Guide to the Human Genome
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Search of human proteins with 122939155

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|122939155 nicotinamide nucleotide transhydrogenase [Homo
sapiens]
         (1086 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|122939153 nicotinamide nucleotide transhydrogenase [Homo sapi...  2122   0.0  
gi|122939155 nicotinamide nucleotide transhydrogenase [Homo sapi...  2122   0.0  
gi|89044650 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 [...    37   0.078
gi|145580604 transmembrane protein 65 [Homo sapiens]                   37   0.13 
gi|239750750 PREDICTED: hypothetical protein XP_002347524 [Homo ...    36   0.17 
gi|22748975 acyl-malonyl condensing enzyme 1 [Homo sapiens]            35   0.39 
gi|156616320 acyl-malonyl condensing enzyme 1-like 3 [Homo sapiens]    35   0.50 
gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 ...    35   0.50 
gi|50301238 glutathione reductase [Homo sapiens]                       34   0.66 
gi|156627571 sorbitol dehydrogenase [Homo sapiens]                     33   1.1  
gi|4507011 glucose transporter 4 [Homo sapiens]                        32   3.3  
gi|44680148 solute carrier family 23 (nucleobase transporters), ...    32   4.3  
gi|40316845 solute carrier family 23 (nucleobase transporters), ...    32   4.3  
gi|38570081 CUG triplet repeat, RNA-binding protein 1 isoform 2 ...    32   4.3  
gi|68303645 CUG triplet repeat, RNA binding protein 2 isoform 1 ...    31   5.6  
gi|134152680 CUG triplet repeat, RNA binding protein 2 isoform 2...    31   5.6  
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]                31   7.3  
gi|13376617 prostaglandin E synthase 2 [Homo sapiens]                  30   9.5  
gi|134152719 CUG triplet repeat, RNA binding protein 2 isoform 4...    30   9.5  
gi|46399200 testis-specific bromodomain protein [Homo sapiens]         30   9.5  
gi|46399198 testis-specific bromodomain protein [Homo sapiens]         30   9.5  
gi|13787215 sirtuin 5 isoform 2 [Homo sapiens]                         30   9.5  
gi|6912664 sirtuin 5 isoform 1 [Homo sapiens]                          30   9.5  
gi|24431975 hypothetical protein LOC26148 [Homo sapiens]               30   9.5  
gi|194239659 transmembrane and coiled-coil domains 4 [Homo sapiens]    30   9.5  

>gi|122939153 nicotinamide nucleotide transhydrogenase [Homo sapiens]
          Length = 1086

 Score = 2122 bits (5497), Expect = 0.0
 Identities = 1086/1086 (100%), Positives = 1086/1086 (100%)

Query: 1    MANLLKTVVTGCSCPLLSNLGSCKGLRVKKDFLRTFYTHQELWCKAPVKPGIPYKQLTVG 60
            MANLLKTVVTGCSCPLLSNLGSCKGLRVKKDFLRTFYTHQELWCKAPVKPGIPYKQLTVG
Sbjct: 1    MANLLKTVVTGCSCPLLSNLGSCKGLRVKKDFLRTFYTHQELWCKAPVKPGIPYKQLTVG 60

Query: 61   VPKEIFQNEKRVALSPAGVQNLVKQGFNVVVESGAGEASKFSDDHYRVAGAQIQGAKEVL 120
            VPKEIFQNEKRVALSPAGVQNLVKQGFNVVVESGAGEASKFSDDHYRVAGAQIQGAKEVL
Sbjct: 61   VPKEIFQNEKRVALSPAGVQNLVKQGFNVVVESGAGEASKFSDDHYRVAGAQIQGAKEVL 120

Query: 121  ASDLVVKVRAPMVNPTLGVHEADLLKTSGTLISFIYPAQNPELLNKLSQRKTTVLAMDQV 180
            ASDLVVKVRAPMVNPTLGVHEADLLKTSGTLISFIYPAQNPELLNKLSQRKTTVLAMDQV
Sbjct: 121  ASDLVVKVRAPMVNPTLGVHEADLLKTSGTLISFIYPAQNPELLNKLSQRKTTVLAMDQV 180

Query: 181  PRVTIAQGYDALSSMANIAGYKAVVLAANHFGRFFTGQITAAGKVPPAKILIVGGGVAGL 240
            PRVTIAQGYDALSSMANIAGYKAVVLAANHFGRFFTGQITAAGKVPPAKILIVGGGVAGL
Sbjct: 181  PRVTIAQGYDALSSMANIAGYKAVVLAANHFGRFFTGQITAAGKVPPAKILIVGGGVAGL 240

