Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 32129214
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32129214 neuronal calcium-binding protein 2 [Homo sapiens]
(386 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32129214 neuronal calcium-binding protein 2 [Homo sapiens] 780 0.0
gi|24308279 N-terminal EF-hand calcium binding protein 1 [Homo s... 285 6e-77
gi|149158725 N-terminal EF-hand calcium binding protein 3 isofor... 257 1e-68
gi|149158723 N-terminal EF-hand calcium binding protein 3 isofor... 246 2e-65
gi|48476342 solute carrier family 25, member 23 [Homo sapiens] 42 0.001
gi|154759259 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... 39 0.006
gi|194595509 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... 39 0.006
gi|148491091 solute carrier family 25 member 24 isoform 1 [Homo ... 38 0.014
gi|47458041 solute carrier family 25 member 24 isoform 2 [Homo s... 38 0.014
gi|7706573 stromal cell derived factor 4 isoform 1 precursor [Ho... 37 0.023
gi|18699732 stromal cell derived factor 4 isoform 2 precursor [H... 37 0.023
gi|221316624 dystonin isoform 4 [Homo sapiens] 37 0.023
gi|221316622 dystonin isoform 3 [Homo sapiens] 37 0.023
gi|221316618 dystonin isoform 2 [Homo sapiens] 37 0.023
gi|34577047 dystonin isoform 1 [Homo sapiens] 37 0.023
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens] 37 0.023
gi|4507615 troponin C, slow [Homo sapiens] 37 0.030
gi|239755176 PREDICTED: similar to solute carrier family 25, mem... 36 0.067
gi|33188443 microfilament and actin filament cross-linker protei... 36 0.067
gi|33188445 microfilament and actin filament cross-linker protei... 36 0.067
gi|56699407 solute carrier family 25, member 25 isoform c [Homo ... 36 0.067
gi|56699401 solute carrier family 25, member 25 isoform a [Homo ... 36 0.067
gi|14249340 phospholipase C, delta 4 [Homo sapiens] 35 0.15
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 34 0.19
gi|238908501 sciellin isoform 3 [Homo sapiens] 34 0.25
gi|81295809 pericentrin [Homo sapiens] 34 0.25
gi|239755174 PREDICTED: similar to solute carrier family 25, mem... 33 0.43
gi|21624641 calcium binding protein 4 [Homo sapiens] 33 0.43
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 33 0.43
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 33 0.43
>gi|32129214 neuronal calcium-binding protein 2 [Homo sapiens]
Length = 386
Score = 780 bits (2014), Expect = 0.0
Identities = 386/386 (100%), Positives = 386/386 (100%)
Query: 1 MCERAARLCRAGAHRLLREPPQQGRALGGLLRWVGARMGEPRESLAPAAPADPGPASPRG 60
MCERAARLCRAGAHRLLREPPQQGRALGGLLRWVGARMGEPRESLAPAAPADPGPASPRG
Sbjct: 1 MCERAARLCRAGAHRLLREPPQQGRALGGLLRWVGARMGEPRESLAPAAPADPGPASPRG 60
Query: 61 GTAVILDIFRRADKNDDGKLSLEEFQLFFADGVLNEKELEDLFHTIDSDNTNHVDTKELC 120
GTAVILDIFRRADKNDDGKLSLEEFQLFFADGVLNEKELEDLFHTIDSDNTNHVDTKELC
Sbjct: 61 GTAVILDIFRRADKNDDGKLSLEEFQLFFADGVLNEKELEDLFHTIDSDNTNHVDTKELC 120
Query: 121 DYFVDHMGDYEDVLASLETLNHSVLKAMGYTKKVYEGGSNVDQFVTRFLLKETANQIQSL 180
DYFVDHMGDYEDVLASLETLNHSVLKAMGYTKKVYEGGSNVDQFVTRFLLKETANQIQSL
Sbjct: 121 DYFVDHMGDYEDVLASLETLNHSVLKAMGYTKKVYEGGSNVDQFVTRFLLKETANQIQSL 180
