbjct: 48 SLIDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMG 107
Query: 87 NIPRFYFPEG 96
P P G
Sbjct: 108 PPPPGMMPGG 117
>gi|169167690 PREDICTED: hypothetical protein LOC100129566 [Homo
sapiens]
Length = 155
Score = 34.7 bits (78), Expect = 0.22
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 31 SRFKKRLKSFQQTQIQNKPEKKP---GTPLPPPATSPSSPRP-LSPVPHVNNVVNAPLSI 86
S K +FQQ +I P P G +PPP + P P P + P PH+ P+
Sbjct: 48 SLIDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMG 107
Query: 87 NIPRFYFPEG 96
P P G
Sbjct: 108 PPPPGMMPGG 117
>gi|209977097 tripartite motif-containing 66 [Homo sapiens]
Length = 1216
Score = 34.3 bits (77), Expect = 0.29
Identities = 26/97 (26%), Positives = 35/97 (36%), Gaps = 20/97 (20%)
Query: 34 KKRLKSFQQTQIQNKPEKKPGTPLPPPATSPSSPRPLSPVPHVNNVVNAPLSINIPRFYF 93
K +L FQQ Q P P P PPP P +P P+P ++ +
Sbjct: 443 KLKLSHFQQQPQQQLPPPPPPLPHPPPPLPPPPQQPHPPLPPSQHLAS------------ 490
Query: 94 PEGLPDTCSNHEQTLSRIETAFMDIEEQKADIYEMGK 130
S HE + MDI K ++ EM K
Sbjct: 491 --------SQHESPPGPACSQNMDIMHHKFELEEMQK 519
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 33.9 bits (76), Expect = 0.38
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 42 QTQIQNKPEKKPGTPLPPPATSPSSPRPLSPVPH 75
Q ++Q P P PLPPP PSSP ++ + H
Sbjct: 417 QGEVQGLPPPPPPPPLPPPGIRPSSPVTVTALAH 450
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 33.9 bits (76), Expect = 0.38
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 42 QTQIQNKPEKKPGTPLPPPATSPSSPRPLSPVPH 75
Q ++Q P P PLPPP PSSP ++ + H
Sbjct: 417 QGEVQGLPPPPPPPPLPPPGIRPSSPVTVTALAH 450
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 33.9 bits (76), Expect = 0.38
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 42 QTQIQNKPEKKPGTPLPPPATSPSSPRPLSPVPH 75
Q ++Q P P PLPPP PSSP ++ + H
Sbjct: 417 QGEVQGLPPPPPPPPLPPPGIRPSSPVTVTALAH 450
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 33.9 bits (76), Expect = 0.38
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 42 QTQIQNKPEKKPGTPLPPPATSPSSPRPLSPVPH 75
Q ++Q P P PLPPP PSSP ++ + H
Sbjct: 417 QGEVQGLPPPPPPPPLPPPGIRPSSPVTVTALAH 450
>gi|169168212 PREDICTED: hypothetical protein LOC100129566 [Homo
sapiens]
Length = 155
Score = 33.9 bits (76), Expect = 0.38
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 31 SRFKKRLKSFQQTQIQNKPEKKP---GTPLPPPATSPSSPRP-LSPVPHVNNVVNAPLSI 86
S K +FQQ +I P P G +PPP + P P P + P PH+ P+
Sbjct: 48 SLIDKTTAAFQQGKIPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPPMMPMMG 107
Query: 87 NIPRFYFPEG 96
P P G
Sbjct: 108 PPPPGMMPGG 117
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 33.9 bits (76), Expect = 0.38
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 43 TQIQNKPEKKPGTPLPPPATSPSSPRPLSPVPHVNNVVNAPLSINIPRF 91
T +Q P P P PPP P P P P P V P+S+++P F
Sbjct: 1988 TPLQAPPPTPPPPPPPPP---PPPPPPPPPPPSAPPQVQLPVSLDLPLF 2033
Score = 29.6 bits (65), Expect = 7.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 47 NKPEKKPGTPLPPPATSPSSPRPLSPVP-HVNNVVNAPLSINIP 89
+ PE P P PPP P+ P+P S P + N V+ PL P
Sbjct: 1953 SSPETPPPPP-PPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPP 1995
>gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo
sapiens]
Length = 600
Score = 33.5 bits (75), Expect = 0.49
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 16/76 (21%)
Query: 16 GELAFLARGCDFV------------LPSRFKKRLKSFQQTQIQNKPEKKPGT----PLPP 59
GE+A ARG D + + K+R Q+ + +P++ PG LPP