Query: 241  ASAGAAKSMGAIVRGFDTRAAALEQFKSLGAEPLEVDLKESGEGQGGYAKEMSKEFIEAE 300
            ASAGAAKSMGAIVRGFDTRAAALEQFKSLGAEPLEVDLKESGEGQGGYAKEMSKEFIEAE
Sbjct: 241  ASAGAAKSMGAIVRGFDTRAAALEQFKSLGAEPLEVDLKESGEGQGGYAKEMSKEFIEAE 300

Query: 301  MKLFAQQCKEVDILISTALIPGKKAPVLFNKEMIESMKEGSVVVDLAAEAGGNFETTKPG 360
            MKLFAQQCKEVDILISTALIPGKKAPVLFNKEMIESMKEGSVVVDLAAEAGGNFETTKPG
Sbjct: 301  MKLFAQQCKEVDILISTALIPGKKAPVLFNKEMIESMKEGSVVVDLAAEAGGNFETTKPG 360

Query: 361  ELYIHKGITHIGYTDLPSRMATQASTLYSNNITKLLKAISPDKDNFYFDVKDDFDFGTMG 420
            ELYIHKGITHIGYTDLPSRMATQASTLYSNNITKLLKAISPDKDNFYFDVKDDFDFGTMG
Sbjct: 361  ELYIHKGITHIGYTDLPSRMATQASTLYSNNITKLLKAISPDKDNFYFDVKDDFDFGTMG 420

Query: 421  HVIRGTVVMKDGKVIFPAPTPKNIPQGAPVKQKTVAELEAEKAATITPFRKTMSTASAYT 480
            HVIRGTVVMKDGKVIFPAPTPKNIPQGAPVKQKTVAELEAEKAATITPFRKTMSTASAYT
Sbjct: 421  HVIRGTVVMKDGKVIFPAPTPKNIPQGAPVKQKTVAELEAEKAATITPFRKTMSTASAYT 480

Query: 481  AGLTGILGLGIAAPNLAFSQMVTTFGLAGIVGYHTVWGVTPALHSPLMSVTNAISGLTAV 540
            AGLTGILGLGIAAPNLAFSQMVTTFGLAGIVGYHTVWGVTPALHSPLMSVTNAISGLTAV
Sbjct: 481  AGLTGILGLGIAAPNLAFSQMVTTFGLAGIVGYHTVWGVTPALHSPLMSVTNAISGLTAV 540

Query: 541  GGLALMGGHLYPSTTSQGLAALAAFISSVNIAGGFLVTQRMLDMFKRPTDPPEYNYLYLL 600
            GGLALMGGHLYPSTTSQGLAALAAFISSVNIAGGFLVTQRMLDMFKRPTDPPEYNYLYLL
Sbjct: 541  GGLALMGGHLYPSTTSQGLAALAAFISSVNIAGGFLVTQRMLDMFKRPTDPPEYNYLYLL 600

Query: 601  PAGTFVGGYLAALYSGYNIEQIMYLGSGLCCVGALAGLSTQGTARLGNALGMIGVAGGLA 660
            PAGTFVGGYLAALYSGYNIEQIMYLGSGLCCVGALAGLSTQGTARLGNALGMIGVAGGLA
Sbjct: 601  PAGTFVGGYLAALYSGYNIEQIMYLGSGLCCVGALAGLSTQGTARLGNALGMIGVAGGLA 660

Query: 661  ATLGVLKPGPELLAQMSGAMALGGTIGLTIAKRIQISDLPQLVAAFHSLVGLAAVLTCIA 720
            ATLGVLKPGPELLAQMSGAMALGGTIGLTIAKRIQISDLPQLVAAFHSLVGLAAVLTCIA
Sbjct: 661  ATLGVLKPGPELLAQMSGAMALGGTIGLTIAKRIQISDLPQLVAAFHSLVGLAAVLTCIA 720

Query: 721  EYIIEYPHFATDAAANLTKIVAYLGTYIGGVTFSGSLIAYGKLQGLLKSAPLLLPGRHLL 780
            EYIIEYPHFATDAAANLTKIVAYLGTYIGGVTFSGSLIAYGKLQGLLKSAPLLLPGRHLL
Sbjct: 721  EYIIEYPHFATDAAANLTKIVAYLGTYIGGVTFSGSLIAYGKLQGLLKSAPLLLPGRHLL 780

Query: 781  NAGLLAASVGGIIPFMVDPSFTTGITCLGSVSALSAVMGVTLTAAIGGADMPVVITVLNS 840
            NAGLLAASVGGIIPFMVDPSFTTGITCLGSVSALSAVMGVTLTAAIGGADMPVVITVLNS
Sbjct: 781  NAGLLAASVGGIIPFMVDPSFTTGITCLGSVSALSAVMGVTLTAAIGGADMPVVITVLNS 840

