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Search of human proteins with 32528286
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32528286 acyl-CoA thioesterase 7 isoform hBACHd [Homo
sapiens]
(329 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32528286 acyl-CoA thioesterase 7 isoform hBACHd [Homo sapiens] 655 0.0
gi|75709208 acyl-CoA thioesterase 7 isoform hBACHa [Homo sapiens] 649 0.0
gi|32528282 acyl-CoA thioesterase 7 isoform hBACHb [Homo sapiens] 645 0.0
gi|32528284 acyl-CoA thioesterase 7 isoform hBACHc [Homo sapiens] 643 0.0
gi|18640736 acyl-CoA thioesterase 12 [Homo sapiens] 89 4e-18
gi|22165400 thioesterase, adipose associated isoform BFIT2 [Homo... 79 7e-15
gi|22165355 thioesterase, adipose associated isoform BFIT1 [Homo... 79 7e-15
gi|81295407 acyl-Coenzyme A thioesterase 2, mitochondrial isofor... 46 5e-05
gi|81295404 acyl-Coenzyme A thioesterase 2, mitochondrial isofor... 46 5e-05
gi|38505292 voltage-dependent calcium channel alpha 1G subunit i... 32 1.0
gi|38505288 voltage-dependent calcium channel alpha 1G subunit i... 32 1.0
gi|38505276 voltage-dependent calcium channel alpha 1G subunit i... 32 1.0
gi|38505274 voltage-dependent calcium channel alpha 1G subunit i... 32 1.0
gi|38505272 voltage-dependent calcium channel alpha 1G subunit i... 32 1.0
gi|38505268 voltage-dependent calcium channel alpha 1G subunit i... 32 1.0
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 31 1.7
gi|20070163 voltage-dependent calcium channel alpha 1G subunit i... 30 2.3
gi|38505284 voltage-dependent calcium channel alpha 1G subunit i... 30 2.3
gi|38505282 voltage-dependent calcium channel alpha 1G subunit i... 30 2.3
gi|38505280 voltage-dependent calcium channel alpha 1G subunit i... 30 2.3
gi|38505278 voltage-dependent calcium channel alpha 1G subunit i... 30 2.3
gi|38505270 voltage-dependent calcium channel alpha 1G subunit i... 30 2.3
gi|8922438 cell division cycle associated 8 [Homo sapiens] 30 3.0
gi|188219593 TIA1 protein isoform 1 [Homo sapiens] 30 3.0
gi|188219591 TIA1 protein isoform 2 [Homo sapiens] 30 3.0
gi|116014339 olfactomedin-like 2A [Homo sapiens] 30 3.0
gi|194239705 dedicator of cytokinesis 9 isoform b [Homo sapiens] 30 3.9
gi|24308029 dedicator of cytokinesis 9 isoform a [Homo sapiens] 30 3.9
gi|67188550 CTD (carboxy-terminal domain, RNA polymerase II, pol... 29 5.0
gi|67188445 CTD (carboxy-terminal domain, RNA polymerase II, pol... 29 5.0
>gi|32528286 acyl-CoA thioesterase 7 isoform hBACHd [Homo sapiens]
Length = 329
Score = 655 bits (1691), Expect = 0.0
Identities = 329/329 (100%), Positives = 329/329 (100%)
Query: 1 MAFQLSRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTD 60
MAFQLSRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTD
Sbjct: 1 MAFQLSRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTD 60
Query: 61 FLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVD 120
FLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVD
Sbjct: 61 FLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVD 120
Query: 121 KVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLI 180
KVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLI
Sbjct: 121 KVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLI 180
Query: 181 HLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVIT 240
HLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVIT
Sbjct: 181 HLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVIT 240