Query: 181 LSSVESAVEAIEEQTSQLRQNHIKPSHSAAQTWCGSPTPASAPNHKLMAMEQGKTLPSAT 240
LSSVESAVEAIEEQTSQLRQNHIKPSHSAAQTWCGSPTPASAPNHKLMAMEQGKTLPSAT
Sbjct: 181 LSSVESAVEAIEEQTSQLRQNHIKPSHSAAQTWCGSPTPASAPNHKLMAMEQGKTLPSAT 240
Query: 241 EDAKEEGLEAQISRLAELIGRLESKALWFDLQQRLSDEDGTNMHLQLVRQEMAVCPEQLS 300
EDAKEEGLEAQISRLAELIGRLESKALWFDLQQRLSDEDGTNMHLQLVRQEMAVCPEQLS
Sbjct: 241 EDAKEEGLEAQISRLAELIGRLESKALWFDLQQRLSDEDGTNMHLQLVRQEMAVCPEQLS 300
Query: 301 EFLDSLRQYLRGTTGVRNCFHITAVRLSDGFTFVIYEFWETEEAWKRHLQSPLCKAFRHV 360
EFLDSLRQYLRGTTGVRNCFHITAVRLSDGFTFVIYEFWETEEAWKRHLQSPLCKAFRHV
Sbjct: 301 EFLDSLRQYLRGTTGVRNCFHITAVRLSDGFTFVIYEFWETEEAWKRHLQSPLCKAFRHV 360
Query: 361 KVDTLSQPEALSRILVPAAWCTVGRD 386
KVDTLSQPEALSRILVPAAWCTVGRD
Sbjct: 361 KVDTLSQPEALSRILVPAAWCTVGRD 386
>gi|24308279 N-terminal EF-hand calcium binding protein 1 [Homo
sapiens]
Length = 351
Score = 285 bits (728), Expect = 6e-77
Identities = 152/321 (47%), Positives = 204/321 (63%), Gaps = 2/321 (0%)
Query: 61 GTAVILDIFRRADKNDDGKLSLEEFQLFFADGVLNEKELEDLFHTIDSDNTNHVDTKELC 120
G ++ LDI RRADKNDDGKLS EEF+ +FADGVL+ +EL +LFHTID+ NTN++DT+ELC
Sbjct: 27 GMSIFLDILRRADKNDDGKLSFEEFKAYFADGVLSGEELHELFHTIDTHNTNNLDTEELC 86
Query: 121 DYFVDHMGDYEDVLASLETLNHSVLKAMGYTKKVYEGGSNVDQFVTRFLLKETANQIQSL 180
+YF H+G+YE+VLA+LE LN S+LKAMG TKK Y+ SN++QFVTRFLLKET NQ+QSL
Sbjct: 87 EYFSQHLGEYENVLAALEDLNLSILKAMGKTKKDYQEASNLEQFVTRFLLKETLNQLQSL 146
Query: 181 LSSVESAVEAIEEQTSQLRQNHIKPSHSAAQTWCGSPTPASAPNHKLMAMEQGKTLPSAT 240
+S+E A+E EEQT Q RQ KP + Q W G + H + + S
Sbjct: 147 QNSLECAMETTEEQTRQERQGPAKPEVLSIQ-WPGKRSSRRVQRHNSFSPNSPQFNVSGP 205
Query: 241 EDAKEEG-LEAQISRLAELIGRLESKALWFDLQQRLSDEDGTNMHLQLVRQEMAVCPEQL 299
+E+ QI+RL +LI RLE K L + + E T H+ LV+++M+V E L
Sbjct: 206 GLLEEDNQWMTQINRLQKLIDRLEKKDLKLEPPEEEIIEGNTKSHIMLVQRQMSVIEEDL 265
Query: 300 SEFLDSLRQYLRGTTGVRNCFHITAVRLSDGFTFVIYEFWETEEAWKRHLQSPLCKAFRH 359
EF +L+ Y+ + C I+ +LS+ ++IYEFWE W HLQ+ K F+
Sbjct: 266 EEFQLALKHYVESASSQSGCLRISIQKLSNESRYMIYEFWENSSVWNSHLQTNYSKTFQR 325
Query: 360 VKVDTLSQPEALSRILVPAAW 380
VD L PE S +LVPA+W
Sbjct: 326 SNVDFLETPELTSTMLVPASW 346
>gi|149158725 N-terminal EF-hand calcium binding protein 3 isoform 1
[Homo sapiens]
Length = 362
Score = 257 bits (656), Expect = 1e-68
Identities = 143/346 (41%), Positives = 207/346 (59%), Gaps = 14/346 (4%)
Query: 40 EPRESLAPAAPADPGPASPRGGTAVILDIFRRADKNDDGKLSLEEFQLFFADGVLNEKEL 99
+P+ P DPGPA G + D+FRRADKNDDGKLS EEFQ +FADGVL+ EL
Sbjct: 20 QPQTPRHPQLAPDPGPA----GHTLFQDVFRRADKNDDGKLSFEEFQNYFADGVLSLGEL 75
Query: 100 EDLFHTIDSDNTNHVDTKELCDYFVDHMGDYEDVLASLETLNHSVLKAMGYTKKVYEGGS 159
++LF ID T++++T++LCDYF +H+G Y VLA+LE+LN +VL AM TK YE S
Sbjct: 76 QELFSGIDGHLTDNLETEKLCDYFSEHLGVYRPVLAALESLNRAVLAAMDATKLEYERAS 135
Query: 160 NVDQFVTRFLLKETANQIQSLLSSVESAVEAIEEQTSQLRQNHIKPSHSAAQTWCGSPTP 219
VDQFVTRFLL+ET +Q+Q+L SS+E A + +E Q R + S A CGS
Sbjct: 136 KVDQFVTRFLLRETVSQLQALQSSLEGASDTLEAQAHGWRSD--AESVEAQSRLCGS--- 190
Query: 220 ASAPNHKLMAMEQGKTLPSATEDA-----KEEGLEAQISRLAELIGRLESKALWFDLQQR 274
A L ++ + T + D E Q++RL ELI +LE KA + +
Sbjct: 191 RRAGRRALRSVSRSSTWSPGSSDTGRSSEAEMQWRLQVNRLQELIDQLECKAPRLEPLRE 250
Query: 275 LSDEDGTNMHLQLVRQEMAVCPEQLSEFLDSLRQYLRGTTGVRNCFHITAVRLSDGFTFV 334