Query: 841  YSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSLANVILGGYGTTSTAGG 900
            YSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSLANVILGGYGTTSTAGG
Sbjct: 841  YSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSLANVILGGYGTTSTAGG 900

Query: 901  KPMEISGTHTEINLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRF 960
            KPMEISGTHTEINLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRF
Sbjct: 901  KPMEISGTHTEINLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRF 960

Query: 961  GIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDP 1020
            GIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDP
Sbjct: 961  GIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDP 1020

Query: 1021 NSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAMLLGDAKKTCDALQAKV 1080
            NSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAMLLGDAKKTCDALQAKV
Sbjct: 1021 NSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAMLLGDAKKTCDALQAKV 1080

Query: 1081 RESYQK 1086
            RESYQK
Sbjct: 1081 RESYQK 1086


>gi|122939155 nicotinamide nucleotide transhydrogenase [Homo sapiens]
          Length = 1086

 Score = 2122 bits (5497), Expect = 0.0
 Identities = 1086/1086 (100%), Positives = 1086/1086 (100%)

Query: 1    MANLLKTVVTGCSCPLLSNLGSCKGLRVKKDFLRTFYTHQELWCKAPVKPGIPYKQLTVG 60
            MANLLKTVVTGCSCPLLSNLGSCKGLRVKKDFLRTFYTHQELWCKAPVKPGIPYKQLTVG
Sbjct: 1    MANLLKTVVTGCSCPLLSNLGSCKGLRVKKDFLRTFYTHQELWCKAPVKPGIPYKQLTVG 60

Query: 61   VPKEIFQNEKRVALSPAGVQNLVKQGFNVVVESGAGEASKFSDDHYRVAGAQIQGAKEVL 120
            VPKEIFQNEKRVALSPAGVQNLVKQGFNVVVESGAGEASKFSDDHYRVAGAQIQGAKEVL
Sbjct: 61   VPKEIFQNEKRVALSPAGVQNLVKQGFNVVVESGAGEASKFSDDHYRVAGAQIQGAKEVL 120

Query: 121  ASDLVVKVRAPMVNPTLGVHEADLLKTSGTLISFIYPAQNPELLNKLSQRKTTVLAMDQV 180
            ASDLVVKVRAPMVNPTLGVHEADLLKTSGTLISFIYPAQNPELLNKLSQRKTTVLAMDQV
Sbjct: 121  ASDLVVKVRAPMVNPTLGVHEADLLKTSGTLISFIYPAQNPELLNKLSQRKTTVLAMDQV 180

Query: 181  PRVTIAQGYDALSSMANIAGYKAVVLAANHFGRFFTGQITAAGKVPPAKILIVGGGVAGL 240
            PRVTIAQGYDALSSMANIAGYKAVVLAANHFGRFFTGQITAAGKVPPAKILIVGGGVAGL
Sbjct: 181  PRVTIAQGYDALSSMANIAGYKAVVLAANHFGRFFTGQITAAGKVPPAKILIVGGGVAGL 240

Query: 241  ASAGAAKSMGAIVRGFDTRAAALEQFKSLGAEPLEVDLKESGEGQGGYAKEMSKEFIEAE 300
            ASAGAAKSMGAIVRGFDTRAAALEQFKSLGAEPLEVDLKESGEGQGGYAKEMSKEFIEAE
Sbjct: 241  ASAGAAKSMGAIVRGFDTRAAALEQFKSLGAEPLEVDLKESGEGQGGYAKEMSKEFIEAE 300

Query: 301  MKLFAQQCKEVDILISTALIPGKKAPVLFNKEMIESMKEGSVVVDLAAEAGGNFETTKPG 360
            MKLFAQQCKEVDILISTALIPGKKAPVLFNKEMIESMKEGSVVVDLAAEAGGNFETTKPG
Sbjct: 301  MKLFAQQCKEVDILISTALIPGKKAPVLFNKEMIESMKEGSVVVDLAAEAGGNFETTKPG 360

Query: 361  ELYIHKGITHIGYTDLPSRMATQASTLYSNNITKLLKAISPDKDNFYFDVKDDFDFGTMG 420
            ELYIHKGITHIGYTDLPSRMATQASTLYSNNITKLLKAISPDKDNFYFDVKDDFDFGTMG
Sbjct: 361  ELYIHKGITHIGYTDLPSRMATQASTLYSNNITKLLKAISPDKDNFYFDVKDDFDFGTMG 420

Query: 421  HVIRGTVVMKDGKVIFPAPTPKNIPQGAPVKQKTVAELEAEKAATITPFRKTMSTASAYT 480
            HVIRGTVVMKDGKVIFPAPTPKNIPQGAPVKQKTVAELEAEKAATITPFRKTMSTASAYT
Sbjct: 421  HVIRGTVVMKDGKVIFPAPTPKNIPQGAPVKQKTVAELEAEKAATITPFRKTMSTASAYT 480