Query: 241 ISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPET 300
ISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPET
Sbjct: 241 ISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPET 300
Query: 301 EDEKKRFEEGKGRYLQMKAKRQGHAEPQP 329
EDEKKRFEEGKGRYLQMKAKRQGHAEPQP
Sbjct: 301 EDEKKRFEEGKGRYLQMKAKRQGHAEPQP 329
>gi|75709208 acyl-CoA thioesterase 7 isoform hBACHa [Homo sapiens]
Length = 370
Score = 649 bits (1673), Expect = 0.0
Identities = 325/328 (99%), Positives = 326/328 (99%)
Query: 2 AFQLSRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDF 61
A Q+ RIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDF
Sbjct: 43 AIQICRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDF 102
Query: 62 LSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDK 121
LSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDK
Sbjct: 103 LSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDK 162
Query: 122 VLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIH 181
VLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIH
Sbjct: 163 VLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIH 222
Query: 182 LVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITI 241
LVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITI
Sbjct: 223 LVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITI 282
Query: 242 SGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETE 301
SGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETE
Sbjct: 283 SGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETE 342
Query: 302 DEKKRFEEGKGRYLQMKAKRQGHAEPQP 329
DEKKRFEEGKGRYLQMKAKRQGHAEPQP
Sbjct: 343 DEKKRFEEGKGRYLQMKAKRQGHAEPQP 370
Score = 74.3 bits (181), Expect = 1e-13
Identities = 43/159 (27%), Positives = 83/159 (52%), Gaps = 9/159 (5%)
Query: 169 PNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTN------IVTA 222
P+ + S + ++ P D + G VHGG +K+++E I++ RHC + A
Sbjct: 36 PDVETPSAIQICRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALA 95
Query: 223 SVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYV 282
V+ +F + G V +S +T+TS S+E++V V ++ ++ ++K A+ ++ +
Sbjct: 96 RVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPL 155
Query: 283 SLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQMKAKR 321
SL + L VP +V ++++ EEG+ RY K +R
Sbjct: 156 SLKNVDKVLEVPPVVYSRQEQE---EEGRKRYEAQKLER 191
>gi|32528282 acyl-CoA thioesterase 7 isoform hBACHb [Homo sapiens]
Length = 380
Score = 645 bits (1663), Expect = 0.0
Identities = 323/323 (100%), Positives = 323/323 (100%)
Query: 7 RIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMC 66
RIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMC
Sbjct: 58 RIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMC 117
Query: 67 IGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVP 126
IGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVP
Sbjct: 118 IGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVP 177
Query: 127 PVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPS 186
PVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPS
Sbjct: 178 PVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPS 237
Query: 187 DCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMT 246
DCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMT
Sbjct: 238 DCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMT 297
Query: 247 FTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETEDEKKR 306
FTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETEDEKKR
Sbjct: 298 FTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETEDEKKR 357
Query: 307 FEEGKGRYLQMKAKRQGHAEPQP 329
FEEGKGRYLQMKAKRQGHAEPQP
Sbjct: 358 FEEGKGRYLQMKAKRQGHAEPQP 380
Score = 72.8 bits (177), Expect = 4e-13
Identities = 42/149 (28%), Positives = 79/149 (53%), Gaps = 9/149 (6%)
Query: 5 LSRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSP 64
L ++ P D + G VHGG +K+++E I++ RHC + A V+ +F
Sbjct: 230 LIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTN------IVTASVDAINFHDK 283
Query: 65 MCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLE 124
+ G V +S +T+TS S+E++V V ++ ++ ++K A+ ++ +SL + L
Sbjct: 284 IRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLP 343
Query: 125 VPPVVYSRQEQE---EEGRKRYEAQKLER 150
VP +V ++++ EEG+ RY K +R
Sbjct: 344 VPQLVPETEDEKKRFEEGKGRYLQMKAKR 372
>gi|32528284 acyl-CoA thioesterase 7 isoform hBACHc [Homo sapiens]
Length = 350
Score = 643 bits (1659), Expect = 0.0
Identities = 322/323 (99%), Positives = 323/323 (100%)
Query: 7 RIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMC 66
+IMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMC
Sbjct: 28 QIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMC 87
Query: 67 IGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVP 126
IGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVP
Sbjct: 88 IGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVP 147
Query: 127 PVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPS 186
PVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPS
Sbjct: 148 PVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPS 207
Query: 187 DCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMT 246
DCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMT
Sbjct: 208 DCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMT 267
Query: 247 FTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETEDEKKR 306
FTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETEDEKKR
Sbjct: 268 FTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETEDEKKR 327
Query: 307 FEEGKGRYLQMKAKRQGHAEPQP 329
FEEGKGRYLQMKAKRQGHAEPQP
Sbjct: 328 FEEGKGRYLQMKAKRQGHAEPQP 350
Score = 72.8 bits (177), Expect = 4e-13
Identities = 42/149 (28%), Positives = 79/149 (53%), Gaps = 9/149 (6%)
Query: 5 LSRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSP 64
L ++ P D + G VHGG +K+++E I++ RHC + A V+ +F
Sbjct: 200 LIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTN------IVTASVDAINFHDK 253
Query: 65 MCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLE 124
+ G V +S +T+TS S+E++V V ++ ++ ++K A+ ++ +SL + L
Sbjct: 254 IRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLP 313
Query: 125 VPPVVYSRQEQE---EEGRKRYEAQKLER 150
VP +V ++++ EEG+ RY K +R
Sbjct: 314 VPQLVPETEDEKKRFEEGKGRYLQMKAKR 342
>gi|18640736 acyl-CoA thioesterase 12 [Homo sapiens]
Length = 555
Score = 89.4 bits (220), Expect = 4e-18
Identities = 79/313 (25%), Positives = 141/313 (45%), Gaps = 19/313 (6%)
Query: 5 LSRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSP 64
+S+ ++P A G + G +LK I+ + + +H G CV A V+ F
Sbjct: 11 MSQAIQPAHATARGELSAGQLLKWIDTTACLAAEKHA----GVSCVTA--SVDDIQFEET 64
Query: 65 MCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVP-------LSLK 117
+G+V + A++T S+E+ + VM +++LTG +KL + A +V + LK
Sbjct: 65 ARVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEKIHLK 124
Query: 118 NVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQS 177
V + E V ++ + + R ++E M+ + D++ + E VS +