G ++H+ + ++++ V E L +F +LR Y+ T +C H++A ++ DG +F
Sbjct: 251 EDLAKGPDLHILMAQRQVQVAEEGLQDFHRALRCYVDFTGAQSHCLHVSAQKMLDGASFT 310
Query: 335 IYEFWETEEAWKRHLQSPLCKAFRHVKVDTLSQPEALSRILVPAAW 380
+YEFW+ E +W+RH QSP KAF+ + +D L P+ L+ + PA+W
Sbjct: 311 LYEFWQDEASWRRHQQSPGSKAFQRILIDHLRAPDTLTTVFFPASW 356
>gi|149158723 N-terminal EF-hand calcium binding protein 3 isoform 2
[Homo sapiens]
Length = 396
Score = 246 bits (628), Expect = 2e-65
Identities = 146/380 (38%), Positives = 212/380 (55%), Gaps = 48/380 (12%)
Query: 40 EPRESLAPAAPADPGPASPRGGTAVILDIFRRADKNDDGKLSLEEFQLFFADGVLNEKEL 99
+P+ P DPGPA G + D+FRRADKNDDGKLS EEFQ +FADGVL+ EL
Sbjct: 20 QPQTPRHPQLAPDPGPA----GHTLFQDVFRRADKNDDGKLSFEEFQNYFADGVLSLGEL 75
Query: 100 EDLFHTIDSDNTNHVDTKELCDYFVDHMGDYEDVLASLETLNHSVLKAMGYTKKVYEGGS 159
++LF ID T++++T++LCDYF +H+G Y VLA+LE+LN +VL AM TK YE S
Sbjct: 76 QELFSGIDGHLTDNLETEKLCDYFSEHLGVYRPVLAALESLNRAVLAAMDATKLEYERAS 135
Query: 160 NVDQFVTRFLLKETANQIQSLLSSVESAVEAIEEQTSQLRQNHIKPSHSAAQTWCGSPTP 219
VDQFVTRFLL+ET +Q+Q+L SS+E A + +E Q R + S A CGS
Sbjct: 136 KVDQFVTRFLLRETVSQLQALQSSLEGASDTLEAQAHGWRSD--AESVEAQSRLCGS--- 190
Query: 220 ASAPNHKLMAMEQGKTLPSATEDA-----KEEGLEAQISRLAELIGRLESKA-------- 266
A L ++ + T + D E Q++RL ELI +LE K
Sbjct: 191 RRAGRRALRSVSRSSTWSPGSSDTGRSSEAEMQWRLQVNRLQELIDQLECKVRAVGPGPH 250
Query: 267 ----LWFDLQ-------------------QRLSDED---GTNMHLQLVRQEMAVCPEQLS 300
W+ + + L +ED G ++H+ + ++++ V E L
Sbjct: 251 KGGPSWYPPEPGPCWRPGPHSVPSQAPRLEPLREEDLAKGPDLHILMAQRQVQVAEEGLQ 310
Query: 301 EFLDSLRQYLRGTTGVRNCFHITAVRLSDGFTFVIYEFWETEEAWKRHLQSPLCKAFRHV 360
+F +LR Y+ T +C H++A ++ DG +F +YEFW+ E +W+RH QSP KAF+ +
Sbjct: 311 DFHRALRCYVDFTGAQSHCLHVSAQKMLDGASFTLYEFWQDEASWRRHQQSPGSKAFQRI 370
Query: 361 KVDTLSQPEALSRILVPAAW 380
+D L P+ L+ + PA+W
Sbjct: 371 LIDHLRAPDTLTTVFFPASW 390
>gi|48476342 solute carrier family 25, member 23 [Homo sapiens]
Length = 468
Score = 41.6 bits (96), Expect = 0.001
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 65 ILDIFRRADKNDDGKLSLEEFQLFF-ADGV-LNEKELEDLFHTIDSDNTNHVDTKELCDY 122
+L +F D+N DG + + E Q F A G+ ++ ++ E + H++D D T +D +E D+
Sbjct: 82 LLLMFHSLDRNQDGHIDVSEIQQSFRALGISISLEQAEKILHSMDRDGTMTIDWQEWRDH 141
Query: 123 FVDH-MGDYEDVL 134
F+ H + + EDVL
Sbjct: 142 FLLHSLENVEDVL 154
Score = 41.2 bits (95), Expect = 0.002
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 40 EPRESLAPAAPADPGPASPRGGTAVILDIFRRADKNDDGKLSLEEFQLFFADGVLNEKEL 99
E R+ LA +P P + +G I D + DG L LEEF + + E+ L
Sbjct: 33 ELRQGLARLGGGNPDPGAQQG-------ISSEGDADPDGGLDLEEFSRYLQE---REQRL 82
Query: 100 EDLFHTIDSDNTNHVDTKELCDYF 123
+FH++D + H+D E+ F
Sbjct: 83 LLMFHSLDRNQDGHIDVSEIQQSF 106
>gi|154759259 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)
isoform 2 [Homo sapiens]
Length = 2472
Score = 39.3 bits (90), Expect = 0.006
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 68 IFRRADKNDDGKLSLEEFQLFF----ADGVLNEKELEDLFHTIDSDNTNHVD-------- 115
I D N DG +SL+E+ F + V + +E+E F + S+ +V
Sbjct: 2374 ILDTVDPNRDGHVSLQEYMAFMISRETENVKSSEEIESAFRALSSEGKPYVTKEELYQNL 2433
Query: 116 TKELCDYFVDHMGDYED 132
T+E DY V HM Y D
Sbjct: 2434 TREQADYCVSHMKPYVD 2450
Score = 30.0 bits (66), Expect = 3.7