Query: 481  AGLTGILGLGIAAPNLAFSQMVTTFGLAGIVGYHTVWGVTPALHSPLMSVTNAISGLTAV 540
            AGLTGILGLGIAAPNLAFSQMVTTFGLAGIVGYHTVWGVTPALHSPLMSVTNAISGLTAV
Sbjct: 481  AGLTGILGLGIAAPNLAFSQMVTTFGLAGIVGYHTVWGVTPALHSPLMSVTNAISGLTAV 540

Query: 541  GGLALMGGHLYPSTTSQGLAALAAFISSVNIAGGFLVTQRMLDMFKRPTDPPEYNYLYLL 600
            GGLALMGGHLYPSTTSQGLAALAAFISSVNIAGGFLVTQRMLDMFKRPTDPPEYNYLYLL
Sbjct: 541  GGLALMGGHLYPSTTSQGLAALAAFISSVNIAGGFLVTQRMLDMFKRPTDPPEYNYLYLL 600

Query: 601  PAGTFVGGYLAALYSGYNIEQIMYLGSGLCCVGALAGLSTQGTARLGNALGMIGVAGGLA 660
            PAGTFVGGYLAALYSGYNIEQIMYLGSGLCCVGALAGLSTQGTARLGNALGMIGVAGGLA
Sbjct: 601  PAGTFVGGYLAALYSGYNIEQIMYLGSGLCCVGALAGLSTQGTARLGNALGMIGVAGGLA 660

Query: 661  ATLGVLKPGPELLAQMSGAMALGGTIGLTIAKRIQISDLPQLVAAFHSLVGLAAVLTCIA 720
            ATLGVLKPGPELLAQMSGAMALGGTIGLTIAKRIQISDLPQLVAAFHSLVGLAAVLTCIA
Sbjct: 661  ATLGVLKPGPELLAQMSGAMALGGTIGLTIAKRIQISDLPQLVAAFHSLVGLAAVLTCIA 720

Query: 721  EYIIEYPHFATDAAANLTKIVAYLGTYIGGVTFSGSLIAYGKLQGLLKSAPLLLPGRHLL 780
            EYIIEYPHFATDAAANLTKIVAYLGTYIGGVTFSGSLIAYGKLQGLLKSAPLLLPGRHLL
Sbjct: 721  EYIIEYPHFATDAAANLTKIVAYLGTYIGGVTFSGSLIAYGKLQGLLKSAPLLLPGRHLL 780

Query: 781  NAGLLAASVGGIIPFMVDPSFTTGITCLGSVSALSAVMGVTLTAAIGGADMPVVITVLNS 840
            NAGLLAASVGGIIPFMVDPSFTTGITCLGSVSALSAVMGVTLTAAIGGADMPVVITVLNS
Sbjct: 781  NAGLLAASVGGIIPFMVDPSFTTGITCLGSVSALSAVMGVTLTAAIGGADMPVVITVLNS 840

Query: 841  YSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSLANVILGGYGTTSTAGG 900
            YSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSLANVILGGYGTTSTAGG
Sbjct: 841  YSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSLANVILGGYGTTSTAGG 900

Query: 901  KPMEISGTHTEINLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRF 960
            KPMEISGTHTEINLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRF
Sbjct: 901  KPMEISGTHTEINLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRF 960

Query: 961  GIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDP 1020
            GIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDP
Sbjct: 961  GIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDP 1020

Query: 1021 NSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAMLLGDAKKTCDALQAKV 1080
            NSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAMLLGDAKKTCDALQAKV
Sbjct: 1021 NSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAMLLGDAKKTCDALQAKV 1080

Query: 1081 RESYQK 1086
            RESYQK
Sbjct: 1081 RESYQK 1086


>gi|89044650 PREDICTED: acyl-malonyl condensing enzyme 1-like 1
           [Homo sapiens]
          Length = 338

 Score = 37.4 bits (85), Expect = 0.078
 Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 11/141 (7%)

Query: 741 VAYLGTYIGGVTFSGSLIAYGKLQGLLKSAPLLLPGRHLLNA--GLLAASVG-GIIPFMV 797
           + Y+  ++GG+  S  L+ Y  L       P  LP    L+   GLL +  G  ++   V
Sbjct: 191 LGYVQAFLGGLALSLGLLVYRSLH-----FPSCLPTVAFLSGLVGLLGSVPGLFVLQSPV 245

Query: 798 DPSFTTGITCLGSVSALSAVMGVTLTAAIGGADMPVVITVLNSYSGWALCAEGFLLNNNL 857
            PS     +C+G+V  L+ V    +  A+  A   +V  VL+S    AL  + F+L+   
Sbjct: 246 LPSDLLSWSCVGAVGILTLVSFTCVGYAVTKAHPALVCAVLHSEVVMALILQYFMLHE-- 303