Sbjct: 125 PVTLLTEQDHVEHNLAAERRKVRLQHEDTFNNLMKESSKFDDLI---FDEEEGAVSTRGT 181
Query: 178 SL--IHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRK 235
S+ I LV P HG GG M M+ VA I A+R C + SVD F
Sbjct: 182 SVQSIELVLPPHANHHGNTFGGQIMAWMETVATISASRLCWAHPFLKSVDMFKFRGPSTV 241
Query: 236 GCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYR-AASAFFTYVSLSQEGRSLPVP 294
G + + + T +E+ V V+A + ++ R R SAF Y + + + P
Sbjct: 242 GDRLVFTAIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRHINSAFLIYNAADDKENLITFP 301
Query: 295 QLVPETEDEKKRF 307
++ P ++D+ +R+
Sbjct: 302 RIQPISKDDFRRY 314
Score = 59.7 bits (143), Expect = 3e-09
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 167 PEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDA 226
P P V SQ+ + P+ T G + G +K +D A + A +H + VTASVD
Sbjct: 4 PAPGEVVMSQA-----IQPAHATARGELSAGQLLKWIDTTACLAAEKHAGVSCVTASVDD 58
Query: 227 INFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQ 286
I F + R G VITI ++T + SMEI + V ++ +K A + F + +
Sbjct: 59 IQFEETARVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGK 118
Query: 287 EGRSLPVPQLVPETE 301
E L L+ E +
Sbjct: 119 EKIHLKPVTLLTEQD 133
Score = 33.1 bits (74), Expect = 0.35
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 4 QLSRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLS 63
Q ++ P AN GN GG I+ +E I ++R C + L V+ F
Sbjct: 184 QSIELVLPPHANHHGNTFGGQIMAWMETVATISASRLCWAH------PFLKSVDMFKFRG 237
Query: 64 PMCIGEVAHVSAEITYTSKHSVEVQVNV 91
P +G+ +A + T + VEV V V
Sbjct: 238 PSTVGDRLVFTAIVNNTFQTCVEVGVRV 265
>gi|22165400 thioesterase, adipose associated isoform BFIT2 [Homo
sapiens]
Length = 594
Score = 78.6 bits (192), Expect = 7e-15
Identities = 73/323 (22%), Positives = 137/323 (42%), Gaps = 28/323 (8%)
Query: 4 QLSRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLS 63
Q+S+++ P N G + G +LK I+ + + RH C A ++ F
Sbjct: 48 QMSQLVLPCHTNQRGELSVGQLLKWIDTTACLSAERHAG------CPCVTASMDDIYFEH 101
Query: 64 PMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVL 123
+ +G+V ++ A++ S+EV + V SE++ + + KA +V K+
Sbjct: 102 TISVGQVVNIKAKVNRAFNSSMEVGIQVASEDLCSEKQWNVCKALATFVARREITKVKLK 161
Query: 124 EVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVL-------NPEPNTVSY-- 174
++ P EEE + A + RM + D ++ +L + E S
Sbjct: 162 QITP------RTEEEKMEHSVAAERRRMRLVY--ADTIKDLLANCAIQGDLESRDCSRMV 213
Query: 175 ----SQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFH 230
++ + LV P G GG M M+ VA I A+R C+ + +++ +F
Sbjct: 214 PAEKTRVESVELVLPPHANHQGNTFGGQIMAWMENVATIAASRLCRAHPTLKAIEMFHFR 273
Query: 231 DKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRS 290
+ G + + + SME+ V V+A + +R+ SAF T+V L + +
Sbjct: 274 GPSQVGDRLVLKAIVNNAFKHSMEVGVCVEAYRQEAETHRRH-INSAFMTFVVLDADDQP 332
Query: 291 LPVPQLVPETEDEKKRFEEGKGR 313
+P + P+ D ++R+ E R
Sbjct: 333 QLLPWIRPQPGDGERRYREASAR 355
Score = 58.5 bits (140), Expect = 8e-09
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 8/136 (5%)
Query: 169 PNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAIN 228
P V SQ LV P G + G +K +D A + A RH VTAS+D I
Sbjct: 44 PTEVQMSQ-----LVLPCHTNQRGELSVGQLLKWIDTTACLSAERHAGCPCVTASMDDIY 98
Query: 229 FHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEG 288
F I G V+ I ++ N SME+ + V ++ + S+K++ A T+V+ +E
Sbjct: 99 FEHTISVGQVVNIKAKVNRAFNSSMEVGIQVASEDL--CSEKQWNVCKALATFVA-RREI 155
Query: 289 RSLPVPQLVPETEDEK 304
+ + Q+ P TE+EK
Sbjct: 156 TKVKLKQITPRTEEEK 171
>gi|22165355 thioesterase, adipose associated isoform BFIT1 [Homo