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 13/109 (11%)
Query: 68 IFRRADKNDDGKLSLEEFQ---------LFFADGVLNEKELEDLFHTIDSDNTNHVDTKE 118
+F+ DK+ G+L+ +EF+ L + + E E + T+D + HV +E
Sbjct: 2331 MFKHFDKDKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDTVDPNRDGHVSLQE 2390
Query: 119 LCDYFVDHMGDYEDVLASLETLNHSVLKAMGYTKKVYEGGSNVDQFVTR 167
+ + + E+V +S E S +A+ K Y + Q +TR
Sbjct: 2391 YMAFMISR--ETENVKSSEEI--ESAFRALSSEGKPYVTKEELYQNLTR 2435
>gi|194595509 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)
isoform 1 [Homo sapiens]
Length = 2477
Score = 39.3 bits (90), Expect = 0.006
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 68 IFRRADKNDDGKLSLEEFQLFF----ADGVLNEKELEDLFHTIDSDNTNHVD-------- 115
I D N DG +SL+E+ F + V + +E+E F + S+ +V
Sbjct: 2379 ILDTVDPNRDGHVSLQEYMAFMISRETENVKSSEEIESAFRALSSEGKPYVTKEELYQNL 2438
Query: 116 TKELCDYFVDHMGDYED 132
T+E DY V HM Y D
Sbjct: 2439 TREQADYCVSHMKPYVD 2455
Score = 30.0 bits (66), Expect = 3.7
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 13/109 (11%)
Query: 68 IFRRADKNDDGKLSLEEFQ---------LFFADGVLNEKELEDLFHTIDSDNTNHVDTKE 118
+F+ DK+ G+L+ +EF+ L + + E E + T+D + HV +E
Sbjct: 2336 MFKHFDKDKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDTVDPNRDGHVSLQE 2395
Query: 119 LCDYFVDHMGDYEDVLASLETLNHSVLKAMGYTKKVYEGGSNVDQFVTR 167
+ + + E+V +S E S +A+ K Y + Q +TR
Sbjct: 2396 YMAFMISR--ETENVKSSEEI--ESAFRALSSEGKPYVTKEELYQNLTR 2440
>gi|148491091 solute carrier family 25 member 24 isoform 1 [Homo
sapiens]
Length = 477
Score = 38.1 bits (87), Expect = 0.014
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 68 IFRRADKNDDGKLSLEEFQLFFADGVLNEKELEDLFHTIDSDNTNHVDTKEL 119
IF D N DGKL EEF + D +EK+++ F ++D +N ++ E+
Sbjct: 63 IFTTGDVNKDGKLDFEEFMKYLKD---HEKKMKLAFKSLDKNNDGKIEASEI 111
Score = 38.1 bits (87), Expect = 0.014
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 69 FRRADKNDDGKLSLEEF--QLFFADGVLNEKELEDLFHTIDSDNTNHVDTKELCDYFV-D 125
F+ DKN+DGK+ E L ++E++ E + +ID D T VD E DYF+ +
Sbjct: 95 FKSLDKNNDGKIEASEIVQSLQTLGLTISEQQAELILQSIDVDGTMTVDWNEWRDYFLFN 154
Query: 126 HMGDYEDVL 134
+ D E+++
Sbjct: 155 PVTDIEEII 163
Score = 33.9 bits (76), Expect = 0.25
Identities = 32/144 (22%), Positives = 58/144 (40%), Gaps = 14/144 (9%)
Query: 30 LLRWVGARMGEPRESLAPAAPADPGPASPRGGTAVILDIFRRADKNDDGKLSLEEFQLFF 89
+LRW+ R+ + P A R T +F+ D+N DG + + E Q
Sbjct: 1 MLRWL-------RDFVLPTAACQDAEQPTRYET-----LFQALDRNGDGVVDIGELQEGL 48
Query: 90 AD-GV-LNEKELEDLFHTIDSDNTNHVDTKELCDYFVDHMGDYEDVLASLETLNHSVLKA 147
+ G+ L + E +F T D + +D +E Y DH + SL+ N ++A
Sbjct: 49 RNLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLKDHEKKMKLAFKSLDKNNDGKIEA 108
Query: 148 MGYTKKVYEGGSNVDQFVTRFLLK 171
+ + G + + +L+
Sbjct: 109 SEIVQSLQTLGLTISEQQAELILQ 132
>gi|47458041 solute carrier family 25 member 24 isoform 2 [Homo
sapiens]
Length = 458
Score = 38.1 bits (87), Expect = 0.014
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 68 IFRRADKNDDGKLSLEEFQLFFADGVLNEKELEDLFHTIDSDNTNHVDTKEL 119
IF D N DGKL EEF + D +EK+++ F ++D +N ++ E+
Sbjct: 44 IFTTGDVNKDGKLDFEEFMKYLKD---HEKKMKLAFKSLDKNNDGKIEASEI 92
Score = 38.1 bits (87), Expect = 0.014