Query: 858 LTIVGALIGSSGAILSYIMCV 878
            T+  + I  +G +L  I  +
Sbjct: 304 -TVAPSDIMGAGVVLGSIAII 323


>gi|145580604 transmembrane protein 65 [Homo sapiens]
          Length = 240

 Score = 36.6 bits (83), Expect = 0.13
 Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 23/117 (19%)

Query: 588 PTDPPEYNYLYLLPAGTFVG-GYL---AALYSGYNIEQIMYLGSGLCCVGALAGLSTQGT 643
           P  P +  Y+++  A  F+G G+L     + +G +IE           +G + G+ST   
Sbjct: 108 PPTPGQLRYVFIHNAIPFIGFGFLDNAIMIVAGTHIEM---------SIGIILGISTMAA 158

Query: 644 ARLGN------ALGMIGVAGGLAATLGV----LKPGPELLAQMSGAMALGGTIGLTI 690
           A LGN       LG+ G    LA+ LG+    L P    + Q   +  LG  +G+TI
Sbjct: 159 AALGNLVSDLAGLGLAGYVEALASRLGLSIPDLTPKQVDMWQTRLSTHLGKAVGVTI 215


>gi|239750750 PREDICTED: hypothetical protein XP_002347524 [Homo
           sapiens]
          Length = 202

 Score = 36.2 bits (82), Expect = 0.17
 Identities = 38/172 (22%), Positives = 68/172 (39%), Gaps = 20/172 (11%)

Query: 231 LIVGGGVAGLASAGAAKSMGAIVRGFDTRAAALEQFKSLGAEPLE-VDLKESGEGQGGYA 289
           L+  GG  GL   G +  +     GF    A +   +    + LE V    SG G  GYA
Sbjct: 23  LVESGG--GLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRSYSGNGNTGYA 80

Query: 290 KEMSKEFI--------EAEMKLFAQQCKEVDILISTALI-------PGKKAPVLFNKEMI 334
           ++               A M+L +Q+ +++D+    A         PG        +++ 
Sbjct: 81  QKFQGRVTMTRDTSTSTAYMELSSQRSEDIDVYYCCAQDTGGCSGPPGAHTTQRIAQDLQ 140

Query: 335 ESMKEGSVVVDLAAEAGGNFETTKPGELYIHKGITHIGYTDLPSRMATQAST 386
            +++    V D     G N   +KPG+ + H+G  + G+  +P +  +   T
Sbjct: 141 GAIRTPGCVEDNKGLTGHNDVLSKPGDTHNHRG--YSGHQGVPRKPGSTEDT 190


>gi|22748975 acyl-malonyl condensing enzyme 1 [Homo sapiens]
          Length = 338

 Score = 35.0 bits (79), Expect = 0.39
 Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 11/141 (7%)

Query: 741 VAYLGTYIGGVTFSGSLIAYGKLQGLLKSAPLLLPGRHLLNA--GLLAASVG-GIIPFMV 797
           + Y+  ++GG+  S  L+ Y  L       P  LP    L+   GLL +  G  ++   V
Sbjct: 191 LGYVEAFLGGLALSLRLLVYRSLH-----FPPCLPTVAFLSGLVGLLGSVPGLFVLQAPV 245

Query: 798 DPSFTTGITCLGSVSALSAVMGVTLTAAIGGADMPVVITVLNSYSGWALCAEGFLLNNNL 857
            PS     +C+G+V  L+ V    +  A+  A   +V  VL+S    AL  + ++L+   
Sbjct: 246 LPSDLLSWSCVGAVGILALVSFTCVGYAVTKAHPALVCAVLHSEVVVALILQYYMLHE-- 303

Query: 858 LTIVGALIGSSGAILSYIMCV 878
            T+  + I ++G +L  I  +
Sbjct: 304 -TVAPSDIVAAGVVLGSIAII 323


>gi|156616320 acyl-malonyl condensing enzyme 1-like 3 [Homo sapiens]
          Length = 338

 Score = 34.7 bits (78), Expect = 0.50
 Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 14/142 (9%)

Query: 741 VAYLGTYIGGVTFSGSLIAYGKLQGLLKSAPLLLPGRHLLNA--GLLAASVGGIIPFM-- 796
           + Y   ++GG+  S  L+ Y  L       P  LP    L+   GLL  SV G+      
Sbjct: 191 LGYGQAFVGGLALSLGLLVYRSLH-----FPSCLPTVAFLSGLVGLLG-SVPGLFVLQPP 244