sapiens]
Length = 607
Score = 78.6 bits (192), Expect = 7e-15
Identities = 73/323 (22%), Positives = 137/323 (42%), Gaps = 28/323 (8%)
Query: 4 QLSRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLS 63
Q+S+++ P N G + G +LK I+ + + RH C A ++ F
Sbjct: 48 QMSQLVLPCHTNQRGELSVGQLLKWIDTTACLSAERHAG------CPCVTASMDDIYFEH 101
Query: 64 PMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVL 123
+ +G+V ++ A++ S+EV + V SE++ + + KA +V K+
Sbjct: 102 TISVGQVVNIKAKVNRAFNSSMEVGIQVASEDLCSEKQWNVCKALATFVARREITKVKLK 161
Query: 124 EVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVL-------NPEPNTVSY-- 174
++ P EEE + A + RM + D ++ +L + E S
Sbjct: 162 QITP------RTEEEKMEHSVAAERRRMRLVY--ADTIKDLLANCAIQGDLESRDCSRMV 213
Query: 175 ----SQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFH 230
++ + LV P G GG M M+ VA I A+R C+ + +++ +F
Sbjct: 214 PAEKTRVESVELVLPPHANHQGNTFGGQIMAWMENVATIAASRLCRAHPTLKAIEMFHFR 273
Query: 231 DKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRS 290
+ G + + + SME+ V V+A + +R+ SAF T+V L + +
Sbjct: 274 GPSQVGDRLVLKAIVNNAFKHSMEVGVCVEAYRQEAETHRRH-INSAFMTFVVLDADDQP 332
Query: 291 LPVPQLVPETEDEKKRFEEGKGR 313
+P + P+ D ++R+ E R
Sbjct: 333 QLLPWIRPQPGDGERRYREASAR 355
Score = 58.5 bits (140), Expect = 8e-09
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 8/136 (5%)
Query: 169 PNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAIN 228
P V SQ LV P G + G +K +D A + A RH VTAS+D I
Sbjct: 44 PTEVQMSQ-----LVLPCHTNQRGELSVGQLLKWIDTTACLSAERHAGCPCVTASMDDIY 98
Query: 229 FHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEG 288
F I G V+ I ++ N SME+ + V ++ + S+K++ A T+V+ +E
Sbjct: 99 FEHTISVGQVVNIKAKVNRAFNSSMEVGIQVASEDL--CSEKQWNVCKALATFVA-RREI 155
Query: 289 RSLPVPQLVPETEDEK 304
+ + Q+ P TE+EK
Sbjct: 156 TKVKLKQITPRTEEEK 171
>gi|81295407 acyl-Coenzyme A thioesterase 2, mitochondrial isoform a
[Homo sapiens]
Length = 448
Score = 45.8 bits (107), Expect = 5e-05
Identities = 64/341 (18%), Positives = 132/341 (38%), Gaps = 47/341 (13%)
Query: 9 MRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAAL--ARVERTDFLSPMC 66
+R V V G IL+ ++ G +I H + + ++ A V++ D
Sbjct: 109 LREKYLTVQNTVRFGRILEDLDSLGVLICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSL 168
Query: 67 IGEV-AHVSAEITYTSKHSVEVQVN-----------VMSENILTGAKKLTNKATLWYVPL 114
E S +++ K S+EV++ V+ + A+ NK + PL
Sbjct: 169 SPEQDIKFSGHVSWVGKTSMEVKMQMFQLHGDEFCPVLDATFVMVARDSENKGPAFVNPL 228
Query: 115 SLKNVDKVLEVPPVVYSRQEQEEEGRK-RYEAQKLERMETKWRNGDIVQPVL--NPEPNT 171
++ ++ RQ + +GR+ + + L +M + + +P T
Sbjct: 229 IPESPEEE------ELFRQGELNKGRRIAFSSTSLLKMAPSAEERTTIHEMFLSTLDPKT 282
Query: 172 VSY--------------SQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKT 217
+S+ S+ + + P + + + GG M+ E+A A +
Sbjct: 283 ISFRSRVLPSNAVWMENSKLKSLEICHPQERNIFNRIFGGFLMRKAYELAWATACSFGGS 342
Query: 218 NIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASA 277
+VD I F + G ++ +S ++ FT N +++ V V +K++ +
Sbjct: 343 RPFVVAVDDIMFQKPVEVGSLLFLSSQVCFTQNNYIQVRV---HSEVASLQEKQHTTTNV 399
Query: 278 F-FTYVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQM 317
F FT++S + VP + P+T E + +G+ + M
Sbjct: 400 FHFTFMSEKE------VPLVFPKTYGESMLYLDGQRHFNSM 434
>gi|81295404 acyl-Coenzyme A thioesterase 2, mitochondrial isoform b
[Homo sapiens]
Length = 439
Score = 45.8 bits (107), Expect = 5e-05
Identities = 64/341 (18%), Positives = 132/341 (38%), Gaps = 47/341 (13%)
Query: 9 MRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAAL--ARVERTDFLSPMC 66