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 69 FRRADKNDDGKLSLEEF--QLFFADGVLNEKELEDLFHTIDSDNTNHVDTKELCDYFV-D 125
F+ DKN+DGK+ E L ++E++ E + +ID D T VD E DYF+ +
Sbjct: 76 FKSLDKNNDGKIEASEIVQSLQTLGLTISEQQAELILQSIDVDGTMTVDWNEWRDYFLFN 135
Query: 126 HMGDYEDVL 134
+ D E+++
Sbjct: 136 PVTDIEEII 144
Score = 34.7 bits (78), Expect = 0.15
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Query: 67 DIFRRADKNDDGKLSLEEFQLFFAD--GVLNEKELEDLFHTIDSDNTNHVDTKELCDYFV 124
D+F D N DG L + E Q D + + +E + +F T D + +D +E Y
Sbjct: 7 DLFWYLDYNKDGTLDIFELQEGLEDVGAIQSLEEAKKIFTTGDVNKDGKLDFEEFMKYLK 66
Query: 125 DHMGDYEDVLASLETLNHSVLKAMGYTKKVYEGGSNVDQFVTRFLLK 171
DH + SL+ N ++A + + G + + +L+
Sbjct: 67 DHEKKMKLAFKSLDKNNDGKIEASEIVQSLQTLGLTISEQQAELILQ 113
>gi|7706573 stromal cell derived factor 4 isoform 1 precursor [Homo
sapiens]
Length = 348
Score = 37.4 bits (85), Expect = 0.023
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 6/106 (5%)
Query: 56 ASPRGGTAVILDIFRRADKNDDGKLSLEEFQLFFADGVLNE-----KELEDLFHTIDSDN 110
A PR ++ IF + D N D K+S +E Q + + +E + F +D D
Sbjct: 94 AEPRRSRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDG 153
Query: 111 TNHVDTKELCDYFVDHMGDYEDVLASLETLNHSVLKAMGYTKKVYE 156
HV E F+ G E +A LN LK T++V E
Sbjct: 154 DGHVSWDEYKVKFLASKGHSEKEVADAIRLNEE-LKVDEETQEVLE 198
>gi|18699732 stromal cell derived factor 4 isoform 2 precursor [Homo
sapiens]
Length = 362
Score = 37.4 bits (85), Expect = 0.023
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 6/106 (5%)
Query: 56 ASPRGGTAVILDIFRRADKNDDGKLSLEEFQLFFADGVLNE-----KELEDLFHTIDSDN 110
A PR ++ IF + D N D K+S +E Q + + +E + F +D D
Sbjct: 94 AEPRRSRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDG 153
Query: 111 TNHVDTKELCDYFVDHMGDYEDVLASLETLNHSVLKAMGYTKKVYE 156
HV E F+ G E +A LN LK T++V E
Sbjct: 154 DGHVSWDEYKVKFLASKGHSEKEVADAIRLNEE-LKVDEETQEVLE 198
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 37.4 bits (85), Expect = 0.023
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 65 ILDIFRRADKNDDGKLSLEEFQLFFADGVLNEK------ELEDLFHTIDSDNTNHVDTKE 118
++D FRR DK+ DGK++ +E F DG+L+ K E+ + D D ++D E
Sbjct: 5145 VMDFFRRIDKDQDGKITRQE----FIDGILSSKFPTSRLEMSAVADIFDRDGDGYIDYYE 5200
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 37.4 bits (85), Expect = 0.023
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 65 ILDIFRRADKNDDGKLSLEEFQLFFADGVLNEK------ELEDLFHTIDSDNTNHVDTKE 118
++D FRR DK+ DGK++ +E F DG+L+ K E+ + D D ++D E
Sbjct: 5156 VMDFFRRIDKDQDGKITRQE----FIDGILSSKFPTSRLEMSAVADIFDRDGDGYIDYYE 5211
>gi|221316618 dystonin isoform 2 [Homo sapiens]
Length = 5675
Score = 37.4 bits (85), Expect = 0.023
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 65 ILDIFRRADKNDDGKLSLEEFQLFFADGVLNEK------ELEDLFHTIDSDNTNHVDTKE 118
++D FRR DK+ DGK++ +E F DG+L+ K E+ + D D ++D E
Sbjct: 5294 VMDFFRRIDKDQDGKITRQE----FIDGILSSKFPTSRLEMSAVADIFDRDGDGYIDYYE 5349
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 37.4 bits (85), Expect = 0.023
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 65 ILDIFRRADKNDDGKLSLEEFQLFFADGVLNEK------ELEDLFHTIDSDNTNHVDTKE 118
++D FRR DK+ DGK++ +E F DG+L+ K E+ + D D ++D E
Sbjct: 5116 VMDFFRRIDKDQDGKITRQE----FIDGILSSKFPTSRLEMSAVADIFDRDGDGYIDYYE 5171