Query: 797 VDPSFTTGITCLGSVSALSAVMGVTLTAAIGGADMPVVITVLNSYSGWALCAEGFLLNNN 856
           V PS     +C+G+V  L+ V    ++ A+  A   +V  VL+S    AL  + ++L+  
Sbjct: 245 VLPSDLPSWSCVGAVGILALVSFTCVSYAVTKAHPALVCAVLHSEVVVALILQYYMLHET 304

Query: 857 LL--TIVGA--LIGSSGAILSY 874
           +    IVGA  ++GS   I ++
Sbjct: 305 VAPSDIVGAGVVLGSIAIITAW 326


>gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1
           [Homo sapiens]
          Length = 338

 Score = 34.7 bits (78), Expect = 0.50
 Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 11/142 (7%)

Query: 740 IVAYLGTYIGGVTFSGSLIAYGKLQGLLKSAPLLLPGRHLLNA--GLLAASVG-GIIPFM 796
           I+ Y+  ++GG+  S  L+ Y  L       P  LP    L+   GLL +  G  ++   
Sbjct: 190 ILGYVQAFLGGLALSLGLLVYRSLH-----FPSCLPTVAFLSGLVGLLGSVPGLFVLQTP 244

Query: 797 VDPSFTTGITCLGSVSALSAVMGVTLTAAIGGADMPVVITVLNSYSGWALCAEGFLLNNN 856
           V PS     +C+G+V  L+ V    +  A+  A   +V  VL+S    AL  +  +L+  
Sbjct: 245 VLPSDLLSWSCVGTVGILTLVSFTCVGYAVTKAHPALVCAVLHSEVVVALILQYNMLHE- 303

Query: 857 LLTIVGALIGSSGAILSYIMCV 878
             T+  + I  +G +L  I  +
Sbjct: 304 --TVAPSDIMGAGVVLGSIAII 323


>gi|50301238 glutathione reductase [Homo sapiens]
          Length = 522

 Score = 34.3 bits (77), Expect = 0.66
 Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 7/51 (13%)

Query: 217 GQITAAGKVPPAKILIVGGGVAGLASAGAAKSMGAIVRGFDTRAAALEQFK 267
           G   AAG V     L++GGG  GLASA  A  +GA       RAA +E  K
Sbjct: 54  GPPPAAGAVASYDYLVIGGGSGGLASARRAAELGA-------RAAVVESHK 97


>gi|156627571 sorbitol dehydrogenase [Homo sapiens]
          Length = 357

 Score = 33.5 bits (75), Expect = 1.1
 Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 8/85 (9%)

Query: 229 KILIVGGGVAGLASAGAAKSMGAI-VRGFDTRAAALEQFKSLGAEPLEVDLKESG----- 282
           K+L+ G G  G+ +   AK+MGA  V   D  A  L + K +GA+ +    KES      
Sbjct: 175 KVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIAR 234

Query: 283 --EGQGGYAKEMSKEFIEAEMKLFA 305
             EGQ G   E++ E   AE  + A
Sbjct: 235 KVEGQLGCKPEVTIECTGAEASIQA 259


>gi|4507011 glucose transporter 4 [Homo sapiens]
          Length = 509

 Score = 32.0 bits (71), Expect = 3.3
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 12/88 (13%)

Query: 825 AIGGADMPVVITVLNSYSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSL 884
           ++GG     +I ++   S W       L+NN L  + G+L+G + A  SY M +     L
Sbjct: 89  SVGGMISSFLIGII---SQWLGRKRAMLVNNVLAVLGGSLMGLANAAASYEMLI-----L 140

Query: 885 ANVILGGYGTTSTAGGKPM---EISGTH 909
              ++G Y +  T+G  PM   EI+ TH
Sbjct: 141 GRFLIGAY-SGLTSGLVPMYVGEIAPTH 167


>gi|44680148 solute carrier family 23 (nucleobase transporters),
           member 2 [Homo sapiens]
          Length = 650

 Score = 31.6 bits (70), Expect = 4.3
 Identities = 15/53 (28%), Positives = 30/53 (56%)

Query: 849 EGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSLANVILGGYGTTSTAGGK 901
           +G ++ ++L+ +V  L+G  GA+L YI  + +  ++A + L G+       GK
Sbjct: 216 QGAIIMSSLIEVVIGLLGLPGALLKYIGPLTITPTVALIGLSGFQAAGERAGK 268


>gi|40316845 solute carrier family 23 (nucleobase transporters),
           member 2 [Homo sapiens]
          Length = 650

 Score = 31.6 bits (70), Expect = 4.3
 Identities = 15/53 (28%), Positives = 30/53 (56%)

Query: 849 EGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSLANVILGGYGTTSTAGGK 901
           +G ++ ++L+ +V  L+G  GA+L YI  + +  ++A + L G+       GK
Sbjct: 216 QGAIIMSSLIEVVIGLLGLPGALLKYIGPLTITPTVALIGLSGFQAAGERAGK 268