+R V V G IL+ ++ G +I H + + ++ A V++ D
Sbjct: 100 LREKYLTVQNTVRFGRILEDLDSLGVLICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSL 159
Query: 67 IGEV-AHVSAEITYTSKHSVEVQVN-----------VMSENILTGAKKLTNKATLWYVPL 114
E S +++ K S+EV++ V+ + A+ NK + PL
Sbjct: 160 SPEQDIKFSGHVSWVGKTSMEVKMQMFQLHGDEFCPVLDATFVMVARDSENKGPAFVNPL 219
Query: 115 SLKNVDKVLEVPPVVYSRQEQEEEGRK-RYEAQKLERMETKWRNGDIVQPVL--NPEPNT 171
++ ++ RQ + +GR+ + + L +M + + +P T
Sbjct: 220 IPESPEEE------ELFRQGELNKGRRIAFSSTSLLKMAPSAEERTTIHEMFLSTLDPKT 273
Query: 172 VSY--------------SQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKT 217
+S+ S+ + + P + + + GG M+ E+A A +
Sbjct: 274 ISFRSRVLPSNAVWMENSKLKSLEICHPQERNIFNRIFGGFLMRKAYELAWATACSFGGS 333
Query: 218 NIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASA 277
+VD I F + G ++ +S ++ FT N +++ V V +K++ +
Sbjct: 334 RPFVVAVDDIMFQKPVEVGSLLFLSSQVCFTQNNYIQVRV---HSEVASLQEKQHTTTNV 390
Query: 278 F-FTYVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQM 317
F FT++S + VP + P+T E + +G+ + M
Sbjct: 391 FHFTFMSEKE------VPLVFPKTYGESMLYLDGQRHFNSM 425
>gi|38505292 voltage-dependent calcium channel alpha 1G subunit
isoform 3 [Homo sapiens]
Length = 2343
Score = 31.6 bits (70), Expect = 1.0
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 132 RQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLI--HLVGPSDCT 189
RQ QEEE +R E ++L R+E K R+ + +P YS+ L+ HL CT
Sbjct: 1521 RQHQEEEEARRREEKRLRRLEKKRRSKEKQMAEAQCKPYYSDYSRFRLLVHHL-----CT 1575
Query: 190 LH 191
H
Sbjct: 1576 SH 1577
>gi|38505288 voltage-dependent calcium channel alpha 1G subunit
isoform 12 [Homo sapiens]
Length = 2250
Score = 31.6 bits (70), Expect = 1.0
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 132 RQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLI--HLVGPSDCT 189
RQ QEEE +R E ++L R+E K R+ + +P YS+ L+ HL CT
Sbjct: 1521 RQHQEEEEARRREEKRLRRLEKKRRSKEKQMAEAQCKPYYSDYSRFRLLVHHL-----CT 1575
Query: 190 LH 191
H
Sbjct: 1576 SH 1577
>gi|38505276 voltage-dependent calcium channel alpha 1G subunit
isoform 5 [Homo sapiens]
Length = 2321
Score = 31.6 bits (70), Expect = 1.0
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 132 RQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLI--HLVGPSDCT 189
RQ QEEE +R E ++L R+E K R+ + +P YS+ L+ HL CT
Sbjct: 1544 RQHQEEEEARRREEKRLRRLEKKRRSKEKQMAEAQCKPYYSDYSRFRLLVHHL-----CT 1598
Query: 190 LH 191
H
Sbjct: 1599 SH 1600
>gi|38505274 voltage-dependent calcium channel alpha 1G subunit
isoform 7 [Homo sapiens]
Length = 2298
Score = 31.6 bits (70), Expect = 1.0
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 132 RQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLI--HLVGPSDCT 189
RQ QEEE +R E ++L R+E K R+ + +P YS+ L+ HL CT
Sbjct: 1521 RQHQEEEEARRREEKRLRRLEKKRRSKEKQMAEAQCKPYYSDYSRFRLLVHHL-----CT 1575
Query: 190 LH 191
H
Sbjct: 1576 SH 1577
>gi|38505272 voltage-dependent calcium channel alpha 1G subunit
isoform 9 [Homo sapiens]
Length = 2273
Score = 31.6 bits (70), Expect = 1.0
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 132 RQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLI--HLVGPSDCT 189
RQ QEEE +R E ++L R+E K R+ + +P YS+ L+ HL CT
Sbjct: 1544 RQHQEEEEARRREEKRLRRLEKKRRSKEKQMAEAQCKPYYSDYSRFRLLVHHL-----CT 1598
Query: 190 LH 191
H
Sbjct: 1599 SH 1600
>gi|38505268 voltage-dependent calcium channel alpha 1G subunit
isoform 14 [Homo sapiens]
Length = 2171
Score = 31.6 bits (70), Expect = 1.0
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 132 RQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLI--HLVGPSDCT 189