>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
Length = 5171
Score = 37.4 bits (85), Expect = 0.023
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 65 ILDIFRRADKNDDGKLSLEEFQLFFADGVLNEK------ELEDLFHTIDSDNTNHVDTKE 118
++D FRR DK+ DGK++ +E F DG+L+ K E+ + D D ++D E
Sbjct: 4790 VMDFFRRIDKDQDGKITRQE----FIDGILSSKFPTSRLEMSAVADIFDRDGDGYIDYYE 4845
>gi|4507615 troponin C, slow [Homo sapiens]
Length = 161
Score = 37.0 bits (84), Expect = 0.030
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 67 DIFRRADKNDDGKLSLEEFQLFF-ADG-VLNEKELEDLFHTIDSDNTNHVDTKELCDY 122
D+FR DKN DG + L+E ++ A G + E ++E+L D +N +D E ++
Sbjct: 99 DLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 156
>gi|239755176 PREDICTED: similar to solute carrier family 25, member
25 isoform 2 [Homo sapiens]
Length = 469
Score = 35.8 bits (81), Expect = 0.067
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 68 IFRRADKNDDGKLSLEEFQLFFADGVLNEKELEDLFHTIDSDNTNHVDTKEL 119
I + DK+ DG+L EEF + D +EK+L +F ++D N +D +E+
Sbjct: 55 IVQAGDKDLDGQLDFEEFVHYLQD---HEKKLRLVFKSLDKKNDGRIDAQEI 103
Score = 35.0 bits (79), Expect = 0.11
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 68 IFRRADKNDDGKLSLEEFQLFFAD-GV-LNEKELEDLFHTIDSDNTNHVDTKELCDYFVD 125
+F+ DK +DG++ +E D GV ++E++ E + ++D + T +D E DY +
Sbjct: 86 VFKSLDKKNDGRIDAQEIMQSLRDLGVKISEQQAEKILKSMDKNGTMTIDWNEWRDYHLL 145
Query: 126 H 126
H
Sbjct: 146 H 146
>gi|33188443 microfilament and actin filament cross-linker protein
isoform b [Homo sapiens]
Length = 5938
Score = 35.8 bits (81), Expect = 0.067
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 10/60 (16%)
Query: 65 ILDIFRRADKNDDGKLSLEEFQLFFADGVLNEK------ELEDLFHTIDSDNTNHVDTKE 118
++D FRR DK+ DGK++ +E F DG+L K E+ + D D ++D E
Sbjct: 5590 VMDFFRRIDKDQDGKITRQE----FIDGILASKFPTTKLEMTAVADIFDRDGDGYIDYYE 5645
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 35.8 bits (81), Expect = 0.067
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 10/60 (16%)
Query: 65 ILDIFRRADKNDDGKLSLEEFQLFFADGVLNEK------ELEDLFHTIDSDNTNHVDTKE 118
++D FRR DK+ DGK++ +E F DG+L K E+ + D D ++D E
Sbjct: 5088 VMDFFRRIDKDQDGKITRQE----FIDGILASKFPTTKLEMTAVADIFDRDGDGYIDYYE 5143
>gi|56699407 solute carrier family 25, member 25 isoform c [Homo
sapiens]
Length = 489
Score = 35.8 bits (81), Expect = 0.067
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 68 IFRRADKNDDGKLSLEEFQLFFADGVLNEKELEDLFHTIDSDNTNHVDTKEL 119
I + DK+ DG+L EEF + D +EK+L +F ++D N +D +E+
Sbjct: 75 IVQAGDKDLDGQLDFEEFVHYLQD---HEKKLRLVFKSLDKKNDGRIDAQEI 123
Score = 35.0 bits (79), Expect = 0.11
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 68 IFRRADKNDDGKLSLEEFQLFFAD-GV-LNEKELEDLFHTIDSDNTNHVDTKELCDYFVD 125
+F+ DK +DG++ +E D GV ++E++ E + ++D + T +D E DY +
Sbjct: 106 VFKSLDKKNDGRIDAQEIMQSLRDLGVKISEQQAEKILKSMDKNGTMTIDWNEWRDYHLL 165
Query: 126 H 126
H
Sbjct: 166 H 166
>gi|56699401 solute carrier family 25, member 25 isoform a [Homo
sapiens]
Length = 469
Score = 35.8 bits (81), Expect = 0.067
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 68 IFRRADKNDDGKLSLEEFQLFFADGVLNEKELEDLFHTIDSDNTNHVDTKEL 119
I + DK+ DG+L EEF + D +EK+L +F ++D N +D +E+