>gi|38570081 CUG triplet repeat, RNA-binding protein 1 isoform 2
           [Homo sapiens]
          Length = 483

 Score = 31.6 bits (70), Expect = 4.3
 Identities = 45/174 (25%), Positives = 65/174 (37%), Gaps = 25/174 (14%)

Query: 515 TVWGVTPALHS------PLMSVTNAISGLTAVGGLALMGGHLYPSTTSQGLAALAAFISS 568
           +VWG    L++       L+  T +   L  +  L  MGG    +   Q LAALAA  S+
Sbjct: 212 SVWGNLAGLNTLGPQYLALLQQTASSGNLNTLSSLHPMGG--LNAMQLQNLAALAAAASA 269

Query: 569 VNIAGGFLVTQRMLDMFKRPTDPPEYNYLYLLPAGTFVGGYLAALYSGYNIEQIMYLGSG 628
                    T    +     + P        L   T   G   +  S  ++  I  LG+ 
Sbjct: 270 AQN------TPSGTNALTTSSSP--------LSVLTSSAGSSPSSSSSNSVNPIASLGAL 315

Query: 629 LCCVGALAGL---STQGTARLGNALGMIGVAGGLAATLGVLKPGPELLAQMSGA 679
               GA AGL   S  G A L   LG  G++ G  +T+  L      + Q + A
Sbjct: 316 QTLAGATAGLNVGSLAGMAALNGGLGSSGLSNGTGSTMEALTQAYSGIQQYAAA 369


>gi|68303645 CUG triplet repeat, RNA binding protein 2 isoform 1
           [Homo sapiens]
          Length = 490

 Score = 31.2 bits (69), Expect = 5.6
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 13/84 (15%)

Query: 821 TLTAAIGGADMPVVITVLNSYSGWALCAEGFLLNNNLLTIVGALIGSSGAI--LSYIMCV 878
           T ++A+G    PV  +  NS +G A+         N LT +G L G +GA   L+ I  +
Sbjct: 283 TTSSALGALTSPVAASTPNSTAGAAM---------NSLTSLGTLQGLAGATVGLNNINAL 333

Query: 879 AMNRSLANV--ILGGYGTTSTAGG 900
           A+ + L+ +  + GG G T    G
Sbjct: 334 AVAQMLSGMAALNGGLGATGLTNG 357


>gi|134152680 CUG triplet repeat, RNA binding protein 2 isoform 2
           [Homo sapiens]
          Length = 521

 Score = 31.2 bits (69), Expect = 5.6
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 13/84 (15%)

Query: 821 TLTAAIGGADMPVVITVLNSYSGWALCAEGFLLNNNLLTIVGALIGSSGAI--LSYIMCV 878
           T ++A+G    PV  +  NS +G A+         N LT +G L G +GA   L+ I  +
Sbjct: 314 TTSSALGALTSPVAASTPNSTAGAAM---------NSLTSLGTLQGLAGATVGLNNINAL 364

Query: 879 AMNRSLANV--ILGGYGTTSTAGG 900
           A+ + L+ +  + GG G T    G
Sbjct: 365 AVAQMLSGMAALNGGLGATGLTNG 388


>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
          Length = 2303

 Score = 30.8 bits (68), Expect = 7.3
 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 11/101 (10%)

Query: 421  HVIRGTVVMKDGKVIFPAPTPKNIPQGAPVKQKTVAELEAEKAA------TITPFRKTMS 474
            H++R T+      +     TP++ P G P ++ + A ++ E+ A      + +P  +T  
Sbjct: 2156 HILRSTLPAT--ALPLRGSTPEDAPAGPPPRKTSDAVVQTEEVAAPKTNSSTSPSLETRE 2213

Query: 475  TASAYTAGLTGILGLGIAAPNLAFSQMVTTF---GLAGIVG 512
               A   G   +LG  +  P+LA + +   F   GL   VG
Sbjct: 2214 PPGAPAGGQLSLLGSDVDGPSLAKAPISAPFVHEGLGVAVG 2254


>gi|13376617 prostaglandin E synthase 2 [Homo sapiens]
          Length = 377

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 625 LGSGLCCVGALAGLSTQGTARLGNALGMIGVAGGLAATLGVLKPGPELLAQMSGAMALGG 684
           L  G C +    G   Q      +  G  G AGG +      K  P LL   + A+ALGG
Sbjct: 11  LWPGGCALAWRLGGRPQPLLPTQSRAGFAGAAGGPSPVAAARKGSPRLLG--AAALALGG 68