RQ QEEE +R E ++L R+E K R+ + +P YS+ L+ HL CT
Sbjct: 1521 RQHQEEEEARRREEKRLRRLEKKRRSKEKQMAEAQCKPYYSDYSRFRLLVHHL-----CT 1575
Query: 190 LH 191
H
Sbjct: 1576 SH 1577
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 30.8 bits (68), Expect = 1.7
Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 69 EVAHVSAEITYTSKHSVEVQVNVMS--ENILTGAKKLTNKATLWYVPLSLKNVDKVLEVP 126
+V + AE+ K V ++V S E + +L +++ L K K+ +
Sbjct: 1593 QVYSMKAELETKKKELEHVNLSVKSKEEELKALEDRLESESAAKLAELKRKAEQKIAAIK 1652
Query: 127 PVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLI 180
+ S+ E++EE K+ L + TK + + +L + +V SQS +
Sbjct: 1653 KQLLSQMEEKEEQYKKGTESHLSELNTKLQEREREVHILEEKLKSVESSQSETL 1706
>gi|20070163 voltage-dependent calcium channel alpha 1G subunit
isoform 1 [Homo sapiens]
Length = 2377
Score = 30.4 bits (67), Expect = 2.3
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 132 RQEQEEEGRKRYEAQKLERMETKWRN 157
RQ QEEE +R E ++L R+E K RN
Sbjct: 1544 RQHQEEEEARRREEKRLRRLEKKRRN 1569
>gi|38505284 voltage-dependent calcium channel alpha 1G subunit
isoform 4 [Homo sapiens]
Length = 2332
Score = 30.4 bits (67), Expect = 2.3
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 132 RQEQEEEGRKRYEAQKLERMETKWRN 157
RQ QEEE +R E ++L R+E K RN
Sbjct: 1544 RQHQEEEEARRREEKRLRRLEKKRRN 1569
>gi|38505282 voltage-dependent calcium channel alpha 1G subunit
isoform 8 [Homo sapiens]
Length = 2284
Score = 30.4 bits (67), Expect = 2.3
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 132 RQEQEEEGRKRYEAQKLERMETKWRN 157
RQ QEEE +R E ++L R+E K RN
Sbjct: 1544 RQHQEEEEARRREEKRLRRLEKKRRN 1569
>gi|38505280 voltage-dependent calcium channel alpha 1G subunit
isoform 6 [Homo sapiens]
Length = 2306
Score = 30.4 bits (67), Expect = 2.3
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 132 RQEQEEEGRKRYEAQKLERMETKWRN 157
RQ QEEE +R E ++L R+E K RN
Sbjct: 1521 RQHQEEEEARRREEKRLRRLEKKRRN 1546
>gi|38505278 voltage-dependent calcium channel alpha 1G subunit
isoform 11 [Homo sapiens]
Length = 2261
Score = 30.4 bits (67), Expect = 2.3
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 132 RQEQEEEGRKRYEAQKLERMETKWRN 157
RQ QEEE +R E ++L R+E K RN
Sbjct: 1521 RQHQEEEEARRREEKRLRRLEKKRRN 1546
>gi|38505270 voltage-dependent calcium channel alpha 1G subunit
isoform 2 [Homo sapiens]
Length = 2354
Score = 30.4 bits (67), Expect = 2.3
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 132 RQEQEEEGRKRYEAQKLERMETKWRN 157
RQ QEEE +R E ++L R+E K RN
Sbjct: 1521 RQHQEEEEARRREEKRLRRLEKKRRN 1546
>gi|8922438 cell division cycle associated 8 [Homo sapiens]
Length = 280
Score = 30.0 bits (66), Expect = 3.0
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 97 LTGAKKLTNKATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLER 150
+T KLT +A PL KV++V ++ +E+EE RK + +++R
Sbjct: 93 ITEINKLTAEAI--QTPLKSAKTRKVIQVDEMIVEEEEEEENERKNLQTARVKR 144
>gi|188219593 TIA1 protein isoform 1 [Homo sapiens]
Length = 375
Score = 30.0 bits (66), Expect = 3.0
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 150 RMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPSDCTLH-GFVHGGVTMKLM 203
++ T W P E NT S +++ PS+CT++ G V G+T +LM
Sbjct: 165 QIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLM 219
>gi|188219591 TIA1 protein isoform 2 [Homo sapiens]
Length = 386
Score = 30.0 bits (66), Expect = 3.0
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 150 RMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPSDCTLH-GFVHGGVTMKLM 203
