Guide to the Human Genome
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Name: ZNF71 Sequence: fasta or formatted (489aa) NCBI GI: 11034821
Description:

zinc finger protein 71

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         21           1
 C cysteine            6.1         30           1
 D aspartate           2.5         12           2
 E glutamate           7.6         37           2
 F phenylalanine       3.7         18           1
 G glycine             9.8         48           2
 H histidine           6.3         31           1
 I isoleucine          3.9         19           1
 K lysine              8.4         41           2
 L leucine             4.9         24           2
 M methionine          1.0          5           1
 N asparagine          2.9         14           1
 P proline             6.1         30           2
 Q glutamine           4.5         22           1
 R arginine            5.9         29           2
 S serine              8.0         39           3
 T threonine           6.7         33           1
 V valine              3.9         19           2
 W tryptophan          0.6          3           1
 Y tyrosine            2.9         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 71 
ZFP2                  0.624   zinc finger protein 2 homolog 
ZNF135                0.503   zinc finger protein 135 
ZNF420                0.486   zinc finger protein 420 
ZNF568                0.484   zinc finger protein 568 
ZNF287                0.481   zinc finger protein 287 
LOC100287429          0.481   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.481   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.481   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.481   zinc finger protein 84 
ZNF84                 0.481   zinc finger protein 84 
LOC647678             0.480   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.480   PREDICTED: hypothetical protein XP_002343697 
LOC647678             0.478   PREDICTED: similar to zinc finger protein 347 [Homo...
ZNF502                0.477   zinc finger protein 502 
ZNF502                0.477   zinc finger protein 502 
ZNF502                0.477   zinc finger protein 502 
ZNF502                0.477   zinc finger protein 502 
ZNF16                 0.476   zinc finger protein 16 
ZNF16                 0.476   zinc finger protein 16 
ZNF167                0.474   zinc finger protein 167 isoform 1 
ZNF347                0.472   zinc finger protein 347 
ZNF665                0.470   zinc finger protein 665 
ZNF85                 0.469   zinc finger protein 85 
ZNF345                0.468   zinc finger protein 345 
ZNF585B               0.466   zinc finger protein 585B 
ZNF585A               0.466   zinc finger protein 585A 
ZNF585A               0.466   zinc finger protein 585A 
ZNF852                0.464   PREDICTED: zinc finger protein 852 
ZNF852                0.464   PREDICTED: zinc finger protein 852 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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