Query: 685 TIGL 688
            +GL
Sbjct: 69  ALGL 72


>gi|134152719 CUG triplet repeat, RNA binding protein 2 isoform 4
           [Homo sapiens]
          Length = 488

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 11/82 (13%)

Query: 821 TLTAAIGGADMPVVITVLNSYSGWALCAEGFLLNNNLLTIVGALIGSSGAI--LSYIMCV 878
           T ++A+G    PV  +  NS +G A+         N LT +G L G +GA   L+ I  +
Sbjct: 283 TTSSALGALTSPVAASTPNSTAGAAM---------NSLTSLGTLQGLAGATVGLNNINAL 333

Query: 879 AMNRSLANVILGGYGTTSTAGG 900
           A   +    + GG G T    G
Sbjct: 334 AGTINSMAALNGGLGATGLTNG 355


>gi|46399200 testis-specific bromodomain protein [Homo sapiens]
          Length = 947

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 20/86 (23%), Positives = 39/86 (45%)

Query: 328 LFNKEMIESMKEGSVVVDLAAEAGGNFETTKPGELYIHKGITHIGYTDLPSRMATQASTL 387
           +F ++ I S+   + +  L    G +  ++      + KG+     T  P+  A +AS+ 
Sbjct: 171 VFKQQEIPSVFPKTSISPLNVVQGASVNSSSQTAAQVTKGVKRKADTTTPATSAVKASSE 230

Query: 388 YSNNITKLLKAISPDKDNFYFDVKDD 413
           +S   T+   A+ P K+N   +V  D
Sbjct: 231 FSPTFTEKSVALPPIKENMPKNVLPD 256


>gi|46399198 testis-specific bromodomain protein [Homo sapiens]
          Length = 947

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 20/86 (23%), Positives = 39/86 (45%)

Query: 328 LFNKEMIESMKEGSVVVDLAAEAGGNFETTKPGELYIHKGITHIGYTDLPSRMATQASTL 387
           +F ++ I S+   + +  L    G +  ++      + KG+     T  P+  A +AS+ 
Sbjct: 171 VFKQQEIPSVFPKTSISPLNVVQGASVNSSSQTAAQVTKGVKRKADTTTPATSAVKASSE 230

Query: 388 YSNNITKLLKAISPDKDNFYFDVKDD 413
           +S   T+   A+ P K+N   +V  D
Sbjct: 231 FSPTFTEKSVALPPIKENMPKNVLPD 256


>gi|13787215 sirtuin 5 isoform 2 [Homo sapiens]
          Length = 299

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 990  MDEINHDFPDTDLVLVIGANDTVNSAAQEDPNSIIAGMPVLE 1031
            ++E++ +    DL LV+G +  V  AA   P     G+PV E
Sbjct: 232  LEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAE 273


>gi|6912664 sirtuin 5 isoform 1 [Homo sapiens]
          Length = 310

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 990  MDEINHDFPDTDLVLVIGANDTVNSAAQEDPNSIIAGMPVLE 1031
            ++E++ +    DL LV+G +  V  AA   P     G+PV E
Sbjct: 232  LEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAE 273


>gi|24431975 hypothetical protein LOC26148 [Homo sapiens]
          Length = 1247

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 2/94 (2%)

Query: 244 GAAKSMGAIVRGFDTRAAALEQFKSLGAEPLEVDLKESGEGQGGYAKEMSKEFIEAEMKL 303
           G     G +   F T      +  S+   P E D ++ GEG G   ++  K  ++ E+K 
Sbjct: 553 GGTTPKGLLPDSFHTETLEDTEKPSVNERPSEKDAEQEGEGGGIITRQTLKNMLDKEVKE 612

Query: 304 FAQQCKEVDILISTA--LIPGKKAPVLFNKEMIE 335
              +       I+TA   +PG++  +    +M E
Sbjct: 613 LRGEIFPSRDPITTAGQPLPGERLEIYVQSKMDE 646


>gi|194239659 transmembrane and coiled-coil domains 4 [Homo sapiens]
          Length = 634

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 8/56 (14%)

Query: 635 LAGLSTQGTARLGNALGMIGVAGGLAATLGVLKPGPELLAQMSGAMALGGTIGLTI 690
           L GL+T G   +      IGV GGLAA L  +  G   +   +GA ALG   G+ I
Sbjct: 192 LIGLATVGGGTV------IGVTGGLAAPL--VAAGAATIIGSAGAAALGSAAGIAI 239


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.136    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,475,540
Number of Sequences: 37866
Number of extensions: 1622356
Number of successful extensions: 3935
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 3913
Number of HSP's gapped (non-prelim): 31
length of query: 1086
length of database: 18,247,518
effective HSP length: 113
effective length of query: 973
effective length of database: 13,968,660
effective search space: 13591506180
effective search space used: 13591506180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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