++ T W P E NT S +++ PS+CT++ G V G+T +LM
Sbjct: 176 QIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLM 230
>gi|116014339 olfactomedin-like 2A [Homo sapiens]
Length = 652
Score = 30.0 bits (66), Expect = 3.0
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 282 VSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQMKAKRQGHAEPQ 328
V S R LP P + EK R E GKG +LQ AK + A+ Q
Sbjct: 239 VQKSFADRGLPKPPKEKLLQVEKLRKESGKGSFLQPTAKPRALAQQQ 285
>gi|194239705 dedicator of cytokinesis 9 isoform b [Homo sapiens]
Length = 2068
Score = 29.6 bits (65), Expect = 3.9
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 79 YTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLK---NVDKVLEVPPVVYSRQEQ 135
+T + +EV ++ MS+ + ++L + A + + L LK +V + P+ Y+R
Sbjct: 1941 HTDLNPIEVAIDEMSKKVAE-LRQLCSSAEVDMIKLQLKLQGSVSVQVNAGPLAYARAFL 1999
Query: 136 EEEGRKRYEAQKLERMETKWR 156
++ KRY K++ ++ +R
Sbjct: 2000 DDTNTKRYPDNKVKLLKEVFR 2020
>gi|24308029 dedicator of cytokinesis 9 isoform a [Homo sapiens]
Length = 2069
Score = 29.6 bits (65), Expect = 3.9
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 79 YTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLK---NVDKVLEVPPVVYSRQEQ 135
+T + +EV ++ MS+ + ++L + A + + L LK +V + P+ Y+R
Sbjct: 1942 HTDLNPIEVAIDEMSKKVAE-LRQLCSSAEVDMIKLQLKLQGSVSVQVNAGPLAYARAFL 2000
Query: 136 EEEGRKRYEAQKLERMETKWR 156
++ KRY K++ ++ +R
Sbjct: 2001 DDTNTKRYPDNKVKLLKEVFR 2021
>gi|67188550 CTD (carboxy-terminal domain, RNA polymerase II,
polypeptide A) phosphatase, subunit 1 isoform FCP1b
[Homo sapiens]
Length = 867
Score = 29.3 bits (64), Expect = 5.0
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 6/141 (4%)
Query: 55 RVERTDFLSPMCI--GEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYV 112
R ER + +C G+V A + S V + + +L +K V
Sbjct: 84 RSERAGVVRELCAQPGQVVAPGAVLVRLEGCSHPVVMKGLCAECGQDLTQLQSKNGKQQV 143
Query: 113 PLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLN-PEPNT 171
PLS V V VP ++ S ++ E+ GR+ + Q+L R D+ Q +++ E +
Sbjct: 144 PLSTATVSMVHSVPELMVSSEQAEQLGRE--DQQRLHRNRKLVLMVDLDQTLIHTTEQHC 201
Query: 172 VSYSQSSLIHL-VGPSDCTLH 191
S + H +G + LH
Sbjct: 202 QQMSNKGIFHFQLGRGEPMLH 222
>gi|67188445 CTD (carboxy-terminal domain, RNA polymerase II,
polypeptide A) phosphatase, subunit 1 isoform FCP1a
[Homo sapiens]
Length = 961
Score = 29.3 bits (64), Expect = 5.0
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 6/141 (4%)
Query: 55 RVERTDFLSPMCI--GEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYV 112
R ER + +C G+V A + S V + + +L +K V
Sbjct: 84 RSERAGVVRELCAQPGQVVAPGAVLVRLEGCSHPVVMKGLCAECGQDLTQLQSKNGKQQV 143
Query: 113 PLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLN-PEPNT 171
PLS V V VP ++ S ++ E+ GR+ + Q+L R D+ Q +++ E +
Sbjct: 144 PLSTATVSMVHSVPELMVSSEQAEQLGRE--DQQRLHRNRKLVLMVDLDQTLIHTTEQHC 201
Query: 172 VSYSQSSLIHL-VGPSDCTLH 191
S + H +G + LH
Sbjct: 202 QQMSNKGIFHFQLGRGEPMLH 222
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,005,284
Number of Sequences: 37866
Number of extensions: 509431
Number of successful extensions: 1746
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1696
Number of HSP's gapped (non-prelim): 48
length of query: 329
length of database: 18,247,518
effective HSP length: 103
effective length of query: 226
effective length of database: 14,347,320
effective search space: 3242494320
effective search space used: 3242494320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.