Sbjct: 51 GEIATGARGADTARCRWIQSCPLQAVAAAQKERALEISQSSGEPQPQRSPGPVSAQALPP 110
Query: 60 PATSPSSPRPLSPVPH 75
P +P+ P P +P H
Sbjct: 111 PQRTPTLPPPATPHQH 126
>gi|59710093 G-protein coupled receptor 112 [Homo sapiens]
Length = 3080
Score = 33.5 bits (75), Expect = 0.49
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 6/95 (6%)
Query: 204 VVDTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNR---SWSGKITSTEIRKSNFLQTLAL 260
V + P T L+ E R +V F + + K +TE+R+S L L
Sbjct: 858 VAEVSPFSTMLEVTDESAQRVTASVTVSSFPDIEKLSTPLDNKTATTEVRESWLLTKLVK 917
Query: 261 LEEEEDINQITDYFSYEHFYVIYCKFWELDTDHDL 295
N++T+ F++ H YV + W +T +
Sbjct: 918 TTPRSSYNEMTEMFNFNHTYVAH---WTSETSEGI 949
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 33.5 bits (75), Expect = 0.49
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 53 PGTPLPPPATSPSSPRPLSPVPHVNNVVNAPLSINIPRFYFPEGLP 98
P LPPP+ S ++P P+ P+P +++ P IP P+G+P
Sbjct: 601 PPPVLPPPSLSSTAPPPVMPLPPLSSATPPP---GIPPPGVPQGIP 643
>gi|124256482 diacylglycerol kinase gamma isoform 3 [Homo sapiens]
Length = 752
Score = 33.1 bits (74), Expect = 0.64
Identities = 20/82 (24%), Positives = 38/82 (46%)
Query: 339 DFVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFH 398
D V +L E R +E+ FR D D +G+L E++ + + + +P
Sbjct: 163 DVVCYLSLLETGRPQDKLEFMFRLYDSDENGLLDQAEMDCIVNQMLHIAQYLEWDPTELR 222
Query: 399 DLLCQMLDLVKPAVDGKITLRD 420
+L +ML + DG ++L++
Sbjct: 223 PILKEMLQGMDYDRDGFVSLQE 244
>gi|124256474 diacylglycerol kinase gamma isoform 2 [Homo sapiens]
Length = 766
Score = 33.1 bits (74), Expect = 0.64
Identities = 20/82 (24%), Positives = 38/82 (46%)
Query: 339 DFVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFH 398
D V +L E R +E+ FR D D +G+L E++ + + + +P
Sbjct: 163 DVVCYLSLLETGRPQDKLEFMFRLYDSDENGLLDQAEMDCIVNQMLHIAQYLEWDPTELR 222
Query: 399 DLLCQMLDLVKPAVDGKITLRD 420
+L +ML + DG ++L++
Sbjct: 223 PILKEMLQGMDYDRDGFVSLQE 244
>gi|124256476 diacylglycerol kinase gamma isoform 1 [Homo sapiens]
Length = 791
Score = 33.1 bits (74), Expect = 0.64
Identities = 20/82 (24%), Positives = 38/82 (46%)
Query: 339 DFVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFH 398
D V +L E R +E+ FR D D +G+L E++ + + + +P
Sbjct: 163 DVVCYLSLLETGRPQDKLEFMFRLYDSDENGLLDQAEMDCIVNQMLHIAQYLEWDPTELR 222
Query: 399 DLLCQMLDLVKPAVDGKITLRD 420
+L +ML + DG ++L++
Sbjct: 223 PILKEMLQGMDYDRDGFVSLQE 244
>gi|19923345 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 33.1 bits (74), Expect = 0.64
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 49 PEKKPGTPLPPPATSPS-SPRPLSPVPHVNNVVNAPLSIN 87
P P TPLPP + P +P P++P+P N AP+++N
Sbjct: 230 PSVPPMTPLPPMSGMPPLNPPPVAPLPAGMNGSGAPMNLN 269
>gi|23510462 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 33.1 bits (74), Expect = 0.64
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 49 PEKKPGTPLPPPATSPS-SPRPLSPVPHVNNVVNAPLSIN 87
P P TPLPP + P +P P++P+P N AP+++N
Sbjct: 230 PSVPPMTPLPPMSGMPPLNPPPVAPLPAGMNGSGAPMNLN 269
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,999,308
Number of Sequences: 37866
Number of extensions: 1098267
Number of successful extensions: 8507
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 7764
Number of HSP's gapped (non-prelim): 729
length of query: 529
length of database: 18,247,518
effective HSP length: 107
effective length of query: 422
effective length of database: 14,195,856
effective search space: 5990651232
effective search space used: 5990651232
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.