Sbjct: 55 IVQAGDKDLDGQLDFEEFVHYLQD---HEKKLRLVFKSLDKKNDGRIDAQEI 103
Score = 35.0 bits (79), Expect = 0.11
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 68 IFRRADKNDDGKLSLEEFQLFFAD-GV-LNEKELEDLFHTIDSDNTNHVDTKELCDYFVD 125
+F+ DK +DG++ +E D GV ++E++ E + ++D + T +D E DY +
Sbjct: 86 VFKSLDKKNDGRIDAQEIMQSLRDLGVKISEQQAEKILKSMDKNGTMTIDWNEWRDYHLL 145
Query: 126 H 126
H
Sbjct: 146 H 146
>gi|14249340 phospholipase C, delta 4 [Homo sapiens]
Length = 762
Score = 34.7 bits (78), Expect = 0.15
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 67 DIFRRADKNDDGKLSLEEFQ--LFFADGVLNEKELEDLFHTIDSDNTNHVDTKELCDYF 123
D F+R DKN DGK+S +E Q L + ++++ LF D+ + ++ +E ++
Sbjct: 141 DWFQRGDKNQDGKMSFQEVQRLLHLMNVEMDQEYAFSLFQAADTSQSGTLEGEEFVQFY 199
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 34.3 bits (77), Expect = 0.19
Identities = 48/213 (22%), Positives = 85/213 (39%), Gaps = 30/213 (14%)
Query: 95 NEKELEDLFHTIDSDNTNHVDTKELCDYFVDHMGDYEDVLASLE-TLNHSVLKAMGYTKK 153
N+++++DL + D KE ++ Y+ ++ SLE +LN K
Sbjct: 930 NKEDVDDLVSQLRQTEEQVNDLKERLKTSTSNVEQYQAMVTSLEESLNKEKQVTEEVRKN 989
Query: 154 VYEGGSNVDQFVTRF--LLKETANQIQSLLSSVESAVEAIEEQTSQLR------QNHIKP 205
+ +F T+ L E + Q L A+E++E+Q S+L+ QN ++
Sbjct: 990 IEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSVQNEVQE 1049
Query: 206 SHSAAQTWCGSPTPA---SAPNHKLMAMEQGK-----TLPSATEDAKEEGLEAQISRLAE 257
+ A T + A K+ Q K L +A +A + E Q+S++A
Sbjct: 1050 ALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKE-QVSKMAS 1108
Query: 258 LIGRLES------------KALWFDLQQRLSDE 278
+ LE KA W + ++ L DE
Sbjct: 1109 VRQHLEETTQKAESQLLECKASWEERERMLKDE 1141
>gi|238908501 sciellin isoform 3 [Homo sapiens]
Length = 646
Score = 33.9 bits (76), Expect = 0.25
Identities = 32/152 (21%), Positives = 62/152 (40%), Gaps = 3/152 (1%)
Query: 66 LDIFRRADKNDDGKLSLEEFQLFFADGVLNEKELEDLFHTIDSDNTNHVDTK--ELCDYF 123
+ + +R DKN+ G+ +LE A + EDL + + + H +T + D
Sbjct: 292 IKVNQRTDKNEKGRQNLESVAKVNARMNKTSRRSEDLDNATEVNPKGHENTTGGQSLDNL 351
Query: 124 VDHMGDYEDVLASLETLNHSVLKAMGYTKKVYEGGSNVDQFVTRFLLKETANQIQSLLSS 183
+ + + + LN+ + K T+K EGG ++D + + NQ L +
Sbjct: 352 IKVTPEVKRSNQGSKDLNNFI-KVYPGTEKSTEGGQSLDSLIKVTPERNRTNQGNQDLEN 410
Query: 184 VESAVEAIEEQTSQLRQNHIKPSHSAAQTWCG 215
+ + + + + Q HI S A + G
Sbjct: 411 LIKVIPSANKSSEQGLDEHINVSPKAVKNTDG 442
>gi|81295809 pericentrin [Homo sapiens]
Length = 3336
Score = 33.9 bits (76), Expect = 0.25
Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 10 RAGAHRLLREPPQQGRALGGLLRWVGARMGEPRESLAPAAPADPGPASPRGGTAVILDIF 69
RA ++ ++ Q RAL L A + + RE L S G L+ F
Sbjct: 388 RAELEKIFQDKNQAERALRNLESHHQAAIEKLREDLQ----------SEHGRCLEDLE-F 436
Query: 70 RRADKNDDGKLSLEEFQLFFAD-GVLNEKELEDLFHTIDSDNTNHVDTKELCDYFV---D 125
+ + + +L LE Q + D +++E+ L+ +DS T+ + EL + +
Sbjct: 437 KFKESEKEKQLELENLQASYEDLKAQSQEEIRRLWSQLDSARTSRQELSELHEQLLARTS 496
Query: 126 HMGDYEDVLASLETLNHSVLKAMG--YTKKVYEGGSNVDQFVTRFLLKETANQIQSLLSS 183
+ D E + +T + S L+ + + KK+ + + +T + + +LL S
Sbjct: 497 RVEDLEQLKQREKTQHESELEQLRIYFEKKLRDAEKTYQEDLTLLQQRLQGAREDALLDS 556
Query: 184 VESAVEAI--EEQTSQLRQNHI 203
VE + + EE+ + R++H+
Sbjct: 557 VEVGLSCVGLEEKPEKGRKDHV 578
Score = 30.4 bits (67), Expect = 2.8
Identities = 48/204 (23%), Positives = 79/204 (38%), Gaps = 18/204 (8%)
Query: 133 VLASLETLNHSVLKAMGYTKKVYEGGSNVDQFVTRFLLKETANQIQSLLSSVES------ 186
+L +LE L + + KK+ QFV LLK+ + ++L + +
Sbjct: 3015 LLHTLEELKSDLSRPTSSQKKM--AAELQFQFVD-VLLKDNVSLTKALSTVTQEKLELSR 3071
Query: 187 AVEAIEEQTSQLRQNHIKPSHSAAQTWCGSPTPASAPNHKLMAMEQGKTLPSATEDAKEE 246
AV +E+ Q PS S W T AP L + G+ P+A+E+A
Sbjct: 3072 AVSKLEKLLKHHLQKGCSPSRSERSAWKPDET---APQSSLRRPDPGRLPPAASEEAHTS 3128
Query: 247 GLEAQISRLAELIGRLESKALWFDLQQRL----SDEDGTNMHLQLVRQEMAVCPEQLSEF 302
++ + L L KAL + + L +D L ++ + V P +
Sbjct: 3129 NVKMEKLYLHYLRAESFRKALIYQKKYLLLLIGGFQDSEQETLSMI-AHLGVFPSKAERK 3187
Query: 303 LDSLRQYLRGTTGVRNCFHITAVR 326
+ S R + R T VR I +R
Sbjct: 3188 ITS-RPFTRFRTAVRVVIAILRLR 3210
>gi|239755174 PREDICTED: similar to solute carrier family 25, member
25 isoform 1 [Homo sapiens]
Length = 503
Score = 33.1 bits (74), Expect = 0.43
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 5/131 (3%)
Query: 46 APAAPADPGPASPRGGTAVILDI---FRRADKNDDGKLSLEEFQLFFADGVLN--EKELE 100
+PA+ DP + GG L + F+ D N DG L + + + L+ E EL+
Sbjct: 28 SPASVGDPCGGAICGGPDHRLRLWRLFQTLDVNRDGGLCVNDLAVGLRRLGLHRTEGELQ 87
Query: 101 DLFHTIDSDNTNHVDTKELCDYFVDHMGDYEDVLASLETLNHSVLKAMGYTKKVYEGGSN 160
+ D D +D +E Y DH V SL+ N + A + + + G
Sbjct: 88 KIVQAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVK 147
Query: 161 VDQFVTRFLLK 171
+ + +LK
Sbjct: 148 ISEQQAEKILK 158
>gi|21624641 calcium binding protein 4 [Homo sapiens]
Length = 275
Score = 33.1 bits (74), Expect = 0.43
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 43 ESLAPAAPADPGPASPRGGTAVILDIFRRADKNDDGKLSLEEFQLFFADGVLNEKELEDL 102
E A A PA PGPAS R D A + G L ++F D L +EL++L
Sbjct: 78 EGPAGAPPASPGPASSRQSHRHRPDSLHDAAQRTYGPLL---NRVFGKDRELGPEELDEL 134
Query: 103 ---FHTIDSDNTNHVDTKELCD 121
F D+D ++ +EL D
Sbjct: 135 QAAFEEFDTDRDGYISHRELGD 156
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 33.1 bits (74), Expect = 0.43
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 248 LEAQISRLAELIGRLESKALWFDLQQRLSDEDGTNMHLQLVRQEMAVCPEQLSEFLDSLR 307
LE Q L E ++ES+ + +D Q LS+E G N+ LQ++ + V ++S LD R
Sbjct: 3263 LEQQKQLLNESQQKIESQRMLYDAQ--LSEEQGRNLELQVLLESEKVRIREMSSTLDRER 3320
Query: 308 Q 308
+
Sbjct: 3321 E 3321
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 33.1 bits (74), Expect = 0.43
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 248 LEAQISRLAELIGRLESKALWFDLQQRLSDEDGTNMHLQLVRQEMAVCPEQLSEFLDSLR 307
LE Q L E ++ES+ + +D Q LS+E G N+ LQ++ + V ++S LD R
Sbjct: 3255 LEQQKQLLNESQQKIESQRMLYDAQ--LSEEQGRNLELQVLLESEKVRIREMSSTLDRER 3312
Query: 308 Q 308
+
Sbjct: 3313 E 3313
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,335,918
Number of Sequences: 37866
Number of extensions: 732128
Number of successful extensions: 4449
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 4242
Number of HSP's gapped (non-prelim): 269
length of query: 386
length of database: 18,247,518
effective HSP length: 104
effective length of query: 282
effective length of database: 14,309,454
effective search space: 4035266028
effective search space used: 4035266028
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.